Metagenome Family F079319

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079319
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	52 residues
Representative Sequence	METVTVIKKEPTCAELVDEQWKDRQEDLKDPEYEALGFDYVEPHTWDDQPEG
Number of Associated Samples	90
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	93.97 %
% of genes from short scaffolds (< 2000 bps)	87.93 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.862 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (41.379 % of family members)
Environment Ontology (ENVO)	Unclassified (93.103 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.552 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.75% β-sheet: 0.00% Coil/Unstructured: 76.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF03592	Terminase_2	6.03

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	6.03

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
All Organisms	root	All Organisms	24.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
cellular organisms	root	All Organisms → cellular organisms	22.41 %
Viruses	superkingdom	All Organisms → Viruses	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.41 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.38 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.31 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.66 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.31 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	12.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.72 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	12.93 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	4.31 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.86 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	12.93 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	4.31 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.86 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.86 %
Herbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum	0.86 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	12.93 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	4.31 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.86 %
unclassified Herbaspirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum	0.86 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.86 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	12.93 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	4.31 %
Herbaspirillum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp.	0.86 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.86 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.86 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.86 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	12.93 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	4.31 %
Herbaspirillum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp.	0.86 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.86 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.86 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10077894	Not Available	1163	Open in IMG/M
3300000117\|DelMOWin2010_c10106540	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300001450\|JGI24006J15134_10219270	Not Available	566	Open in IMG/M
3300001460\|JGI24003J15210_10052451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1353	Open in IMG/M
3300001460\|JGI24003J15210_10073606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1056	Open in IMG/M
3300001460\|JGI24003J15210_10158600	Not Available	570	Open in IMG/M
3300001472\|JGI24004J15324_10039935	Not Available	1457	Open in IMG/M
3300001589\|JGI24005J15628_10058761	Not Available	1445	Open in IMG/M
3300001589\|JGI24005J15628_10069343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1282	Open in IMG/M
3300002488\|JGI25128J35275_1082108	Not Available	661	Open in IMG/M
3300006027\|Ga0075462_10135932	Not Available	754	Open in IMG/M
3300006735\|Ga0098038_1240410	Not Available	574	Open in IMG/M
3300006735\|Ga0098038_1262221	Not Available	543	Open in IMG/M
3300006738\|Ga0098035_1128237	Not Available	871	Open in IMG/M
3300006749\|Ga0098042_1043498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1236	Open in IMG/M
3300006752\|Ga0098048_1062215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1159	Open in IMG/M
3300006789\|Ga0098054_1006890	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	4867	Open in IMG/M
3300006793\|Ga0098055_1074359	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300006793\|Ga0098055_1295029	Not Available	606	Open in IMG/M
3300006868\|Ga0075481_10082713	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1203	Open in IMG/M
3300006868\|Ga0075481_10257969	Not Available	613	Open in IMG/M
3300006919\|Ga0070746_10386511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	629	Open in IMG/M
3300006920\|Ga0070748_1067886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1392	Open in IMG/M
3300006921\|Ga0098060_1013568	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2622	Open in IMG/M
3300006921\|Ga0098060_1194480	Not Available	555	Open in IMG/M
3300006922\|Ga0098045_1146618	Not Available	545	Open in IMG/M
3300006923\|Ga0098053_1029801	Not Available	1161	Open in IMG/M
3300006925\|Ga0098050_1117788	Not Available	674	Open in IMG/M
3300006928\|Ga0098041_1169141	Not Available	702	Open in IMG/M
3300006990\|Ga0098046_1111527	Not Available	603	Open in IMG/M
3300007344\|Ga0070745_1078803	Not Available	1312	Open in IMG/M
3300007963\|Ga0110931_1051449	Not Available	1243	Open in IMG/M
3300008218\|Ga0114904_1030635	Not Available	1498	Open in IMG/M
3300009076\|Ga0115550_1174468	Not Available	737	Open in IMG/M
3300009413\|Ga0114902_1190437	Not Available	501	Open in IMG/M
3300009418\|Ga0114908_1091555	Not Available	1027	Open in IMG/M
3300009481\|Ga0114932_10438062	Not Available	772	Open in IMG/M
3300009495\|Ga0115571_1137317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1033	Open in IMG/M
3300009593\|Ga0115011_10524186	Not Available	944	Open in IMG/M
3300009603\|Ga0114911_1032865	All Organisms → Viruses → Predicted Viral	1677	Open in IMG/M
3300009620\|Ga0114912_1169074	Not Available	507	Open in IMG/M
3300010148\|Ga0098043_1099883	Not Available	847	Open in IMG/M
3300010149\|Ga0098049_1139217	Not Available	752	Open in IMG/M
3300010150\|Ga0098056_1199250	Not Available	669	Open in IMG/M
3300010150\|Ga0098056_1245505	Not Available	594	Open in IMG/M
3300010430\|Ga0118733_105694862	Not Available	655	Open in IMG/M
3300012953\|Ga0163179_11156454	Not Available	682	Open in IMG/M
3300017720\|Ga0181383_1175371	Not Available	572	Open in IMG/M
3300017721\|Ga0181373_1022078	Not Available	1186	Open in IMG/M
3300017726\|Ga0181381_1063561	Not Available	798	Open in IMG/M
3300017726\|Ga0181381_1087068	Not Available	666	Open in IMG/M
3300017733\|Ga0181426_1048829	Not Available	836	Open in IMG/M
3300017733\|Ga0181426_1057678	Not Available	769	Open in IMG/M
3300017734\|Ga0187222_1038153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1136	Open in IMG/M
3300017734\|Ga0187222_1096214	Not Available	670	Open in IMG/M
3300017737\|Ga0187218_1173613	Not Available	506	Open in IMG/M
3300017738\|Ga0181428_1093273	Not Available	703	Open in IMG/M
3300017738\|Ga0181428_1112907	Not Available	636	Open in IMG/M
3300017740\|Ga0181418_1121232	Not Available	632	Open in IMG/M
3300017744\|Ga0181397_1144249	Not Available	611	Open in IMG/M
3300017744\|Ga0181397_1180160	Not Available	533	Open in IMG/M
3300017748\|Ga0181393_1070433	Not Available	928	Open in IMG/M
3300017750\|Ga0181405_1085701	Not Available	802	Open in IMG/M
3300017750\|Ga0181405_1185949	Not Available	506	Open in IMG/M
3300017756\|Ga0181382_1108762	Not Available	746	Open in IMG/M
3300017757\|Ga0181420_1129755	Not Available	761	Open in IMG/M
3300017757\|Ga0181420_1144423	Not Available	712	Open in IMG/M
3300017758\|Ga0181409_1200817	Not Available	575	Open in IMG/M
3300017764\|Ga0181385_1128478	Not Available	773	Open in IMG/M
3300017767\|Ga0181406_1099058	Not Available	883	Open in IMG/M
3300017768\|Ga0187220_1017070	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2183	Open in IMG/M
3300017768\|Ga0187220_1083993	Not Available	961	Open in IMG/M
3300017772\|Ga0181430_1084674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	954	Open in IMG/M
3300017776\|Ga0181394_1013812	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3010	Open in IMG/M
3300017776\|Ga0181394_1221093	Not Available	572	Open in IMG/M
3300017779\|Ga0181395_1133554	Not Available	786	Open in IMG/M
3300017779\|Ga0181395_1198384	Not Available	624	Open in IMG/M
3300018426\|Ga0181566_10658395	Not Available	723	Open in IMG/M
3300022065\|Ga0212024_1009728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1414	Open in IMG/M
3300022065\|Ga0212024_1012259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1303	Open in IMG/M
3300022068\|Ga0212021_1036190	Not Available	978	Open in IMG/M
3300022178\|Ga0196887_1076600	Not Available	791	Open in IMG/M
3300024344\|Ga0209992_10115795	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1190	Open in IMG/M
3300025071\|Ga0207896_1039531	Not Available	789	Open in IMG/M
3300025079\|Ga0207890_1066430	Not Available	582	Open in IMG/M
3300025098\|Ga0208434_1037140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1118	Open in IMG/M
3300025101\|Ga0208159_1001034	All Organisms → cellular organisms → Bacteria	10655	Open in IMG/M
3300025101\|Ga0208159_1089534	Not Available	567	Open in IMG/M
3300025102\|Ga0208666_1089084	Not Available	780	Open in IMG/M
3300025102\|Ga0208666_1124031	Not Available	608	Open in IMG/M
3300025103\|Ga0208013_1131243	Not Available	611	Open in IMG/M
3300025112\|Ga0209349_1161982	Not Available	594	Open in IMG/M
3300025120\|Ga0209535_1110495	Not Available	960	Open in IMG/M
3300025120\|Ga0209535_1204762	Not Available	550	Open in IMG/M
3300025137\|Ga0209336_10173361	Not Available	552	Open in IMG/M
3300025151\|Ga0209645_1021571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	2444	Open in IMG/M
3300025151\|Ga0209645_1219376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	549	Open in IMG/M
3300025251\|Ga0208182_1059185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp.	769	Open in IMG/M
3300025267\|Ga0208179_1063182	Not Available	799	Open in IMG/M
3300025300\|Ga0208181_1106802	Not Available	533	Open in IMG/M
3300025508\|Ga0208148_1014870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	2302	Open in IMG/M
3300025645\|Ga0208643_1173183	Not Available	529	Open in IMG/M
3300025652\|Ga0208134_1039655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	1579	Open in IMG/M
3300025769\|Ga0208767_1132085	Not Available	939	Open in IMG/M
3300025806\|Ga0208545_1068311	Not Available	1000	Open in IMG/M
3300026183\|Ga0209932_1113192	Not Available	589	Open in IMG/M
3300026257\|Ga0208407_1139929	Not Available	741	Open in IMG/M
3300028448\|Ga0256383_106748	Not Available	906	Open in IMG/M
3300029787\|Ga0183757_1070884	Not Available	516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.14%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.86%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	50.86%
Strait	Environmental → Aquatic → Marine → Strait	25.86%
Coastal	Environmental → Aquatic → Marine → Coastal	13.79%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.59%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.72%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.72%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.86%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	50.86%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	25.86%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	12.93%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.59%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.72%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.72%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	41.38%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	25.86%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	12.93%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	8.62%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.72%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.72%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.72%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.72%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.86%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.86%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.86%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.86%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017733	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017737	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025079	Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental	Open in IMG/M
3300025508	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026257	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)	Environmental	Open in IMG/M
3300028448	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 300m	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_100778941	3300000115	Marine	METMTVQKRQPTCAERVAEEWKDRQEDLKDPEYEALGFDYVAPHTWDNQ
DelMOWin2010_101065401	3300000117	Marine	MTETVTVIKKEPTCAELVDEQWKDRQEDLKDPEYEALGFDYVAPHTWDDQPEGY
JGI24006J15134_102192702	3300001450	Marine	METVTVIKKEPTCAELVDEQWKDRQEDLKDPEYEALGFDYVEPHTWDDQPEG
JGI24003J15210_100524514	3300001460	Marine	MTETVTVLKKNPTCAERVKQEWTDRQEDLKNPEYEALGFDYVEPHTWDDQPEGYW
JGI24003J15210_100736061	3300001460	Marine	MTETVTVIKKEPTCAELVDEQWKDRQEDLKNPEYEALAFDYVEPHTWNDQP
JGI24003J15210_101586001	3300001460	Marine	MTETVTVVKKEPTCAELVDQQWKDRQEDLKNPEYEALAFDYVEPHTWNDQP
JGI24004J15324_100399353	3300001472	Marine	MTETVTVLKKEPTCAELVKEQWRERQEDLKDPEYEALGFDYVEPHTWDDQLEGYW
JGI24005J15628_100587611	3300001589	Marine	MTETVTVIKKEPTCAELVDEQWKDRQEDLKNPEYEALGFDYVEPHTW
JGI24005J15628_100693435	3300001589	Marine	MTETVTVLKKEPTCAELVKEQWRERQEDLKDPEYEALGFDYVEPH
JGI25128J35275_10821081	3300002488	Marine	MTETVTVIKKEPTCAELVEDQWQERQEDLKNPEYETLGFDYVEPHT
Ga0075462_101359322	3300006027	Aqueous	MTETVTVIKKNPTCAELVDEQWRERQEDLKNPEYEALGFDYVEPHTFNDQPEGYWRWQ
Ga0098038_12404101	3300006735	Marine	METVTVIKKEPTCAELVDEQWQERQEDLKDPEYEALAFDYVEPH
Ga0098038_12622212	3300006735	Marine	MTALKKEQSCQDLVEEQWKDRQEDLQDPEYEALGFDYVEPHTFTDQPE
Ga0098035_11282373	3300006738	Marine	MIGHIIERNKMETVTVIKKQPTCAELVKQEWIDRQEDLKNPEYEALGFDYVEPHTFNDQ
Ga0098042_10434984	3300006749	Marine	MGLLIQGAIIKGTPTCSELVEEQWQERQEDLKNPEYEALGFDYV
Ga0098048_10622153	3300006752	Marine	MGLLIQGAIIKGTPTCSELVDKEWKDRQEDLKNPEYEALGFDYVEPHTF
Ga0098054_10068901	3300006789	Marine	MTALKKEKSCKELVEEQWKDRQETLQDPNYEALGFDYVEPHT
Ga0098055_10743591	3300006793	Marine	METVTVLKSRPTCADRVAQEWKERQEDLKDPEYEALGFDYVTPHTFTDQIEGYWRWQFSWGG
Ga0098055_12950292	3300006793	Marine	METVTVLKSTPTCADRVKEQWKERQEDLKDPEYEALGFDYVAPHTFND
Ga0075481_100827135	3300006868	Aqueous	MTETVTVIKKEPTCAELVDEQWKDRQEDLKDPEYEALAFDYVEPHTFNDQPEGYWRWQ
Ga0075481_102579692	3300006868	Aqueous	MTETVTVIKKEPTCAELVNEQWKDRQEDLKDPEYEALAFDYVEPHTFNDQPEGYWR
Ga0070746_103865111	3300006919	Aqueous	MTETVTVIKKEPTCAELVEEQWRERQEDLKDPEYEALGFDYVAPHTWDDQPEGYWRWQF
Ga0070748_10678864	3300006920	Aqueous	MTETVTVLKKDPTCAELVKQEWIDRQEDLKNPEYEALAFDYVEPHTWDNQP
Ga0098060_10135681	3300006921	Marine	MTETVTVLKKNPTCAELVKHMWKGRKMDLEDPEYEALGFDYVEPHTFNDQPEGYWRWQFS
Ga0098060_11944801	3300006921	Marine	MTETVTVLKKKPTCAELVKQQWKDRQEDLERYGTDFEALIFDYVPPNTFENQKEGYWRWQFSWG
Ga0098045_11466181	3300006922	Marine	METVTVIKKEPTCAELVKQEWIDRQEDLKDPEYEALGFDYVEPHTWDDQP
Ga0098053_10298012	3300006923	Marine	MTETVTVIKKDPTCSELVEEQWKDRQEDLQNPEYEALGFDYVEPHTWDDQPEG
Ga0098050_11177881	3300006925	Marine	METVTVIKKNPTCAELVKQEWIDRQEDLKDPEYEALGFDYVEPHTFNDQPEG
Ga0098041_11691412	3300006928	Marine	MTETVTVIKKQPTCAELVKHVWEGRKMDLKDPEYEALGFDYVEPH
Ga0098036_11848711	3300006929	Marine	MTETVTVIKKEPTCAELVDEQWQERQEDLKDPEYEALAFDYVEPH
Ga0098036_12810881	3300006929	Marine	METVTVIKKEPTCGELVKQEWIDRQEDLKNPEYEALGFDYVEPH
Ga0098046_11115271	3300006990	Marine	METVTVIKKEPTCAELVDEQWKDRQEDLKDPEYEALGFDYVEPHTWDNQPEGY
Ga0070745_10788034	3300007344	Aqueous	MTETVTVIKKNPTCAELVDEQWRERQEDLKNPEYEALGFDYVEPHTFNDQ
Ga0110931_10514491	3300007963	Marine	METVTVIKKQPTCAELVKQEWIDRQEDLKNPEYEALGFDYVEPHTFNDQPE
Ga0114904_10306354	3300008218	Deep Ocean	MTETVTVIKKQPTCSELVAQEWKDRQEDLKDPEYEALGFDYVAPHTWDDQPE
Ga0114905_10976111	3300008219	Deep Ocean	MTETVTVLKKEPTCAELVEDQWQERQEDLKDPEYEALAFDYVEPH
Ga0115550_11744682	3300009076	Pelagic Marine	MTETVTVIKKNPTCAELVDEQWKDRQEDLKDPEYEALGFDYVEPHTFNDQ
Ga0114902_11904371	3300009413	Deep Ocean	MTETVTVIKKEPTCAELVEEQWQERQEDLKDPEYEALGFDYVEPHTFNDQ
Ga0114908_10915551	3300009418	Deep Ocean	MTETVTVIKKEPTCAELVDEQWRERQEDLKDPEYEALGFDYVAPHTWDDQPEGY
Ga0114932_104380622	3300009481	Deep Subsurface	MTETVTVLKKEPTCAELVDDQWRERQEDLKNPEYEALSFDYVAPHTWDDQPEG
Ga0115571_11373172	3300009495	Pelagic Marine	METVTVIKKEPTSAELVKHMWKGRKMDLEDPEYEALGFDYVEPHTFNDQPE
Ga0115011_105241861	3300009593	Marine	MTALKKEQSCQDLVEEQWKNRQEDLQNPEYEALGFDYVEPHTFTDQ
Ga0114911_10328651	3300009603	Deep Ocean	VGALTERNNMTETVTVLKKEPTCAELVDEQWQQRQEDLKDPEYEALGFDYVAPHTWDDQPEGYWR
Ga0114906_10926941	3300009605	Deep Ocean	METVTVIKKEPTCAELVDEQWRERQEDLKNPEYEALGFDYVAPH
Ga0114912_11690741	3300009620	Deep Ocean	VGALTERNNMTETVTVLKKEPTCAELVDEQWRERQEDLKNPEYEALGFDYVAPH
Ga0098043_10998832	3300010148	Marine	MGLLIQGAIIKGTPTCAELVDKEWKDRQEDLKNPEYEALGFDYVEPHTFTD
Ga0098049_11392171	3300010149	Marine	MTETVTVLKKDPSCSELVAQRWQERQEDLKNPEYEALGFDYVEPHTWDDQPEGYWRWQ
Ga0098056_11992501	3300010150	Marine	METVTVQKRQPTCAERVAEEWKERQEDLKDPEYEALGFDYVAPHTWDDQPEGYWRWQFS
Ga0098056_12455052	3300010150	Marine	METVTVIKKQPTCAELVDEQWQERQEDLKNPEYEALGFDYVEPHTWDNQPEGYWRW
Ga0118733_1056948621	3300010430	Marine Sediment	MTETVTVIKKEPTCAELVKQEWIDRQEDLKNPEYEALGFDYVAPHTWD
Ga0163179_111564541	3300012953	Seawater	MTETVTVLKKEPTCAELVDDQWRERQEDLKNPEYEALSFDYVAPHTWDDQPEGYWRWQ
Ga0181383_11753711	3300017720	Seawater	METVTVLKKNPTCAELVDEQWQERQEDLKNPEYEALGFDYVEPHTWDNQPEGYWRWQFS
Ga0181373_10220784	3300017721	Marine	MTETVTVIKKEPTCAELVDEQWQERQEDLKDPEYEALAFDYVEPHTWDDQPEGYWRWQF
Ga0181381_10635611	3300017726	Seawater	METVTVIKKNPTCAELVDEQWKDRQEDLKNPEYEALGFDYVEPHTWDDQPEGYWR
Ga0181381_10870682	3300017726	Seawater	METVTVIKKNPTCAELVKQEWIDRQEDLKDPEYEALAFDYVEPHTFN
Ga0181426_10488292	3300017733	Seawater	MTETVTVIKKEPTCAELVDEQWKDRQEDLKDPEYEALGFDYVEPHTWDDQPEGYWRWQF
Ga0181426_10576782	3300017733	Seawater	METVTVIKKNPTCAELVKQEWIDRQEDLKDLEYEALGFDYVAPHTWDD
Ga0187222_10381534	3300017734	Seawater	MTETVTVIKKEPTCAELVDEQWKDRQEDLKNPEYEALGFDYVEP
Ga0187222_10962141	3300017734	Seawater	METVTVIKKNPTCAELVKQEWIDRQEDLKDPEYEALGFDYVEPHTWDNQPEGYWRWQ
Ga0187218_11736131	3300017737	Seawater	METVTVIKKNPTCAELVKQEWIDRQEDLKDPEYEALGFDYVEPHTWDNQPEGDWRWQCSW
Ga0181428_10932732	3300017738	Seawater	MTETVTVIKKNPTCAELVKHMWKGRKMDLEDPEYEALGFDYVEPHTWDNQPEGYW
Ga0181428_11129071	3300017738	Seawater	METVTVLKKNPTCAELVDEQWQERQEDLKDPEYEALGFDYVEPHTFNDQPEG
Ga0181418_11212322	3300017740	Seawater	METVTVIKKNPTCAELVKQEWIDRQEDLKDPEYEALGFDYVEPHTFT
Ga0181397_11442491	3300017744	Seawater	METVTVIKKNPTCAELVKQEWIDRQEDLKDLEYEALGFDYVAPHTWDDQPE
Ga0181397_11801601	3300017744	Seawater	MTETVTVVKKEPTCAELVDEQWRERQEDLKNPEYEALGFDYVEPHTWDDQPEGSSP
Ga0181393_10704331	3300017748	Seawater	METVTVIKKNPTCAELVDEQWKDRQEDLKNPEYEALGFDYVEPHTWDDQP
Ga0181405_10857011	3300017750	Seawater	METVTVIKKNPTCAELVKQEWVDRQEDLKNPEYEALGFDYVEPHTWDNQPEGYWRWQF
Ga0181405_11859491	3300017750	Seawater	MTETVTVVKKEPTCAELVDEQWRERQEDLKNPEYEALGFDYVEPHTWNDQPEGYWR
Ga0181382_11087621	3300017756	Seawater	METVTVIKKNPTCAELVEEQWQERQEDLKDPEYEALGFDYVEPHTFNDQPEGYWRWQFS
Ga0181420_11297551	3300017757	Seawater	METVTVLKKNPTCAELVDEQWQERQEDLKNPEYEALGFDYVEPHTWDNQPEGYWRWQ
Ga0181420_11444231	3300017757	Seawater	METVTVIKKNPTCAELVKQEWIDRQEDLKDPEYEALGFDYVEPHTWDNQPEGYWR
Ga0181409_12008173	3300017758	Seawater	MTETVTVLKKEPTCAELVDEQWRERQEDLKDPEYEALGFDYVEPHTW
Ga0181385_11284781	3300017764	Seawater	METVTVIKKNPTCAELVKQEWIDRQEDLKDPEYEALGFDYVEPHTWDNQPEG
Ga0181406_10990581	3300017767	Seawater	MTETVTVIKKEPTCAELVEEQWRERQEDLKDPEYEALGFDYVEPHTWDDQL
Ga0187220_10170701	3300017768	Seawater	MTETVTVIKKEPTCAELVDEQWKDRQEDLKNPEYEALGFDYVEPHTWD
Ga0187220_10839931	3300017768	Seawater	METVTVIKKEPTCAELVKQEWIDRQEDLKDPEYEALCFDYVEPHTWDDQPEGYWRWQF
Ga0181430_10846741	3300017772	Seawater	METVTVIKKNPTCAELVKQEWIDRQEDLKDPEYEALGFDYVEPHTW
Ga0181394_10138129	3300017776	Seawater	METVTVIKKEPTCAELVKQEWIDRQEDLKDPEYEALCFDYVEPHTWDDQPEGYWR
Ga0181394_12210932	3300017776	Seawater	METVTVIKKNPTCAELVKQEWIDRQEDLKDPEYEALGFDYVEPHTWDNQPEGYWRWQFSW
Ga0181395_11335541	3300017779	Seawater	MTETVTVLKKEPTCAELVDEQWKDRQEDLKDPEYEALAFDYVEPHTWNDQPE
Ga0181395_11983841	3300017779	Seawater	MTETVTVIKKEPTCAELVDEQWRERQEDLKNPEYEALAFDYVEPHTWDDQLEGYS
Ga0181380_11713032	3300017782	Seawater	METVTVIKKNPTCAELVEEQWQERQEDLKDPEYEALGFDYVAPH
Ga0181566_105689751	3300018426	Salt Marsh	METVTILPDQKRDLRCADLVEEKWTARQEDLKDPEFEGLGFDYVEPHTFNDQPEGFWRWQFSWG
Ga0181566_106583951	3300018426	Salt Marsh	MTETVTVLKKEPTCAELVEDQWKERQEDLKDPEYEALGFDYVAPHTWDDQPEG
Ga0212024_10097284	3300022065	Aqueous	MTETVTVIKKEPTCAELVAQQWEDRQEDLKDPEYEALAFDYVAPHTWDDQPEGYWRWQF
Ga0212024_10122591	3300022065	Aqueous	MTETVTVIKKEPTCAELVEQEWKDRQEDLKDPEYEALGFDYVAPHTWDNQPEG
Ga0212021_10361901	3300022068	Aqueous	METVTILPDQKRDLRCADLVEEKWTERQEDLKNPEYEALGFDYVEPHTFNDQPEGYWRWQFSWGG
Ga0196887_10766002	3300022178	Aqueous	MTETVTVIKKEPTCAELVEQEWKDRQEDLKDPEYEALAFDYVAPHTWDDQPEGYW
Ga0209992_101157953	3300024344	Deep Subsurface	METVTVLRREPTCADRVAQEWKERQEDLKDPEYQALSFDYVEPNTFNDQVEGYWRWQ
Ga0207896_10395311	3300025071	Marine	MTETVTVLKKNPTCADRVNEEWKERQEDLKNPEYEALCFDYVEPHT
Ga0207890_10664301	3300025079	Marine	MNNTTVQKKQRTCADRVNEEWKERQEDLKNPEYEALCFDYVEPHTWDN
Ga0208434_10371401	3300025098	Marine	MGLLIQGAIIKGTPTCSELVDKEWKDRQEDLKNPEYEALGFDYVEPH
Ga0208159_100103417	3300025101	Marine	MGLLIQGAIIKGTPTCSELVEEQWQERQEDLKNPEYEALGFDYVAPHTWDDQPE
Ga0208159_10895342	3300025101	Marine	MTETVTVLKKDPSCAELVKQKWEDRQEDLKDPEYEALGFDYVAPHTFNDQAEGFW
Ga0208666_10890841	3300025102	Marine	MTETVTVLKKEPTCAELVDEQWRERQEDLKNPEYEALGFDYVEPHTWDDQ
Ga0208666_11240311	3300025102	Marine	MTETVTVLKKDPSCSELVAQRWQERQEDLKNPEYEALGFDYVEPHTW
Ga0208013_11312431	3300025103	Marine	METVTVIKKEPTCAELVDEQWQERQEDLKDPEYEALGFDYVEPHTWDNQPEGYWRWQFSW
Ga0209349_11619821	3300025112	Marine	MTETVTVLKKDPSCSELVAQQWEDRQEDLKNPEYEALGFDYVEPHTFNDQPEGYWRWQFS
Ga0209535_11104951	3300025120	Marine	MNNTTVQKKQRTCADRVNEEWKERQEDLKNPEYEALCFDYVEPHTWDNQKE
Ga0209535_12047621	3300025120	Marine	MTETVTVLKRQPTCADRVAEEWKERQEDLKDPEYEALSFDYVEPNTFNDQ
Ga0209336_100305641	3300025137	Marine	MTETVTVLKKEPTCAELVDEQWRERQEDLKNPEYEALAFDYVEPH
Ga0209336_101733611	3300025137	Marine	MNNTTVQKKQRTCADRVNEEWKERQEDLKNPEYEALCFDYVEP
Ga0209645_10215711	3300025151	Marine	MAETVTVLTTCADLVHERWKQRQEDLKDPEFEGLSFDYVEPHTFNNQ
Ga0209645_12193761	3300025151	Marine	MTALKKEQSCQDLVEERWKHRQETLQDPNYEALGFDYVAPHTWDDQPEGYWRWQFSWGGP
Ga0208182_10591852	3300025251	Deep Ocean	METVTVIKKEPTCAELVDEQWRERQEDLKNPEYEALGFDYVAPHTWDDQPEGYWRWQFS
Ga0208179_10631821	3300025267	Deep Ocean	MTETVTVLKKEPTCAELVDEQWKDRQEDLKDPEYEALGFDYVAPHTW
Ga0208181_11068021	3300025300	Deep Ocean	MTETVTVLKKEPTCAELVKHMWKGRKMDLEDPEYEALGFDYVEPHTFKKQPEGYWRWQFSWG
Ga0208148_10148705	3300025508	Aqueous	MTETVTVIKKEPTCAELVKQEWIDRQEDLKNPEYEALAFDYVEPHTWDNQPEGYW
Ga0208643_11731831	3300025645	Aqueous	MTETVTVIKKEPTCAELVEQEWKDRQEDLKDPEYEALGFDYVAPHTWDNQPEGY
Ga0208134_10396553	3300025652	Aqueous	MTETVTVIKKEPTCAELVKQEWIDRQEDLKNPEYEALAFDYVEPHTWDNQPEGY
Ga0208767_11320852	3300025769	Aqueous	MTETVTVLKKDPTCAELVKQEWIDRQEDLKNPEYEALAFDYVEPHTWDNQPEGYW
Ga0208545_10683111	3300025806	Aqueous	MTETVTVIKKEPTCAELVAQQWEDRQEDLKDPEYEALGFDYVAPHTWDNQPEGY
Ga0209932_11131922	3300026183	Pond Water	MTETVTVLKKEPTCAELVAQQWEDRQEDLKNPEYEALAFDYVEPHT
Ga0208407_11399291	3300026257	Marine	METVTVLKSTPTCADRVDYMWHQRQEDLKDPEYEALGFDYVTPHTFT
Ga0256383_1067482	3300028448	Seawater	MTETVTVLKKEPSCSELIHGQWAERQEDLKNPEYEALGFDYVEPHTFNDQPEA
Ga0183757_10708841	3300029787	Marine	METVTVIKKQPTCAELVKQEWIDRQEDLKDPEYEALGFDYVEPHTFNDQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079319

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences