NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F079322

Metagenome Family F079322

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F079322
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 43 residues
Representative Sequence GNETFDELLKIEQQVKEHKERRERIAEENANIQRVDAQTKKYWGK
Number of Associated Samples 80
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.86 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 99.14 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (68.966 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(44.828 % of family members)
Environment Ontology (ENVO) Unclassified
(90.517 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.966 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56
1JGI24006J15134_101220723
2JGI24006J15134_102289371
3JGI24004J15324_100750454
4JGI24004J15324_101352591
5JGI24004J15324_101522221
6JGI24513J20088_10078584
7JGI24513J20088_10344801
8KVRMV2_1011485651
9Ga0075466_11011853
10Ga0075466_11327123
11Ga0075466_11465081
12Ga0098037_10960794
13Ga0098037_12899011
14Ga0098042_11404671
15Ga0098042_11479772
16Ga0098042_11521691
17Ga0098048_11929301
18Ga0098048_11997782
19Ga0098044_13396031
20Ga0098055_12881472
21Ga0098055_13407122
22Ga0070754_102216911
23Ga0070746_105002301
24Ga0098060_11422142
25Ga0098045_10629051
26Ga0098045_10853223
27Ga0098050_11101201
28Ga0098041_11722492
29Ga0098041_12260693
30Ga0098041_12512122
31Ga0098036_11307902
32Ga0098036_11355311
33Ga0098036_11547503
34Ga0098036_11631921
35Ga0098046_10661361
36Ga0098046_11055051
37Ga0075460_102066841
38Ga0070752_11987913
39Ga0099846_13042321
40Ga0110931_11661991
41Ga0110931_12405771
42Ga0114904_11717401
43Ga0115551_12750723
44Ga0115551_14745612
45Ga0115545_13356161
46Ga0114925_110302213
47Ga0115567_107911452
48Ga0114933_109498972
49Ga0098049_12068871
50Ga0098059_13869442
51Ga0114934_104155871
52Ga0151677_10288002
53Ga0160423_109584002
54Ga0160423_110972332
55Ga0163109_107911372
56Ga0181390_10829221
57Ga0181383_100533310
58Ga0181383_11629912
59Ga0181381_10504971
60Ga0181381_10743451
61Ga0181381_11295921
62Ga0181396_10489741
63Ga0187218_11500831
64Ga0181428_10984103
65Ga0181433_11366321
66Ga0181421_10924281
67Ga0181399_10723223
68Ga0181399_11531443
69Ga0181397_11516601
70Ga0181427_10959031
71Ga0181427_11178511
72Ga0181389_10787521
73Ga0181389_11449161
74Ga0181392_11848081
75Ga0181405_10440554
76Ga0181382_11799562
77Ga0181420_12426671
78Ga0181409_10630551
79Ga0181409_11170831
80Ga0181414_10715212
81Ga0181408_11383981
82Ga0181413_12618071
83Ga0181425_10941973
84Ga0181386_11463853
85Ga0181380_11829843
86Ga0181563_108358551
87Ga0211636_101904952
88Ga0211622_102822721
89Ga0211614_104600551
90Ga0213862_102369383
91Ga0207890_10331662
92Ga0208157_10652412
93Ga0208157_11423781
94Ga0208159_10558761
95Ga0208159_10672341
96Ga0208159_11005792
97Ga0208666_11466551
98Ga0208158_10170261
99Ga0208158_11354082
100Ga0209535_11754823
101Ga0208919_11837713
102Ga0208919_11898882
103Ga0208919_11975711
104Ga0209232_11782653
105Ga0209645_11159201
106Ga0209645_11162371
107Ga0209337_11513771
108Ga0209337_13056831
109Ga0208148_10558511
110Ga0208545_11653262
111Ga0183683_10513742
112Ga0185543_10606763
113Ga0183755_10974731
114Ga0307488_102162941
115Ga0315315_118682132
116Ga0314858_088429_633_776
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 88.89%    β-sheet: 0.00%    Coil/Unstructured: 11.11%
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Variant

51015202530354045GNETFDELLKIEQQVKEHKERRERIAEENANIQRVDAQTKKYWGKSequenceα-helicesβ-strandsCoilSS Conf. score
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Gene Neighborhood

Neighboring Pfam domains




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Phylogeny

NCBI Taxonomy

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Visualization
All Organisms
Unclassified
31.0%69.0%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Visualization
Marine
Deep Ocean
Surface Seawater
Deep Subsurface
Marine
Aqueous
Seawater
Sackhole Brine
Sea-Ice Brine
Seawater
Salt Marsh
Marine
Pelagic Marine
Marine Sediment
Seawater
Deep Subsurface
44.8%8.6%5.2%3.4%25.9%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24006J15134_1012207233300001450MarineEIEKQVKENKERRERIAEENANIQRVDAQVKGVKKW*
JGI24006J15134_1022893713300001450MarineVPLRGNETFTELLEIEKQVKEHKERQERIAEQSANIQRVDAQTKKYWGK*
JGI24004J15324_1007504543300001472MarineTELLEIEKQVKENKERRERIAEENANIQRVDAQTKKHWRR*
JGI24004J15324_1013525913300001472MarineNFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKHWSK*
JGI24004J15324_1015222213300001472MarineLRGNENFTELLEIEKQVKENKERRERIAEENANIQRVDAQTKKHWRR*
JGI24513J20088_100785843300001720MarineEIEKQVKENKERRERIAEQNANIQRVDAQTKKHWSK*
JGI24513J20088_103448013300001720MarineELLEIEKQVKEHKERQERIAEQSANIQRVDAQTKKYWGK*
KVRMV2_10114856513300002231Marine SedimentETFDELLKIEQQVKEYNERKLRLIDEKANIQRVDAQTKKYWGK*
Ga0075466_110118533300006029AqueousIEQQVKEHKERRERIAEQNANIQRVDAQTKKHWSK*
Ga0075466_113271233300006029AqueousGNETFTELLEIEKQVKENKERQERIAEQNANIQRVDAQTKKYWGK*
Ga0075466_114650813300006029AqueousGNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKHWGK*
Ga0098037_109607943300006737MarineGVRLRGNETFDELLEIERQVKEHKERQERIAEEKANIQRVDAQTKKYWGK*
Ga0098037_128990113300006737MarineGVPLRGNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKYWGK*
Ga0098042_114046713300006749MarineRGNETFDELLKIEQQVKEHKERKERIAEEKANIQRVDAQTKKYWGKK*
Ga0098042_114797723300006749MarineGVKLRGNETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQTKKYWGKK*
Ga0098042_115216913300006749MarineKIEQQVKEHKERQQRIAEENANIQRVDAQTKKYWGK*
Ga0098048_119293013300006752MarineKQVKENKERRERIAEEKANIQRVDAQTKKYWGKR*
Ga0098048_119977823300006752MarineGVPLRGNETFDELLKIEQQVKEHKERQERIAEQNANIQRVDAQTKKYWGK*
Ga0098044_133960313300006754MarineTFDELLKIEQQVKEHKERQERIAEQNANIQRVDAQTKGVKKW*
Ga0098055_128814723300006793MarineEKQVKENKERRERIAEENANIQRVDAQTKKYWGKK*
Ga0098055_134071223300006793MarineEIEKQVKENKERRERIAEENANIQRVDAQTKKYWGK*
Ga0070754_1022169113300006810AqueousKIEQQVKEHKERRERIAEQNANIQRVDAQTKKHWSK*
Ga0070746_1050023013300006919AqueousEKQVKENKERRERIAEENANIQRVDAQVKGEKKW*
Ga0098060_114221423300006921MarineLGVKLRGNETFDELLKIEQQVKEHKERRERIAEEKANIQRVDAQVKGVKKW*
Ga0098045_106290513300006922MarineTFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQTKKYWGK*
Ga0098045_108532233300006922MarineGVKLRGNETFDELLKIEQQVKEHKERQQRIAEQNANIQRVDAQTKKYWGK*
Ga0098050_111012013300006925MarineTFDELLKIEQQVKEHKERKERIAEEKANIQRVDAQTKKYWGK*
Ga0098041_117224923300006928MarineGNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKYWGK*
Ga0098041_122606933300006928MarineLRGNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKYWGK*
Ga0098041_125121223300006928MarineLGVRLRGNETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQTKKYWGK*
Ga0098036_113079023300006929MarineETFDELLKIEQQVKEHKERQERIAEENANIQRVDAQVKKYWK*
Ga0098036_113553113300006929MarineLRGNETFDELLKIEQQVKEHKERQERIAEENANIQRVDAQTKKYWGK*
Ga0098036_115475033300006929MarineNETFTELLEIEKQVKENKERRERIAKEKANIQRVDAQTKKYWGK*
Ga0098036_116319213300006929MarineTFTELLEIEKQVKEYNERKARIAEEKANIQRVDAQVKGVKKW*
Ga0098046_106613613300006990MarineIEQQVKEHKERQERIAEENANIQRVDAQTKKYWGK*
Ga0098046_110550513300006990MarineNETFDELLKIEQQVKEHKERKERIAEEKANIQRVDAQTKKYWGKK*
Ga0075460_1020668413300007234AqueousPLRGNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKYWGK*
Ga0070752_119879133300007345AqueousLEIEKQVKENKERRERIAEQNANIQRVDAQTKKYWGK*
Ga0099846_130423213300007542AqueousHLGVKLRGNETFDELLKIEQQVKENKERRERIAEQNANIQRVDAQTKKH*
Ga0110931_116619913300007963MarineLKIEQQVKEHKERQERIAEEKANIQRVDAQVKGVKKW*
Ga0110931_124057713300007963MarineFDELLEIERQVKEHKERQERIAEEKANIQRVDAQTKKYWGK*
Ga0114904_117174013300008218Deep OceanNETFDELLKIEQQVKEYNERKERIAEEKANIQRVDAQTKKYWGK*
Ga0115551_127507233300009193Pelagic MarineVPLRGNETFDELLKIEQQVKEHKERRERIAEENANIQRVDAQTKKHWRR*
Ga0115551_147456123300009193Pelagic MarineGNETFDELLKIEQQVKEHKERRERIAEQNANIQRVDAQTKKYWRK*
Ga0115545_133561613300009433Pelagic MarineIEKQVKENKERQERIAEQNANIQRVDAQTKKYWGK*
Ga0114925_1103022133300009488Deep SubsurfaceRGNETFTELLEIEKQVKEHKERLAEMNANIQRVDAQTKKYWGK*
Ga0115567_1079114523300009508Pelagic MarineGNETFDELLKIEQQVKEHKERRERIAEENANIQRVDAQTTKYFKGGK*
Ga0114933_1094989723300009703Deep SubsurfaceFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQTKKYWGK*
Ga0098049_120688713300010149MarineIEQQVKEHKERQERIAEEKANIQRVDAQTKKYWGK*
Ga0098059_138694423300010153MarineLEIEKQVKENKERRERIAEEKANIQRVDAQVKKYWRK*
Ga0114934_1041558713300011013Deep SubsurfaceNETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQTKKYWRK*
Ga0151677_102880023300011258MarineLRGNETFTELLEIEKQVKEYNERKERIAEQNANIQRVDAQTTKYFKGGK*
Ga0160423_1095840023300012920Surface SeawaterVPLRGNETFTELLEIEKQVKENKARIAEEKANTQRVDAQVKGVKKW*
Ga0160423_1109723323300012920Surface SeawaterRGNETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQVKKYWK*
Ga0163109_1079113723300012936Surface SeawaterFTELLEIEKQVKEYKERQERIAEEKAHIQRVDAQVKKYWGK*
Ga0181390_108292213300017719SeawaterRGNETFTELLEIEKQVKEYNERKARIAEENANIQRVDAQVKKYWK
Ga0181383_1005333103300017720SeawaterPLRGNETFTELLEIEKQVKENKERRERIAEEKANIQRVDAQTKKYWGKK
Ga0181383_116299123300017720SeawaterGNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKYWGK
Ga0181381_105049713300017726SeawaterETFTELLEIEKQVKEYNERKARIAEENANIQRVDAQVKKYWK
Ga0181381_107434513300017726SeawaterIEKQVKEHKERQERIAEEKANIQRVDAQTKKYWGKK
Ga0181381_112959213300017726SeawaterLLEIEKQVKEYNERKERIAEEKANIQRVDAQTKKYWGKK
Ga0181396_104897413300017729SeawaterIEKQVKENKERRERIAEQNANIQRVDAQTKKHWGKK
Ga0187218_115008313300017737SeawaterGVPLRGNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKYWGK
Ga0181428_109841033300017738SeawaterNETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQTKKYWGKK
Ga0181433_113663213300017739SeawaterTFDELLEIERQVREYNQRKDRIAEEKANIQRVDAQTKKYWGKK
Ga0181421_109242813300017741SeawaterHLGVPLRGNETFDELLKIEQQVKEHKERRERIAEQNANIQRVDAQTTKYFKGGK
Ga0181399_107232233300017742SeawaterTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKHWGKK
Ga0181399_115314433300017742SeawaterVPLRGNETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQVKGVKKW
Ga0181397_115166013300017744SeawaterSVRLRGNETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQTKKYWGKK
Ga0181427_109590313300017745SeawaterGNETFDELLKIEQQVKEHKERRERIAEENANIQRVDAQTKKYWGK
Ga0181427_111785113300017745SeawaterGNETFDELLKIEQQVKEHKERRERIAEENANIQRVDAQTKKYWK
Ga0181389_107875213300017746SeawaterIEKQVKEYNERKERIAEQNANIQRVDAQTKKYWGK
Ga0181389_114491613300017746SeawaterDGVPLRGNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKYWGK
Ga0181392_118480813300017749SeawaterEIEKQVKENKERRERIAEQNANIQRVDAQTKKHWGKK
Ga0181405_104405543300017750SeawaterVKLRGNETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQVKGVKKW
Ga0181382_117995623300017756SeawaterGNETFTELLEIEKQVKEHNERKERIAEQNANIQRVDAQTKKYWGK
Ga0181420_124266713300017757SeawaterPLRGNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKYWGK
Ga0181409_106305513300017758SeawaterFTELLEIEKQVKEYNERKERIAEQNANIQRVDAQTKKHWGKK
Ga0181409_111708313300017758SeawaterGNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKHWGKK
Ga0181414_107152123300017759SeawaterFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQTKKYWGKK
Ga0181408_113839813300017760SeawaterGNETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQVKKYWRK
Ga0181413_126180713300017765SeawaterNETFDELLKIEQQVKEHKERKERIAEEKANIQRVDAQTKKYWGK
Ga0181425_109419733300017771SeawaterNETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTTKYFKGGK
Ga0181386_114638533300017773SeawaterVKLRGNETFTELLEIEKQVKEYNERKERIAEQNANIQRVDAQTKKHWGKK
Ga0181380_118298433300017782SeawaterGVPLRGNETFDELLKIEQQVKEHKERIAEEKANIQRVDAQVKKYWGKK
Ga0181563_1083585513300018420Salt MarshIEQQVKEYNERKARIAEENANIQRVDAQTKKYWGKK
Ga0211636_1019049523300020400MarineLRGDETFTELLEIEKQVKEYNERKARIAEENANIQRVDAQVRGVKKW
Ga0211622_1028227213300020430MarineVPLRGNETFTELLEIEKQVKEYNERKERIAEEKANIQRVDAQTKKYWGK
Ga0211614_1046005513300020471MarineDELLKIEQQVKEYNERKARIAEENANIQRVDAQTKKYWGKK
Ga0213862_1023693833300021347SeawaterTFDELLKIEQQVKEHKERQQRIAEENANIQRVDAQVKKYWRK
Ga0207890_103316623300025079MarineRGNETFTELLEIEKQVKEHKERQERIAEQNANIQRVDAQTKKHWRR
Ga0208157_106524123300025086MarinePLQGNETFDELLKIEKQVKEHKERQERIAEEKANIQRVDAQVKKYWK
Ga0208157_114237813300025086MarineIEQQVKEHKERRERIAEENANIQRVDAQTKKYWGK
Ga0208159_105587613300025101MarineIEQQVKEHKERQQRIAEENANIQRVDAQTKKYWGKK
Ga0208159_106723413300025101MarineRGNETFDELLKIEKQVKEHKERQERIAEENANIQRVDAQVKKYWK
Ga0208159_110057923300025101MarineIEQQVKEHKERQQRIAEQNANIQRVDAQTKKYWGK
Ga0208666_114665513300025102MarineKLRGNETFDELLKIEQQVKEHKERRERIAEEKANIQRVDAQVKGVKKW
Ga0208158_101702613300025110MarineLRGNETFDELLKIEQQVKEHKERQQRIAEQNANIQRVDAQTKKYWGK
Ga0208158_113540823300025110MarineKLRGNETFDELLKIEQQVKEHKERQERIAEENANIQRVDAQTTKYFKGGK
Ga0209535_117548233300025120MarineETFTELLEIEKQVKENKERRERIAEQNANIQRVDAQTKKHWRR
Ga0208919_118377133300025128MarineFDELLEIERQVKEHKERQERIAEEKANIQRVDAQTKKYWGK
Ga0208919_118988823300025128MarineVKLRGNETFDELLKIEQQVKEHKERRERIAEEKANIQRVDAQTKKYWGK
Ga0208919_119757113300025128MarineKLRGNETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQTKKYWGKK
Ga0209232_117826533300025132MarineLLKIEQQVKEHKERQERIAEENANIQRVDAQTKKYWGK
Ga0209645_111592013300025151MarineDETFDELLKIEQQVKEHKERQERIAEENANIQRVDAQVKKYWRK
Ga0209645_111623713300025151MarineETFDELLKIEQQVKEHKERQERIAEEKANIQRVDAQVKKYWK
Ga0209337_115137713300025168MarineETFDELLKIEQQVKEHKERQERIAEQNANIQRVDAQTKKHWSK
Ga0209337_130568313300025168MarineTELLEIEKQVKENKERRERIAEENANIQRVDAQVKGVKKW
Ga0208148_105585113300025508AqueousGNETFTELLEIEKQVKENKERQERIAEQNANIQRVDAQTKKYWGK
Ga0208545_116532623300025806AqueousLKIEQQVKEHKERRERIAEQNANIQRVDAQTKKHWSK
Ga0183683_105137423300029309MarineLRGDETFDELLKIEQQVKEHKERQQRIAEENANIQRVDAQTTKYFKGGK
Ga0185543_106067633300029318MarineLGVNLRGNETFDELLKIEQQVKEHKERQARIAEEKANIQRVDAQTKKYWGK
Ga0183755_109747313300029448MarineDETFTELLEIEKQVKEYNERKARIAEENANIQRVDAQTKKYWGK
Ga0307488_1021629413300031519Sackhole BrineLEIEKQVKENKERQERIAEQNANIQRVDAQTKKHWGK
Ga0315315_1186821323300032073SeawaterFTELLEIEKQVKEYNERKERIAEQNANIQRVDAQTKKYWGK
Ga0314858_088429_633_7763300033742Sea-Ice BrineLRGNETFTELLEIEKQVKENKERQERIAEQNANIQRVDAQTKKYWGK


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