Metagenome Family F079304

Basic Information
Family ID	F079304
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	51 residues
Representative Sequence	MRAAVIFGLGTSPADLKPFQASSPTEWLQGLPASSSDADAILIFGGDGTIHR
Number of Associated Samples	108
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	35.34 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	87.07 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Bacteria (93.103 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (14.655 % of family members)
Environment Ontology (ENVO)	Unclassified (37.931 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.241 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.75% β-sheet: 18.75% Coil/Unstructured: 67.50%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00450	Peptidase_S10	12.07
PF02769	AIRS_C	4.31
PF00586	AIRS	2.59
PF00551	Formyl_trans_N	0.86
PF01594	AI-2E_transport	0.86
PF01479	S4	0.86
PF05694	SBP56	0.86
PF07859	Abhydrolase_3	0.86
PF01042	Ribonuc_L-PSP	0.86
PF12704	MacB_PCD	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2939	Carboxypeptidase C (cathepsin A)	Amino acid transport and metabolism [E]	12.07
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.86
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.86
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	87.93 %
Unclassified	root	N/A	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	38.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.28 %
Unclassified	root	N/A	6.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	23.28 %
Unclassified	root	N/A	6.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23.28 %
Unclassified	root	N/A	6.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.79 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	14.66 %
Unclassified	root	N/A	6.90 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.03 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.86 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.79 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	14.66 %
Unclassified	root	N/A	6.90 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.17 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	0.86 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.79 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	14.66 %
Unclassified	root	N/A	6.90 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.17 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	0.86 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.79 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	14.66 %
Unclassified	root	N/A	6.90 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.17 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.86 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104538411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300001593\|JGI12635J15846_10882458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300001593\|JGI12635J15846_10892798	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300003351\|JGI26346J50198_1023429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300004091\|Ga0062387_100512315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300004091\|Ga0062387_101780960	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300004152\|Ga0062386_101402765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300005289\|Ga0065704_10226909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	1055	Open in IMG/M
3300005536\|Ga0070697_101172145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300005554\|Ga0066661_10108092	All Organisms → cellular organisms → Bacteria → Acidobacteria	1671	Open in IMG/M
3300005591\|Ga0070761_10365519	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300006052\|Ga0075029_100229188	All Organisms → cellular organisms → Bacteria → Acidobacteria	1168	Open in IMG/M
3300006059\|Ga0075017_100634502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300006086\|Ga0075019_11023612	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300006162\|Ga0075030_101041688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300009519\|Ga0116108_1094685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	907	Open in IMG/M
3300009520\|Ga0116214_1243947	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300009523\|Ga0116221_1130066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300009523\|Ga0116221_1265730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	742	Open in IMG/M
3300009525\|Ga0116220_10054385	All Organisms → cellular organisms → Bacteria → Acidobacteria	1671	Open in IMG/M
3300009552\|Ga0116138_1192568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300009616\|Ga0116111_1024310	All Organisms → cellular organisms → Bacteria → Acidobacteria	2053	Open in IMG/M
3300009617\|Ga0116123_1008322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	3885	Open in IMG/M
3300009624\|Ga0116105_1030576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300009644\|Ga0116121_1228279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	594	Open in IMG/M
3300009683\|Ga0116224_10051695	Not Available	2006	Open in IMG/M
3300009762\|Ga0116130_1275085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	537	Open in IMG/M
3300010339\|Ga0074046_10698766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300010343\|Ga0074044_10764952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300010360\|Ga0126372_12427085	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300011269\|Ga0137392_10807437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300011270\|Ga0137391_11051510	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012363\|Ga0137390_10053375	All Organisms → cellular organisms → Bacteria	3924	Open in IMG/M
3300012582\|Ga0137358_10735670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300012922\|Ga0137394_10031643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4299	Open in IMG/M
3300012927\|Ga0137416_10822185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300012944\|Ga0137410_11828224	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300014155\|Ga0181524_10287812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	754	Open in IMG/M
3300014158\|Ga0181521_10126298	Not Available	1513	Open in IMG/M
3300014159\|Ga0181530_10625560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	525	Open in IMG/M
3300014493\|Ga0182016_10047629	All Organisms → cellular organisms → Bacteria → Acidobacteria	3382	Open in IMG/M
3300014638\|Ga0181536_10435551	Not Available	580	Open in IMG/M
3300017823\|Ga0187818_10086130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1356	Open in IMG/M
3300017823\|Ga0187818_10479786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300017925\|Ga0187856_1189515	Not Available	751	Open in IMG/M
3300017935\|Ga0187848_10297150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300017938\|Ga0187854_10228923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300017940\|Ga0187853_10025044	All Organisms → cellular organisms → Bacteria → Acidobacteria	3255	Open in IMG/M
3300017941\|Ga0187850_10090792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1495	Open in IMG/M
3300017955\|Ga0187817_10084896	All Organisms → cellular organisms → Bacteria → Acidobacteria	1982	Open in IMG/M
3300017972\|Ga0187781_10233325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1301	Open in IMG/M
3300017974\|Ga0187777_11100898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300017995\|Ga0187816_10134585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300018006\|Ga0187804_10489902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	552	Open in IMG/M
3300018007\|Ga0187805_10184988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300018012\|Ga0187810_10285668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300018013\|Ga0187873_1203101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	741	Open in IMG/M
3300018014\|Ga0187860_1174249	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300018015\|Ga0187866_1350480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	509	Open in IMG/M
3300018019\|Ga0187874_10379420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	571	Open in IMG/M
3300018020\|Ga0187861_10362820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	611	Open in IMG/M
3300018021\|Ga0187882_1088596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300018023\|Ga0187889_10447844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	554	Open in IMG/M
3300018024\|Ga0187881_10233149	Not Available	774	Open in IMG/M
3300018038\|Ga0187855_10743663	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300018040\|Ga0187862_10456721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	775	Open in IMG/M
3300018043\|Ga0187887_10279009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300018043\|Ga0187887_10934083	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300018058\|Ga0187766_10732014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300018088\|Ga0187771_10453502	All Organisms → cellular organisms → Bacteria → Acidobacteria	1083	Open in IMG/M
3300021086\|Ga0179596_10588017	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300021168\|Ga0210406_10354486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300021181\|Ga0210388_10678598	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300021479\|Ga0210410_10003197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	14572	Open in IMG/M
3300022521\|Ga0224541_1028327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300022872\|Ga0224526_1020585	All Organisms → cellular organisms → Bacteria → Acidobacteria	1509	Open in IMG/M
3300025459\|Ga0208689_1044856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	945	Open in IMG/M
3300025612\|Ga0208691_1085060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300025854\|Ga0209176_10118529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300026324\|Ga0209470_1086568	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300026355\|Ga0257149_1004338	All Organisms → cellular organisms → Bacteria → Acidobacteria	1674	Open in IMG/M
3300026469\|Ga0257169_1008274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1272	Open in IMG/M
3300027634\|Ga0209905_1046192	Not Available	679	Open in IMG/M
3300027648\|Ga0209420_1123535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300027676\|Ga0209333_1103279	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300027692\|Ga0209530_1218047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	523	Open in IMG/M
3300027812\|Ga0209656_10010267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5913	Open in IMG/M
3300027829\|Ga0209773_10177057	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300027853\|Ga0209274_10286261	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300027898\|Ga0209067_10256207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300027911\|Ga0209698_10069554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3013	Open in IMG/M
3300027911\|Ga0209698_11217197	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300028047\|Ga0209526_10671835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300028646\|Ga0302159_10070647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300028649\|Ga0302162_10007393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2483	Open in IMG/M
3300028747\|Ga0302219_10199877	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300028780\|Ga0302225_10486752	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	576	Open in IMG/M
3300028798\|Ga0302222_10435450	Not Available	513	Open in IMG/M
3300029882\|Ga0311368_10049257	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3858	Open in IMG/M
3300029954\|Ga0311331_11063054	Not Available	696	Open in IMG/M
3300029990\|Ga0311336_10084057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2504	Open in IMG/M
3300030003\|Ga0302172_10277424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300030508\|Ga0302185_10010393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4834	Open in IMG/M
3300030706\|Ga0310039_10190746	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	812	Open in IMG/M
3300031236\|Ga0302324_102117217	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300031708\|Ga0310686_114940435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300031718\|Ga0307474_10767475	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300031720\|Ga0307469_10523206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300031720\|Ga0307469_10790642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300031754\|Ga0307475_10137485	All Organisms → cellular organisms → Bacteria → Acidobacteria	1933	Open in IMG/M
3300031788\|Ga0302319_10006533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	23112	Open in IMG/M
3300032782\|Ga0335082_10264587	All Organisms → cellular organisms → Bacteria → Acidobacteria	1599	Open in IMG/M
3300032782\|Ga0335082_10275444	All Organisms → cellular organisms → Bacteria → Acidobacteria	1561	Open in IMG/M
3300032783\|Ga0335079_10675773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300032805\|Ga0335078_10820649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300033402\|Ga0326728_10443677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.14%
Host-Associated	Host-Associated	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.03%
Aquatic	Environmental → Aquatic	43.10%
Plants	Host-Associated → Plants	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.10%
Freshwater	Environmental → Aquatic → Freshwater	37.07%
Peat	Environmental → Terrestrial → Peat	12.93%
Sediment	Environmental → Aquatic → Sediment	6.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.86%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	37.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.34%
Loam	Environmental → Terrestrial → Soil → Loam	7.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	23.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.62%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	14.66%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.03%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.45%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.45%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.59%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.59%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.86%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.86%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.86%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_2	Environmental	Open in IMG/M
3300028649	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030508	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_2	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079304

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1045384112	3300000364	Soil	MRAAAIFGLGTSPKSLDPFRANTVAEWSEGVPASSSDADAILIF
JGI12635J15846_108824581	3300001593	Forest Soil	MRTAVIFGLGTAPADLAPFQSRSSTEWLQGLPSSAKGAD
JGI12635J15846_108927982	3300001593	Forest Soil	MRAAVIFGLGTSPADLKPFQAGSTTEWLQGLPAASGDADAIL
JGI26346J50198_10234291	3300003351	Bog Forest Soil	MRTAVIFGLGTSPADLRRFQAGSPAEWIQGLPGSSNDADAILIFGGDGTVHRHLPALVR
Ga0062387_1005123151	3300004091	Bog Forest Soil	MRAAVIFGLGTSPAGLKPFQAGSPTEWLQGLPATSSDADAIIIFGGDGTIHRH
Ga0062387_1017809601	3300004091	Bog Forest Soil	MRAAVIFGLGTSQADLKPFQAGSRTEWLHGLPASSSGSDADAILIFGGDGTIHRHLPALVRLQ
Ga0062386_1014027652	3300004152	Bog Forest Soil	MRAAVIFGLGTSQADLKPFQAGSRTEWLHGLPASSSGSDADAIL
Ga0065704_102269092	3300005289	Switchgrass Rhizosphere	MRTAAILGLGCRPQSLDPFRSTSTTTWSLGLPASHSDADAIAIFGGDGTLH
Ga0070697_1011721451	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRAAVIFGLGTSPTNLNAFRAGSATEWSEGVPTSSSDADAILIFGGDGTIHRHLPALVR
Ga0066661_101080922	3300005554	Soil	MLNAELMRAAVIFGLGASPADLKPFQTGSRAEWLQGLPASSGDADAILIFGGDGTMHRHLPA
Ga0070761_103655192	3300005591	Soil	MRAAVIFGLGTSPDELKPFQSSSPTKWFQGLPASSAGQDSGADAILIFGGDGTIHRHLTALV
Ga0075029_1002291885	3300006052	Watersheds	MRAAAIFGLGTSPAHLKPFQEGGPVEFVEGLPASS
Ga0075017_1006345022	3300006059	Watersheds	MRAAAIFGLGTSPGDLKQFQAGSSTSWLDGLPSSSGDADAVLLF
Ga0075019_110236121	3300006086	Watersheds	MRAAVIFGLGTSPADLKPFQAGSPTKWLQGLPASSGDADAILVFGGDGTIHRHLPALV
Ga0075030_1010416881	3300006162	Watersheds	MRAAVIFGLGTSQADLRPFQTGSPTKWQPGLPASSSDADAILI
Ga0116108_10946853	3300009519	Peatland	MRAAAIFGLGTSPADLKPFQAGSPTEWLPGLPASSSEADVIVIFGGDG
Ga0116214_12439471	3300009520	Peatlands Soil	MRAAVIFGLGTSQADLKPFQSGSPTKWLQGLPASSGDADAILIFGGDGTIHRHL
Ga0116221_11300661	3300009523	Peatlands Soil	MRAAVIFGLGTSPEDLKLFQDGSPTKWIQGLPASSTDRDCGADAILIFG
Ga0116221_12657301	3300009523	Peatlands Soil	MRAAVIFGLGTSPADLKPFQASSPTEWLQGLPASSSDADAIL
Ga0116220_100543851	3300009525	Peatlands Soil	MRAAVIFGLGTSPADLKLFQAGSATGWSQGLPTSTGDADAILIFGGDGTIHRHLPALVR
Ga0116138_11925681	3300009552	Peatland	MRAAVIFGLGTSPADLKPFQGNSPTEWLQGLPTSSSDADAMLIF
Ga0116111_10243102	3300009616	Peatland	MRAAVIFGLGTSPADLKPFQAGTPTEWLLGLPAPSSDADAVLIF
Ga0116123_10083221	3300009617	Peatland	MRAAAIFGLGTSPADLKPFQAGSPTEWLPGLPASSSEADVI
Ga0116105_10305762	3300009624	Peatland	MRAAVIFGLGTSPADLKPFQANSPTEWLQGLPADSSAADAILIF
Ga0116121_12282791	3300009644	Peatland	MRAAVIFGLGTSPADLRPFQAGSRAEWLQGLPASSGGSDVDAILIFGGDGTIHRHLPALVRLQL
Ga0116224_100516953	3300009683	Peatlands Soil	MRAAVIFGLGTSPADLKPFQASSPTEWLQGLPASSSDADAILIFGGDGTIHR
Ga0116130_12750851	3300009762	Peatland	MRAAAIFGLGTSPADLKLFQGSSPTEWLQGLPTSSSDADAILIFGGDGTIHRHLPALVR
Ga0074046_106987661	3300010339	Bog Forest Soil	MRAAAIFGLGTSPADLKPFQAGSLTEWLQGLPASSGDADAILIFGGDGTIHRHLPALVRLQL
Ga0074044_107649521	3300010343	Bog Forest Soil	MRAAVIFGLGTSQADLKPFQAGSRTEWLHGLPASSSGSDADAILI
Ga0126372_124270852	3300010360	Tropical Forest Soil	MRAAAIFGLGSSPDDLKPFQQDSKIDWSIGLPAISDNTDVILIFGGDGTIH
Ga0137392_108074372	3300011269	Vadose Zone Soil	MRVAVIFGLGTSPTDLKPFQTGSRSEWLPGLPASSGDADAILIFGGDGTIHRHLPALVRLHL
Ga0137391_110515102	3300011270	Vadose Zone Soil	MRAATIFGLGTSPANLASLRAGSPTEWSEGVPVSSRDADAIVIFG
Ga0137390_100533754	3300012363	Vadose Zone Soil	MRAAVILGLGTSPANLASFRAGSATEWSEGVPTSSRHADAILIFGGDGTIHRHLPALVRL
Ga0137358_107356702	3300012582	Vadose Zone Soil	MRAAVIFGLGTSPTTLKVFQAGSATEWIEGVPTSSSDADAILIFGGDGTI
Ga0137394_100316433	3300012922	Vadose Zone Soil	MRAAVILGLGTSPKNLNPFRRGSNTDWIEGVPASSSDADAILIFGGDGTIHR
Ga0137416_108221851	3300012927	Vadose Zone Soil	MRAAVIFGLGASPADLKPFQTGSRAEWLQGLPASSGDADAILIF
Ga0137410_118282241	3300012944	Vadose Zone Soil	MRAAVIFGLGPSPTNLGLFKDASPTEWIEGVPASSNDADAILIFGGDGTLHRHLPALARLKLPVL
Ga0181524_102878122	3300014155	Bog	MRAAVIFGLGTSPADLRPFQAGSRAEWLQGLPASSGGSDVDAILIFGGDGTIHRHLPALV
Ga0181521_101262981	3300014158	Bog	MRAAAIFGLGTSPADLKPFQAGSPTEWLPGLPASSSEADVIVIFGGD
Ga0181530_106255602	3300014159	Bog	MRAAVIFGLGTSPADLKPFQAGSRTEWLQGLPASSGGSDVDAILIFGGDGTIHRHLPALVRL
Ga0182016_100476291	3300014493	Bog	MRAAVIFGLGTSPADLRPFQTDSRTEWLEGLPAASSDADAILIFGGDGTIH
Ga0181536_104355511	3300014638	Bog	MRAAVIFGLGTSPADLRPFQASSPTRWLEGLPSSSNDADAILIFGGDGTIHRHL
Ga0187818_100861302	3300017823	Freshwater Sediment	MRAAAIFGLGTSLADLKPFQAGYTTEWVQGLPASITDADAILIFGGDG
Ga0187818_104797861	3300017823	Freshwater Sediment	MRAAVIFGLGTSPADLKPFQAGTPTEWLLGLPASSADVDAILIFGGDGTIHRHLP
Ga0187856_11895152	3300017925	Peatland	MRAAVIFGLGTSPADLRPFQAGSRAEWLQGLPASSGGSDVDAILIFGGDGTIHR
Ga0187848_102971502	3300017935	Peatland	MRAAVIYGLGASPASLKPFQACGPTEWQEGLPASSDDADAILIFGGDGTIHRHLPALV
Ga0187854_102289232	3300017938	Peatland	MRAAVIFGLGTSPADLKPFQAGSSTEWLLGLPASSDGGDADAILVFGGDGTIHRHLPSLVRLQLPVLIVPA
Ga0187853_100250441	3300017940	Peatland	MRAAVIFGLGTSPADLRPFQTDSRTEWLEGLPAASSDADAILIFGGVGTIHRHLTALVR
Ga0187850_100907921	3300017941	Peatland	MLAAAIFGLGTSPADLKPFQAGSPTKWLQGLPASSGDADAILIFGGDGTIHRHLPALV
Ga0187817_100848961	3300017955	Freshwater Sediment	MRDAAIFGLGTSPGDLKQFQAGSSTRWLDGLPGSSSE
Ga0187781_102333251	3300017972	Tropical Peatland	MRAAVIFGLGTSPAALEPFQSDSQTEWLQGLPVSSDDADAILIFGGDGTI
Ga0187777_111008982	3300017974	Tropical Peatland	MRAAAIFGLGTSPAQLKRFQSRSRAQWIEGLPAFASDADAVLIFGGDGTIHR
Ga0187816_101345852	3300017995	Freshwater Sediment	MRAAAILGFGTSPKDLKQFQAGSSTQWVEGLPGSPSDADAVLVFGGDGTIHRHLGALVRLQLPVLV
Ga0187804_104899021	3300018006	Freshwater Sediment	MRAAVIFGLGTSPTDLKPFQANSPTEWLQGLPASSSDADAILIFGGD
Ga0187805_101849882	3300018007	Freshwater Sediment	MRAAAILGLGTSPSDLQPFQARSTTEWSEGLPAAASDADAIVIFGGDGTI
Ga0187810_102856682	3300018012	Freshwater Sediment	MRAAVIFGLGTSPADLKPFEVSSPTEWLQGLPASSSDADAVLIFGGDGTI
Ga0187873_12031012	3300018013	Peatland	MRAAVIFGLGTSPADLRPFQAGSRAEWLQGLPASSDGSDGGGSDVDAILIFGGDGTIHRHLPALVRLQL
Ga0187860_11742491	3300018014	Peatland	MRAAVIFGLGTSPADLKPFQAGYPIEWLQGLPASSTDA
Ga0187866_13504801	3300018015	Peatland	MRAAVIFGLGTSPADLKPFQASSRTEWLQGLPASSDGSDVDAIILFGGDGTIHRHLPALV
Ga0187874_103794201	3300018019	Peatland	MRAAVIFGLGTSPADLKPFQASSPAEWLQGLPASSSDADAILIFGGDGTIHRHLPAL
Ga0187861_103628201	3300018020	Peatland	MRAAVIFGLGTSPADLKPFQASSPTEWLQGLPASSNDADAILIFGGDGTIHRHLPA
Ga0187882_10885961	3300018021	Peatland	MRAAVIFGLGTSPVDLKPFQGNSPTEWLQGLPTSSSDADAILVFGGDGTIHRHLPALV
Ga0187889_104478441	3300018023	Peatland	MRAAVIFGLGTSPADLKPFQASSPTEWIQGLPASSSDADAILIFGGDGTIHR
Ga0187881_102331492	3300018024	Peatland	MRAAVIFGLGTSPADLKPFQASSPTEWIQGLPASSSDADAILIFGGDGTIHRHLPALVR
Ga0187855_107436631	3300018038	Peatland	MRAAVIFGLGTSPSDLKPFQTNSPTEWLQGLPAAPADADAILIFGGDGTIHRHLPA
Ga0187862_104567211	3300018040	Peatland	MRAAVIFGLGTSPADLKPFQACSRTEWLQGLPASSGGSDVDAILIFGGDGTIHRHLPALVRLQL
Ga0187887_102790092	3300018043	Peatland	MRAAAIFGLGTSSHDLDLFKANSPTEWREGLPAFSNEADAIVIFGGDGTVHR
Ga0187887_109340831	3300018043	Peatland	MRAAVIFGLGTSPADLKPFQTGSPTKWLQGLPASSSEADVILIFGGDDTIHRHLPALVRLQLPVL
Ga0187766_107320142	3300018058	Tropical Peatland	MRAAAIFGLGTSPGNLEPFRAGSSTSWMQGLPATASDADAVLIFGG
Ga0187771_104535021	3300018088	Tropical Peatland	MRAAAIFGLGTSPADLKAFQAGTSTTWFEGLPASSKDADAVVIFGGDGTIHRHLGALVRL
Ga0179596_105880171	3300021086	Vadose Zone Soil	MRVAVIFGLGTSPTDLKPFQTGSRSEWLPGLPASSGDADAILIFGGDGTIHRHLPALVRL
Ga0210406_103544862	3300021168	Soil	MRVATIFGLGTSPANLQPFRADSATQWIEGVPASSADADAILIFGGD
Ga0210388_106785982	3300021181	Soil	MRAAAIFGLGTSSIDLEPFQAHSATTWTEGLPGSSNDADAVVVFGGDGTIH
Ga0210410_1000319718	3300021479	Soil	MRAAVILGLGTSPADLKPFLTGSTTEWLHGLPAASNDADAILIIGGDGTI
Ga0224541_10283271	3300022521	Soil	MRTAVIFGLGTAPADLAPFQSRSSTEWLQGLPSSAKGADAIVIFGGDGTIHRHLQALVRLQLP
Ga0224526_10205852	3300022872	Soil	MRAAVIFGLGTSPADLRPFQTDSRTEWLEGLPAASSDADAILIFGGDGTI
Ga0208689_10448561	3300025459	Peatland	MRAAVIFGLGTSPADLRPFQAGSRAEWLQGLPASSGGSD
Ga0208691_10850602	3300025612	Peatland	VRAAVIFGLGTSPADLKPFQTGSRSEWIEGLPASSSDANAIVILGGDG
Ga0209176_101185291	3300025854	Arctic Peat Soil	MRAAVIFGLGTSPADLKLFQAGSATKWSQGLPTSSGDADAI
Ga0209470_10865681	3300026324	Soil	MRAAAIFGLGTSPANLASFQAGSTTEWIEGVPASSSDAD
Ga0257149_10043382	3300026355	Soil	MRAAVIFGLRTSPADLKPFQTGSTTEWLQGLPAASGDADA
Ga0257169_10082742	3300026469	Soil	MRAAVIFGLGTSPADLKPFETGSTTEWLQGLPAASGDAD
Ga0209905_10461921	3300027634	Thawing Permafrost	MRAAAIFGLGTSPADLKPFQGSSPTDWFQGLPAASSDADA
Ga0209420_11235352	3300027648	Forest Soil	VRAAVIFGLGTSPADLKPFQTGSRSEWIEGLPASSSDANAIVILGGDGT
Ga0209333_11032792	3300027676	Forest Soil	VRAAVIFGLGSSPGNLKPFQADSSTEWLEGLPASSDDADSI
Ga0209530_12180471	3300027692	Forest Soil	MRAAVIFGLGTSPADLKLFEANSPTEWLQGLPASSADADAILIFGGD
Ga0209656_100102675	3300027812	Bog Forest Soil	MRAAAIFGLGTSPENLNPFRTGSSTEWLEGLPASSADADAILIFGGDG
Ga0209773_101770571	3300027829	Bog Forest Soil	MRAAVIFGLGTSPSDLKPFQASSPAEWLQGLPASSSDANAVLILGGDGTIHRHLSALVRLQLP
Ga0209274_102862612	3300027853	Soil	MRAAIILGLGVSPADVKRFQAASSAEWLPGLPASASDADAIVIFGGDGTVHR
Ga0209067_102562072	3300027898	Watersheds	MRAAVIFGLGTSPADLKLFQAGSTTEWSQGLPTSSDDADAILIFG
Ga0209698_100695541	3300027911	Watersheds	MRAAVIFGLGTSQADLRPFQTGSPTKWQPGLPASSSDADAILIFGGDGTIHRH
Ga0209698_112171971	3300027911	Watersheds	MRATVIFGLGTSPADLKPFQDASPTKWLQGLPTSSSDADAVLVFGGDGTIHRHLPALVRL
Ga0209526_106718351	3300028047	Forest Soil	MRAAVIFGLGASPADLKPFQAGYTTQWLQGLPAASGDADAILIFGG
Ga0302159_100706472	3300028646	Fen	MRAAVIFGLGTSPANLRSFRVDSSTEWIEGVPESS
Ga0302162_100073931	3300028649	Fen	MRAAAVFGLGTSPAELNPFRAGSTTEWIEGVPASPAEADAILIFGGDGTIHRHLPALVRLGL
Ga0302219_101998771	3300028747	Palsa	VRAAVIFGLGSSPGKLQPFQADSSTEWLEGLPASSS
Ga0302225_104867521	3300028780	Palsa	MRAAVIFGLGISPSDLKPFQAGSRSQWLQGLPASSSDADAVLIFGGDGT
Ga0302222_104354502	3300028798	Palsa	MRAAVIFGLGISPSDLKPFQAGSRSQWLQGLPASSSDADAVL
Ga0311368_100492574	3300029882	Palsa	VRAAVIFGLGSSPGKLQPFQADSSTEWLEGLPASSSDA
Ga0311331_110630541	3300029954	Bog	MRVAVIFGLGTSPADLKPFQAGSSIEWRQGLPPASSDA
Ga0311336_100840573	3300029990	Fen	MRAAVIFGLGTSPANLRSFRVDSSTEWIEGVPESSDDADAVLIFGGD
Ga0302172_102774242	3300030003	Fen	MRAAVIFGLGTSSANLDSFRAGSAAEWIEGVPASSNDADAILIFGGDGTI
Ga0302185_100103931	3300030508	Bog	MRAAVIFGLGTSPADLRPFQTDSRTEWLEGLPAASSDADAILIFGGDGTIHRHLT
Ga0310039_101907461	3300030706	Peatlands Soil	MRAAVIFGLGTSPADLKPFQASSPTEWLQGLPASSSDADAILIFGGDGTIHRH
Ga0302324_1021172171	3300031236	Palsa	MRAAVIFGLGTSPATLKPFQSGSKTDWLQGLPASSG
Ga0310686_1149404352	3300031708	Soil	MRAAAIFGLGTSTQDLDRFRVGSATTWTEGLPASSSDADAVAIFGGDGTIH
Ga0307474_107674752	3300031718	Hardwood Forest Soil	MRAAVIFGLGTSPPELELFKANSPTEWLDGVPAASGEADAILIFGGDGTIH
Ga0307469_105232061	3300031720	Hardwood Forest Soil	MRAAVIFGLGTSPTNLNAFQAGSATEWIEGAPASSSDADAILIFGGDGTIH
Ga0307469_107906422	3300031720	Hardwood Forest Soil	MRAAVIFGLGTSPANLNAFQAGSATEWVEGVPASSSDADAIVIFGGDGTIHRHLPALV
Ga0307475_101374851	3300031754	Hardwood Forest Soil	VRAAVIFGLGTSSADLKPFQTGSTAEWLQGFPASSGDADA
Ga0302319_1000653321	3300031788	Bog	MRAAVIFGLGTSPADLRPFQTDSRTEWLEGLPAASSDADAILIFGGDGTIHRH
Ga0335082_102645872	3300032782	Soil	VGVFEDLSQHMRAAAIFGLGTSPRALAAFRAGSSAEWTEGVPGSPDGADAVLLFGGDGTIHRHL
Ga0335082_102754442	3300032782	Soil	MRAAAVFGLGTSPKNLEPFRAGSGTEWIEGVPASPSEADAVLIFGGDGTIH
Ga0335079_106757732	3300032783	Soil	MRAAAIFGLGTSPAELEIFRAGSATSWFEGLPASPREADAV
Ga0335078_108206491	3300032805	Soil	MRAAAIFGLGTSPPDLQPFQRGSSTTWIEGLPASAEDADAVVILGGDGTIHRH
Ga0326728_104436772	3300033402	Peat Soil	MRAAVILGLGTSPAALRPFQGSKTDWLQGLPASSNDADAILIF

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign