NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F079286

Metagenome / Metatranscriptome Family F079286

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079286
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 98 residues
Representative Sequence MPLKFRETGLALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Number of Associated Samples 108
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 9.73 %
% of genes near scaffold ends (potentially truncated) 39.66 %
% of genes from short scaffolds (< 2000 bps) 80.17 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (56.897 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.552 % of family members)
Environment Ontology (ENVO) Unclassified
(34.483 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.552 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.45%    β-sheet: 18.37%    Coil/Unstructured: 59.18%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF01522Polysacc_deac_1 6.90
PF02586SRAP 5.17
PF05239PRC 3.45
PF03401TctC 2.59
PF03466LysR_substrate 2.59
PF05974DUF892 2.59
PF13411MerR_1 1.72
PF06325PrmA 0.86
PF02371Transposase_20 0.86
PF03237Terminase_6N 0.86
PF13533Biotin_lipoyl_2 0.86
PF00353HemolysinCabind 0.86
PF00005ABC_tran 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 6.90
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 5.17
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 2.59
COG3685Ferritin-like metal-binding protein YciEInorganic ion transport and metabolism [P] 2.59
COG2264Ribosomal protein L11 methylase PrmATranslation, ribosomal structure and biogenesis [J] 0.86
COG2890Methylase of polypeptide chain release factorsTranslation, ribosomal structure and biogenesis [J] 0.86
COG3547TransposaseMobilome: prophages, transposons [X] 0.86
COG3897Protein N-terminal and lysine N-methylase, NNT1/EFM7 familyPosttranslational modification, protein turnover, chaperones [O] 0.86


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A56.90 %
All OrganismsrootAll Organisms43.10 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000891|JGI10214J12806_12248014Not Available807Open in IMG/M
3300001661|JGI12053J15887_10004663All Organisms → cellular organisms → Bacteria → Proteobacteria7082Open in IMG/M
3300001976|JGI24752J21851_1042732All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium609Open in IMG/M
3300002070|JGI24750J21931_1002175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2372Open in IMG/M
3300002568|C688J35102_118751274Not Available592Open in IMG/M
3300004463|Ga0063356_101799049Not Available920Open in IMG/M
3300004479|Ga0062595_100419454Not Available968Open in IMG/M
3300004480|Ga0062592_100994640Not Available766Open in IMG/M
3300004643|Ga0062591_101340949Not Available706Open in IMG/M
3300005147|Ga0066821_1006149All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae770Open in IMG/M
3300005165|Ga0066869_10001948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2329Open in IMG/M
3300005168|Ga0066809_10004277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2446Open in IMG/M
3300005185|Ga0066811_1004096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae876Open in IMG/M
3300005331|Ga0070670_100006731All Organisms → cellular organisms → Bacteria9743Open in IMG/M
3300005334|Ga0068869_101585079Not Available583Open in IMG/M
3300005339|Ga0070660_101112215Not Available669Open in IMG/M
3300005343|Ga0070687_100132029Not Available1443Open in IMG/M
3300005347|Ga0070668_100058824All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2974Open in IMG/M
3300005354|Ga0070675_101826016Not Available561Open in IMG/M
3300005356|Ga0070674_100693866All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales869Open in IMG/M
3300005456|Ga0070678_100447870All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300005549|Ga0070704_101130937Not Available712Open in IMG/M
3300005549|Ga0070704_101500769Not Available620Open in IMG/M
3300005577|Ga0068857_101123928Not Available759Open in IMG/M
3300005616|Ga0068852_101096408Not Available816Open in IMG/M
3300005719|Ga0068861_100385725All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1239Open in IMG/M
3300006038|Ga0075365_10032196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3369Open in IMG/M
3300006163|Ga0070715_10044817All Organisms → cellular organisms → Bacteria → Proteobacteria1872Open in IMG/M
3300006606|Ga0074062_10630476Not Available556Open in IMG/M
3300006871|Ga0075434_100166623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2223Open in IMG/M
3300006904|Ga0075424_100020147All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6822Open in IMG/M
3300006953|Ga0074063_10093141All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5143Open in IMG/M
3300007788|Ga0099795_10491362Not Available571Open in IMG/M
3300009098|Ga0105245_11228890Not Available797Open in IMG/M
3300009100|Ga0075418_10008892All Organisms → cellular organisms → Bacteria → Proteobacteria11263Open in IMG/M
3300009101|Ga0105247_10319904Not Available1082Open in IMG/M
3300009156|Ga0111538_10266983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2166Open in IMG/M
3300009553|Ga0105249_11662674Not Available711Open in IMG/M
3300010159|Ga0099796_10464126Not Available565Open in IMG/M
3300010375|Ga0105239_10669502All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1186Open in IMG/M
3300010396|Ga0134126_11381302Not Available779Open in IMG/M
3300010401|Ga0134121_11526872Not Available684Open in IMG/M
3300012898|Ga0157293_10149343Not Available659Open in IMG/M
3300012907|Ga0157283_10041301Not Available1010Open in IMG/M
3300012911|Ga0157301_10090315Not Available880Open in IMG/M
3300012960|Ga0164301_10837179Not Available707Open in IMG/M
3300012989|Ga0164305_10347692All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1115Open in IMG/M
3300013308|Ga0157375_10034857All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4798Open in IMG/M
3300013308|Ga0157375_11749836Not Available736Open in IMG/M
3300014968|Ga0157379_10606113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1023Open in IMG/M
3300015371|Ga0132258_10198889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4860Open in IMG/M
3300015373|Ga0132257_100453341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1567Open in IMG/M
3300015374|Ga0132255_101231284Not Available1128Open in IMG/M
3300017792|Ga0163161_11377918Not Available615Open in IMG/M
3300017965|Ga0190266_10914092Not Available577Open in IMG/M
3300018000|Ga0184604_10181312Not Available712Open in IMG/M
3300018028|Ga0184608_10042845Not Available1754Open in IMG/M
3300018031|Ga0184634_10170061Not Available985Open in IMG/M
3300018051|Ga0184620_10281263Not Available560Open in IMG/M
3300018067|Ga0184611_1036386All Organisms → cellular organisms → Bacteria → Proteobacteria1598Open in IMG/M
3300018067|Ga0184611_1148666All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium829Open in IMG/M
3300018072|Ga0184635_10143487All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium953Open in IMG/M
3300018073|Ga0184624_10028456Not Available2144Open in IMG/M
3300018073|Ga0184624_10125442All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1115Open in IMG/M
3300018073|Ga0184624_10391282Not Available618Open in IMG/M
3300018076|Ga0184609_10079959Not Available1444Open in IMG/M
3300018082|Ga0184639_10460155Not Available650Open in IMG/M
3300018083|Ga0184628_10096612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1517Open in IMG/M
3300018476|Ga0190274_10507191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1208Open in IMG/M
3300018481|Ga0190271_10066332All Organisms → cellular organisms → Bacteria → Proteobacteria3162Open in IMG/M
3300019356|Ga0173481_10314365Not Available734Open in IMG/M
3300019887|Ga0193729_1062448Not Available1488Open in IMG/M
3300021510|Ga0222621_1110885Not Available583Open in IMG/M
3300022756|Ga0222622_11299705Not Available535Open in IMG/M
3300022883|Ga0247786_1034139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria998Open in IMG/M
3300025885|Ga0207653_10209428Not Available737Open in IMG/M
3300025900|Ga0207710_10002063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales9529Open in IMG/M
3300025901|Ga0207688_10086483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1796Open in IMG/M
3300025905|Ga0207685_10055821Not Available1543Open in IMG/M
3300025918|Ga0207662_10000980All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales13290Open in IMG/M
3300025919|Ga0207657_11201068Not Available576Open in IMG/M
3300025920|Ga0207649_11448664Not Available544Open in IMG/M
3300025922|Ga0207646_10313218All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300025926|Ga0207659_11005054Not Available718Open in IMG/M
3300025928|Ga0207700_11476005Not Available604Open in IMG/M
3300026095|Ga0207676_10270262All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1539Open in IMG/M
3300026118|Ga0207675_100296914All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1573Open in IMG/M
3300026121|Ga0207683_10447595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1191Open in IMG/M
3300027181|Ga0208997_1037212All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300027480|Ga0208993_1012757All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.11455Open in IMG/M
3300027560|Ga0207981_1016679All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1318Open in IMG/M
3300027903|Ga0209488_10021667All Organisms → cellular organisms → Bacteria4667Open in IMG/M
3300028608|Ga0247819_10258505Not Available960Open in IMG/M
3300028708|Ga0307295_10014140Not Available1913Open in IMG/M
3300028712|Ga0307285_10090148Not Available802Open in IMG/M
3300028718|Ga0307307_10070026Not Available1045Open in IMG/M
3300028719|Ga0307301_10100050Not Available918Open in IMG/M
3300028721|Ga0307315_10028964Not Available1471Open in IMG/M
3300028754|Ga0307297_10038148Not Available1444Open in IMG/M
3300028778|Ga0307288_10232566Not Available718Open in IMG/M
3300028782|Ga0307306_10077941Not Available860Open in IMG/M
3300028790|Ga0307283_10159400Not Available627Open in IMG/M
3300028881|Ga0307277_10088821Not Available1301Open in IMG/M
3300031114|Ga0308187_10421650Not Available532Open in IMG/M
3300031226|Ga0307497_10076578All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1247Open in IMG/M
3300031366|Ga0307506_10274106All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium650Open in IMG/M
3300031740|Ga0307468_100088336All Organisms → cellular organisms → Bacteria → Proteobacteria1796Open in IMG/M
3300031908|Ga0310900_11345992Not Available598Open in IMG/M
3300031908|Ga0310900_11352360Not Available597Open in IMG/M
3300032013|Ga0310906_11270492Not Available537Open in IMG/M
3300033412|Ga0310810_10089097All Organisms → cellular organisms → Bacteria → Proteobacteria3701Open in IMG/M
3300033550|Ga0247829_10745048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium816Open in IMG/M
3300034354|Ga0364943_0166220All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium801Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.55%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment11.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.03%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.31%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.45%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.59%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.59%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.59%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.59%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.72%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.86%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.86%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.86%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.86%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300001976Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7Host-AssociatedOpen in IMG/M
3300002070Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4Host-AssociatedOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005147Soil and rhizosphere microbial communities from Laval, Canada - mgLMCEnvironmentalOpen in IMG/M
3300005165Soil and rhizosphere microbial communities from Laval, Canada - mgHMCEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005185Soil and rhizosphere microbial communities from Laval, Canada - mgHPBEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027480Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10214J12806_1224801413300000891SoilGRNCFRYRMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
JGI12053J15887_1000466353300001661Forest SoilMPLHFRPTGPAFPHEETPKDCTAFSGGWAVGFIYCEAGESGREGPHTWFWSIHGIFSKPIDMRGQGTARTLEDAKAYLEENWQRWLRWANLKEIANKDDVGTKTPPTG*
JGI24752J21851_104273213300001976Corn, Switchgrass And Miscanthus RhizosphereMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETW
JGI24750J21931_100217513300002070Corn, Switchgrass And Miscanthus RhizosphereMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWANLKE
C688J35102_11875127423300002568SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTN
Ga0063356_10179904913300004463Arabidopsis Thaliana RhizosphereMPLKFRETGLALSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHALSGKPADIRGHGAAPTLEAAQAELEANWQKWLRWAGLKEIALDRS*
Ga0062595_10041945423300004479SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0062592_10099464023300004480SoilCNDAAAWVGRLRYGYRMPLKFRETGLALSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0062591_10134094913300004643SoilMPLKFRETGLALSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDRS*
Ga0066821_100614923300005147SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG*
Ga0066869_1000194833300005165SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKEKGPEG*
Ga0066809_1000427733300005168SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG
Ga0066811_100409613300005185SoilMPLKFRETGLALSPTEIRKDCTAFCGAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG*
Ga0070670_10000673133300005331Switchgrass RhizosphereLRYGYRMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0068869_10158507913300005334Miscanthus RhizospherePLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEASQADLEANWQKWLRWAGLKEIALDGS*
Ga0070660_10111221513300005339Corn RhizosphereMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0070687_10013202943300005343Switchgrass RhizosphereFRYRMPLKFRETGLALSSTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0070668_10005882413300005347Switchgrass RhizosphereRYRMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0070675_10182601613300005354Miscanthus RhizosphereLRYGYRMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDG
Ga0070674_10069386623300005356Miscanthus RhizosphereMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG*
Ga0070678_10044787033300005456Miscanthus RhizosphereEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0070704_10113093723300005549Corn, Switchgrass And Miscanthus RhizosphereMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0070704_10150076913300005549Corn, Switchgrass And Miscanthus RhizosphereMPLKFRETGLALSPHEIRKDCTALSGDWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS*
Ga0068857_10112392813300005577Corn RhizosphereYRMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0068852_10109640813300005616Corn RhizosphereLRYGYRMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDRS*
Ga0068861_10038572523300005719Switchgrass RhizosphereLRYGYRMPLKFRETGLALSPHEIRKDCTALSGDWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0075365_1003219633300006038Populus EndosphereLRYGYRMPLKFRETGLALSPHEIRKDCTACSGEWAVGYIYREAPEEDGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS*
Ga0070715_1004481743300006163Corn, Switchgrass And Miscanthus RhizosphereARGRNCFRYRMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0074062_1063047623300006606SoilRNCFRYRMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0075434_10016662323300006871Populus RhizosphereLRYGYRMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEERGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS*
Ga0075424_10002014773300006904Populus RhizosphereLRYGYRMPLKFRETGLALSPHEIRKDCTACSGEWAVGYIYREAPEEDGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0074063_1009314163300006953SoilMPLKFRETGVALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0099795_1049136213300007788Vadose Zone SoilMPLKFRETGLALSPTEICKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG*
Ga0105245_1122889013300009098Miscanthus RhizosphereRYRMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0075418_1000889293300009100Populus RhizosphereMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADSRGHGAAPSLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0105247_1031990423300009101Switchgrass RhizosphereMPLKFRETGLALSPHEIRKDCTALSGDWAVGYIYREAPEERGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS*
Ga0111538_1026698323300009156Populus RhizosphereMPLKFRETGLALSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0105249_1166267413300009553Switchgrass RhizosphereMPLKFRETGLALSPHEIRKDCTALSGDWAVGYIYREAPEERGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0099796_1046412613300010159Vadose Zone SoilMPLKFRETGLALSPTEICKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQSWLTWANLKETGPEG*
Ga0105239_1066950223300010375Corn RhizosphereMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEDGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS*
Ga0134126_1138130213300010396Terrestrial SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPKG*
Ga0134121_1152687223300010401Terrestrial SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIPGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0157293_1014934313300012898SoilMPLKFRETGLTLSPHEIRKDCTACSGEWAVGYIYREAPEEDGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS*
Ga0157283_1004130113300012907SoilMPLKFRETGLTLSPHEIRKDCTACSGEWAVGYIYREAPEEDGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQAELEANWQKWLRWAGLKEIALDGS*
Ga0157301_1009031513300012911SoilMPLKFRETGLALSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHALSGKPADIRGHGAAPTLEAAQAELEANWQKWLRWAGLKEIALDGS*
Ga0164301_1083717913300012960SoilMPLKFRETGLALSPREIRKDCTPFSGDWAVGYIYREAPEERGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS*
Ga0164305_1034769213300012989SoilRRVGGAIAYGYRMPLKFRETGLALSPREIRKDCTAFSGDWAVGYIYREAPEERGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS*
Ga0157375_1003485753300013308Miscanthus RhizosphereMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGRGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0157375_1174983613300013308Miscanthus RhizosphereRMPLKFRETGLALSPHEIRKDCTALSGDWAVGYIYREAPEERGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0157379_1060611313300014968Switchgrass RhizosphereETGLALSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0132258_1019888983300015371Arabidopsis RhizosphereGRLRYGYRMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0132257_10045334113300015373Arabidopsis RhizosphereMPLKFRETGLALSPHEIRKDCTACSGDWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS*
Ga0132255_10123128423300015374Arabidopsis RhizosphereMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEARERLGDCEAGEGHGDEPPSWFWSIHGGLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG*
Ga0163161_1047894813300017792Switchgrass RhizosphereDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG
Ga0163161_1137791813300017792Switchgrass RhizosphereRMPLKFRETGLALSPHEIRKDCTALSGDWAVGYIYREAPEERGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDES
Ga0163161_1200952413300017792Switchgrass RhizosphereDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0190266_1091409213300017965SoilRMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIGMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0184604_1018131213300018000Groundwater SedimentMPLKFRETGLALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETEPEG
Ga0184608_1004284523300018028Groundwater SedimentMPLKFRETGLALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0184634_1017006123300018031Groundwater SedimentAARGRNCFRCGMPLKFRETGLALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTKANLKETGPEG
Ga0184620_1028126313300018051Groundwater SedimentMPLKFRDTGLALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0184611_103638633300018067Groundwater SedimentRYRMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0184611_114866613300018067Groundwater SedimentMPLKFRETGLALSPTESRKDCTAFSGGWAVRYIYYEAREGHGDEPHTWFWSIHGGLGKPIDMRSHGTARSLEDAKSYLEETWQRWLTWANLKETEPEG
Ga0184635_1014348723300018072Groundwater SedimentMPLKFRETGLALSPTEIRKDCTAFCGGWAMGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETEPEG
Ga0184624_1002845613300018073Groundwater SedimentDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGGLGKPIDMRSHGTAGSLEDAKSCLEETWQRWLTWANLKETEPEG
Ga0184624_1012544213300018073Groundwater SedimentMPLKFRETGLALSPTEIRKHCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTW
Ga0184624_1039128213300018073Groundwater SedimentMPLKFRETGLALSLTESRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGGLGKPIDMRSHGTARSLEDAKSYLEETWQR
Ga0184609_1007995933300018076Groundwater SedimentMPLKFRETGLALSPTESRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETEPEG
Ga0184639_1046015513300018082Groundwater SedimentMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0184628_1009661213300018083Groundwater SedimentMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGGLGKPIDMRSHCTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0190274_1050719123300018476SoilMPLKFRETGLALSPTEIRKHCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0190271_1006633233300018481SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIGMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0173481_1031436513300019356SoilLRYGYRMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS
Ga0193729_106244823300019887SoilMPLKFRETGLALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDIRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0222621_111088513300021510Groundwater SedimentTGLALSPTESRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETEPEG
Ga0222622_1129970513300022756Groundwater SedimentMPLKFRETGLALSPTESRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGGLGKPIDMRSHGTARSLEDAKSYLEETWQRWLTWANRKETEPEG
Ga0247786_103413913300022883SoilVGGAIALRLQDASEVPRDRPRLVPTQIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS
Ga0207653_1020942813300025885Corn, Switchgrass And Miscanthus RhizosphereMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWYWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQR
Ga0207710_1000206373300025900Switchgrass RhizosphereMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKEKGPEG
Ga0207688_1008648323300025901Corn, Switchgrass And Miscanthus RhizosphereMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVVLTRPVELHTDGHEPTLEMAKARLKRNWDRWLEWSERTEAE
Ga0207685_1005582113300025905Corn, Switchgrass And Miscanthus RhizosphereARGRNCFRYRMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG
Ga0207662_10000980103300025918Switchgrass RhizosphereMPLKFRETGLALSPTEIGKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG
Ga0207657_1120106823300025919Corn RhizosphereALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKEKGPEG
Ga0207649_1144866413300025920Corn RhizosphereFRETGLTLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS
Ga0207646_1031321813300025922Corn, Switchgrass And Miscanthus RhizosphereMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLK
Ga0207659_1100505413300025926Miscanthus RhizosphereLRYGYRMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS
Ga0207700_1147600523300025928Corn, Switchgrass And Miscanthus RhizosphereGGAIAYGYRMPLKFRETGLALSPREIRKDCTAFSGDWAVGYIYREAPEERGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS
Ga0207676_1027026233300026095Switchgrass RhizosphereMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS
Ga0207675_10029691423300026118Switchgrass RhizosphereLRYGYRMPLKFRETGLALSPHEIRKDCTALSGDWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS
Ga0207683_1044759533300026121Miscanthus RhizosphereETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS
Ga0208997_103721223300027181Forest SoilMPLKFRQTGHPSPLDETRKDCTAFSGGWAVGFIYCEAGESGREGPHTWFWSIHGIFSKPIDMRGQGTARTLEDAKAYLEENWQRWLRWANLKEIANKDDVGTKTPPT
Ga0208993_101275723300027480Forest SoilMPLHFRPTGPAFPHEETPKDCTAFSGGWAVGFIYCEAGESGREGPHTWFWSIHGIFSKPIDMRGQGTARTLEDAKAYLEENWQRWLRWANLKEIANKDDVGTKTPPTG
Ga0207981_101667913300027560SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWL
Ga0209488_1002166723300027903Vadose Zone SoilMPLKFRETGLALSPTEICKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0247819_1025850523300028608SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG
Ga0307295_1001414043300028708SoilMPLKFRETGLALSPTESRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGGLGKPIDMRSHGTARSLEDAKSYLEETWQRWLTWANLKETEPEG
Ga0307285_1009014813300028712SoilMPLKFRETGLALSPTESRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGGLGKPIDMRSHGTARSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0307307_1007002613300028718SoilGRSCFRYRMPLKFRETGLALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0307301_1010005013300028719SoilMPLKFRETGLALSPTESRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGGLGKPIDMRSHGTARSLEDAKSYLEETWQRWLTWANLKE
Ga0307315_1002896433300028721SoilMPLKFRETALALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETEPEG
Ga0307297_1003814833300028754SoilMPLKFRETGLALSPTEIRKDCTGFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDIRGHGTAGSLEDAKSYLEETWQRWLTWANLKETEPEG
Ga0307280_1020468113300028768SoilDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0307288_1023256623300028778SoilIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGRPIDIRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0307306_1007794123300028782SoilKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETEPEG
Ga0307283_1015940013300028790SoilMPLKFRETGLALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTVGSLEDAKSYLEETWQRWLTWANLKETEPEG
Ga0307277_1008882133300028881SoilMPLKFRETGLALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETEPEGYRNQISPRAHPNRIRENDGSSRCRVRCHHRD
Ga0308187_1042165013300031114SoilMPLKFRETGLALSPTEIRKDCTAFSGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETEPAG
Ga0307497_1007657823300031226SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRSHGTAGSLEDAKSYLEEAWQRWLTWASLKETGPDG
Ga0307506_1027410623300031366SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPE
Ga0307468_10008833623300031740Hardwood Forest SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0310900_1134599223300031908SoilFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWTNLKETGPEG
Ga0310900_1135236013300031908SoilLALSPHEIRKDCTALSGDWAVGYIYREAPEERGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLSWAGLKEIALDGS
Ga0310906_1127049213300032013SoilLRYGYRMPLKFRETGLALSPHEIRKDCTALSGDWAVGYIYREAPEERGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANW
Ga0310810_1008909713300033412SoilGRLRYGYRMPLKFRETGLVLSPHEIRKDCTACSGEWAVGYIYREAPEEGGGEPRTWFWSLHGVSGKPADIRGHGAAPTLEAAQADLEANWQKWLRWAGLKEIALDGS
Ga0247829_1074504823300033550SoilMPLKFRETGLALSPTEIRKDCTAFCGGWAMGYIYYEAREGHGDEPHTWFWSIHGVLGKPTGMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETGPEG
Ga0364943_0166220_50_3463300034354SedimentMPLKFRETGLALSPTEIRKDCTAFCGGWAVGYIYYEAREGHGDEPHTWFWSIHGVLGKPIDMRGHGTAGSLEDAKSYLEETWQRWLTWANLKETEPEG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.