Metagenome / Metatranscriptome Family F079309

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079309
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	73 residues
Representative Sequence	SLADALSLCELLANTDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGHRNTGVETLKRLLRHG
Number of Associated Samples	88
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.00 %
% of genes near scaffold ends (potentially truncated)	48.28 %
% of genes from short scaffolds (< 2000 bps)	79.31 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.966 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.310 % of family members)
Environment Ontology (ENVO)	Unclassified (31.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.690 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.64% β-sheet: 0.00% Coil/Unstructured: 36.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
a.24.9.1: alpha-catenin/vinculin	d1l7ca2	1l7c	0.72307
a.24.9.1: alpha-catenin/vinculin	d1st6a7	1st6	0.71338
a.24.9.1: alpha-catenin/vinculin	d1dova_	1dov	0.70317
a.146.1.1: Telomeric repeat binding factor (TRF) dimerisation domain	d3bu8a_	3bu8	0.68808
a.24.2.0: automated matches	d2d4ua1	2d4u	0.68701

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF07885	Ion_trans_2	1.72
PF13469	Sulfotransfer_3	0.86
PF08447	PAS_3	0.86
PF00171	Aldedh	0.86
PF01391	Collagen	0.86
PF08734	GYD	0.86
PF08240	ADH_N	0.86
PF05711	TylF	0.86
PF07883	Cupin_2	0.86
PF08044	DUF1707	0.86
PF01872	RibD_C	0.86
PF03772	Competence	0.86
PF00999	Na_H_Exchanger	0.86
PF13229	Beta_helix	0.86
PF01272	GreA_GreB	0.86
PF00144	Beta-lactamase	0.86
PF04970	LRAT	0.86
PF00392	GntR	0.86
PF08922	DUF1905	0.86
PF04542	Sigma70_r2	0.86
PF00903	Glyoxalase	0.86
PF07874	DUF1660	0.86
PF11746	DUF3303	0.86
PF10706	Aminoglyc_resit	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.86
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.86
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.86
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.86
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.86
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.86
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.86
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.86
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.86
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.86
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.86
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.86
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.86
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.86
COG0658	DNA uptake channel protein ComEC, N-terminal domain	Intracellular trafficking, secretion, and vesicular transport [U]	0.86
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.86
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.86
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.86
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.97 %
Unclassified	root	N/A	6.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.97 %
Unclassified	root	N/A	6.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.97 %
Unclassified	root	N/A	6.03 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.34 %
Unclassified	root	N/A	6.03 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.48 %
Unclassified	root	N/A	6.03 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	75.00 %
Unclassified	root	N/A	6.03 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.59 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.86 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	74.14 %
Unclassified	root	N/A	6.03 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.59 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.86 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.14 %
Unclassified	root	N/A	6.03 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.86 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.86 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.14 %
Unclassified	root	N/A	6.03 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.86 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.86 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.14 %
Unclassified	root	N/A	6.03 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	0.86 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.86 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.14 %
Unclassified	root	N/A	6.03 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	0.86 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.86 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459018\|G1P06HT01BHW4O	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
2170459019\|G14TP7Y02HY5AI	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300000880\|AL20A1W_1084163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300000956\|JGI10216J12902_119093377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1272	Open in IMG/M
3300001537\|A2065W1_10962195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	967	Open in IMG/M
3300002568\|C688J35102_120782034	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300002568\|C688J35102_120806093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1637	Open in IMG/M
3300004114\|Ga0062593_100368979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1265	Open in IMG/M
3300004480\|Ga0062592_101229335	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005435\|Ga0070714_102247359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300005438\|Ga0070701_10031879	All Organisms → cellular organisms → Bacteria	2619	Open in IMG/M
3300005439\|Ga0070711_100183457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1603	Open in IMG/M
3300005440\|Ga0070705_100056486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2312	Open in IMG/M
3300005440\|Ga0070705_101430360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300005456\|Ga0070678_100950572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300005456\|Ga0070678_102192209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300005467\|Ga0070706_100005048	All Organisms → cellular organisms → Bacteria	12611	Open in IMG/M
3300005468\|Ga0070707_100005583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11751	Open in IMG/M
3300005471\|Ga0070698_101836018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300005518\|Ga0070699_100006710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10010	Open in IMG/M
3300005526\|Ga0073909_10269009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300005526\|Ga0073909_10488674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	594	Open in IMG/M
3300005545\|Ga0070695_100867501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300005549\|Ga0070704_102100513	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005558\|Ga0066698_10806013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300005560\|Ga0066670_10093636	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300005615\|Ga0070702_100543298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300005719\|Ga0068861_101211024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300006046\|Ga0066652_100796105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300009012\|Ga0066710_102408536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300009012\|Ga0066710_102631409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300009012\|Ga0066710_103957896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300009038\|Ga0099829_10756965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300009088\|Ga0099830_11408763	Not Available	580	Open in IMG/M
3300009098\|Ga0105245_10250143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1722	Open in IMG/M
3300009098\|Ga0105245_10321749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1524	Open in IMG/M
3300009137\|Ga0066709_101374235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300009137\|Ga0066709_101394376	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300009137\|Ga0066709_103941791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300010046\|Ga0126384_10683040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300010303\|Ga0134082_10381883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300010398\|Ga0126383_10039432	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3840	Open in IMG/M
3300010399\|Ga0134127_11177168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300011106\|Ga0151489_1255985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300012201\|Ga0137365_10000866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22256	Open in IMG/M
3300012208\|Ga0137376_10846883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300012212\|Ga0150985_103513222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1235	Open in IMG/M
3300012353\|Ga0137367_10197474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1458	Open in IMG/M
3300012355\|Ga0137369_10356064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1068	Open in IMG/M
3300012363\|Ga0137390_10048025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4133	Open in IMG/M
3300012363\|Ga0137390_10118733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2619	Open in IMG/M
3300012937\|Ga0162653_100000991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2237	Open in IMG/M
3300012951\|Ga0164300_10609502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300012971\|Ga0126369_11380315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300012984\|Ga0164309_10800367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300012989\|Ga0164305_11131791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300014968\|Ga0157379_11542887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300015371\|Ga0132258_10350672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3649	Open in IMG/M
3300015371\|Ga0132258_10553813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2882	Open in IMG/M
3300018027\|Ga0184605_10096052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1305	Open in IMG/M
3300018028\|Ga0184608_10148800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1008	Open in IMG/M
3300018028\|Ga0184608_10438017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300018054\|Ga0184621_10372672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300018056\|Ga0184623_10490654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300018076\|Ga0184609_10574335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300018081\|Ga0184625_10542994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300019867\|Ga0193704_1042600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300019869\|Ga0193705_1021355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1409	Open in IMG/M
3300019869\|Ga0193705_1034255	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300021415\|Ga0193694_1055752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300022534\|Ga0224452_1159782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300022694\|Ga0222623_10279434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300022756\|Ga0222622_10074832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2005	Open in IMG/M
3300022756\|Ga0222622_10834582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300025922\|Ga0207646_10002859	All Organisms → cellular organisms → Bacteria	20048	Open in IMG/M
3300025935\|Ga0207709_10661529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	832	Open in IMG/M
3300025941\|Ga0207711_11345309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300025972\|Ga0207668_10631514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300026075\|Ga0207708_11520646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300026118\|Ga0207675_102480971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300028379\|Ga0268266_10941367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300028716\|Ga0307311_10100973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300028718\|Ga0307307_10313968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300028719\|Ga0307301_10095233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	941	Open in IMG/M
3300028755\|Ga0307316_10393533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300028771\|Ga0307320_10127074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	979	Open in IMG/M
3300028791\|Ga0307290_10093633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1095	Open in IMG/M
3300028791\|Ga0307290_10213575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300028793\|Ga0307299_10056480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1448	Open in IMG/M
3300028796\|Ga0307287_10204176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300028799\|Ga0307284_10231427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300028807\|Ga0307305_10038771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2187	Open in IMG/M
3300028807\|Ga0307305_10415708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300028811\|Ga0307292_10048955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1576	Open in IMG/M
3300028811\|Ga0307292_10390650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300028811\|Ga0307292_10420191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300028875\|Ga0307289_10061852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1505	Open in IMG/M
3300028875\|Ga0307289_10496176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300028878\|Ga0307278_10000003	All Organisms → cellular organisms → Bacteria	200745	Open in IMG/M
3300028878\|Ga0307278_10029177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2530	Open in IMG/M
3300028878\|Ga0307278_10270784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300028884\|Ga0307308_10306409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300028885\|Ga0307304_10109909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1112	Open in IMG/M
3300030990\|Ga0308178_1097516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300031170\|Ga0307498_10001408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3568	Open in IMG/M
3300031170\|Ga0307498_10191430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300031170\|Ga0307498_10204582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300031170\|Ga0307498_10348350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300032205\|Ga0307472_101177260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300032205\|Ga0307472_101907967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.48%
Host-Associated	Host-Associated	13.79%
Engineered	Engineered	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.14%
Plants	Host-Associated → Plants	13.79%
Aquatic	Environmental → Aquatic	10.34%
Solid Waste	Engineered → Solid Waste	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.28%
Sediment	Environmental → Aquatic → Sediment	10.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.90%
Grass	Engineered → Solid Waste → Grass	1.72%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.48%
Loam	Environmental → Terrestrial → Soil → Loam	13.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.59%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.72%
Composting	Engineered → Solid Waste → Grass → Composting	1.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.72%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.21%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.86%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459018	Litter degradation MG2	Engineered	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2MG_00898090	2170459018	Switchgrass, Maize And Mischanthus Litter	LLCELLANSDPQRYERAALRWLERFIDERLPPLAEVALAASALAELRHGRRNAGVETLKRLLRQS
4MG_00475980	2170459019	Switchgrass, Maize And Mischanthus Litter	GLSLADALLLCELLANADPQRYERAALRWLERFINERLPPLTEVALAASALAELRHGHRNVGGEALRRLLRNG
AL20A1W_10841631	3300000880	Permafrost	EIGGLSLEDALSLCELLASLDSARYERAALRWLQRFVDERLPPLAEVALAASALAEVRHGDRTIGLETLKRLLRRG*
JGI10216J12902_1011082511	3300000956	Soil	AKTDPARYERAALRWLARFVDERLPPLTEVALAASALAELRHGQRAAGVETLKRLVRRS*
JGI10216J12902_1190933771	3300000956	Soil	MGGLSLADALALCELLAATDPQRYERAALRWLQRFIDERLPPLGEVVLASSALAELRHKSRAVGVDALKRLVRH*
A2065W1_109621951	3300001537	Permafrost	MGGLSLDDALSLCELLAALDPARYERAASRWLQLFIDERSPPLAEVALAASALAEVRHGNRAIGLVTLGGLLRRR*
C688J35102_1207820342	3300002568	Soil	MGHVSLADALLLCELLAKTDVARYERAALRWLQRFIDERLPPLSEVALAASALAELRHGTRNVGAEALKRLVRHG*
C688J35102_1208060934	3300002568	Soil	MGGLSLADALMLCELPAKTDVVRYERAAVRWLQRFIDERLPPLAEIALAATAHAELRHGDRNAGADALKRLVQHR*
Ga0062593_1003689791	3300004114	Soil	CELLANADPARYERAALRWLQRFIDERLPPLTEVALAASALADLRHGRRNVGVEALKRLLHRG*
Ga0062592_1012293352	3300004480	Soil	MAAREMGGLSLYDALLLCELLAKTDPARYERASLRWLVRLVEERSPPLTEVALAASALAELRHGRRAAGVDTLKRLVRRG*
Ga0070714_1022473592	3300005435	Agricultural Soil	VGSPCQRPLLCELTAKAIRRYERAALRWLQRFIDERLPRLTEVALAASALAELRHGHRNTGVEALKRLLRHG*
Ga0070701_100318794	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LCELLANTDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGHRNTGVETLKRLLRHG*
Ga0070711_1001834572	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VGSPCQRPLLCELTAKTIRRYERAALRWLQRFIDERLPRLTEVALAASALAELRHGHRNTGVETLKRLLRHG*
Ga0070705_1000564861	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	EMGGLSLADALSLCELLANADPARYERAALRWLQRFIDERLPPLSEVALAASALAELRHGHRNVGVEALKRLLRHG*
Ga0070705_1014303601	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DALSLCELFANADPARYERAALRWLQRFIDERLPPLTEVALAAAALAELRHGHRNTGVETLKRLLRRG*
Ga0070678_1009505722	3300005456	Miscanthus Rhizosphere	MAAREMGGLSLADALSLCELLANTDPVRYERAALRWLQRLIDERLPPLAEVALAASALAELRHGNRNTGVDTLKRLLRHG*
Ga0070678_1021922092	3300005456	Miscanthus Rhizosphere	VGSPCQRPLLCELTAKTIRRYERAALRWLQRFIDERLPRLTEVALAASALAELRHGHRNTGVEALKRLLRHG*
Ga0070706_10000504814	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGGLSLADALMLCELLANTDPARYERAALRWLDRFINERLPPLTEVALAASALAELRYGRRNVGVDALKRLLRHG*
Ga0070707_1000055836	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAAREMGGLSLADALLLRELLANTDPARYERAALRWLERFIDERLPPLTEVALAASALAELRHGRRNVGVEALKRLLRHG*
Ga0070698_1018360181	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGGLSLADALALCELLANVDPARYERAALRWLQRFIDERLPPLAEVALAASALAELRHGHRDVGGKH*
Ga0070699_1000067107	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAAREMGGLSLADALMLCELLANSDPARYEKAALRWLERFIAERSPPLTELALAASALAELRHGRRNTGVEALKRLLHR*
Ga0073909_102690092	3300005526	Surface Soil	VLLLCELLASVDPARYERAALLWLQQFIDERLPPPTEVTLAASAVAELRHGNRNLGIEALKRLLRQ*
Ga0073909_104886741	3300005526	Surface Soil	REMGGLSLADALSLCELLATVDPARYERAALRWLQRFIDERLPPLAEIALAASALAELRHGHRNTGVETLKRLLRHG*
Ga0070695_1008675011	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VGSPCQRPLLCELTAKTIRRYERAALRWLQRFIDERLPRLTEVALAASALAELRHGHRNTGVET
Ga0070704_1021005132	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	NLREADLAARELGGLSLDDALKLCVLLAERDPQRFERAALRWLQRFIEERLPPVAEVALAASALAELRHGLRGAGRESLVRLAVRGRTVA*
Ga0066698_108060132	3300005558	Soil	MGGLSLADALLLCELLANTDPARYERAALCWLARFIEERLPPLAEVALAASALAELRHGQRNTGVETLKRLLRHG*
Ga0066670_100936362	3300005560	Soil	MAARELGGLSLEDALKLCVMLAERDLQRFERAALRWLERFIGERLPPISEVALAAAALAELRHGRHRAGRDSLTRLGGRRRT*
Ga0070702_1005432982	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GSPCQRPLLCELTAKTIRRYERAALRWLQRFIDERLPRLTEVALAASALAELRHGHRNTGVETLKRLLRHG*
Ga0068861_1012110241	3300005719	Switchgrass Rhizosphere	LSLCELLAKTDPARYDRAALRWLQRFIDERLPPLTEVLLAASALAELRHGYRNTSVETLKRLPRHG*
Ga0066652_1007961052	3300006046	Soil	MGGLSLADALLLCELLAKTDVARYDRAALRWLQRFIDERLPPLTEAALAASALAELRHGRRNLGVEALKAMLRR*
Ga0066710_1024085361	3300009012	Grasslands Soil	LSRVACEAVAPAASRDDQREMGLPLAAALLLCELLAAVDPSRYERAALRWLQRFIDERLPPLTEVAVAAAALTELRHGQRSVGLEALKR
Ga0066710_1026314092	3300009012	Grasslands Soil	MGGLSLADALLLCELMAKADPTRYECAALRWLERFIAERLPPLTEVALAASALAELRHGQRAAGLEALKRLLRRP
Ga0066710_1039578962	3300009012	Grasslands Soil	LANSLSLCVLLARTDPARYERAALRWLERFIEERLPPLTEVALAASALAELRHGHRNAGVETLKRLLRR
Ga0099829_107569652	3300009038	Vadose Zone Soil	VRTRNEAASWLPTWRLALCELLANTDPARYERAALRWLERFIGERSPPLTEVALAAALAELRHGKRNVGVETLRRLLDRR*
Ga0099830_114087632	3300009088	Vadose Zone Soil	CEFFAFADPERYERVARRWLQRFIDERLPLLAEVTLAASALTELRHGDRAVGVETLKRLIYRG*
Ga0105245_102501433	3300009098	Miscanthus Rhizosphere	SLADALSLCELLANTDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGHRNTGVETLKRLLRHG*
Ga0105245_103217494	3300009098	Miscanthus Rhizosphere	LLARWVGSPCQRPLLCELTAKTIRRYERAALRWLQRFIDERLPRLTEVALAASALAELRHGHRNTGVETLKRLLRHG*
Ga0066709_1013742351	3300009137	Grasslands Soil	NRRHLQAAEMAAREMGGLSLADALLLCELLANADPARYERAALRRLQRFIDERLPPLAEVALAASAIAELRHGDRNTGLRH*
Ga0066709_1013943762	3300009137	Grasslands Soil	MAAREMGELSLADALLLCELLANADQARYERAALRLLQRFIDERLPSLTEVALAASALAERHGHRDTGVETFKPLLRHG*
Ga0066709_1039417912	3300009137	Grasslands Soil	MGGLSLADALLLCELMAKADPTRYECAALRWLERFIAERLPPLTEVALAASALAELRHGQRAAGLEALKRLLRRP*
Ga0126384_106830403	3300010046	Tropical Forest Soil	DVRQPDPDAELLDATDPKRYERAALRWLQRFIDERLPPLAEVALAASALAELRHSQRAAGVDALKRLVQC*
Ga0134082_103818831	3300010303	Grasslands Soil	MAAREMGGLSLADALLLCELLANADPARYERAALRRLQRFIDERLPPLAEVALAASAIAELRHGDRNTGVETLKRLLRRG*
Ga0126383_100394322	3300010398	Tropical Forest Soil	MGGLSLADALALCELLAATDPKRYERAALRGLQRFIDERLPPIAEVALAASALAELRHGRRAVGVETLKRVVRR*
Ga0134127_111771681	3300010399	Terrestrial Soil	TDALSLCELFANADAARYERAALRWLQRFIDERLPPLIEVTLAASALAELRHGNRNAGIEALKRLLRSG*
Ga0151489_12559851	3300011106	Soil	MAAREMGGLSLADALSLCELLANTDPARYESAALRWLRRFIDERLPPLTEVALAASALAELRHGHRNIGVE
Ga0137365_100008666	3300012201	Vadose Zone Soil	MVAPRPPCCELLANADPARYERAALRWLQPFIDERLPPLTEVTLAASALAELRHGNRNTGVETLKRLLRSG*
Ga0137376_108468833	3300012208	Vadose Zone Soil	EMGGLSLADALLLCELLARLDPARYERAALRWLERFINERLPPLTEVALAASALAELRHGQRNAGVEALKRLLRHG*
Ga0150985_1035132223	3300012212	Avena Fatua Rhizosphere	MGGLSLADALMLCELPAKTDVVRYERATVRWLQRFIDERLPPLAEIALAATAHAELPHGDRNAGADALKRLVQRR*
Ga0137367_101974742	3300012353	Vadose Zone Soil	MAAGEMGGLSLADALSLCELLANTDPARFERAALRWLQRFIDERLPPLAEVSLAASALAELAHGSRNAGIETLKRLLHRG*
Ga0137369_103560642	3300012355	Vadose Zone Soil	MAAGEMGGLSLEDALSLCELLAFADQARFERAALRWLERFIDERLPPLAEVALAASALAEVSNTGDRAVGLENR*
Ga0137390_100480251	3300012363	Vadose Zone Soil	LPTWRLALCELLANTDPARYERAALRWLERFIGERSPPLTEVALAAALAELRHGKRNVGVETLRRLLDRR*
Ga0137390_101187335	3300012363	Vadose Zone Soil	MGGLSLADARLLCELLANTDSARYERAALRWLERFIDERLPPLTEVALAASALAELRHGHRNVGVEALKRLFHRG*
Ga0162653_1000009914	3300012937	Soil	MAAREMGGLSLADALLLCELLANVDPARYERAALRSLQRFIDERLPPLTEVALAASALSELRHGSRHVGVEALKRLLRHG*
Ga0126375_119832441	3300012948	Tropical Forest Soil	MGGLSLADALALCELLAATDPKRYERAALRGLQRFIDERLPPIAEVALAASALAELRHGRRA
Ga0164300_106095022	3300012951	Soil	LPISRRESALGGLSLADALLLCELLANADPQRYERASLRWLQRFIDERLPPLSELTLAAAALAELRHGHRHTGVEALRRLLRRG*
Ga0126369_113803153	3300012971	Tropical Forest Soil	MGRVSLADVLSLCELLAAADPKRYERAALRWLQRFIDERLPPLTEVGLAAAALTELRHGQWTVGVDALKRILRR
Ga0164309_108003671	3300012984	Soil	MGGLSLADALLLCELLANVDPARYERAALRWLQRFIDERVPPLTEIALAAAALAELRHGRRNVGVEALKRLIRSG*
Ga0164305_111317912	3300012989	Soil	LPISRRESALGGLSLADALLLCELLANADPQRYERASLRWLQRFIDERLPPLSEVALAAAALAELRHGHRHTGVEALRRLLRRG*
Ga0157377_106534571	3300014745	Miscanthus Rhizosphere	RRHVQAAEMPPREMDGLSLADALSLCELLANADPARYERAVLRWLQRFIDERLPPLTEVALAASALAELRHGYRNIGLQTLKQLLRRG*
Ga0157379_115428871	3300014968	Switchgrass Rhizosphere	LLANTDPARYERAALRWLERFIDERLPPLVEVALAASALAELRHGNRNVGVEALKRLLRMEAR*
Ga0132258_103506722	3300015371	Arabidopsis Rhizosphere	MLCKLFSNADPTRYERAALRWLQRFIDERLPPLAEVALAASAMTELRHGRRAAGVDALKQLLRR*
Ga0132258_105538135	3300015371	Arabidopsis Rhizosphere	MGPVSLADALSLCELLAATDPKRYERAALRWLQRFIDERLPPLTEVALATTALVDLRYGKGTAGFESLRLLLRR*
Ga0184605_100960522	3300018027	Groundwater Sediment	MAAREMGGLSLADALLLCELLANTDPARYERAALRLRWLERFIEERLPPLTEVALAASALAELRHGNRNVGIEALKRLLRHG
Ga0184608_101488001	3300018028	Groundwater Sediment	LLCELLANVDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGQRNVGVETLKRLLRHHRG
Ga0184608_104380173	3300018028	Groundwater Sediment	CELLANADPARYERGALRWLQRFIDERSPPLTEVSLAASALAELRHGRRNVGVEALKRLLRHG
Ga0184621_103726721	3300018054	Groundwater Sediment	LLANADPARYERAALRWLERFIDERLPPLTEVALAASALAELRHGHRNTGVETLKRLLRR
Ga0184623_104906542	3300018056	Groundwater Sediment	MAAREMGGLSLADALLLCELLANTDPARYEGAALRLRWLERFIEERLPPLTEVALAASALAELRHGNRNVGIEALKRLLRHG
Ga0184609_105743351	3300018076	Groundwater Sediment	LCELLANVDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGQRNVGVETLKRLLRHHRG
Ga0184625_100624776	3300018081	Groundwater Sediment	NADPARYERAPLRWLQRFIDERLPPLTEVALAASALAELRHGQRNVGVETLERLLRHPGS
Ga0184625_105429941	3300018081	Groundwater Sediment	MAAREMGGLSLADALLLCELLANTDPARYERGALRWLQRFIDERLPPLTEVALAASALAELRHGNRNVGVEALKRLLRHG
Ga0193704_10426003	3300019867	Soil	MPRGPSPPRDRFRFCELLANADPARYERAALRWLERFIDERLPPLTEVALAASALAELRHGHRNTGVETLKRLLRRG
Ga0193705_10213554	3300019869	Soil	MGGLSLADALLLCELLANTDPARHERAALRWLQRFIDERLPPLTEVALAASALAELRHGNRNVGLETLKRLLSRG
Ga0193705_10342551	3300019869	Soil	MPRGPSPPRDRFRFCELLANADPARYERAALRWLERFIDERLPPLTEVALAASALAELRHGHRNTGVETLKRL
Ga0193694_10557522	3300021415	Soil	LSLCALMAELDPARYERAALRWLQRFIDERLPPLAEVALAASALNEVRYGTRAVGIDTLRRLLRRG
Ga0224452_11597821	3300022534	Groundwater Sediment	VQAAEMAAREMGGLSLADALSLCELLANADPARYERGALRWLQRFIDERSPPLTEVSLAASALAELRHGRRNVGVEALKRLLRHG
Ga0222623_102794341	3300022694	Groundwater Sediment	MAAREMGGLSLADALSLCELLANADPARYERGALRWLQRFIDERSPPLTEVSLAASALAELRHGRRNVGVEALKRLLRHG
Ga0222622_100748324	3300022756	Groundwater Sediment	MGGLSLADALLLCELLANTDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGNRNVGLETLKRLLSRG
Ga0222622_108345821	3300022756	Groundwater Sediment	ADALSLCELLANADPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGKRNVGVDALKRLLRHG
Ga0207646_100028598	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGGLSLADALMLCELLANTDPARYERAALRWLERFINERLPPLTEVALAASALAELRHGRRNVGVDALKRLLRHG
Ga0207709_106615291	3300025935	Miscanthus Rhizosphere	LANTDPARYERAALRWLERFIDERLPPLTEVALASSALAELRHGHRNTGVEILKRLLHHG
Ga0207711_113453091	3300025941	Switchgrass Rhizosphere	LSLCELLAKTDPARYDRAALRWLQRFIDERLPPLTEVLLAASALAELRHGYRNTSVETLKRLPRHG
Ga0207668_106315142	3300025972	Switchgrass Rhizosphere	MSIATEQADCFQGSIATVRQMGGLSLADALSLCELLANTDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGNRNTGVETLKRLLRHG
Ga0207708_115206461	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ELLANTDPARYERAALRWLERFIDERLPPLTEVALAASALAELRHGHRNIGLQTLKQLLRRG
Ga0207702_124574811	3300026078	Corn Rhizosphere	HRRHVQAAEMAAREMGGLSLADALSLCELLANTDPARYERAALRRLQRFIDERLPPLTEVALAASALAELRHGNRNTGVETLKRLLRHG
Ga0207675_1024809712	3300026118	Switchgrass Rhizosphere	LLCELTAKTIRRYERAALRWLQRFIDERLPPLSEVALAASALAELRHGHRNVGVEALKRLLRHG
Ga0268266_109413674	3300028379	Switchgrass Rhizosphere	LLCELTAKTIRRYERAALRWLQRFIDERLPRLTEVALAASALAELRHGHRNTGVETLKRLLRHG
Ga0307311_101009731	3300028716	Soil	MAAREMGGLSLADALSLCELLANADPARYERGALRWLQRFIDERSPPLTEVALAASALAELRHGRRNVGVEALKRLLRHG
Ga0307307_103139681	3300028718	Soil	LLCELLAKADPARYERAALRWLQRFIDERTPPLTEVSLAASALAELRHGKRNVGVDALKRLLRHG
Ga0307301_100952331	3300028719	Soil	MPRGPSPPRDRFRFCELLANADPARYERAALRWLERFIDERLPPLTEVALAASALAELRHGHRNTGVETLKRLLR
Ga0307316_103935331	3300028755	Soil	CELLANTDPVRYERAALRWLQRFIDERLPPLTEVALAASALAELRHGRRNVGVETLKRLLNRGA
Ga0307320_101270741	3300028771	Soil	LCELLANTDPARYERAALRWLQRFIDERSPPVTEVALAASALAELRHGTRNTGVDTLKRLLRHG
Ga0307290_100936332	3300028791	Soil	MAAREMGGLSLAAALLLCELLANADPARYERVALRWLQRFIDERSPPLAEVALAVSALAELRHGHRNIGVETLKRLLRHHRG
Ga0307290_102135752	3300028791	Soil	MGGLSLADALLLCELLANVDPARYERAALRWLQRFVDERLPPLTEVALAASALAELRHGNRNTGVETLKWLLHRG
Ga0307299_100564804	3300028793	Soil	MGGLSLAGALLLCELLANVDPARYERAALRWLHRFVDERLPPLTEVALAASALAELRHGNRNTGVETLKWLLHRG
Ga0307287_102041761	3300028796	Soil	MPRGPSPPRDRFRFCELLANADPARYERAALRWLERFIDERLPPLTEVALAASALAELRHGHRNTGVET
Ga0307284_102314273	3300028799	Soil	SLADALLLCELLANTDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGNRNVGLETLKRLLSRG
Ga0307305_100387711	3300028807	Soil	ADALLLCELLANVDPARYERAALRWLQRFIDERLPPLSEVALAASALAELRHGNRGTGVDALKRLLRRG
Ga0307305_104157082	3300028807	Soil	LCELLANVDPARYERAALRWLQRFIDERLPPLSEVALAASALAELRHGHRSTGVDALKRLLRHG
Ga0307292_100489553	3300028811	Soil	MGGLSLAGALLLCELLANVDPARYERAALRWLQRFVDERLPPLTEVALAASALAELRHGNRNTGVETLKWLLHRG
Ga0307292_103906502	3300028811	Soil	LADAPLLCELLANTDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGNRNVGLETLKRLLSRG
Ga0307292_104201911	3300028811	Soil	AREMGGLSLADALSLCELLANVDPARYERAALRWLRRFIDERVPPLTEVALAAAALAELRHGRRNVGVEALKRLLQRG
Ga0307289_100618521	3300028875	Soil	SLADALLLCELLANADPARYERAALRWLQRFIDERLPPLTEVALATSALAELRHGNRNVGLETLKRLLSRG
Ga0307289_104961762	3300028875	Soil	EMGGLSLADALLLCELLANTDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGNRNVGLETLKRLLSRG
Ga0307278_10000003208	3300028878	Soil	MAAREMGGLSLADALMLCELLANTDPARYEKAALRWLERFIDERTPPLTEVALAASALAELRHGRRNTGVETLKRLLHR
Ga0307278_100291775	3300028878	Soil	MGGLSLADALMLCELLARADPSRYERAALRWLQRFIDERLPPLTEVALATSALAELRHGKGDVGLEALKLLLRR
Ga0307278_102707842	3300028878	Soil	MLAERDAPRFERAALRWLERFISERLPPIAEVALAATALAELRHGDRGAGQDSLLRLTERRRHARA
Ga0307308_103064091	3300028884	Soil	LCELLANADPSRYERAALRWLQRFIDERLPPLTEVALAASALAELWHGHRNTGVETLKRLLRRG
Ga0307304_101099092	3300028885	Soil	LLARADPARYERAALRWLQRFIDERLPPLTEVALATSALAELRHGKGNVGLEALKLLLRR
Ga0308178_10975161	3300030990	Soil	GLSLADALLLCELLANTDPARYERAALRLRWLERFIEERLPPLTEVALAASALAELRHGNRNVGIEALKRLLRHG
Ga0307498_100014083	3300031170	Soil	LLCELLANADPARYERAALRWLQRFIAERVPPLTEVALAASALAELRHGHRNIGLQPLKQLLHRGWAASLSEK
Ga0307498_101914302	3300031170	Soil	AEALLLCELLAKADPSRYERAALRWLQRFIGERAPPLTEVSLATSALAELRHGHRDIGLQTLKQLLRRG
Ga0307498_102045821	3300031170	Soil	LHLERGRGIAGLSLADALLLCELLANVDPARYERTALRWLQRFIDERLPPLTEVALAASAFAELRHGNRNVGTEALKRLLRHG
Ga0307498_103483502	3300031170	Soil	LSLADALSLCELLANTDPARYERAALRWLQRFIDERLPPLTEVALAASALAELRHGRRNTGVETLKRLLRQR
Ga0307472_1009606491	3300032205	Hardwood Forest Soil	VRAAAGADPTRYERAALRWLQRFIDERLPPLTEVALAASALAEPRHGRRNVRVETLKRLS
Ga0307472_1011772602	3300032205	Hardwood Forest Soil	VVSFLNADPARYERAALRWLQRFIDERLPPLTEVTLAASALAELRHGHRNTGVETLKRLLRHG
Ga0307472_1019079672	3300032205	Hardwood Forest Soil	VLLLREPLASVDPARYERTALRWLQQFIDERLPQPTEVALAASALAELRHGHRNIGVPCR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079309

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences