Metagenome Family F079277

Basic Information
Family ID	F079277
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	36 residues
Representative Sequence	VRIPRRLERFILGTMMSLVALVAERRVVKALGKKRR
Number of Associated Samples	93
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.79 %
% of genes near scaffold ends (potentially truncated)	12.07 %
% of genes from short scaffolds (< 2000 bps)	77.59 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (89.655 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (20.690 % of family members)
Environment Ontology (ENVO)	Unclassified (40.517 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.379 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.78% β-sheet: 0.00% Coil/Unstructured: 22.22%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02687	FtsX	27.59
PF00903	Glyoxalase	15.52
PF12704	MacB_PCD	10.34
PF12681	Glyoxalase_2	6.90
PF03109	ABC1	4.31
PF00582	Usp	3.45
PF09924	LPG_synthase_C	2.59
PF00211	Guanylate_cyc	1.72
PF07508	Recombinase	0.86
PF13374	TPR_10	0.86
PF13936	HTH_38	0.86
PF03259	Robl_LC7	0.86
PF01680	SOR_SNZ	0.86
PF00239	Resolvase	0.86
PF00392	GntR	0.86
PF13302	Acetyltransf_3	0.86
PF02801	Ketoacyl-synt_C	0.86
PF01636	APH	0.86
PF14492	EFG_III	0.86
PF13561	adh_short_C2	0.86
PF13191	AAA_16	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	4.31
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.72
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.72
COG0214	Pyridoxal 5'-phosphate synthase subunit PdxS	Coenzyme transport and metabolism [H]	0.86
COG2018	Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family	Signal transduction mechanisms [T]	0.86
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.66 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.66 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.66 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	74.14 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	72.41 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.79 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	18.97 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	37.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	16.38 %
Unclassified	root	N/A	10.34 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.93 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	10.34 %
Unclassified	root	N/A	10.34 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.72 %
Patulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.93 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	10.34 %
Unclassified	root	N/A	10.34 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.72 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.93 %
Unclassified	root	N/A	10.34 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	2.59 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.72 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.86 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.93 %
Unclassified	root	N/A	10.34 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1.72 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.72 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.86 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.86 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig513248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1108	Open in IMG/M
3300000953\|JGI11615J12901_11693281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300000956\|JGI10216J12902_101873376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2831	Open in IMG/M
3300001686\|C688J18823_10569800	All Organisms → cellular organisms → Bacteria → Terrabacteria group	724	Open in IMG/M
3300005518\|Ga0070699_101453866	Not Available	629	Open in IMG/M
3300005526\|Ga0073909_10069922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1323	Open in IMG/M
3300005553\|Ga0066695_10107592	Not Available	1713	Open in IMG/M
3300005556\|Ga0066707_10469375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300005558\|Ga0066698_10611698	Not Available	733	Open in IMG/M
3300005560\|Ga0066670_10008621	All Organisms → cellular organisms → Bacteria	4251	Open in IMG/M
3300005560\|Ga0066670_10320486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300005575\|Ga0066702_10488977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	750	Open in IMG/M
3300005587\|Ga0066654_10160696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1147	Open in IMG/M
3300005598\|Ga0066706_10041278	All Organisms → cellular organisms → Bacteria	3049	Open in IMG/M
3300005598\|Ga0066706_10051856	All Organisms → cellular organisms → Bacteria	2778	Open in IMG/M
3300005713\|Ga0066905_100005110	All Organisms → cellular organisms → Bacteria	5504	Open in IMG/M
3300005718\|Ga0068866_10417158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	870	Open in IMG/M
3300006031\|Ga0066651_10301831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	856	Open in IMG/M
3300006031\|Ga0066651_10331620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300006031\|Ga0066651_10643187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300006034\|Ga0066656_10025236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3241	Open in IMG/M
3300006046\|Ga0066652_100013914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5296	Open in IMG/M
3300006046\|Ga0066652_101034603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300006163\|Ga0070715_10115605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1272	Open in IMG/M
3300006175\|Ga0070712_100266205	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300006755\|Ga0079222_10152723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1315	Open in IMG/M
3300006794\|Ga0066658_10447902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300006797\|Ga0066659_11156889	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300006852\|Ga0075433_10256972	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300009012\|Ga0066710_100212367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2766	Open in IMG/M
3300009012\|Ga0066710_100442877	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300009090\|Ga0099827_11013898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300009098\|Ga0105245_10414953	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300009100\|Ga0075418_10075342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3591	Open in IMG/M
3300009137\|Ga0066709_100228271	All Organisms → cellular organisms → Bacteria	2472	Open in IMG/M
3300009137\|Ga0066709_100391510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1925	Open in IMG/M
3300009147\|Ga0114129_10343701	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300009792\|Ga0126374_10001728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6522	Open in IMG/M
3300010043\|Ga0126380_10176228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1403	Open in IMG/M
3300010044\|Ga0126310_10008975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4560	Open in IMG/M
3300010301\|Ga0134070_10063083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1259	Open in IMG/M
3300010303\|Ga0134082_10093321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1187	Open in IMG/M
3300010303\|Ga0134082_10249094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300010321\|Ga0134067_10493913	Not Available	506	Open in IMG/M
3300010326\|Ga0134065_10118421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	897	Open in IMG/M
3300010326\|Ga0134065_10274123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300010333\|Ga0134080_10185641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	895	Open in IMG/M
3300010333\|Ga0134080_10709248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300010335\|Ga0134063_10227957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300010360\|Ga0126372_11473631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300010371\|Ga0134125_10048912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4708	Open in IMG/M
3300010399\|Ga0134127_13279062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300010400\|Ga0134122_10091831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2391	Open in IMG/M
3300012199\|Ga0137383_10226424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1371	Open in IMG/M
3300012201\|Ga0137365_10055018	All Organisms → cellular organisms → Bacteria	3007	Open in IMG/M
3300012211\|Ga0137377_10124824	All Organisms → cellular organisms → Bacteria	2456	Open in IMG/M
3300012211\|Ga0137377_10364004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1383	Open in IMG/M
3300012211\|Ga0137377_11236619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	677	Open in IMG/M
3300012350\|Ga0137372_10075275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2892	Open in IMG/M
3300012350\|Ga0137372_10235944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1445	Open in IMG/M
3300012357\|Ga0137384_11393550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300012895\|Ga0157309_10345516	Not Available	516	Open in IMG/M
3300012915\|Ga0157302_10238648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300012944\|Ga0137410_10663233	Not Available	867	Open in IMG/M
3300012951\|Ga0164300_10170724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1039	Open in IMG/M
3300012951\|Ga0164300_10632658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300012955\|Ga0164298_10572066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	770	Open in IMG/M
3300012984\|Ga0164309_10029756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	2981	Open in IMG/M
3300014157\|Ga0134078_10016084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2283	Open in IMG/M
3300014166\|Ga0134079_10233158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300014488\|Ga0182001_10058475	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300014488\|Ga0182001_10199966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300015359\|Ga0134085_10178639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300017654\|Ga0134069_1302410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300018027\|Ga0184605_10018100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2794	Open in IMG/M
3300018027\|Ga0184605_10164297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1002	Open in IMG/M
3300018027\|Ga0184605_10197031	All Organisms → cellular organisms → Bacteria → Terrabacteria group	914	Open in IMG/M
3300018027\|Ga0184605_10399347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	614	Open in IMG/M
3300018027\|Ga0184605_10536367	Not Available	506	Open in IMG/M
3300018028\|Ga0184608_10096274	Not Available	1231	Open in IMG/M
3300018431\|Ga0066655_10660290	Not Available	707	Open in IMG/M
3300018431\|Ga0066655_10813786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300018433\|Ga0066667_10017179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3727	Open in IMG/M
3300018433\|Ga0066667_10541957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	964	Open in IMG/M
3300018482\|Ga0066669_11042448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300018482\|Ga0066669_11473546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	618	Open in IMG/M
3300019356\|Ga0173481_10385160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300019867\|Ga0193704_1036605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	983	Open in IMG/M
3300019877\|Ga0193722_1076465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300021445\|Ga0182009_10650958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300024288\|Ga0179589_10257487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300025899\|Ga0207642_10918829	Not Available	561	Open in IMG/M
3300025905\|Ga0207685_10102173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1228	Open in IMG/M
3300025910\|Ga0207684_10116720	Not Available	2287	Open in IMG/M
3300025910\|Ga0207684_10138207	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300025927\|Ga0207687_11334087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300025929\|Ga0207664_10985318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300026277\|Ga0209350_1024030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1863	Open in IMG/M
3300026312\|Ga0209153_1004697	All Organisms → cellular organisms → Bacteria	4280	Open in IMG/M
3300026330\|Ga0209473_1212434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	721	Open in IMG/M
3300026548\|Ga0209161_10070014	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300026550\|Ga0209474_10625524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300027727\|Ga0209328_10107658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300027821\|Ga0209811_10058751	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300028705\|Ga0307276_10179732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300028711\|Ga0307293_10156470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300028715\|Ga0307313_10198481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300028768\|Ga0307280_10386316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300028778\|Ga0307288_10428447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300028784\|Ga0307282_10145190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1122	Open in IMG/M
3300028807\|Ga0307305_10044414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2046	Open in IMG/M
3300028875\|Ga0307289_10478178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300028878\|Ga0307278_10426972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300030511\|Ga0268241_10032072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300031847\|Ga0310907_10645872	Not Available	581	Open in IMG/M
3300032159\|Ga0268251_10285285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.10%
Host-Associated	Host-Associated	6.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.93%
Plants	Host-Associated → Plants	6.90%
Aquatic	Environmental → Aquatic	5.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.93%
Sediment	Environmental → Aquatic → Sediment	5.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Phylloplane	Host-Associated → Plants → Phylloplane	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.31%
Loam	Environmental → Terrestrial → Soil → Loam	8.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.72%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.86%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079277

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_02575250	2124908045	Soil	VRIPRRLERFILGTMMSVVALVAERRVIKALGKKRP
JGI11615J12901_116932812	3300000953	Soil	VRIPRRLERFILGTMMSVVALVAERRVTKALGKKRP*
JGI10216J12902_1018733763	3300000956	Soil	MRIPRRLERFILGTMMSLVAIVAERRVVKTLGKKRR*
C688J18823_105698002	3300001686	Soil	VQIPRRLERFILGSMMSVVALLAERRVVKALGKKR*
Ga0070699_1014538661	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	ARPVRIPRRLERFILGTMMSLVALVAERRVVKALGKKRP*
Ga0073909_100699222	3300005526	Surface Soil	VRVPRRLERFILGTMMSLVALLGERRVVKALGKRR*
Ga0066695_101075922	3300005553	Soil	VRIPRRLERFILGTMMSVVALVAERRVVKALGKKRP*
Ga0066707_104693752	3300005556	Soil	VRIPRRLERFILGSMMTLVALVAERRVIKALGKKRR*
Ga0066698_106116982	3300005558	Soil	VRIPRRLERFILGTMMSLVALVAERRVVKALGKKRR*
Ga0066670_100086212	3300005560	Soil	MRIPRRLERFILGSMMSLVAIVAERRVVKALGSKKRR*
Ga0066670_103204861	3300005560	Soil	VRIPRRVERFILGSMMSLVALVAERRVVKALGKKRR*
Ga0066702_104889772	3300005575	Soil	MRIPRRLERLILGTMMSLVALVAERRVIKALGKKRP*
Ga0066654_101606962	3300005587	Soil	MRIPRRLERFILGSMMTLVALVAERRVIKALGKKRR*
Ga0066706_100412781	3300005598	Soil	RIPRRLERFILGSMMTLVALVAERRVIKALGKKRR*
Ga0066706_100518564	3300005598	Soil	RIPRRLERFILGTMMSLVALVAERRVVKALGKKRS*
Ga0066905_1000051104	3300005713	Tropical Forest Soil	MRIPRRLERFILGSMMSLVAIVAERRVVKTLGKKRR*
Ga0068866_104171582	3300005718	Miscanthus Rhizosphere	PVRIPRRLERFILGTMMSLVAIVAERRVVKALGKKRP*
Ga0066651_103018312	3300006031	Soil	VRIPRRLERFILGSMMSLVAIVAERRVVKALGAKKRK*
Ga0066651_103316201	3300006031	Soil	MRIPRRLERFILGSMMSLVAIVAERRVVKALGSKKR
Ga0066651_106431872	3300006031	Soil	MRIPRRLERLILGSMMSLVAIVAERRVVKALGKKRR*
Ga0066656_100252363	3300006034	Soil	MRIPRRLERFILGSMMTLVALVAERRVIKALGKNRR*
Ga0066652_1000139144	3300006046	Soil	MRIPRRLERFILGTMMSLVALVAERRVVKALGKKR*
Ga0066652_1010346032	3300006046	Soil	RIPRRLERFILGTMMSVVALVAERRVVKALGKKRP*
Ga0070715_101156052	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VRIPRRLERFILGSMMSLVALLAERRVVKALGKKR*
Ga0070712_1002662052	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VRIPRRLERFILGSMMSLVALVAERRVVKALGKKHR*
Ga0079222_101527231	3300006755	Agricultural Soil	MRIPRRLERFILGTMMSVVAIVAERRVVKKLGKKQ*
Ga0066658_104479021	3300006794	Soil	MRIPRRLERFILGTMMSLVALVAERRVVKALGKKRP*
Ga0066659_111568892	3300006797	Soil	VRIPRRLEHFILGTMMSLVALVAERRVVKALGKKRS*
Ga0075433_102569722	3300006852	Populus Rhizosphere	VRIPRRLERFILGTMMSLVAIVAERRVVKALGKKRP*
Ga0066710_1002123673	3300009012	Grasslands Soil	VRIPRRVERFILGSMMSLVALVAERRVVKALGKKRR
Ga0066710_1004428773	3300009012	Grasslands Soil	VRIPRRLERFVLGTMMSLVALVAERRVVKALGKQRR
Ga0099827_110138982	3300009090	Vadose Zone Soil	VQIPRRLERFILGTMMSLVALVAERRVVKALGKKRR*
Ga0105245_104149532	3300009098	Miscanthus Rhizosphere	VRIPRRLERFILGTMMTVVALVAERRVVKALGKKRP*
Ga0075418_100753423	3300009100	Populus Rhizosphere	LRIPRRLERFILGTMMSLVAIVAERRVVKALGAKKRR*
Ga0066709_1002282711	3300009137	Grasslands Soil	VRIPRRLERFILGTMMSLVALVAERRVVKALGKKRS*
Ga0066709_1003915103	3300009137	Grasslands Soil	VRIPRRLERFVLGTMMSLVALVAERRVVKALGKQRR*
Ga0114129_103437012	3300009147	Populus Rhizosphere	MRIPRRLERFILGTMMSLVAIVAERRVVKALGKKRP*
Ga0126374_100017282	3300009792	Tropical Forest Soil	MLIPRRLERFILGTMMSLVAIVAERRVVKALGKKRK*
Ga0126380_101762281	3300010043	Tropical Forest Soil	MLIPRRLERFILGSMMSLVAIVAERRVVKALGKKRK*
Ga0126310_100089752	3300010044	Serpentine Soil	MRIPRRLERFILGTMMTVVALVAERRVIKALGKKRS*
Ga0134070_100630833	3300010301	Grasslands Soil	VRIPRRLERFILGTMMSLVALVAERRVIKALGKKRP*
Ga0134082_100933212	3300010303	Grasslands Soil	MRIPRRLERFILGTMMSLVALVAERRVVKALGKKRR*
Ga0134082_102490942	3300010303	Grasslands Soil	VRIPRRLERFILGSMMTLVALVAERRVIKALGKNRR*
Ga0134067_104939131	3300010321	Grasslands Soil	VRIPRRLERFILGSMMSVVAIVAERRVVKALGAKKRK*
Ga0134065_101184212	3300010326	Grasslands Soil	VRIPRRLERFILGSMMSLVALLAERRVVKALGKRR*
Ga0134065_102741231	3300010326	Grasslands Soil	VRIPRRLERFILGSMMSLVAIVAERRVVKKLGAKKRK*
Ga0134080_101856412	3300010333	Grasslands Soil	MQIPRRLERFILGTMMSLVALVAERRVVKALGKKRS*
Ga0134080_107092482	3300010333	Grasslands Soil	TLEPVRIPRRLERFILGTMMSVVALVAERRVVKALGKKRP*
Ga0134063_102279571	3300010335	Grasslands Soil	VRIPRRLERLILGTMMSVVALVAERRVVKALGKKRP*
Ga0126372_114736311	3300010360	Tropical Forest Soil	MRIPRRLERFILGTMMSLVAIVAERRVVKALGKKRR*
Ga0134125_100489123	3300010371	Terrestrial Soil	VRVPRRLERFILGTMMSLVALLAERRVVKALGKRR*
Ga0134127_132790622	3300010399	Terrestrial Soil	VRIPRRLERFILGTMMSVVALVAERRVVKALVKKRP*
Ga0134122_100918311	3300010400	Terrestrial Soil	MRIPRRLERFILGTMMSLVAIVAERRVVKALGKKRG*
Ga0137383_102264241	3300012199	Vadose Zone Soil	VRIPRRLERFILGSMMSLVALVAERRVVKALGKKRP*
Ga0137365_100550182	3300012201	Vadose Zone Soil	VRIPRRLERFILGTMMSVVALVAERRVIKALGKKRP*
Ga0137377_101248242	3300012211	Vadose Zone Soil	VRIPRRLERFILGSMMSLVALLAERRVVKALGKKRP*
Ga0137377_103640042	3300012211	Vadose Zone Soil	VRIPRRLEHFILGTMMSLVALVAERRVVKALGKKRG*
Ga0137377_112366192	3300012211	Vadose Zone Soil	VRIPRRLERFILGTMMSVVALVAERRVVKTLGKKRP*
Ga0137372_100752751	3300012350	Vadose Zone Soil	VRIPRRLERFVLGTMMSLVALVAERRVVKALGKKRR*
Ga0137372_102359442	3300012350	Vadose Zone Soil	MPRRLERFILGTMMSLVAIVAERRVVKALGKKRP*
Ga0137384_113935501	3300012357	Vadose Zone Soil	VRIPRRLERFILGTMMSLVALVAERQVVKALGKKRR*
Ga0157309_103455162	3300012895	Soil	VRIPRRLERFILGTMMSVVAIVAERRVVKKLGKKR*
Ga0157302_102386482	3300012915	Soil	MRIPRRLERFILGTMMSVVAIVAERRVVKKLGKKR*
Ga0137410_106632331	3300012944	Vadose Zone Soil	ARPVRIPRRLERFILGSMMSLVALVAERRVVKALGKKRP*
Ga0164300_101707242	3300012951	Soil	VRIPRRLERVILGSMMSLVALLAERRVVKALGKKR*
Ga0164300_106326581	3300012951	Soil	VRIPRRLERFILGTMMSVVALVAERRVVKALGKKRR*
Ga0164298_105720662	3300012955	Soil	MRIPRRLERFILGSMMSLVALLAERRVVKALGKKR*
Ga0164309_100297562	3300012984	Soil	VRIPRRLERFILGTMMSLVALLAERRVVKALGKRR*
Ga0134078_100160842	3300014157	Grasslands Soil	MRIPRRLERFILGSMMSLVAIVAERRVVKKLGAKKRK*
Ga0134079_102331582	3300014166	Grasslands Soil	VRIPRRLERLVLGSMMSLVAMIAERRVVKALGKKR*
Ga0182001_100584752	3300014488	Soil	MRLPRRLERLILGTMMSIVALVAERRVVKALAKRR*
Ga0182001_101999662	3300014488	Soil	VRIPRRLERLLLGSMMSLVALLAERRVVKALGKKR*
Ga0134085_101786392	3300015359	Grasslands Soil	VRIPRRLERFILGTMMSVVALVAERRVVKALGKKRT*
Ga0134069_13024102	3300017654	Grasslands Soil	MRIPRRLERFILGTMMSVVALVAERRVIKALGKKRR
Ga0184605_100181002	3300018027	Groundwater Sediment	MRIPRRLERFVLGTMMSLVALVAERRVVKALGKKRR
Ga0184605_101642972	3300018027	Groundwater Sediment	VRIPRRLERFILGTMMSVVALVAERRVVKALGKKRP
Ga0184605_101970312	3300018027	Groundwater Sediment	VRIPRRLERALLGFLMTLVALVAERRVVKALGKRR
Ga0184605_103993472	3300018027	Groundwater Sediment	MRVPRRLERLILGSMMSLVALVAERRVIKALGKKRH
Ga0184605_105363672	3300018027	Groundwater Sediment	VRIPRRLERALLGFLMSLVALVAERRVVKALGKRR
Ga0184608_100962742	3300018028	Groundwater Sediment	VRIPRRLERFILGTMMSVVALLAERRVIKALGKKRP
Ga0066655_106602902	3300018431	Grasslands Soil	MRIPRRLERFILGTMMSLVALVAERRVVKALGKKRR
Ga0066655_108137862	3300018431	Grasslands Soil	VRIPRRLERFILGSMMTLVALVAERRVIKALGEKRR
Ga0066667_100171793	3300018433	Grasslands Soil	VRIPRRLERFILGSMMTLVALVAERRVIKALGKKRR
Ga0066667_105419572	3300018433	Grasslands Soil	MRIPRRLERFILGSMMTLVALVAERRVIKALGKNRR
Ga0066669_110424482	3300018482	Grasslands Soil	VRIPRRLERFILGSMMSVVAIVAERRVVKALGAKKRK
Ga0066669_114735462	3300018482	Grasslands Soil	MRIPRRLERFILGSMMSLVAIVAERRVVKALGSKKRR
Ga0173481_103851602	3300019356	Soil	VRIPRRLERFILGTMMSLVAIVAERRVVKALGKKRP
Ga0193704_10366052	3300019867	Soil	VQIPRRLERFILGTMMSLVALVAERRVVKALGKKRP
Ga0193722_10764652	3300019877	Soil	VRIPRRLERFILGTMMSLVALVAERRVVKALGKKRP
Ga0182009_106509582	3300021445	Soil	MRIPRRLERFILGTMMSLVAMVAERRVVKALGAKKRR
Ga0179589_102574872	3300024288	Vadose Zone Soil	VRIPRRLERFILGSMMSLVALVAERRVVKALGKKRP
Ga0207642_109188292	3300025899	Miscanthus Rhizosphere	VRVPRRLERFILGTMMSLVAVLAERRVVKALGKRR
Ga0207685_101021731	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	YAPPVRIPRRLERFILGTMMSLVAIVAERRVVKALGKKRP
Ga0207684_101167202	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VRIPRRLERFILGSMMSLVALLAERRVVKALGKKRP
Ga0207684_101382073	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VRIPRRLERFILGTMMSLVALVAERRVLRALSKKSR
Ga0207687_113340871	3300025927	Miscanthus Rhizosphere	VRIPRRLERFILGTMMTVVALVAERRVVKALGKKRP
Ga0207664_109853181	3300025929	Agricultural Soil	VRIPRRLERFILGTMMSLVAIVAERRVVKALGKKRG
Ga0209350_10240301	3300026277	Grasslands Soil	VRIPRRLERFILGTMMSMVALVAERRVVKALGKKRP
Ga0209153_10046972	3300026312	Soil	MQIPRRLERFILGTMMSLVALVAERRVVKALGKKRP
Ga0209473_12124342	3300026330	Soil	MRIPRRLERFILGSMMSVVAIVAERRVVKALGAKKRK
Ga0209161_100700141	3300026548	Soil	VRIPRRLERFILGTMMSLVALVAERRVVKALGKKRS
Ga0209474_106255241	3300026550	Soil	MRIPRRLERFILGSMMSLVAIVAERRVVKALGAKKRK
Ga0209328_101076582	3300027727	Forest Soil	MRIPPRLERLLLGSMMSLVALLAERRVVKVLGKKR
Ga0209811_100587514	3300027821	Surface Soil	VRVPRRLERFILGTMMSLVALLGERRVVKALGKRR
Ga0307276_101797322	3300028705	Soil	VRIPRRLERFVLGTMMSLVALVAERRVVKALGKKRR
Ga0307293_101564702	3300028711	Soil	VQIPRRLERFILGTMMSVVALLAERRVIKALGKKRP
Ga0307313_101984812	3300028715	Soil	VQIPRRLERFILGTMMSVVALLAERRVIKALGKKRQ
Ga0307280_103863161	3300028768	Soil	VRIPRRLERFILGTMMSLVALVAERRVVKALGKNRP
Ga0307288_104284472	3300028778	Soil	EPVTLEPVRIPRRLERFILGTMMSVVALVAERRVVKALGKKRP
Ga0307282_101451902	3300028784	Soil	VRIPRRLERFVLGTMMTLVALVAERRVVKALGKKRR
Ga0307305_100444141	3300028807	Soil	PVTLEPVQIPRRLERFILGTMMSVVALLAERRVIKALGKKRQ
Ga0307289_104781782	3300028875	Soil	PVTLEPVQIPRRLERFILGTMMSVVALLAERRVIKALGKKRP
Ga0307278_104269721	3300028878	Soil	MRIPRRLERFILGTMMTLVALVAERRVIKALGKKRS
Ga0268241_100320722	3300030511	Soil	MLIPRRLERFILGSMMSLVAIVAERRVVKALGKKRR
Ga0310907_106458722	3300031847	Soil	YAPPVRIPRRLERFILGTMMSLVAIAAERRVVKALGKKRP
Ga0268251_102852852	3300032159	Agave	VRIPRRLERLLLGSMMSLVALIAERRVVKALGKKR

Hidden Markov Model


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