Metagenome Family F079352

Basic Information
Family ID	F079352
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	40 residues
Representative Sequence	HLAGIATDPRQAAALARESIDSGRAASKLDALIRETNRS
Number of Associated Samples	104
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	90.52 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Most Common Taxonomy
Group	Bacteria (97.414 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.241 % of family members)
Environment Ontology (ENVO)	Unclassified (28.448 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.586 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.28% β-sheet: 0.00% Coil/Unstructured: 56.72%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00218	IGPS	85.34
PF00697	PRAI	11.21
PF08032	SpoU_sub_bind	0.86
PF00291	PALP	0.86
PF00591	Glycos_transf_3	0.86
PF00290	Trp_syntA	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0134	Indole-3-glycerol phosphate synthase	Amino acid transport and metabolism [E]	85.34
COG0135	Phosphoribosylanthranilate isomerase	Amino acid transport and metabolism [E]	11.21
COG0159	Tryptophan synthase alpha chain	Amino acid transport and metabolism [E]	0.86
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.41 %
Unclassified	root	N/A	2.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.41 %
Unclassified	root	N/A	2.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.41 %
Unclassified	root	N/A	2.59 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	57.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
Unclassified	root	N/A	2.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	57.76 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
Unclassified	root	N/A	2.59 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	57.76 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
Unclassified	root	N/A	2.59 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.76 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
Unclassified	root	N/A	2.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.76 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
Unclassified	root	N/A	2.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.76 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
Unclassified	root	N/A	2.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_10309363	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300000955\|JGI1027J12803_105070664	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300000956\|JGI10216J12902_105798902	All Organisms → cellular organisms → Bacteria → Proteobacteria	3029	Open in IMG/M
3300001431\|F14TB_102057548	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300004153\|Ga0063455_101630902	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300004633\|Ga0066395_10237360	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300005175\|Ga0066673_10327857	All Organisms → cellular organisms → Bacteria → Proteobacteria	893	Open in IMG/M
3300005187\|Ga0066675_10948227	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005332\|Ga0066388_100802925	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300005332\|Ga0066388_107759244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	537	Open in IMG/M
3300005450\|Ga0066682_10163161	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300005536\|Ga0070697_101153535	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005549\|Ga0070704_101985371	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005555\|Ga0066692_10189355	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300005558\|Ga0066698_10059036	All Organisms → cellular organisms → Bacteria	2444	Open in IMG/M
3300005559\|Ga0066700_10166517	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300005569\|Ga0066705_10603905	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300005576\|Ga0066708_10063051	All Organisms → cellular organisms → Bacteria → Proteobacteria	2111	Open in IMG/M
3300005616\|Ga0068852_102221588	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005764\|Ga0066903_107786846	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300006028\|Ga0070717_10923668	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300006031\|Ga0066651_10637000	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300006046\|Ga0066652_100630535	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300006800\|Ga0066660_11425113	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300006800\|Ga0066660_11679091	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300009012\|Ga0066710_100378796	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300009100\|Ga0075418_10484236	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300009162\|Ga0075423_10272023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1775	Open in IMG/M
3300009176\|Ga0105242_11583145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300009545\|Ga0105237_12112647	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300010303\|Ga0134082_10471531	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300010304\|Ga0134088_10146681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1122	Open in IMG/M
3300010337\|Ga0134062_10433431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300010366\|Ga0126379_10793432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1046	Open in IMG/M
3300010373\|Ga0134128_10092598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3439	Open in IMG/M
3300010375\|Ga0105239_11294720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	841	Open in IMG/M
3300010376\|Ga0126381_101721151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	906	Open in IMG/M
3300012199\|Ga0137383_10140944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1763	Open in IMG/M
3300012202\|Ga0137363_11493545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300012207\|Ga0137381_11765459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300012211\|Ga0137377_11505036	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012285\|Ga0137370_10189098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1204	Open in IMG/M
3300012354\|Ga0137366_10822398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	659	Open in IMG/M
3300012356\|Ga0137371_10810465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300012359\|Ga0137385_10675959	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	863	Open in IMG/M
3300012360\|Ga0137375_11263141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300012917\|Ga0137395_10234960	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300012922\|Ga0137394_11204372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300012925\|Ga0137419_11880144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300012929\|Ga0137404_10010228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	6474	Open in IMG/M
3300012985\|Ga0164308_12089216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300013296\|Ga0157374_12873421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300013308\|Ga0157375_10057723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3837	Open in IMG/M
3300014154\|Ga0134075_10069139	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300015051\|Ga0137414_1202108	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300015262\|Ga0182007_10173526	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	743	Open in IMG/M
3300015357\|Ga0134072_10166958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300015359\|Ga0134085_10039410	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300015371\|Ga0132258_11386927	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1776	Open in IMG/M
3300015372\|Ga0132256_102929742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300017656\|Ga0134112_10076150	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300017657\|Ga0134074_1056884	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300017657\|Ga0134074_1337649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300018027\|Ga0184605_10163177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1006	Open in IMG/M
3300018051\|Ga0184620_10061047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1087	Open in IMG/M
3300018051\|Ga0184620_10180879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300018052\|Ga0184638_1305782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300018076\|Ga0184609_10231502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	863	Open in IMG/M
3300018076\|Ga0184609_10256828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	817	Open in IMG/M
3300018076\|Ga0184609_10433532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300018468\|Ga0066662_12728793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300019356\|Ga0173481_10524893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300019361\|Ga0173482_10521152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300019876\|Ga0193703_1009102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1480	Open in IMG/M
3300019881\|Ga0193707_1139383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	689	Open in IMG/M
3300019996\|Ga0193693_1020534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1229	Open in IMG/M
3300021073\|Ga0210378_10165433	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300021080\|Ga0210382_10071486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1405	Open in IMG/M
3300021086\|Ga0179596_10363520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300021344\|Ga0193719_10064237	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1593	Open in IMG/M
3300021344\|Ga0193719_10296076	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300021478\|Ga0210402_11308933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300025905\|Ga0207685_10704971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300025934\|Ga0207686_10227772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1350	Open in IMG/M
3300025936\|Ga0207670_10912313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736	Open in IMG/M
3300025944\|Ga0207661_11587198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300025961\|Ga0207712_10285810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1348	Open in IMG/M
3300026023\|Ga0207677_10713176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	891	Open in IMG/M
3300026332\|Ga0209803_1089347	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300026333\|Ga0209158_1049612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1720	Open in IMG/M
3300026693\|Ga0208709_102504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300027036\|Ga0207467_1008683	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	760	Open in IMG/M
3300027748\|Ga0209689_1061058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2065	Open in IMG/M
3300027748\|Ga0209689_1357458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300027787\|Ga0209074_10544181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300027874\|Ga0209465_10205552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	983	Open in IMG/M
3300027874\|Ga0209465_10268503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300028047\|Ga0209526_10693548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300028719\|Ga0307301_10307137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300028790\|Ga0307283_10036073	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300028793\|Ga0307299_10194870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300028796\|Ga0307287_10213322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300028807\|Ga0307305_10213371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	886	Open in IMG/M
3300028814\|Ga0307302_10403343	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300028828\|Ga0307312_10179852	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300028828\|Ga0307312_10696881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300031446\|Ga0170820_10233262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300031720\|Ga0307469_11239203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	706	Open in IMG/M
3300031720\|Ga0307469_11488432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300031947\|Ga0310909_11392202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300031954\|Ga0306926_12059364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300032064\|Ga0318510_10534974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300032205\|Ga0307472_102434612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.93%
Host-Associated	Host-Associated	12.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.17%
Plants	Host-Associated → Plants	12.07%
Aquatic	Environmental → Aquatic	7.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.48%
Sediment	Environmental → Aquatic → Sediment	6.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.59%
Freshwater	Environmental → Aquatic → Freshwater	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.52%
Loam	Environmental → Terrestrial → Soil → Loam	14.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026693	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN595 (SPAdes)	Environmental	Open in IMG/M
3300027036	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079352

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_103093631	3300000891	Soil	HLAGVARDLRHAAGLARESIDSGRAALKLDMLVRETNRSS*
JGI1027J12803_1050706642	3300000955	Soil	AAALHLAGVATDLRHAANMARESIDSGRAASKLEGLIQETNRS*
JGI10216J12902_1057989025	3300000956	Soil	HVAGIAADFRQAANLARESIVNGRAAAKLDALIRETNRR*
F14TB_1020575481	3300001431	Soil	AAALHLAGVAPDLMQAAILARESIASGSAAAKLDALIRETNR*
Ga0063455_1016309022	3300004153	Soil	YLTAEANDFQNAAAMARDSIDSGQAASKLQALVRETNRS*
Ga0066395_102373601	3300004633	Tropical Forest Soil	HVAGVAADFRQAANLARESIDSGRAASKLGALIRETNRK*
Ga0066673_103278571	3300005175	Soil	AAALYLAGAANDFHKATAMARESIDSGQAASKLDALIRETNRS*
Ga0066675_109482272	3300005187	Soil	YLAGVANDFQNATAMACESINSGQAVSKLEALIRETNRS*
Ga0066388_1008029251	3300005332	Tropical Forest Soil	YLAGMANDFQNAEAMARESIHTGQAASKLESLIRETNRS*
Ga0066388_1077592442	3300005332	Tropical Forest Soil	TAAALYLAGMANDFQNAEAMARESIHTGQAASKLEALIRETNRS*
Ga0066682_101631613	3300005450	Soil	VAGVADDLCKAAKLAHESIDSGRAASKLDALIRETNQDR*
Ga0066681_102460502	3300005451	Soil	INAAAALFLSGFSQDLRQAAVMARESIDNGCAASKLDVLIRETNRKQ*
Ga0070697_1011535351	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AALHVAGFAQNLYEAATVARESIDSGRAASKLDALIRETNRS*
Ga0070704_1019853711	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ALHLAGVASDLRYAASLARESIDSGRAASKLEALVRETNRSS*
Ga0066692_101893551	3300005555	Soil	AAALHLSGFAHDLCEAASFARESIDSGRATSKLDALIRETNRDR*
Ga0066698_100590361	3300005558	Soil	LHLARVATDLRQAANLARESIESGRAASKLDALVRETNRS*
Ga0066700_101665174	3300005559	Soil	INAAAALYLAGVTNDFQNATALARESIDNGHAASKLEALIGETNRS*
Ga0066705_106039052	3300005569	Soil	YLAGVANNFQNATAMACESIDSGQAVSKLEALIRETNRS*
Ga0066708_100630514	3300005576	Soil	AGVATDLRQAAGLAHESIDSGHAASKLDALIRETNRDR*
Ga0066708_109985602	3300005576	Soil	IINAAAALFLSGFSQDLRQAAVMARESIDNGCAASKLDVLIRETNRNG*
Ga0068852_1022215882	3300005616	Corn Rhizosphere	ALYLAGVANDFQNAAAMARESIDSGQAASKLAALVRETNRS*
Ga0066903_1077868462	3300005764	Tropical Forest Soil	ALYLAGAANDFQNAAAMAHESIDSGQAASKLDALIRETNRS*
Ga0070717_109236682	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LHLAGVAPNLGYAVSLARESIDSGCAVAKLDALVRETNRRP*
Ga0066651_106370001	3300006031	Soil	LAGVANDFQNATAMACESINSGQAVSKLEALIRETNRS*
Ga0066652_1006305352	3300006046	Soil	ALYLAGVANDLQNAAAMACESIDSGEATSKLDTLIRETNRS*
Ga0066660_114251132	3300006800	Soil	AAAALHVAGVADDLCKAAKLAHESIDSGRAASKLDALIRETNQDR*
Ga0066660_116790912	3300006800	Soil	AAAALHVAGVADDLCKAAKLAHESIDSGRAASKLDALIRETNRDR*
Ga0066710_1003787961	3300009012	Grasslands Soil	TDLRQAANIAGESIDSGRAASKLDALIRETNRSSS
Ga0075418_104842361	3300009100	Populus Rhizosphere	YIADVAKNFQDAAAMARTSIDGGQAASKLEALIRETNRS*
Ga0075423_102720233	3300009162	Populus Rhizosphere	LAGVANEFQNAAAMARESIDSGKAGSKLEALIRETNRS*
Ga0105242_115831451	3300009176	Miscanthus Rhizosphere	HLAGIATDPRQAAALARESIDSGRAASKLDALIRETNRS*
Ga0105237_121126472	3300009545	Corn Rhizosphere	GIATDPRQAAALARESIDSGRAASKLDALIRETNRS*
Ga0134082_104715311	3300010303	Grasslands Soil	TDLRQAANIAGESIDSGRASSKLDALIRETNRSSS*
Ga0134088_101466811	3300010304	Grasslands Soil	AAAALHLSGFAHDLCEAASFARESIDSGRATSKLDALIRETNRDR*
Ga0134109_104555881	3300010320	Grasslands Soil	NSAAALYLSGFSQDLPQATMIARESIDSGCAASKLDLLIQETNRKR*
Ga0134062_104334312	3300010337	Grasslands Soil	YLAGAANDFHKATAMARESIDSGQAASKLDALIRETNRS*
Ga0126379_107934321	3300010366	Tropical Forest Soil	DDLCKAAQLARESIDSGRAASKLDALIRETNRDR*
Ga0134128_100925985	3300010373	Terrestrial Soil	LVAAGKAEHLREGAVTAGESIDSGRAAEKLDALIRFTAR*
Ga0105239_112947202	3300010375	Corn Rhizosphere	GVARDLRHAAGLARESIDSGRAALKLDMLVRETNRSS*
Ga0126381_1017211511	3300010376	Tropical Forest Soil	LAAVAPDLRNAAEIASQSIDSGQAASKLEALIRETNRS*
Ga0137383_101409441	3300012199	Vadose Zone Soil	INAAAALHLSGFAHDLCEAASFARESIDSGRAASKLDALIRETNRDR*
Ga0137363_114935452	3300012202	Vadose Zone Soil	AAAALHVTAFAHDLPEGAAFARESIDSGRAAAKLDALIRETNRDR*
Ga0137381_117654592	3300012207	Vadose Zone Soil	APDLRQAAILARESIDSGRAASKLEALIRETNRD*
Ga0137377_115050362	3300012211	Vadose Zone Soil	AAALHVAGLASDLRQAAALARESIDSGRAVSKLEALIGETNRQK*
Ga0137370_101890981	3300012285	Vadose Zone Soil	GLASDLRQAASLARESIDSGRAESKLEALIGETNRKG*
Ga0137366_108223982	3300012354	Vadose Zone Soil	VANDFQNATAMACESINSGQAVSKLEALIRETNRS*
Ga0137371_108104651	3300012356	Vadose Zone Soil	LHLAGIAPDLRSAANLARESIDTGRAASKLDALVLETNRNP*
Ga0137385_106759592	3300012359	Vadose Zone Soil	GVANDVSQAAEFARESIDSGRAASKLDALIRETNRS*
Ga0137375_112631411	3300012360	Vadose Zone Soil	AGFTDDLYEAAIFARESIDSGRAASKLDALVRETNRE*
Ga0137395_102349603	3300012917	Vadose Zone Soil	GLASDLRQAAAHARESIDSGREASKLEALIGETNRQK*
Ga0137394_112043722	3300012922	Vadose Zone Soil	AALYLADVANDFQNATAMACESIDSGQAASKLEALIRETNRS*
Ga0137419_118801442	3300012925	Vadose Zone Soil	AAAALHVTAFAHDLPEGAAFARESIDSGRAASKLDALIRETNRDR*
Ga0137404_100102289	3300012929	Vadose Zone Soil	VAGFTDDLCEAAMFARESIDSGRAASKLDALIRETNRE*
Ga0164308_120892162	3300012985	Soil	AGVANDFQNAAAMARESIKSRQAVSKLEALIRETNRS*
Ga0157374_128734212	3300013296	Miscanthus Rhizosphere	GVANDFQNAAAMARESIDSGQAASKFEALVRETNRC*
Ga0157375_100577231	3300013308	Miscanthus Rhizosphere	LYLADVANDFQTATAMALESINNGQAASKLEALIRETNRSR*
Ga0134075_100691393	3300014154	Grasslands Soil	AAIHITGFARDLPEGVILARESIHSGRAASKLDALVRETNQDR*
Ga0137414_12021081	3300015051	Vadose Zone Soil	AAAALHLAGVAPDLRCAAGLACESIDSGQAASKLDALVRETNRRP*
Ga0182007_101735261	3300015262	Rhizosphere	ALYLADVTNDFQNAAAMARESIDSGQAASKLDALIRETNRT*
Ga0134072_101669581	3300015357	Grasslands Soil	MANDFQSAATMACESIDSGQAASKLEALIRETNRS*
Ga0134085_100394101	3300015359	Grasslands Soil	ALHLSGFAHDLCEAASFARESIDSGRAASKLDTLIRETNRDR*
Ga0132258_113869274	3300015371	Arabidopsis Rhizosphere	ADVANDFQNATAMARESIGSGKAASKLDALIRETNRS*
Ga0132256_1029297422	3300015372	Arabidopsis Rhizosphere	DVANDFQNATAMAYESIDSGQAASKLEALIRETNRS*
Ga0134112_100761501	3300017656	Grasslands Soil	FTDDLYEAAIFARESIDGGRAASKLDALIRETNRE
Ga0134074_10568843	3300017657	Grasslands Soil	ADDLGKAAKLAHESIDSGRAASKLDALICETNRDR
Ga0134074_13376492	3300017657	Grasslands Soil	GFTDDLYEAAIFARESIDSGRAASKLDALIRETNRE
Ga0184605_101631772	3300018027	Groundwater Sediment	VANDFQNATAMACESINNGQAVSKLEVLIRETNRS
Ga0184620_100610471	3300018051	Groundwater Sediment	GVARDLRHAAGLARESIDSGRAASKLDMLVRETNRSS
Ga0184620_101808792	3300018051	Groundwater Sediment	AALYLAGVATDFQNATAMARDSINSGQAASKLEALIRETNRS
Ga0184638_13057822	3300018052	Groundwater Sediment	GVAADLRHAAKLARESIDSGRAASKLDALARETNRRP
Ga0184609_102315022	3300018076	Groundwater Sediment	AAALHIAGLASDLRQAASLARESIESGRAASKLEALIGETNRKG
Ga0184609_102568282	3300018076	Groundwater Sediment	AGVAPDLMEAATLARESIASGSAAAKLEALIRKTNR
Ga0184609_104335322	3300018076	Groundwater Sediment	LHLAGVAPDLRCAADLARESIDSGQAASKMDALVRETNRSQ
Ga0066662_127287931	3300018468	Grasslands Soil	ASDLRQAAGLARESIDSGRAAAKLEALIGETNRKE
Ga0173481_105248932	3300019356	Soil	AADLRYADSLARESIDSGRAASKLEALVQETNRSP
Ga0173482_105211522	3300019361	Soil	AGVASDLRYAASLARESIDSGRAASKLEALVQETNRSL
Ga0193703_10091023	3300019876	Soil	HLAGVARDLRHAAGLARESIDSGRAASKLDMLVRETNRSS
Ga0193707_11393831	3300019881	Soil	ALYLAGVANDFQNATAMARESINSGQAASKLEALIRETNRS
Ga0193693_10205342	3300019996	Soil	GVATDLRRAANVARESIDSGRAASKLDALIRETNRS
Ga0210378_101654332	3300021073	Groundwater Sediment	LHIAGLASDLLQAASLARESIDSGRAASKLEALIGETNRKE
Ga0210382_100714864	3300021080	Groundwater Sediment	AAALHVAGFAQNLCEAATFARESIDSGRAESKLDALIRETNQS
Ga0179596_103635201	3300021086	Vadose Zone Soil	ALYLAGVANDFQNATAMACESIDSGQAVSKLQALIRETNRS
Ga0193719_100642371	3300021344	Soil	TGFAQDLPEAAAFARESIASGRAASKLDALIRETNRDQ
Ga0193719_102960761	3300021344	Soil	LAVVANDFQNATAMARESINSGQAASKLDALIRETNRS
Ga0210402_113089331	3300021478	Soil	APDLRYAVRLARESIDSGRAASKLDALVRETNRSA
Ga0207685_107049712	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VANDFQNATAMARESIDSGKAASKLEALIRETNRS
Ga0207686_102277722	3300025934	Miscanthus Rhizosphere	AAALYLAGVANDFQNAAAMARESIDSGQAASKLAALVRETNRS
Ga0207670_109123131	3300025936	Switchgrass Rhizosphere	AAVHLAGIATDPRQAAALARESIDSGRAASKLDALIRETNRS
Ga0207661_115871981	3300025944	Corn Rhizosphere	AAAALYLAGVANDFQNAAVMARESIDSGQAASKFEALVRETNRC
Ga0207712_102858101	3300025961	Switchgrass Rhizosphere	VATDRQRAAALARESIDSGRAASKLDALIRETNRS
Ga0207677_107131762	3300026023	Miscanthus Rhizosphere	QVATDRQRAAALARESIDSGRAASKLDALIRETNRS
Ga0209803_10893471	3300026332	Soil	ARDLPEGVILARESIHSGRAASKLDALVRETNQDR
Ga0209158_10496122	3300026333	Soil	ALHLSGFAHDLCEAASFARESIDSGRATSKLDALIRETNRDR
Ga0208709_1025041	3300026693	Soil	HLAGVAPDLRYAVGLARESIDSGRAASKLDALVRETNRSA
Ga0207467_10086831	3300027036	Soil	ARDLRHAAGLARESIDSGRAALKLDMLVRETNRSS
Ga0209689_10610584	3300027748	Soil	AGVTNDFQNATALARESIDNGHAASKLEALIGETNRS
Ga0209689_13574582	3300027748	Soil	GVANDLQNAAAMARESIDTGEATSKLDTLIRETNRS
Ga0209074_105441812	3300027787	Agricultural Soil	LAGFASDHRSATNLARESIDSGRAAQKLDVLIRETNRSS
Ga0209465_102055522	3300027874	Tropical Forest Soil	ALHVAGVAADFRQAANLARESIDSGRAASKLGALIRETNRK
Ga0209465_102685032	3300027874	Tropical Forest Soil	DVANDFESATAMARESIDSGQAASKLEALIRETNRS
Ga0209526_106935481	3300028047	Forest Soil	AGVAPDLHQAASLARESIDSGCAASKLDALIRETNRDR
Ga0307301_103071372	3300028719	Soil	TSDLRQAASLARESIDSGRAASKLEALIGETNRKE
Ga0307283_100360733	3300028790	Soil	AALYLADVANDFQNATSMACESIDSGQAASKLEALIRETNRS
Ga0307299_101948701	3300028793	Soil	AAAALYLAGVANDFQNAAAMAYESINSGQAVSKLEALIRETNRS
Ga0307287_102133221	3300028796	Soil	AAALHLAGVAPDLMKAATLARESIASGSAAAKLEALIRETNR
Ga0307305_102133711	3300028807	Soil	FLSGFSQDFRQAAAMARESIDSGCAASKLDDLIRETNRKE
Ga0307302_104033432	3300028814	Soil	AGVARDLRHAAGLARESIDSGRAASKLDMLVRETNRSS
Ga0307312_101798523	3300028828	Soil	ALHLAGVAPDLRCAADLARESIDSGQAASKMDALVRETNRSP
Ga0307312_106968812	3300028828	Soil	AALHLAQVATDRQRAAALARESIDSGRAASKLDALIRETNRS
Ga0170820_102332622	3300031446	Forest Soil	GVATDLRQAANIARESIDTGRAASKLDALVRETNRSAS
Ga0307469_112392032	3300031720	Hardwood Forest Soil	AAAALHIAGLASDLRQAASLARESIDSGRAASKLEALIGETNRKG
Ga0307469_114884322	3300031720	Hardwood Forest Soil	AGIATDLRHAANIARESIDSGRAASKLDALIRETNRS
Ga0310909_113922021	3300031947	Soil	ALYLADVANDLQTAAAMARESIDSGKAASKLEALIRETNRG
Ga0306926_120593642	3300031954	Soil	MAKDFRDAAAMARTSIDSGQAASKLEALIRETNRS
Ga0318510_105349742	3300032064	Soil	YLSDVVNDFQSASAMARESIDSGQAASKLEALIRETNRI
Ga0307472_1024346121	3300032205	Hardwood Forest Soil	AAAALYLAGVANDFQNAAAIARESIDNGQAASKLEVLIRETNRS

Hidden Markov Model


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