Metagenome Family F079306

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079306
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	75 residues
Representative Sequence	MKLIIYYIACMIAGDFAAYFIGLFVEYEWGSRASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADAGSVGPG
Number of Associated Samples	83
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.14 %
% of genes near scaffold ends (potentially truncated)	23.28 %
% of genes from short scaffolds (< 2000 bps)	97.41 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.759 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.759 % of family members)
Environment Ontology (ENVO)	Unclassified (47.414 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.414 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.92% β-sheet: 0.00% Coil/Unstructured: 46.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF07045	DUF1330	2.59
PF02705	K_trans	0.86
PF04392	ABC_sub_bind	0.86
PF11149	DUF2924	0.86
PF01145	Band_7	0.86
PF00589	Phage_integrase	0.86
PF02518	HATPase_c	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	2.59
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.86
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
All Organisms	root	All Organisms	42.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
cellular organisms	root	All Organisms → cellular organisms	42.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	28.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	25.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.59 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	25.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000733\|JGI12408J11912_1014393	Not Available	586	Open in IMG/M
3300001160\|JGI12654J13325_1008239	Not Available	708	Open in IMG/M
3300001545\|JGI12630J15595_10024505	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300001545\|JGI12630J15595_10075295	Not Available	664	Open in IMG/M
3300002245\|JGIcombinedJ26739_100519842	Not Available	1067	Open in IMG/M
3300003505\|JGIcombinedJ51221_10148696	All Organisms → cellular organisms → Bacteria → Proteobacteria	945	Open in IMG/M
3300004152\|Ga0062386_101282210	Not Available	609	Open in IMG/M
3300005165\|Ga0066869_10070677	Not Available	652	Open in IMG/M
3300005332\|Ga0066388_100911495	Not Available	1456	Open in IMG/M
3300005332\|Ga0066388_102413725	Not Available	954	Open in IMG/M
3300005713\|Ga0066905_101328053	Not Available	648	Open in IMG/M
3300005764\|Ga0066903_103121995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	896	Open in IMG/M
3300009038\|Ga0099829_10542186	Not Available	967	Open in IMG/M
3300010339\|Ga0074046_10020489	Not Available	4647	Open in IMG/M
3300010366\|Ga0126379_10698754	Not Available	1108	Open in IMG/M
3300010398\|Ga0126383_11441974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	778	Open in IMG/M
3300010937\|Ga0137776_1691529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	830	Open in IMG/M
3300011120\|Ga0150983_13092831	Not Available	604	Open in IMG/M
3300011269\|Ga0137392_10565229	Not Available	944	Open in IMG/M
3300012205\|Ga0137362_11356902	Not Available	597	Open in IMG/M
3300012211\|Ga0137377_11320020	Not Available	652	Open in IMG/M
3300012356\|Ga0137371_11002649	Not Available	633	Open in IMG/M
3300012359\|Ga0137385_11012116	Not Available	685	Open in IMG/M
3300012361\|Ga0137360_10887736	Not Available	768	Open in IMG/M
3300012363\|Ga0137390_10870043	Not Available	857	Open in IMG/M
3300012363\|Ga0137390_11810275	Not Available	542	Open in IMG/M
3300012917\|Ga0137395_10273988	Not Available	1190	Open in IMG/M
3300012927\|Ga0137416_11615391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300015371\|Ga0132258_12257343	Not Available	1365	Open in IMG/M
3300015374\|Ga0132255_105809415	Not Available	522	Open in IMG/M
3300016270\|Ga0182036_10780605	Not Available	777	Open in IMG/M
3300016294\|Ga0182041_11004876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	754	Open in IMG/M
3300016294\|Ga0182041_11543433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	612	Open in IMG/M
3300016294\|Ga0182041_11809651	Not Available	566	Open in IMG/M
3300016319\|Ga0182033_10257597	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300016319\|Ga0182033_10581936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	971	Open in IMG/M
3300016319\|Ga0182033_11141490	Not Available	697	Open in IMG/M
3300016319\|Ga0182033_11489574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	611	Open in IMG/M
3300016357\|Ga0182032_10196779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1531	Open in IMG/M
3300016357\|Ga0182032_10473997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1025	Open in IMG/M
3300016357\|Ga0182032_11443372	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300016371\|Ga0182034_11010135	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300016387\|Ga0182040_10687526	Not Available	835	Open in IMG/M
3300016387\|Ga0182040_11189670	Not Available	641	Open in IMG/M
3300016404\|Ga0182037_10916343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	761	Open in IMG/M
3300016404\|Ga0182037_11373847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	624	Open in IMG/M
3300016422\|Ga0182039_11029429	Not Available	739	Open in IMG/M
3300016445\|Ga0182038_11889015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	540	Open in IMG/M
3300026831\|Ga0207738_117087	Not Available	663	Open in IMG/M
3300026835\|Ga0207782_116461	Not Available	576	Open in IMG/M
3300026839\|Ga0207764_118684	Not Available	624	Open in IMG/M
3300026845\|Ga0207760_109419	Not Available	816	Open in IMG/M
3300026847\|Ga0207802_1012715	Not Available	745	Open in IMG/M
3300026868\|Ga0207818_1018112	Not Available	625	Open in IMG/M
3300026872\|Ga0207785_1016317	Not Available	653	Open in IMG/M
3300026879\|Ga0207763_1021003	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300026921\|Ga0207860_1022032	Not Available	765	Open in IMG/M
3300026988\|Ga0207834_1025556	Not Available	705	Open in IMG/M
3300027010\|Ga0207839_1023871	Not Available	695	Open in IMG/M
3300027014\|Ga0207815_1009040	Not Available	1309	Open in IMG/M
3300027019\|Ga0207857_1046833	Not Available	657	Open in IMG/M
3300027024\|Ga0207819_1019162	Not Available	919	Open in IMG/M
3300027045\|Ga0207726_1014877	Not Available	1264	Open in IMG/M
3300027521\|Ga0209524_1045740	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300027583\|Ga0209527_1073512	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300027603\|Ga0209331_1056826	Not Available	985	Open in IMG/M
3300027603\|Ga0209331_1091526	Not Available	748	Open in IMG/M
3300027610\|Ga0209528_1016970	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300027651\|Ga0209217_1037072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1510	Open in IMG/M
3300027651\|Ga0209217_1146361	Not Available	656	Open in IMG/M
3300027727\|Ga0209328_10133403	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300027824\|Ga0209040_10152762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1244	Open in IMG/M
3300027824\|Ga0209040_10159727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1208	Open in IMG/M
3300027825\|Ga0209039_10418339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	510	Open in IMG/M
3300027915\|Ga0209069_10710488	Not Available	591	Open in IMG/M
3300028047\|Ga0209526_10146643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1653	Open in IMG/M
3300028047\|Ga0209526_10607638	Not Available	699	Open in IMG/M
3300028047\|Ga0209526_10690702	Not Available	644	Open in IMG/M
3300028047\|Ga0209526_10967757	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300031545\|Ga0318541_10674033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	578	Open in IMG/M
3300031546\|Ga0318538_10236773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	979	Open in IMG/M
3300031546\|Ga0318538_10450356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	697	Open in IMG/M
3300031561\|Ga0318528_10622137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	579	Open in IMG/M
3300031744\|Ga0306918_10176973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1595	Open in IMG/M
3300031744\|Ga0306918_10597836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	865	Open in IMG/M
3300031771\|Ga0318546_10955726	Not Available	603	Open in IMG/M
3300031793\|Ga0318548_10597714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	537	Open in IMG/M
3300031821\|Ga0318567_10841027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	520	Open in IMG/M
3300031879\|Ga0306919_10645735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	816	Open in IMG/M
3300031879\|Ga0306919_10656344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	809	Open in IMG/M
3300031879\|Ga0306919_10753472	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300031890\|Ga0306925_10209946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2101	Open in IMG/M
3300031890\|Ga0306925_10370048	Not Available	1538	Open in IMG/M
3300031890\|Ga0306925_10647935	All Organisms → cellular organisms → Bacteria → Proteobacteria	1111	Open in IMG/M
3300031890\|Ga0306925_11081704	Not Available	812	Open in IMG/M
3300031890\|Ga0306925_11311236	Not Available	719	Open in IMG/M
3300031910\|Ga0306923_11172856	Not Available	823	Open in IMG/M
3300031912\|Ga0306921_10908960	Not Available	999	Open in IMG/M
3300031941\|Ga0310912_11174069	Not Available	585	Open in IMG/M
3300031942\|Ga0310916_10751936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	823	Open in IMG/M
3300031942\|Ga0310916_11236694	Not Available	616	Open in IMG/M
3300031947\|Ga0310909_11296876	Not Available	586	Open in IMG/M
3300031954\|Ga0306926_10264971	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300031954\|Ga0306926_11212759	Not Available	886	Open in IMG/M
3300032025\|Ga0318507_10375686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	619	Open in IMG/M
3300032051\|Ga0318532_10197273	Not Available	715	Open in IMG/M
3300032059\|Ga0318533_11069854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	591	Open in IMG/M
3300032076\|Ga0306924_11039774	Not Available	897	Open in IMG/M
3300032076\|Ga0306924_11796886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	639	Open in IMG/M
3300032261\|Ga0306920_101529506	Not Available	952	Open in IMG/M
3300032261\|Ga0306920_102189737	Not Available	769	Open in IMG/M
3300032261\|Ga0306920_102290175	Not Available	749	Open in IMG/M
3300032261\|Ga0306920_102336113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	740	Open in IMG/M
3300033289\|Ga0310914_10759511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	867	Open in IMG/M
3300033289\|Ga0310914_11401664	Not Available	602	Open in IMG/M
3300033290\|Ga0318519_10511887	Not Available	724	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.28%
Host-Associated	Host-Associated	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.10%
Aquatic	Environmental → Aquatic	5.17%
Plants	Host-Associated → Plants	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.10%
Freshwater	Environmental → Aquatic → Freshwater	3.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.86%
Sediment	Environmental → Aquatic → Sediment	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.48%
Loam	Environmental → Terrestrial → Soil → Loam	32.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	32.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000733	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80	Environmental	Open in IMG/M
3300001160	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300026831	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 9 (SPAdes)	Environmental	Open in IMG/M
3300026835	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 60 (SPAdes)	Environmental	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026879	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300026988	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 5 (SPAdes)	Environmental	Open in IMG/M
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027019	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 22 (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12408J11912_10143932	3300000733	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKANPAASNEQDAGSAGPG*
JGI12654J13325_10082391	3300001160	Forest Soil	LQLLFYYVAFMIAGDLAAYFLGLFVEREWGSHASLIVFLALYFGFLWVAWILAVWATAPKKADPAASNEQDAGSAGPG*
JGI12630J15595_100245052	3300001545	Forest Soil	MIAGDLAAYFLGLFVEREWGSHASLIVFLALYFGFLWVAWILAVWATAPKKADPAASNEQDAGSAGPG*
JGI12630J15595_100752951	3300001545	Forest Soil	MQLVYYYVTCMIAGDFAAYFIGLFVEHEWGSHASLIVFLALYFLFLWVAWIIAVWATEPKKADPAADAGSVGPG*
JGIcombinedJ26739_1005198421	3300002245	Forest Soil	MQLVYYYVACMIAGDFVAYFIGLFVEHEWGSYASLIVFLALYFLSLWVAWIIAVWATEPKKADPDAGSVGPG*
JGIcombinedJ51221_101486962	3300003505	Forest Soil	VQLLFYYVAFMIAGDLAAYFLGLFVEHEWGSHASLIVFLALYFGFLWVAWILAVWATEPKKADPAASNEQDAGSAGPG*
Ga0062386_1012822101	3300004152	Bog Forest Soil	VQLIFYYVAFMIAGDFAAYFIGLFVEHEWGSRASFIVFLALYFGFLWVSWLLAVWVTEPKKADLAGPTTPSV*
Ga0066869_100706772	3300005165	Soil	MQLVYYYVACMIAGDFVAYFIGLFVEHEWGSNASLIVFLALYFGSLWVAWIFAVWATEPKKKADRAADARSVGPG*
Ga0066388_1009114952	3300005332	Tropical Forest Soil	MRLIYYYVACMIVGDFVAYFIGLFVEYKWGSYASLMVFLALYFISLWVAWIFAVWITEPKKADPASGH*
Ga0066388_1024137253	3300005332	Tropical Forest Soil	MQLVFYYVASMIAGNFAAYFIGLFVEREWGSHASLIVFLALYFGSLWFAWIIAVWATKPKKAPPAADAGRVGPG*
Ga0066905_1013280531	3300005713	Tropical Forest Soil	DQSAMQLITYYIVFMIVGDLAAYLLGLLIEREFGSQVSLIAFLALYFAFLWVAWIFAVRLTEPKSTKVARETA*
Ga0066903_1031219952	3300005764	Tropical Forest Soil	MKLIIYYIACMIAGDFAAYFIGLFVEYEWGSQASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADATSVGPG*
Ga0099829_105421862	3300009038	Vadose Zone Soil	VQLIYYYVGFMIAGDFASYFIGLFVEYEWGSNVSLIVFLALYFGFLWVSWVLAVWASEPKKANPAASNKQDAGSARPG*
Ga0074046_100204897	3300010339	Bog Forest Soil	LEVISLRRGRAVRLIIYYVAFMIAGDLAAYFIGLFVEHEWGSHASLIVFLALYFGFLWVAWILAVWATEPKKADPAASNEQDAGSAGPG*
Ga0126379_106987541	3300010366	Tropical Forest Soil	MIVGDFVAYFIGLFVEYQWGSYASLMVFFAPCFASLWVAWIFAVWMTEPKKADPAADAGSVGPG*
Ga0126383_114419741	3300010398	Tropical Forest Soil	MRLIYYYVACMIVGDFVAYFIGLFVEYKWGSYVSLIVFLALYFASLWVSWIFAVWMTKPKKADPAAD
Ga0137776_16915292	3300010937	Sediment	MRLILYYIACMIAGDFAAYFIGLFVEHEWGSHASLIVFLALYFASLWVAWIFAVWMTEPKKANPAAEVGSVGPG*
Ga0150983_130928312	3300011120	Forest Soil	MIAGDLAAYFLGLFVEHEWGSHASLIVFLALYFGFLWVAWILAVWATEPKKADPAASNEQDAGSAGPG*
Ga0137392_105652292	3300011269	Vadose Zone Soil	VQLIYYYVAFMVAGDFAAYFIGLFVEYEWGSNVSLIVFLALYFGFLWVSWIFAVWATEPKKADPAADAGTTSRSERQPPEF*
Ga0137362_113569021	3300012205	Vadose Zone Soil	VVQEAISLREEGAVQLIYYYVAFMITGDFAAYFIGLFVEHEWGSNASLIVFLALYFGFLWVSWILAVWAAEPKKADLAASNRQDAGSAGPG*
Ga0137377_113200201	3300012211	Vadose Zone Soil	VVQEVISLREEGAVQLIYYYVAFMITGDFAAYFIGLFVEHEWGSNASLIVFLALYFGFLWVSWILAVWATEPKKADLAASNKQDAGSAGPG*
Ga0137371_110026492	3300012356	Vadose Zone Soil	VKLIYYYVACMIAGDFAAYFIGLFVEHEWGSNASLIVFLALYFGFLWVSWILAVWATEPKKADLAASNKQDAGSAGPG*
Ga0137385_110121161	3300012359	Vadose Zone Soil	VVQEAISLREEGAVQLIYYYVAFMITGDFAAYFIGLFVEHEWGSNASLIVFLALYFGFLWVSWILAVWATEPKKADLAASNKQDAGSAGPG*
Ga0137360_108877363	3300012361	Vadose Zone Soil	MQLVYYYVACMIAGDFAAYFIGLFVEYEWGSNVSLIVFLALYFGFLWVSWIFAVWATEPKKADPAADAGTTSRSER
Ga0137390_108700432	3300012363	Vadose Zone Soil	VQLIYYYVAFMVAGDFAAYFIGLFVEYEWGSNVSLIVFLALYFGFLWVSWIFAVWATEPKKADPAADAGSAGHATVWRRKRRE*
Ga0137390_118102751	3300012363	Vadose Zone Soil	KGWGHFFKKEGAVQLVYWYVACMIAGDFAAYFIGLFVEHEWGSNASLIVFLALYFGFLWVSWILAVWATEPKKKADPAADAGSVGPG*
Ga0137395_102739883	3300012917	Vadose Zone Soil	VVQEVISLREEGAVQLIYYYVAFMITGDFAAYFIGLFVAHEWGSNASLIVFLALYFGFLWVSWILAVWATEPKKADLASSNKQDAGSAGPG*
Ga0137416_116153911	3300012927	Vadose Zone Soil	SSHGTTTAWEDHAVLLIVWYLGFMIAGDFAAYFIGLFVEYEWGSQASLIVFLALYFIFLWIAWILSVWVTEHKKAAVAA*
Ga0132258_122573432	3300015371	Arabidopsis Rhizosphere	LGPFLEEGAVKLIFYYVACMIAGDFAAYFLGLFVEYEWGSNVSLIVFLALYFFFLWVAWIFAVWATEPKKADPAAGT*
Ga0132255_1058094151	3300015374	Arabidopsis Rhizosphere	KLIFYYVACMIAGDFAAYFLGLFVEYEWGSNVSLIVFLALYFFFLWVAWIFAVWATEPKKADPAAGT*
Ga0182036_107806051	3300016270	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFLSLWVAWIFAVWMTEPEKADPAADAGSVGPG
Ga0182041_110048762	3300016294	Soil	RLIYYYVACMIAGNFVAYFIGLFVEYEWGSYVSLIVFLALYFASLWVAWIFAVWMTEPKKADPAADAGSVGPG
Ga0182041_115434331	3300016294	Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWILAVWATEPKKANPAASNEQGAGSAGPG
Ga0182041_118096511	3300016294	Soil	VLRQRRRDRCGAAMRLIFYYVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKADPAADAGSVRPG
Ga0182033_102575973	3300016319	Soil	MRLIFYYVACMIVGDFVAYFIGLFVEYEWGSYASLMVFLALYFASLWVAWIFAVWMTEPKKADPAADADAGSVGPG
Ga0182033_105819361	3300016319	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFASLWMAWIFAVWMTEPKKADPAADARSVRPG
Ga0182033_111414903	3300016319	Soil	CMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKADPAVDAGSVRPG
Ga0182033_114895741	3300016319	Soil	VQLLFYYVAFMIVGDFAAYFLGLFVEREWGTHASLIVFLALYFGFLWVAWILAVWMTEPKKANPAASNE
Ga0182032_101967791	3300016357	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKADPAADARSVGPG
Ga0182032_104739973	3300016357	Soil	VQLLFYYVAFMIVGDFAAYLLGLFVEHEWGTHASLIVFLALYFGFLWVAWILAVWMTEPKKANPAASNE
Ga0182032_114433722	3300016357	Soil	VQLIIYYLVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKANPAASNEQAAGSAGPG
Ga0182034_110101351	3300016371	Soil	LEVISLRTGHAVQLLFYYVAFMIVGDFAAYFLGLFVEHEWGTHASLIVFLALYFGFLWVAWILAVWVTEPKKANPAASNE
Ga0182040_106875261	3300016387	Soil	VRLIYYYVACMIAGNFVSYFVGRFVEYEWGSHASLVVFLALYFGSLWVAWIFAVWVTEPKKADPPAADPAAGT
Ga0182040_111896701	3300016387	Soil	MRLIYYHVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKADPAADA
Ga0182037_109163433	3300016404	Soil	MKLIIYYIACMIAGDFAAYFIGLFVEYEWGSQASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADTRSVGPG
Ga0182037_113738471	3300016404	Soil	LEVISLTTGHAVQLLFYYVAFMIVGDFAAYFLGLFVEREWGTHASLIVFLALYFGFLWVAWILAVWMTEPKKANPAASNE
Ga0182039_110294291	3300016422	Soil	VQLLFYYLAFMIVGDFAAYLLGLFVEHEWGTHASLIVFLALYFGFLWVAWILAVCMTEPKKANPAASNE
Ga0182038_118890152	3300016445	Soil	MKLIIYYIACMIAGDFAAYFIGLFVEYEWGSQASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADAGSVRPG
Ga0207738_1170872	3300026831	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKANPAASNEQDAGSAGPG
Ga0207782_1164612	3300026835	Tropical Forest Soil	VQLLFYYLAFMIVGDFAAYFLGLFVEHEWGSHASLIVFLALYFGFLWVAWIFAVWATEPKKADPAASNE
Ga0207764_1186841	3300026839	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKADPAASNE
Ga0207760_1094191	3300026845	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLVLYFGFLWVSWVLAVWATEPKKVNPAASNEQDAGSAGPG
Ga0207802_10127152	3300026847	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLVLYFGFLWVSWVLAVWATEPKKANPAASNEQDAGSAGPG
Ga0207818_10181121	3300026868	Tropical Forest Soil	VQLIIYYLVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKANPAASNEQDAGSAGPG
Ga0207785_10163171	3300026872	Tropical Forest Soil	MRLVYYYVACMIAGDFAAYFIGLFIEHEWGSHASLIAFLALYFLSLWVAWIIAVWATEPKKADPAADARSVGPG
Ga0207763_10210032	3300026879	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKVNPAASNEQDAGSAGPG
Ga0207860_10220322	3300026921	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKANPAA
Ga0207834_10255562	3300026988	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLVLYFGFLWVSWVLAVWATEPKKADPAASNEQDAGSAGPG
Ga0207839_10238712	3300027010	Tropical Forest Soil	MRLILYYIACMIAGDFAAYFIGLFVEYKWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKANPAASNEQDAGSAGPG
Ga0207815_10090403	3300027014	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKANPAASNEQDAGSAGPN
Ga0207857_10468331	3300027019	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKANPAAS
Ga0207819_10191621	3300027024	Tropical Forest Soil	VRLIIYYVAFMISGDFAAYFIGLFVEYEWGSHASLIVFLVLYFGFLWVSWVLAVWATEPKKVNPAASNEQDAGSAGPG
Ga0207726_10148773	3300027045	Tropical Forest Soil	VQLIIYYVVFMISGDFAAYFIGLFVEYEWGSHASLIVFLALYFGFLWVSWVLAVWATEPKKANP
Ga0209524_10457402	3300027521	Forest Soil	MQLLFYYVAFMIAGDLAAYFLGLFVEHEWGSHASLIVFLALYFGFLWVAWILAVWATEPKKADPAASNEQDAGSAGPG
Ga0209527_10735122	3300027583	Forest Soil	MQLVYYYVTCMIAGDFAAYFIGLFVEHEWGSYASLIVFLALYFLSLWVAWIIAVWATEPKKADPDAGSV
Ga0209331_10568261	3300027603	Forest Soil	VQLLFYYVAFMIAGDLAAYFLGLFVEREWGSHASLIVFLALYFGFLWVAWILAVWATEPKKADPAASNEQDAGSAGP
Ga0209331_10915263	3300027603	Forest Soil	MQLVYYYVACMIAGDFAAYFIGLFVEHEWGSHASLIVFLALYFFFLWVAWIFAVWATEPKKADPAASNE
Ga0209528_10169702	3300027610	Forest Soil	MQLVYYYVASMIAGDFAAYFIGLFVEHEWGSHASLIVFLALYFGFLWVAWILAVWATEPKKADPAASNEQDAGSAGPG
Ga0209217_10370721	3300027651	Forest Soil	LQLLFYYVAFMIAGDLAAYFLGLFVEREWGSHASLIVFLALYFGFLWVAWILAVWATAPKKADPAASNEQDAGSAGPG
Ga0209217_11463611	3300027651	Forest Soil	FLYSLCHISRLRGTKGLGHFSKTEGAMQLVYYYVACMIAGDFVAYFIGLFVEHEWGSYASLIVFLALYFLSLWVAWIIAVWATEPKKADPDAGSVGPG
Ga0209328_101334031	3300027727	Forest Soil	LQLLFYYVAFMIAGDLAAYFLGLFVEHEWGSHASLIVFLALYFGFLWVAWILAVWATEPKKADPAASNEQDAGSAGPG
Ga0209040_101527622	3300027824	Bog Forest Soil	VRLIIYYVAFMIAGDLAAYFIGLFVEHEWGSHASLIVFLALYFGFLWVAWILAVWATEPKKADPAASNEQDAGSAGPG
Ga0209040_101597271	3300027824	Bog Forest Soil	VKLIYYYVACMIAGDFVAYFVGLFVENEWGSHASLIVFLALYFASLWVAWIIAVWATEPKKADPAADAGSAKPG
Ga0209039_104183392	3300027825	Bog Forest Soil	VLLIYYYVAFMIAGDVAAYFIGLFVEHEWGSHASLIVFLALYFGFLWVAWILAVWATEPKKADPAASNEQDAGSAGPG
Ga0209069_107104882	3300027915	Watersheds	MQLVYYYVACMIAGDFAAYFIGLFVEREWGSNVSLIVFLALYFFFLWVAWIFAVWATEPKKVDPAVDAGSAGPPG
Ga0209526_101466435	3300028047	Forest Soil	MQLVYYYVACMIAGDFAAYFIGLFVEHEWGSNASLIVFLALYFLFLWVAWIIAVWATEPKKADPDAGSVGPG
Ga0209526_106076381	3300028047	Forest Soil	MQLVYYYVTCMIAGDFAAYFIGLFVEHEWGSHASLIVFLALYFLFLWVAWIIAVWATEPKKADPAADAGSVGPG
Ga0209526_106907021	3300028047	Forest Soil	VQLLFYYVAFMIAGDLAAYFLGLFVEHEWGSHASLIVFLALYFGFLWVAWILAVWATEPKKADPAASNEQDAGSAGPG
Ga0209526_109677571	3300028047	Forest Soil	RTGRSLQLLFYYVAFMIAGDLAAYFLGLFVEREWGSHASLIVFLALYFGFLWVAWILAVWATAPKKADPAASNEQDAGSAGPG
Ga0318541_106740332	3300031545	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYVSLIVFLALYFASLWVSWIFAVWMTKPKKADPAADAGSVGPG
Ga0318538_102367731	3300031546	Soil	MRLIFYYVACMIVGDFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKADPAADAGSVGPG
Ga0318538_104503561	3300031546	Soil	LRGRAMRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFASLWMAWIFAVWMTEPKKADPAADARSVRPG
Ga0318528_106221372	3300031561	Soil	MKLIIYYIACMIAGDFAAYFIGLFVEYEWGSRASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADAGSVGPG
Ga0306918_101769732	3300031744	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYVSLIVFLALYFASLWVSWIFAVWMTKPKKADPAADAGSVEPG
Ga0306918_105978362	3300031744	Soil	MRLILYYIACMIAGDFAAYFIGLFVEYEWGSRASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADARSVGPG
Ga0318546_109557261	3300031771	Soil	VKLIYYYVACMIAGNFVSYFVGRFVEYEWGSHASLVVFLALYFGSLWVAWIFAVWATEPKKADPPAADP
Ga0318548_105977141	3300031793	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSRASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADARSVGPG
Ga0318567_108410272	3300031821	Soil	MKLIIYYIACMIAGDFAAYFIGLFVEYEWGSQASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADATSVGPG
Ga0306919_106457353	3300031879	Soil	MKLIIYYIACMIAGDFAAYFIGLFVEYEWGSHASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADARSVGP
Ga0306919_106563443	3300031879	Soil	MRLIFYYVACMIVGDFVAYFIGLFVEYEWGSYASLMVFLALYFASLWVAWIFAVWMTEPKKADPAADAGSVGPG
Ga0306919_107534722	3300031879	Soil	SLRTGHTVQLLFYYIAFMIVGDFAAYFLGLFVEHEWGTHASLIVFLALYFGFLWVAWILAVWVTEPKKANPAASNE
Ga0306925_102099463	3300031890	Soil	MKLIIYYIACMIAGDFAAYFIGLFVEYEWGSHASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADARSVGPG
Ga0306925_103700483	3300031890	Soil	MRLIYYHVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKADPAADAGSVRPG
Ga0306925_106479353	3300031890	Soil	VQLLFYYVAFMIVGDFAAYLLGLFVEHEWGTHASLIVFLALYFGFLWVAWILAVWVTEPKKANPAASNE
Ga0306925_110817041	3300031890	Soil	MRLIFYYVACMIAGDFVAYFIGLFVEYKWGSYASLMVFLAPYFISLWVAWIFAVWITEPKKADPASGH
Ga0306925_113112362	3300031890	Soil	VKLIYYYVACMIAGNFVSYFVGRFVEYEWGSHASLLVFLALYFGSLWMAWIFAVWATEPKKADPPAADPAAGT
Ga0306923_111728562	3300031910	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKADPAADAGSVGPG
Ga0306921_109089602	3300031912	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYQWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKADPAVDAGSVRPG
Ga0310912_111740691	3300031941	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYQWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKVDPAADAGSVRPG
Ga0310916_107519362	3300031942	Soil	MKLIIYYIACMIAGDFVAYFIGLFVEYEWGSHASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADARSVGPG
Ga0310916_112366942	3300031942	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPK
Ga0310909_112968762	3300031947	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKADPAADAGSVRPG
Ga0306926_102649712	3300031954	Soil	MKLIIYYIACMIAGDFAAYFIGLFVEYEWGSRASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADARSVGPG
Ga0306926_112127591	3300031954	Soil	VKLIYYYVACMIAGNFVSYFVGRFVEYEWGSHASLIVFLALYFGSLWMAWIFAVWATEPKKADPPAADP
Ga0318507_103756861	3300032025	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSQASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADATSVGPG
Ga0318532_101972732	3300032051	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYASLIVFLALYFTSLWVSWIFAVWMTEPKKADPAADAGSVGPG
Ga0318533_110698541	3300032059	Soil	VACMIVGDFVAYFIGLFVEYEWGSYASLMVFLALYFASLWVAWIFAVWMTEPKKADPAADATSVGPG
Ga0306924_110397742	3300032076	Soil	MRLIFYYVACMIAGDFVAYFIGLFVEYKWGSYASLMVFLALYFISLWVAWIFAVWITEPKKADPASGH
Ga0306924_117968862	3300032076	Soil	MKLIIYYIACMIAGDFAAYFIGLFVEYEWGSRASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADASSVGPG
Ga0306920_1015295062	3300032261	Soil	MRLIFYYVACMIAGDFVAYFIGLFVEYKWGSYASLMVFLALYFISLWVAWLFAVWITEPKKVGPG
Ga0306920_1021897372	3300032261	Soil	VKLIYYYVACMIAGNFVSYFVGRFVEYEWGSHASLIVFLALYFGSLWMAWIFAVWATEPKKADPPAADPAAGT
Ga0306920_1022901751	3300032261	Soil	MRLIYYHVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKVDPAADAG
Ga0306920_1023361132	3300032261	Soil	VGAISLRGRAMKLIIYYIACMIAGDFAAYFIGLFVEYEWGSQASLIVFLALYFASLWVAWIFAVWMTEPKKADPAADARSVGPG
Ga0310914_107595111	3300033289	Soil	MRLIYYYVACMIAGNFVAYFIGLFVEYEWGSYASLMVFLALYFASLWVAWIFAVWMTEPKKADPAADAGSVGPG
Ga0310914_114016641	3300033289	Soil	KLIYYYVACMIAGNFVSYFVGRFVEYEWGSYASLIVFLALYFGSLWMAWIFAVWATEPKKADPPAADPAAGT
Ga0318519_105118873	3300033290	Soil	MRLIFYYVACMIVGDFVAYFIGLFVEYEWGSYASLMVFLALYFTSLWVAWIFAVWMTEPKKADPAADAGSVRPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079306

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences