Metagenome / Metatranscriptome Family F079267

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079267
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	78 residues
Representative Sequence	MSEQSNQTRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Number of Associated Samples	107
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.69 %
% of genes near scaffold ends (potentially truncated)	44.83 %
% of genes from short scaffolds (< 2000 bps)	87.93 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.931 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.828 % of family members)
Environment Ontology (ENVO)	Unclassified (35.345 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.724 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.64% β-sheet: 25.64% Coil/Unstructured: 48.72%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF03401	TctC	69.83
PF12832	MFS_1_like	1.72
PF00768	Peptidase_S11	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	69.83
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.93 %
Unclassified	root	N/A	37.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.93 %
Unclassified	root	N/A	37.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.93 %
Unclassified	root	N/A	37.07 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.03 %
Unclassified	root	N/A	37.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	9.48 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28.45 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8.62 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	15.52 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	11.21 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	15.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.21 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	15.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.21 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	15.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.21 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_2899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	838	Open in IMG/M
3300001686\|C688J18823_10141120	All Organisms → cellular organisms → Bacteria → Proteobacteria	1657	Open in IMG/M
3300001991\|JGI24743J22301_10003719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2434	Open in IMG/M
3300002568\|C688J35102_117856538	Not Available	511	Open in IMG/M
3300004153\|Ga0063455_100697249	Not Available	683	Open in IMG/M
3300004157\|Ga0062590_101071383	Not Available	774	Open in IMG/M
3300004479\|Ga0062595_100278182	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300005093\|Ga0062594_101844582	Not Available	639	Open in IMG/M
3300005160\|Ga0066820_1011573	Not Available	600	Open in IMG/M
3300005163\|Ga0066823_10008373	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300005165\|Ga0066869_10000819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3283	Open in IMG/M
3300005168\|Ga0066809_10024057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1251	Open in IMG/M
3300005327\|Ga0070658_10754743	Not Available	845	Open in IMG/M
3300005328\|Ga0070676_10124556	All Organisms → cellular organisms → Bacteria → Proteobacteria	1622	Open in IMG/M
3300005330\|Ga0070690_100356082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1064	Open in IMG/M
3300005336\|Ga0070680_101016620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	716	Open in IMG/M
3300005337\|Ga0070682_100654693	Not Available	837	Open in IMG/M
3300005340\|Ga0070689_100093246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2376	Open in IMG/M
3300005341\|Ga0070691_10292168	Not Available	888	Open in IMG/M
3300005343\|Ga0070687_101374087	Not Available	527	Open in IMG/M
3300005366\|Ga0070659_100255623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1452	Open in IMG/M
3300005434\|Ga0070709_10825390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	729	Open in IMG/M
3300005438\|Ga0070701_10066455	All Organisms → cellular organisms → Bacteria → Proteobacteria	1916	Open in IMG/M
3300005439\|Ga0070711_100483145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1019	Open in IMG/M
3300005441\|Ga0070700_100001943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10475	Open in IMG/M
3300005456\|Ga0070678_100346237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1276	Open in IMG/M
3300005466\|Ga0070685_10090219	All Organisms → cellular organisms → Bacteria → Proteobacteria	1854	Open in IMG/M
3300005518\|Ga0070699_101287805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	670	Open in IMG/M
3300005544\|Ga0070686_100188522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1470	Open in IMG/M
3300005549\|Ga0070704_100275922	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300005563\|Ga0068855_101029275	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005615\|Ga0070702_100250327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1201	Open in IMG/M
3300005615\|Ga0070702_101294995	Not Available	591	Open in IMG/M
3300005719\|Ga0068861_101115727	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300005719\|Ga0068861_101318261	Not Available	702	Open in IMG/M
3300005834\|Ga0068851_10521860	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	715	Open in IMG/M
3300005841\|Ga0068863_101867245	Not Available	611	Open in IMG/M
3300006038\|Ga0075365_10430771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	931	Open in IMG/M
3300006038\|Ga0075365_10603532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300006042\|Ga0075368_10071157	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300006046\|Ga0066652_101387833	Not Available	658	Open in IMG/M
3300006048\|Ga0075363_100385791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	822	Open in IMG/M
3300006163\|Ga0070715_10315184	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300006581\|Ga0074048_10068272	All Organisms → cellular organisms → Bacteria → Proteobacteria	2139	Open in IMG/M
3300006605\|Ga0074057_12262014	All Organisms → cellular organisms → Bacteria → Proteobacteria	2234	Open in IMG/M
3300006854\|Ga0075425_100773367	Not Available	1101	Open in IMG/M
3300006881\|Ga0068865_101594088	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300006953\|Ga0074063_10018925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	746	Open in IMG/M
3300009148\|Ga0105243_10006602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8959	Open in IMG/M
3300009148\|Ga0105243_12804360	Not Available	528	Open in IMG/M
3300010036\|Ga0126305_10319859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1011	Open in IMG/M
3300010045\|Ga0126311_10347232	All Organisms → cellular organisms → Bacteria → Proteobacteria	1130	Open in IMG/M
3300010396\|Ga0134126_11885717	Not Available	654	Open in IMG/M
3300010400\|Ga0134122_12851333	Not Available	537	Open in IMG/M
3300011332\|Ga0126317_10696126	Not Available	528	Open in IMG/M
3300012212\|Ga0150985_107212467	Not Available	523	Open in IMG/M
3300012212\|Ga0150985_112643332	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300012469\|Ga0150984_115087111	Not Available	618	Open in IMG/M
3300012908\|Ga0157286_10189911	Not Available	685	Open in IMG/M
3300012913\|Ga0157298_10308164	Not Available	564	Open in IMG/M
3300012944\|Ga0137410_11814999	Not Available	539	Open in IMG/M
3300012955\|Ga0164298_10190937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1189	Open in IMG/M
3300012961\|Ga0164302_10417251	Not Available	921	Open in IMG/M
3300012988\|Ga0164306_10041446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2725	Open in IMG/M
3300013306\|Ga0163162_10282376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1792	Open in IMG/M
3300013308\|Ga0157375_10957822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	997	Open in IMG/M
3300018067\|Ga0184611_1291112	Not Available	569	Open in IMG/M
3300018073\|Ga0184624_10110557	Not Available	1183	Open in IMG/M
3300018073\|Ga0184624_10119501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1140	Open in IMG/M
3300018082\|Ga0184639_10118802	All Organisms → cellular organisms → Bacteria → Proteobacteria	1400	Open in IMG/M
3300018429\|Ga0190272_10132677	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300018465\|Ga0190269_10304138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	932	Open in IMG/M
3300018466\|Ga0190268_10842690	Not Available	702	Open in IMG/M
3300021082\|Ga0210380_10152120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1038	Open in IMG/M
3300022756\|Ga0222622_11002023	Not Available	614	Open in IMG/M
3300025900\|Ga0207710_10244606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	896	Open in IMG/M
3300025900\|Ga0207710_10535012	Not Available	610	Open in IMG/M
3300025905\|Ga0207685_10316351	Not Available	777	Open in IMG/M
3300025908\|Ga0207643_10002737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9543	Open in IMG/M
3300025911\|Ga0207654_10933175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	630	Open in IMG/M
3300025917\|Ga0207660_10882124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	730	Open in IMG/M
3300025926\|Ga0207659_10724140	Not Available	852	Open in IMG/M
3300025927\|Ga0207687_10035048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3412	Open in IMG/M
3300025934\|Ga0207686_11081659	Not Available	653	Open in IMG/M
3300025938\|Ga0207704_10031538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2988	Open in IMG/M
3300025938\|Ga0207704_10357960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1138	Open in IMG/M
3300026041\|Ga0207639_10058514	All Organisms → cellular organisms → Bacteria → Proteobacteria	2965	Open in IMG/M
3300026078\|Ga0207702_10777169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	946	Open in IMG/M
3300027560\|Ga0207981_1024377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1095	Open in IMG/M
3300027866\|Ga0209813_10107227	Not Available	958	Open in IMG/M
3300028379\|Ga0268266_10361906	All Organisms → cellular organisms → Bacteria → Proteobacteria	1365	Open in IMG/M
3300028381\|Ga0268264_10037887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3977	Open in IMG/M
3300028597\|Ga0247820_10129316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1560	Open in IMG/M
3300028608\|Ga0247819_10238631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	994	Open in IMG/M
3300028708\|Ga0307295_10133194	Not Available	684	Open in IMG/M
3300028710\|Ga0307322_10137716	Not Available	645	Open in IMG/M
3300028712\|Ga0307285_10238662	Not Available	515	Open in IMG/M
3300028720\|Ga0307317_10031842	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300028755\|Ga0307316_10371770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	527	Open in IMG/M
3300028778\|Ga0307288_10055430	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300028784\|Ga0307282_10478052	Not Available	605	Open in IMG/M
3300028793\|Ga0307299_10164911	Not Available	834	Open in IMG/M
3300028810\|Ga0307294_10184799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	712	Open in IMG/M
3300028810\|Ga0307294_10257429	Not Available	621	Open in IMG/M
3300028875\|Ga0307289_10206669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	808	Open in IMG/M
3300028885\|Ga0307304_10115347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1089	Open in IMG/M
3300030902\|Ga0308202_1153117	Not Available	514	Open in IMG/M
3300030905\|Ga0308200_1131867	Not Available	562	Open in IMG/M
3300031058\|Ga0308189_10478051	Not Available	533	Open in IMG/M
3300031547\|Ga0310887_10676225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	639	Open in IMG/M
3300031562\|Ga0310886_10519532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	721	Open in IMG/M
3300031854\|Ga0310904_10125973	All Organisms → cellular organisms → Bacteria → Proteobacteria	1452	Open in IMG/M
3300031892\|Ga0310893_10421853	Not Available	588	Open in IMG/M
3300031940\|Ga0310901_10117402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	983	Open in IMG/M
3300032000\|Ga0310903_10619822	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300032013\|Ga0310906_10007393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3984	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.10%
Host-Associated	Host-Associated	31.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.07%
Plants	Host-Associated → Plants	31.90%
Aquatic	Environmental → Aquatic	6.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.93%
Sediment	Environmental → Aquatic → Sediment	4.31%
Roots	Host-Associated → Plants → Roots	4.31%
Freshwater	Environmental → Aquatic → Freshwater	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.10%
Loam	Environmental → Terrestrial → Soil → Loam	18.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.31%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.86%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.07%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	4.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.31%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	4.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00093700	2199352025	Soil	MSEQSNQTRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
C688J18823_101411204	3300001686	Soil	MSEQSNQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTDDAEAITEAAVRREYVKLMSAA*
JGI24743J22301_100037193	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAIT
C688J35102_1178565382	3300002568	Soil	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Ga0063455_1006972491	3300004153	Soil	MSEQSNQDCCDFCQSGHVIRYFRQIAFRQQTDMGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA*
Ga0062590_1010713831	3300004157	Soil	MSEQSDQHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEEAEAIIEAAVRREYVKLVSRSLALV*
Ga0062595_1002781821	3300004479	Soil	ERSRRLTSNLERPMSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0062594_1018445821	3300005093	Soil	MSDQSNQHDCDFCQSGHVTQYVRQIAFRQQTDKGYVFCSVTIPLGVCDRCGSEHWTEDAEAITEA
Ga0066820_10115731	3300005160	Soil	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0066823_100083731	3300005163	Soil	QTRCDFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0066869_100008194	3300005165	Soil	MSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0066809_100240571	3300005168	Soil	MSEQSNQHRCDFCPSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKIRSAA*
Ga0070658_107547432	3300005327	Corn Rhizosphere	MSEQSDQHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070676_101245561	3300005328	Miscanthus Rhizosphere	PMSEQSDQTRCDFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070690_1003560822	3300005330	Switchgrass Rhizosphere	MSEQSNQHRCDFCPSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070680_1010166201	3300005336	Corn Rhizosphere	LERPMSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070682_1006546931	3300005337	Corn Rhizosphere	LERPMSEQSDQHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070689_1000932463	3300005340	Switchgrass Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDA
Ga0070691_102921681	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM*
Ga0070687_1013740871	3300005343	Switchgrass Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAA
Ga0070659_1002556232	3300005366	Corn Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070709_108253901	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	DAERSRRLTSNLERPKSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYASCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070701_100664551	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	CQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070711_1004831452	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKIRSAA*
Ga0070700_10000194313	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	DVLTGDQWASGHADAERSRRLTSNLERPMSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070678_1003462372	3300005456	Miscanthus Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMFAA*
Ga0070685_100902193	3300005466	Switchgrass Rhizosphere	MSEQSNQDRCDFCQSSHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070699_1012878052	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	TRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0070686_1001885222	3300005544	Switchgrass Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLLSAA*
Ga0070704_1002759222	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	QSNQDCCDFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0068855_1010292752	3300005563	Corn Rhizosphere	MSEQSNQHRCDFCPSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAA
Ga0070702_1002503271	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSDQSNQHDCDFCQSGHVTQYVRQIAFRQQTDKGYVSCSVTIPLGVCDRCGSEHWTEDAEAITEAA
Ga0070702_1012949951	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	DAERSRRLTSNLERPMSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0068861_1011157272	3300005719	Switchgrass Rhizosphere	MSDQSNQHDCDFCQSGHVTQYVRQIAFRQQTDKGYVFCSVTIPLGVCDRCGSEHWTEDAEAITEAAVRREYVKLLSAA*
Ga0068861_1013182611	3300005719	Switchgrass Rhizosphere	MSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITE
Ga0068851_105218601	3300005834	Corn Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVR
Ga0068863_1018672451	3300005841	Switchgrass Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYV
Ga0075365_104307712	3300006038	Populus Endosphere	MSEQSDQHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCTVTIPLGVCDHCGSKHWTEEAEAIIEAAVRREYVKLVSRSLALV*
Ga0075365_106035321	3300006038	Populus Endosphere	MLDTNPQHCDFCKHGRVLCHDQRIEFRQRTDLGYVSCCVTIPLGVCDRCGSSHWNEEAEAIIEGAVQREYKNLLSAV*
Ga0075368_100711571	3300006042	Populus Endosphere	QHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCTVTIPLGVCDHCGSKHWTEEAEAIIEAAVRREYVKLVSRSLALV*
Ga0066652_1013878331	3300006046	Soil	MCEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0075363_1003857912	3300006048	Populus Endosphere	MSEQSDQHRCDFCQSGHVTPYFRRIAFRQRTDKGYVSCTVTIPLGVCDHCGSKHWTEEAEAIIEAAVRREYVKLVSRSLALV*
Ga0070715_103151842	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQSDQHRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0074048_100682722	3300006581	Soil	MSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM*
Ga0074057_122620141	3300006605	Soil	GHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0075425_1007733672	3300006854	Populus Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREDVKLMSAA*
Ga0068865_1015940881	3300006881	Miscanthus Rhizosphere	ATGDQWASGRADAERGRRLTANLERPMSDQSNQHDCDFCQSGHVTQYVRQIAFRQQTDKGYVFCSVTIPLGVCDRCGSEHWTEDAKAITEAAVRREYVKLLSAA*
Ga0074063_100189252	3300006953	Soil	MSEQSNQDCCDFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0105243_100066027	3300009148	Miscanthus Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKLWTEDAEAITEAAVRREYVKLMSAA*
Ga0105243_128043601	3300009148	Miscanthus Rhizosphere	MSEQSDQHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHLTEEAEAIIEAAVRREYVKLVSRSLALV*
Ga0126305_103198592	3300010036	Serpentine Soil	MSEQSNQDCCDFCQSGHVIRYFRQIAFRQQTDKGYVSCNVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA*
Ga0126311_103472322	3300010045	Serpentine Soil	MSEQSYQDCCDFCQSGHVIRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA*
Ga0134126_118857172	3300010396	Terrestrial Soil	MSEQSDQHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEEAEAIIEAAVRREYVKLVSRSLTLVSSGRVDTFAPDP*
Ga0134122_128513332	3300010400	Terrestrial Soil	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEA
Ga0126317_106961261	3300011332	Soil	ERSRRLTSNFERPMSQQSEQTRCDFCHSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0150985_1072124671	3300012212	Avena Fatua Rhizosphere	MSEQSNQDCCDFCQSGHVIRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA*
Ga0150985_1126433322	3300012212	Avena Fatua Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM*
Ga0150984_1150871111	3300012469	Avena Fatua Rhizosphere	MSDQSNQHDCDFCQSGHVTRYVRQVAFRQQTDKGYVSCSVTIPLGVCDRCGSEHWTEDAEAITEAAVRREYVKLLSAA*
Ga0157286_101899111	3300012908	Soil	MSEQSDQHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCTVTIPLGVCDHCGSKHWTEEAEAIIEAAVRREYVKL
Ga0157298_103081641	3300012913	Soil	MSEQSNQDCCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLLSAA*
Ga0137410_118149991	3300012944	Vadose Zone Soil	MSEQSNQDRCDFCQSGHVTRYFRRIAFRQQTDKGYVSCSVTIPLAVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0164298_101909372	3300012955	Soil	MSGQSNQDRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0164302_104172512	3300012961	Soil	MSEQSNQHRCDFCPSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDADAITEAAVRREYVKLMSAA*
Ga0164306_100414461	3300012988	Soil	SDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0163162_102823762	3300013306	Switchgrass Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRPQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0157375_109578222	3300013308	Miscanthus Rhizosphere	MSEQSNQHRCDFCPSGHVTRYFRQIAFRQRTDEGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA*
Ga0184611_12911122	3300018067	Groundwater Sediment	MSEQSNQDCCNFCQSGHVTRYFRRIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAA
Ga0184624_101105571	3300018073	Groundwater Sediment	MSEQSNQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM
Ga0184624_101195012	3300018073	Groundwater Sediment	MSEQSNQDCCDFCQSGHVIRYFRQIAFRQQTDKGYVSCNVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYAKL
Ga0184639_101188022	3300018082	Groundwater Sediment	MSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM
Ga0190272_101326772	3300018429	Soil	MSEQSDQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Ga0190269_103041382	3300018465	Soil	MSEQSNQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA
Ga0190268_108426902	3300018466	Soil	MSEQSDQHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM
Ga0210380_101521202	3300021082	Groundwater Sediment	MSEQSNQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTDDAEAITEAAVRREYVKLMSAA
Ga0222622_110020232	3300022756	Groundwater Sediment	HDVLTGDLWASGHADAERSRRLTSNLERPMSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM
Ga0207710_102446062	3300025900	Switchgrass Rhizosphere	MSEQSNQHRCDFCPSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Ga0207710_105350122	3300025900	Switchgrass Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREY
Ga0207685_103163512	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQSDQHRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Ga0207643_100027376	3300025908	Miscanthus Rhizosphere	MSEQSNQHRCDFCPSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Ga0207654_109331752	3300025911	Corn Rhizosphere	QSNQHRCDFCPSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Ga0207660_108821242	3300025917	Corn Rhizosphere	LTANLERPMSDQSNQHDCDFCQSGHVTQYVRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Ga0207659_107241402	3300025926	Miscanthus Rhizosphere	MSEQSNQHRCDFCPSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREY
Ga0207687_100350483	3300025927	Miscanthus Rhizosphere	MSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Ga0207686_110816591	3300025934	Miscanthus Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMS
Ga0207704_100315381	3300025938	Miscanthus Rhizosphere	MSEQSNQDCCDFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Ga0207704_103579601	3300025938	Miscanthus Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVK
Ga0207639_100585143	3300026041	Corn Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM
Ga0207702_107771691	3300026078	Corn Rhizosphere	NGVLTGDQWTSGHADAERSRRLTSNLERLMSEQSNQHRCDFCPSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLMSAA
Ga0207981_10243772	3300027560	Soil	MSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKLM
Ga0209813_101072272	3300027866	Populus Endosphere	MSEQSDQHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEEAEAIIEAAVRREYVKLVSRSLALV
Ga0268266_103619062	3300028379	Switchgrass Rhizosphere	MSEQSDQHRCDFCQSGHVTRYFRRIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHLTEEAEAIIEAAVRREYVKLVSRSLALV
Ga0268264_100378872	3300028381	Switchgrass Rhizosphere	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYVKIRSAA
Ga0247820_101293161	3300028597	Soil	MSEQSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREM
Ga0247819_102386312	3300028608	Soil	MSEQSNQHRCDFCPSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREM
Ga0307295_101331941	3300028708	Soil	MSEQSNQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGLCDHCGSKHWTDDAEAITEAAVRREYVKLVSAA
Ga0307322_101377161	3300028710	Soil	WTSRHADAERSRRLTSNLERPMSEQSYQDCCDFCQSGHVIRYFRQIAFRQQTDKGYVSCNVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA
Ga0307285_102386622	3300028712	Soil	HGDAERSRRLTSNLERPMSEQSNQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTDDAEAITEAAVRREYVKLMSAA
Ga0307317_100318421	3300028720	Soil	SRRLTSNLERPMSEQSNQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTDDAEAITEAAVRREYVKLMSAA
Ga0307316_103717701	3300028755	Soil	RPMSEQSNQHRSDFCQSGHVSRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTDDAEAITEAAVRREYVKLMSAA
Ga0307288_100554301	3300028778	Soil	SNLERPMSEQSNQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTDDAEAITEAAVRREYVKLMSAA
Ga0307282_104780521	3300028784	Soil	MSEQSDQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCGVTIPLGVCDHCGSKHWAEDAEAITEAAVRREYVKLMSAA
Ga0307299_101649112	3300028793	Soil	MSEQSNQHRCDFCQSGHVTRYFRRIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTDDAEAITEAAVRREYVKLMSAA
Ga0307294_101847991	3300028810	Soil	RLTSNLERPMSEQSNQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTDDAEAITEAAVRREYVKLMSAA
Ga0307294_102574291	3300028810	Soil	LTSNLERPMSEQSNQDCCDFCQSGHVIRYFRQIAFRQQTDKGYVSCNVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA
Ga0307289_102066691	3300028875	Soil	MSEQSNQDCCDFCQSGHVIRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA
Ga0307304_101153471	3300028885	Soil	MSEQSNQHRCDFCQSGHVTRYFRQIAFRQQTDKGYVSCGVTIPLGVCDHCGSKHWAEDAEAITEAAVRREYVKLMSAA
Ga0308202_11531171	3300030902	Soil	GDQWTSRHADAERSRRLTSNLERPMSEQSNQDCCDFCQSGHVIRYFRQIAFRQQTDKGYVSCSVTIPLGDCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA
Ga0308200_11318672	3300030905	Soil	MSEQSNQDCCDFCQSGHVIRYFRQIAFRQQTDKGYVSCSVTIPLGDCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA
Ga0308189_104780511	3300031058	Soil	GDQWTSRHADAERSRRLTSNLERPMSEQSNQDCCDFCQSGHVIRYFRQIAFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREYAKLMSAA
Ga0310887_106762251	3300031547	Soil	SRRLTSNLERPMSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREM
Ga0310886_105195322	3300031562	Soil	MSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM
Ga0310904_101259732	3300031854	Soil	MSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREM
Ga0310893_104218531	3300031892	Soil	MSEQSDQTRCDFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM
Ga0310901_101174021	3300031940	Soil	ERPMSEQSNQDCCNFCQSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM
Ga0310903_106198221	3300032000	Soil	QSDQTRCDFCQSGHVTRYFRQIPFRQQTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEAITEAAVRREM
Ga0310906_100073934	3300032013	Soil	MSEQSNQHRCDFCPSGHVTRYFRQIAFRQRTDKGYVSCSVTIPLGVCDHCGSKHWTEDAEATTEAAVRREM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079267

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences