Metagenome / Metatranscriptome Family F079278

Basic Information
Family ID	F079278
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	44 residues
Representative Sequence	VIASKGGASEPPDTLLPGKAGGAVAVRRTLATTICRIADP
Number of Associated Samples	104
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.52 %
% of genes near scaffold ends (potentially truncated)	97.41 %
% of genes from short scaffolds (< 2000 bps)	93.97 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Bacteria (88.793 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.759 % of family members)
Environment Ontology (ENVO)	Unclassified (44.828 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.241 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.47% β-sheet: 0.00% Coil/Unstructured: 73.53%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02371	Transposase_20	83.62
PF04075	F420H2_quin_red	1.72
PF13683	rve_3	1.72
PF01548	DEDD_Tnp_IS110	0.86
PF13565	HTH_32	0.86
PF13701	DDE_Tnp_1_4	0.86
PF00872	Transposase_mut	0.86
PF00378	ECH_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	84.48
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.69 %
Unclassified	root	N/A	11.21 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	45.69 %
Unclassified	root	N/A	11.21 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.21 %
Unclassified	root	N/A	11.21 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.72 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.72 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	4.31 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.45 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.72 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	1.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.72 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.45 %
Hoeflea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea	2.59 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.72 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	1.72 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.86 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.86 %
Acidocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.45 %
unclassified Hoeflea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea → unclassified Hoeflea	2.59 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	1.72 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	1.72 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
Acidocella aminolytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → Acidocella aminolytica	0.86 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.86 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	3.45 %
Hoeflea sp. IMCC20628	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea → unclassified Hoeflea → Hoeflea sp. IMCC20628	2.59 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	1.72 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
unclassified Sinorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → unclassified Sinorhizobium	0.86 %
Mesorhizobium sp. L-2-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L-2-11	0.86 %
Mesorhizobium sp. LSJC280B00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	0.86 %
Acidocella aminolytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → Acidocella aminolytica	0.86 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	3.45 %
Hoeflea sp. IMCC20628	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea → unclassified Hoeflea → Hoeflea sp. IMCC20628	2.59 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	1.72 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
Sinorhizobium sp. CCBAU 05631	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → unclassified Sinorhizobium → Sinorhizobium sp. CCBAU 05631	0.86 %
Mesorhizobium sp. L-2-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L-2-11	0.86 %
Mesorhizobium sp. LSJC280B00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	0.86 %
Acidocella aminolytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → Acidocella aminolytica	0.86 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN01DY88E	Not Available	510	Open in IMG/M
3300000956\|JGI10216J12902_103338479	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300001162\|JGI12714J13572_1005361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300001867\|JGI12627J18819_10240760	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300004080\|Ga0062385_11283495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300004082\|Ga0062384_100763441	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300004479\|Ga0062595_100566182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L-2-11	875	Open in IMG/M
3300005093\|Ga0062594_101406304	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300005468\|Ga0070707_101257166	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005546\|Ga0070696_101213563	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005553\|Ga0066695_10862341	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005557\|Ga0066704_10693051	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005564\|Ga0070664_100143035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	2107	Open in IMG/M
3300005598\|Ga0066706_10264054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1344	Open in IMG/M
3300005614\|Ga0068856_100823225	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005764\|Ga0066903_100952272	Not Available	1562	Open in IMG/M
3300006163\|Ga0070715_10106554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	1316	Open in IMG/M
3300006172\|Ga0075018_10616208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300006606\|Ga0074062_10025322	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300006871\|Ga0075434_101447655	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300007265\|Ga0099794_10568222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300009038\|Ga0099829_11312572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300009038\|Ga0099829_11686041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	521	Open in IMG/M
3300009089\|Ga0099828_10113284	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2361	Open in IMG/M
3300009551\|Ga0105238_10451140	Not Available	1283	Open in IMG/M
3300010048\|Ga0126373_11040638	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300010398\|Ga0126383_10442597	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1347	Open in IMG/M
3300011269\|Ga0137392_10248378	Not Available	1464	Open in IMG/M
3300012096\|Ga0137389_11434270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300012096\|Ga0137389_11502331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300012203\|Ga0137399_11752588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300012929\|Ga0137404_10491996	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300012944\|Ga0137410_10419109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1082	Open in IMG/M
3300012957\|Ga0164303_10992467	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012984\|Ga0164309_11245922	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300012988\|Ga0164306_11920398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300016270\|Ga0182036_10870869	Not Available	737	Open in IMG/M
3300016294\|Ga0182041_12334837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	501	Open in IMG/M
3300016357\|Ga0182032_10652501	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300016371\|Ga0182034_11759766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300016371\|Ga0182034_11989028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	514	Open in IMG/M
3300016404\|Ga0182037_12108108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → Acidocella aminolytica	507	Open in IMG/M
3300016422\|Ga0182039_10133481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1894	Open in IMG/M
3300016422\|Ga0182039_10635523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea → unclassified Hoeflea → Hoeflea sp. IMCC20628	936	Open in IMG/M
3300016422\|Ga0182039_11038500	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300016445\|Ga0182038_11625167	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300018060\|Ga0187765_10146985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1327	Open in IMG/M
3300018422\|Ga0190265_12332849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300018476\|Ga0190274_10987661	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300019878\|Ga0193715_1053353	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300020199\|Ga0179592_10487256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	529	Open in IMG/M
3300021170\|Ga0210400_10280890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	1364	Open in IMG/M
3300021388\|Ga0213875_10565167	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300021401\|Ga0210393_10252286	Not Available	1431	Open in IMG/M
3300021432\|Ga0210384_11302068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300021474\|Ga0210390_11106623	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300025922\|Ga0207646_10757894	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300026078\|Ga0207702_11016044	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300026324\|Ga0209470_1182930	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300026557\|Ga0179587_10922772	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300027512\|Ga0209179_1087740	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300027521\|Ga0209524_1041744	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300027521\|Ga0209524_1051707	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300027565\|Ga0209219_1130104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300027812\|Ga0209656_10095693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1568	Open in IMG/M
3300027855\|Ga0209693_10616311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300027889\|Ga0209380_10516049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300027915\|Ga0209069_10457135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300030494\|Ga0310037_10255503	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031057\|Ga0170834_108693140	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300031545\|Ga0318541_10277830	Not Available	932	Open in IMG/M
3300031561\|Ga0318528_10672377	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031572\|Ga0318515_10133080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1319	Open in IMG/M
3300031668\|Ga0318542_10403067	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300031681\|Ga0318572_10365705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → unclassified Sinorhizobium → Sinorhizobium sp. CCBAU 05631	856	Open in IMG/M
3300031719\|Ga0306917_10193707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	1535	Open in IMG/M
3300031744\|Ga0306918_11437247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300031765\|Ga0318554_10480509	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300031768\|Ga0318509_10553310	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031780\|Ga0318508_1177192	Not Available	609	Open in IMG/M
3300031782\|Ga0318552_10024266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2723	Open in IMG/M
3300031798\|Ga0318523_10032851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2363	Open in IMG/M
3300031798\|Ga0318523_10109776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300031799\|Ga0318565_10030833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2423	Open in IMG/M
3300031821\|Ga0318567_10876144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300031831\|Ga0318564_10045559	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300031833\|Ga0310917_10296218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1093	Open in IMG/M
3300031835\|Ga0318517_10426950	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031880\|Ga0318544_10019641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2254	Open in IMG/M
3300031890\|Ga0306925_10349359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea → unclassified Hoeflea → Hoeflea sp. IMCC20628	1588	Open in IMG/M
3300031890\|Ga0306925_10786583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300031896\|Ga0318551_10676978	Not Available	597	Open in IMG/M
3300031910\|Ga0306923_12223076	Not Available	549	Open in IMG/M
3300031912\|Ga0306921_11080567	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300031939\|Ga0308174_11312749	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031942\|Ga0310916_10042545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3426	Open in IMG/M
3300031946\|Ga0310910_10300875	Not Available	1262	Open in IMG/M
3300031946\|Ga0310910_10375951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1124	Open in IMG/M
3300031946\|Ga0310910_11201953	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300031954\|Ga0306926_12106079	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300032001\|Ga0306922_12311562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300032025\|Ga0318507_10052424	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300032041\|Ga0318549_10374199	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300032054\|Ga0318570_10047545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1769	Open in IMG/M
3300032060\|Ga0318505_10234166	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300032063\|Ga0318504_10089210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1366	Open in IMG/M
3300032065\|Ga0318513_10531841	Not Available	575	Open in IMG/M
3300032065\|Ga0318513_10635359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300032066\|Ga0318514_10565688	Not Available	605	Open in IMG/M
3300032067\|Ga0318524_10182927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1068	Open in IMG/M
3300032180\|Ga0307471_103483099	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300032782\|Ga0335082_10456080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1142	Open in IMG/M
3300032783\|Ga0335079_10769907	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300033289\|Ga0310914_10165921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1957	Open in IMG/M
3300033289\|Ga0310914_10318610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea → unclassified Hoeflea → Hoeflea sp. IMCC20628	1403	Open in IMG/M
3300033290\|Ga0318519_10436412	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.83%
Host-Associated	Host-Associated	5.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.52%
Plants	Host-Associated → Plants	5.17%
Aquatic	Environmental → Aquatic	4.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.52%
Freshwater	Environmental → Aquatic → Freshwater	2.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.59%
Sediment	Environmental → Aquatic → Sediment	1.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.59%
Loam	Environmental → Terrestrial → Soil → Loam	10.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.86%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001162	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079278

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_07136430	2170459013	Grass Soil	VIASKGGAGEPFDTLLPGKAGGAAAVRRTLETTICRIADPTLVASLACYLERRT
JGI10216J12902_1033384792	3300000956	Soil	VITSQGGASEPPDTLLLGKAGGAVAVRRTLASTICRVAD
JGI12714J13572_10053612	3300001162	Forest Soil	MIAAEGGASEPPNIGLPGKAGGVVAVRRTLASTICRIADPTQVPRPRQLRD
JGI12627J18819_102407601	3300001867	Forest Soil	MIAAKGGASEPPNIGLPGKAGGAVAVRRTLACTICRIADPTQVPRPRQLRDVST
Ga0062385_112834951	3300004080	Bog Forest Soil	MITSKGGASEPSNMLHPGKAGGAVAVRRALASTICRIADPTQVSRPRQ
Ga0062384_1007634411	3300004082	Bog Forest Soil	MIASTAGGANDPSDTLLAGKAGGAVAVRRTLASTICRIADPTQV
Ga0062595_1005661822	3300004479	Soil	VIASKGGASEPSNTLRPGKAGGTVAVRRTLASTIRRITDPTQVARPRQLRD
Ga0062594_1014063041	3300005093	Soil	VIASKGGASETLNTLFTGKAGGTVTVRRTLASTICRIVDPTQVPRLR
Ga0070707_1012571661	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VIASKGGASEPPNTLQLGKAGGAAAVRRTLDTTICRIADPTLVARPRQLRDAST
Ga0070696_1012135632	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VIASEGGASEPSETLLPGKAGGAVAVRRTLASTICRIADPT
Ga0066695_108623411	3300005553	Soil	VTASKGGASEPPNTLLLGKAGGAAAVRRTLDTTICRVADPMHF*
Ga0066704_106930512	3300005557	Soil	VIASEGGAREPPDTLLPGKVGGAAAVRRTLANTICRIADP
Ga0070664_1001430354	3300005564	Corn Rhizosphere	MILIKGGAGEPYDLQLPGKAGGAVAVRRTLASTICR
Ga0066706_102640542	3300005598	Soil	MIAFKGGAGEPSDMRLPGKAGGAVAVRRTLASTICR
Ga0068856_1008232252	3300005614	Corn Rhizosphere	VIASKGGASEPFDMLLPGKAGGAAAVRRTLETTICRIADPM
Ga0066903_1009522723	3300005764	Tropical Forest Soil	MITRKGGASEPFDMLPPGKAGGAAAVRRTLAHTICRI
Ga0070715_101065541	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MIAATGGASEPPNIGLPGKAGGAVAVRRTLASTICRIADPTQV
Ga0075018_106162081	3300006172	Watersheds	MIAAKGGASEPFNMRLPGKAGGAVAVRRTLASTIC
Ga0074062_100253221	3300006606	Soil	MIAAKGGASEPLNLGLPGKAGGAAAVRRTLDTTICRIADP
Ga0075434_1014476552	3300006871	Populus Rhizosphere	VIASKGGASEPFDMLMPGKAGGAAAARRTLDTTICRI
Ga0099794_105682221	3300007265	Vadose Zone Soil	MSAAKGGASEPPNMRLPGKAGGTVAVRRTLASTICRI
Ga0099829_113125721	3300009038	Vadose Zone Soil	VITSKGGASEPSDTLLPGKAGGTVAVRRTLASTICRVADLTQV
Ga0099829_116860411	3300009038	Vadose Zone Soil	MILFKGGAGEPSDMRLPGKAGGAVAVRRTLASTICRITDPTQV
Ga0099828_101132841	3300009089	Vadose Zone Soil	VITSKGGANEPSDTLLPGKAGGTVAVRRTLASTICRVADLTQVAR
Ga0105238_104511402	3300009551	Corn Rhizosphere	MILIKGGAGEPYNLQLPGKAGGAVAVRRTLASTICRIADPTQVPR
Ga0126373_110406381	3300010048	Tropical Forest Soil	VSVSKGGASETPDTLLLGKAGGAVAVRRTLASTICRVADPTQVPRPRQL
Ga0126383_104425973	3300010398	Tropical Forest Soil	MIRSKGGASEPFDMRLPGKAGDAVAVRRTLASTICRIADPTQVPRPRQLRDA
Ga0137392_102483783	3300011269	Vadose Zone Soil	MILFKGGAGEPSDVRLPGKAGGAVAVRRTLAFTICRII
Ga0137389_114342702	3300012096	Vadose Zone Soil	VITSKGGASEPSDTLLPGKAGGTVAVRRTLASTICRVADLTQVARL
Ga0137389_115023311	3300012096	Vadose Zone Soil	KGGASEPSDTLLPGKAGGTVAVRRTLASTICRVAPI*
Ga0137399_117525882	3300012203	Vadose Zone Soil	VIASRGGASEPSDTLLPGKAGGTVAIRRTLASTICRVADLTQVARLR
Ga0137404_104919962	3300012929	Vadose Zone Soil	VIAAKGGASEPPDTLLLGKAGGAAAVRRTLDTTICRIADPMLVARPR*
Ga0137410_104191091	3300012944	Vadose Zone Soil	MIAAKGGASEPLNLGLPGKAGGAVAVRRTLASTICRIAVPTLVA
Ga0164303_109924671	3300012957	Soil	VIASEGGASEPPNTLLPGKAGGAAAVRRTLANTICRIADPMLVARPRQLRDASPVM
Ga0164309_112459221	3300012984	Soil	MILIKGGAGEPYDLQLPGKAGGAVAVRRTLASTICRIADPTQVP
Ga0164306_119203982	3300012988	Soil	VIASKGCASEPFDTLLPGKAGGAAAARRTLDTTICRISDPMLVARP
Ga0182036_108708691	3300016270	Soil	VIARKGGASKPSDTLLPGKAGGAVTVRRTLATTICRMF
Ga0182041_123348372	3300016294	Soil	VIVLQGGASEPSVTLLLGKAGGAAAVRRTLATTICRVDDPT
Ga0182032_106525012	3300016357	Soil	MIASKGGASEPADMLQLGKPGGTAAVRRTLASTICRAIGPTQGC
Ga0182034_117597661	3300016371	Soil	MIASKGGASEPADMLQLGKPGGTAAVRRTLASTICRAIGPTQVARL
Ga0182034_119890281	3300016371	Soil	VIASKGGASEPFDMLLPGKAGGAAAVRRTLETTICRI
Ga0182037_121081081	3300016404	Soil	MTAKGGASEPTDMLPPGTAGGAVAVRRTLASTIRWIADPTLVPRPRQLRDASTVMR
Ga0182039_101334813	3300016422	Soil	MTAKGGASKPTDMLPPGSAGGAVAVRRTLASTICR
Ga0182039_106355231	3300016422	Soil	VIASKGGASEPFDMLLPGKAGGAAAVRRTLETTICRISDPM
Ga0182039_110385001	3300016422	Soil	VIASQGGASESPDTLLLGKAGGVVAVRRTLASTICR
Ga0182038_116251671	3300016445	Soil	MTAKGGASKPTDMLPPGTAGGAVAVRRTLASTICRVTDPTQVPRPRH
Ga0187765_101469851	3300018060	Tropical Peatland	MIASKGGASEPADTLRLGKAGGTAAVRRTLASTICRAIGPMLVA
Ga0190265_123328491	3300018422	Soil	VVAVKGGASKPSDMLLPGKAGGAVAVRRTLASTICRIAD
Ga0190274_109876611	3300018476	Soil	VITSKGGANEPSDTLRPGKAGGTVAVRRTLASTICRIIDPTQ
Ga0193715_10533532	3300019878	Soil	VIVPRGGASEPSNTLLPGKAGGTVAVRRTLASTICRIADPTQVGNSATH
Ga0179592_104872562	3300020199	Vadose Zone Soil	MILFKGGASEPYDMRLPDKAGGAVAVRRTLASTICRIADPTQVPR
Ga0210400_102808901	3300021170	Soil	VIPFTGGASEPSNMLLPGKAGGTVAVRRTLACTICRIVDPTQV
Ga0213875_105651671	3300021388	Plant Roots	MIRPRGGASEPSNMRLPGKAGGAVAVRRTLASTICRVTDP
Ga0210393_102522861	3300021401	Soil	MIASKGGASEPADTLLLGKAGGAAAVRRTLASTICRAIGPMLVARPRQLRDA
Ga0210384_113020682	3300021432	Soil	VTTSKGGASEPSNTLLPGKAGGTVAVRRTLASTIRRIADPTQVPR
Ga0210390_111066231	3300021474	Soil	MIAFKGGADKPSDMLLPGKAGRAVTVRRILASTIC
Ga0207646_107578942	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VIASKGGASEPPNTLQLGKAGGAAAVRRILDTTIC
Ga0207702_110160441	3300026078	Corn Rhizosphere	VIASKGGASEPFDMLLPGKAGGAAAVRRTLETTICRIADPMLV
Ga0209470_11829301	3300026324	Soil	MIAFKGGAGEPSDMRLPGKAGGAVAVRRTLASTICWITGPT
Ga0179587_109227722	3300026557	Vadose Zone Soil	MIAFKGGASEPSDTLLPGKAGGAVAVRRTLASTICRIIDPTLAS
Ga0209179_10877402	3300027512	Vadose Zone Soil	VIASKGGASEPSDTLLPGKAGGAVAVRRTLASTICRIIDPTLASR
Ga0209524_10417441	3300027521	Forest Soil	VIPFTGGASEPSNMLLPGKAGGTVAVRRTLACTICRIVDPTQVARPR
Ga0209524_10517071	3300027521	Forest Soil	VIASKGGASEPPDTLLPGKAGGAVAVRRTLATTICRIADP
Ga0209219_11301041	3300027565	Forest Soil	VIASKGGASEPSDTLSPGKAGGTVAVRKTLASTIRRIADPTQVA
Ga0209656_100956931	3300027812	Bog Forest Soil	VITGKGGAGKTSHRRLPGSAGGTAAVRRTLATTICRIADP
Ga0209693_106163111	3300027855	Soil	VIASKGGASEPSDTLSPGKAGGTVAVRRTLASTIRRIADPTQVARPRQLRDVSTV
Ga0209380_105160491	3300027889	Soil	VIASKGGANEPSDTLLPGKAGGTVAVRRTLASTICRIADPTQ
Ga0209069_104571351	3300027915	Watersheds	VIASKGGASEPSNTLSPGKAGGTVAVRRTLASTIRRIADPTQVTR
Ga0310037_102555031	3300030494	Peatlands Soil	MIAATAGGASEPTDTLLPGKAGGAVAVRRTLASTICRIADPMQVARPRQLRD
Ga0170834_1086931401	3300031057	Forest Soil	VIASKGGASEPPNTLLPGKAGGAAAVRRTLASTICRIADPTL
Ga0318541_102778302	3300031545	Soil	MSTAKGGASQPPNMRLPGKAGGAVAVRRTLASTIC
Ga0318528_106723772	3300031561	Soil	VIASKGGASEPSDTLLPGKAGSAVAVRRTLASTICRVAD
Ga0318515_101330803	3300031572	Soil	VIASKGGASEPFDMLLPGKAGGAAAVRRTLETTICRISDPL
Ga0318542_104030671	3300031668	Soil	MIASKGGASEPADTLRLGKAGGTAAVRRTLASTIRRATGPTQVAR
Ga0318572_103657051	3300031681	Soil	MTAKGGASKPTDMLPPGTAGGAVAVRRTLASTIRWIGDPTL
Ga0306917_101937072	3300031719	Soil	ERNLPVIASQGGASEPPDMLPPGRAGGAVAVRRTLASTICQVADPTQVP
Ga0306918_114372471	3300031744	Soil	VVASKGGASKPSNTFFASRAGGTVAVRRTLATTICRVADPTQVSRPRQLRDA
Ga0318554_104805092	3300031765	Soil	VSVSKGGASESPDTLLLGKAGGAVAVRRTLASTICRVAD
Ga0318509_105533102	3300031768	Soil	MAAKGGASEPTDTLPPGNAGGAVAVRRTLASTICRVADPMLVARPRQLRDAST
Ga0318508_11771921	3300031780	Soil	MTAKGGASKPTDMLPPGSAGGAVAVRRTLASTICRIAD
Ga0318552_100242666	3300031782	Soil	MAAKGGASEPTDTLPPGSAGGAVAVRRTLASTICRVADPL
Ga0318523_100328511	3300031798	Soil	MAAKGGASEPTDTLPPGSAGGAVAVRRTLASTICRVADPLRTYG
Ga0318523_101097761	3300031798	Soil	MIASKGGASEPADTLRLGKAGGTAAVRRTLASTIRRATGLA
Ga0318565_100308333	3300031799	Soil	MTAKGGASKPTDMLPPGTAGGAVAVRRTLASTICRVTDPTQVPRPRHLR
Ga0318567_108761441	3300031821	Soil	MIPSKGGASEPSDMRLLGKAGGAVAVRRTLACTICRVIADPTQVPRPRQ
Ga0318564_100455591	3300031831	Soil	MILAKGGASEPPNIGLPGKAGGAVAVRRTLASTICRMTIPTQ
Ga0310917_102962181	3300031833	Soil	VSVSKGGASETPDTLLLGKAGGAVAVRRTLASTICRVADPTQVPRPRQLRDA
Ga0318517_104269502	3300031835	Soil	VSVSKGGASETPDTLLLGKAGGAVAVRRTLASTICRVADPTQVPR
Ga0318544_100196411	3300031880	Soil	MAAKGGASEPTDTLPPGSAGGAVAVRRTLASTICRVADPTL
Ga0306925_103493593	3300031890	Soil	VIASKGGASAPFDMLLPGKAGGAAAVRRTLETTICRISDPML
Ga0306925_107865833	3300031890	Soil	VSVSKGGASESPDTLLLGKAGGAVAVRRTLASTICRVADPTQVP
Ga0318551_106769782	3300031896	Soil	MTAKGGASKPTDMLPPGTAGGAVAVRRTLASTICRVTDPTQVPR
Ga0306923_122230761	3300031910	Soil	MTAKGGASEPTDMLPPGTAGGAVAVRRTLASTIRWIADPTLVPRPRQLRDAS
Ga0306921_110805673	3300031912	Soil	VSVSKGGASESPDTLLLGKAGGAVAVRRTLASTIC
Ga0308174_113127492	3300031939	Soil	MIAFKGGASEPSDTLLPGKAGGAVAVRRTLASTICRIIDPTLASRPRQLRDAS
Ga0310916_100425455	3300031942	Soil	MIASKGGASEPADMLQLGKPGGTAAVRRTLASTICRAIGPT
Ga0310910_103008752	3300031946	Soil	VIAAKGGASERANMLLLGKAGGAAAARRTLASTICRAI
Ga0310910_103759513	3300031946	Soil	VSVSKGGASETPDTLLLGKAGGAVAVRRTLASTIC
Ga0310910_112019532	3300031946	Soil	VSVSKGGASESPDMLLLGKAGGAVAVRRTLASTICRVADPTQVPRPRQL
Ga0306926_121060791	3300031954	Soil	VIASKGGASEPPDTLRPGKAGGAVAVRRTLATTICRVADPTQVARPRKLRD
Ga0306922_123115622	3300032001	Soil	MIASKGGASEPADMLQLGKPGGTAAVRRTLASTICRAIGPTQVARLRQLRDASTV
Ga0318507_100524244	3300032025	Soil	VIASKGGASEPFDMLLPGKAGGAAAVRRTLETTICRISDPMLVAR
Ga0318549_103741992	3300032041	Soil	VSASQGGASKPPDMLLPGKAGGAVAVSRTLASTICRVTDPTQVPRPRQLRDAS
Ga0318570_100475451	3300032054	Soil	VITSKGGASEPSDTLLPGRAGGAVAVRRTLASTICRIADP
Ga0318505_102341661	3300032060	Soil	VSVSKGGASESPDTLLLGKAGGAVAVRRTLASTICRVADPTQVPRPRQLRDA
Ga0318504_100892101	3300032063	Soil	MVASQGDAIESPNTLLPDKAGGAVAVRRTLATTICRITDPTLVARPRQLHD
Ga0318513_105318411	3300032065	Soil	VIASKGGASEPRDMLLPGKAGGTAAVRRTLVSTICRVADPTLVARP
Ga0318513_106353591	3300032065	Soil	VSVSKGGASETPDTLLLGKAGGAVAVRRTLASTICRVADPTQVPRPRQLRDASTV
Ga0318514_105656881	3300032066	Soil	MTAKGGASKPTDMLPPGSAGGAVAVRRTLASTICRIADPTQVPRPR
Ga0318524_101829271	3300032067	Soil	VITSKGGASEPSDTLLPGRAGGAVAVRRTLASTICRIADPTQEPR
Ga0307471_1034830992	3300032180	Hardwood Forest Soil	MIPSRGGASEPSDMRLPGKAGGTVAVRRTLACTICRVTADPTQ
Ga0335082_104560801	3300032782	Soil	VIPFTGGASEPSDTLFPGKAGGTVAVRRTLACTICRIIDPTQVPRPRQL
Ga0335079_107699071	3300032783	Soil	VIASQGGASEPPGTLLLGKAGGAAAVRRTLDTTICRIADPTLVARPRQLRDVST
Ga0310914_101659211	3300033289	Soil	MVASQGDAIESPNTLLPDKAGGAVAVRRTLATTICRITDPTLVARPRQL
Ga0310914_103186101	3300033289	Soil	VIASKGGASEPFDMLLPGKAGGAAAVRRTLETTICRISDPMLVARPRQLRDAT
Ga0318519_104364122	3300033290	Soil	VIASQGGASEPPDMLPPGKAGGAVAVRRTLATTICRVADPTQVPR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign