Metagenome / Metatranscriptome Family F079265

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079265
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	80 residues
Representative Sequence	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAENPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Number of Associated Samples	80
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.76 %
% of genes near scaffold ends (potentially truncated)	35.34 %
% of genes from short scaffolds (< 2000 bps)	94.83 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.103 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.897 % of family members)
Environment Ontology (ENVO)	Unclassified (37.069 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.793 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.48% β-sheet: 12.15% Coil/Unstructured: 80.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00072	Response_reg	6.03
PF00582	Usp	4.31
PF00496	SBP_bac_5	1.72
PF00106	adh_short	0.86
PF13545	HTH_Crp_2	0.86
PF03729	DUF308	0.86
PF00501	AMP-binding	0.86
PF13561	adh_short_C2	0.86
PF14294	DUF4372	0.86
PF05199	GMC_oxred_C	0.86
PF07690	MFS_1	0.86
PF00132	Hexapep	0.86
PF04828	GFA	0.86
PF00691	OmpA	0.86
PF13649	Methyltransf_25	0.86
PF07769	PsiF_repeat	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.86
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.86
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	76.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	76.72 %
Unclassified	root	N/A	6.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	76.72 %
Unclassified	root	N/A	6.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100321953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300003505\|JGIcombinedJ51221_10096695	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300003505\|JGIcombinedJ51221_10471323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300004080\|Ga0062385_10514596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300004082\|Ga0062384_100478064	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300004092\|Ga0062389_101919823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300005435\|Ga0070714_100440747	All Organisms → cellular organisms → Bacteria → Proteobacteria	1236	Open in IMG/M
3300005435\|Ga0070714_100930262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300005436\|Ga0070713_100437527	Not Available	1226	Open in IMG/M
3300005436\|Ga0070713_100955387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300005436\|Ga0070713_101202588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300005436\|Ga0070713_101557225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300005437\|Ga0070710_10151302	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300005437\|Ga0070710_10464255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300005439\|Ga0070711_100155141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1730	Open in IMG/M
3300005439\|Ga0070711_101074831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300005439\|Ga0070711_101225719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300005445\|Ga0070708_100428026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1248	Open in IMG/M
3300005602\|Ga0070762_10899323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300005610\|Ga0070763_10740277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300005921\|Ga0070766_10200905	All Organisms → cellular organisms → Bacteria → Proteobacteria	1246	Open in IMG/M
3300006163\|Ga0070715_10344811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300006172\|Ga0075018_10182711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300006172\|Ga0075018_10680860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300006174\|Ga0075014_100263999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300006175\|Ga0070712_100808852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300006176\|Ga0070765_100612859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300006176\|Ga0070765_100683207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300006800\|Ga0066660_11432701	Not Available	542	Open in IMG/M
3300006806\|Ga0079220_11490822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300009683\|Ga0116224_10460396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300010048\|Ga0126373_12782216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300010376\|Ga0126381_101890230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300010376\|Ga0126381_103315246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300010379\|Ga0136449_100592661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1892	Open in IMG/M
3300010396\|Ga0134126_12491582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300012582\|Ga0137358_10845774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300012958\|Ga0164299_11183525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300012960\|Ga0164301_11466690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012984\|Ga0164309_11340446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300012984\|Ga0164309_11453587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300012989\|Ga0164305_11987326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300014168\|Ga0181534_10162865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300015242\|Ga0137412_10205423	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300015371\|Ga0132258_11593946	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300020579\|Ga0210407_10182206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1628	Open in IMG/M
3300020579\|Ga0210407_10282755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1294	Open in IMG/M
3300020579\|Ga0210407_10969483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300020579\|Ga0210407_11014096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300020580\|Ga0210403_10041872	All Organisms → cellular organisms → Bacteria	3661	Open in IMG/M
3300020580\|Ga0210403_10686229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300020580\|Ga0210403_10821724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300020581\|Ga0210399_10275458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1404	Open in IMG/M
3300020581\|Ga0210399_11599088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300020582\|Ga0210395_10660784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300020583\|Ga0210401_10407884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300020583\|Ga0210401_11100631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300021088\|Ga0210404_10119079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1354	Open in IMG/M
3300021170\|Ga0210400_10072782	All Organisms → cellular organisms → Bacteria → Proteobacteria	2694	Open in IMG/M
3300021170\|Ga0210400_11087602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300021171\|Ga0210405_10892588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300021178\|Ga0210408_10837248	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300021178\|Ga0210408_10900747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300021178\|Ga0210408_11401635	Not Available	526	Open in IMG/M
3300021180\|Ga0210396_10161075	Not Available	2013	Open in IMG/M
3300021180\|Ga0210396_11565730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300021384\|Ga0213876_10466538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300021402\|Ga0210385_10478727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300021403\|Ga0210397_10593010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300021403\|Ga0210397_11402231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300021405\|Ga0210387_10617583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300021405\|Ga0210387_11260796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300021405\|Ga0210387_11304226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300021420\|Ga0210394_10428815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300021432\|Ga0210384_10390300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254	Open in IMG/M
3300021478\|Ga0210402_10383863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1304	Open in IMG/M
3300021478\|Ga0210402_10790294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300021479\|Ga0210410_10756125	Not Available	855	Open in IMG/M
3300021559\|Ga0210409_10466758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1124	Open in IMG/M
3300021559\|Ga0210409_10894724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300021560\|Ga0126371_10929878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300022531\|Ga0242660_1096256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300022726\|Ga0242654_10409858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300025898\|Ga0207692_11212621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300025906\|Ga0207699_10536612	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300025928\|Ga0207700_10387869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300025929\|Ga0207664_10132351	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300025929\|Ga0207664_10719505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300027069\|Ga0208859_1013410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300027173\|Ga0208097_1007091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300027174\|Ga0207948_1005996	All Organisms → cellular organisms → Bacteria → Proteobacteria	1387	Open in IMG/M
3300027174\|Ga0207948_1007417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1251	Open in IMG/M
3300027605\|Ga0209329_1091137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300027684\|Ga0209626_1036872	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300027701\|Ga0209447_10035081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1395	Open in IMG/M
3300027729\|Ga0209248_10052810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1246	Open in IMG/M
3300027737\|Ga0209038_10058553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1154	Open in IMG/M
3300027824\|Ga0209040_10301065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300027903\|Ga0209488_10582295	Not Available	813	Open in IMG/M
3300028906\|Ga0308309_10586278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300030969\|Ga0075394_11413329	Not Available	548	Open in IMG/M
3300031057\|Ga0170834_103387795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300031057\|Ga0170834_111714681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300031231\|Ga0170824_102278923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300031231\|Ga0170824_106134802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300031231\|Ga0170824_119418505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300031231\|Ga0170824_124246008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300031446\|Ga0170820_15331944	Not Available	844	Open in IMG/M
3300031446\|Ga0170820_17309496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300031753\|Ga0307477_10066977	All Organisms → cellular organisms → Bacteria → Proteobacteria	2479	Open in IMG/M
3300031754\|Ga0307475_11425166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300031890\|Ga0306925_10285274	All Organisms → cellular organisms → Bacteria → Proteobacteria	1777	Open in IMG/M
3300031962\|Ga0307479_11123230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300031962\|Ga0307479_11670338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300032160\|Ga0311301_10075289	All Organisms → cellular organisms → Bacteria	7036	Open in IMG/M
3300032180\|Ga0307471_104322596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.28%
Host-Associated	Host-Associated	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.79%
Aquatic	Environmental → Aquatic	9.48%
Plants	Host-Associated → Plants	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.79%
Freshwater	Environmental → Aquatic → Freshwater	6.90%
Sediment	Environmental → Aquatic → Sediment	2.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.34%
Loam	Environmental → Terrestrial → Soil → Loam	28.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1003219532	3300000364	Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFVADPAKNPDDWYVKQHGGXIMVLEXKVFGRIFISEPETDEHLAFVSRQREP*
JGIcombinedJ51221_100966953	3300003505	Forest Soil	IWFLSTCKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP*
JGIcombinedJ51221_104713232	3300003505	Forest Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDDWLVKEQGGEIMVLELKVFGRLFISEPQTDEHLTFLSRQTKR*
Ga0062385_105145962	3300004080	Bog Forest Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPGESPDDWFVKNQGGGIMVLELKVFGRLFIPEPQIDEHFTFVSRQTRR*
Ga0062384_1004780642	3300004082	Bog Forest Soil	MPFFYSSGEEIRKSDRVLLHGEPGEIEFVADPAESPDDWFVKNQGGGIMVLELKVFGRLFIAEPETDKHLTFVSRQTGR*
Ga0062389_1019198231	3300004092	Bog Forest Soil	PLTAMPFFYSSGEQIRKGDRVLVHGEAGEVEFIADPAESPDDWFVKDQGGGIMVLELKVFGRIFITKPETDEHLTFVARQTER*
Ga0070714_1004407472	3300005435	Agricultural Soil	MPFFYSSGEEIRKGDRVLLHGEQGEIEFVADPAESPDDWLVKEQGGGIMVLGLKVFGRLFISKPKTDEHLTFVSGQTER*
Ga0070714_1009302621	3300005435	Agricultural Soil	EIRPGDRVLIHGEAGEIEFIADPAENPDDWYVKQHGGGIMVLELKVFGRIFITAPETDEHLAFVSRQREH*
Ga0070713_1004375271	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFV
Ga0070713_1009553872	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPFFYSSGGEIRPGDRVLIHGEAGEIEFIADPAENPDDWYVKQHGGGIMVLELKVFGRIFITAPETDEHLAFVSRQREP*
Ga0070713_1012025882	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	STVSVPGKTVVIVMPFFYSSGEEIRPGDRMLIHGEAGDIEFIADPTENPDDWYVKEHGGGIMVLELKVFGRIFISAPETDEHLTFVSRQSEP*
Ga0070713_1015572251	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPFFYSSGEEIRTGDRVLIHGEAGAIEFIADPAENPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFV
Ga0070710_101513023	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VPGKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDGHLAFVSRQREP*
Ga0070710_104642551	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIVDPAKNPDDRYVKQYGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP*
Ga0070711_1001551413	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VPGKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP*
Ga0070711_1010748312	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDGHLAFVSRQREP*
Ga0070711_1012257192	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPFFYSSGGEIRPGDRVLIHGEAGEIEFIADPAENPDDWYVKQHGGGIMVLELKVFGRIFITAPETDEHLAFVSRQR*
Ga0070708_1004280262	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FFYSSGEEIRKGDRVLLHGEQGEIEFVADPAESPDDWLVKEQGGGIMVLGLKVFGRLFISKPKTDEHLTFVSGQTER*
Ga0070762_108993232	3300005602	Soil	MPFFYSSGEQIRKGDRVLLHGEPGEIELVADPAESPDDWFVKNQGAGIMVLELKVFGRLFITEPETDGHLIFVSRQTKR*
Ga0070763_107402772	3300005610	Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDCYVKQHGGGIMVLELKVFGRVFISEPETDEHLAIVSRQREP*
Ga0070766_102009053	3300005921	Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDCYVKQHGGGIMVLELKVFGRIFITAPETDEHLAFVSRQREP*
Ga0070715_103448112	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPFFYSSGEEIRPGDRVLIHGEAGAIEFIADPAENPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP*
Ga0075018_101827113	3300006172	Watersheds	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP*
Ga0075018_106808602	3300006172	Watersheds	MPFFYSSGEEIRKGDRVLVHGEAGEVEFIADPAESPDDWFVKDQGGGIMVLELKVFGRIFITKPETDEHLTFVARQTER*
Ga0075014_1002639993	3300006174	Watersheds	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQRGGGIMVLELKVFGRIFISEPETDGHLAFVSRQREP*
Ga0070712_1008088522	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIVDPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDKHLTFVSRQREP*
Ga0070765_1006128592	3300006176	Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFVADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP*
Ga0070765_1006832071	3300006176	Soil	KPPLTAMPFFYSSGEEIRKGDRVLVHGEAGEVEFIADPAESPDDWFVKDQGGGIMVLELKVFGRIFITKPETDEHLTFVARQTER*
Ga0066660_114327011	3300006800	Soil	MPFFYSSGEEIRKGDRILLHGEPGEVERLGDPAESPDDWFVKNQGGGIMMPELKVFGRLFITEPETDEHLTFVSRQTRVVIAQRSKGRFSDL
Ga0079220_114908222	3300006806	Agricultural Soil	MPFFYSSGEEIRLGDRALIHGEAGEIEFIADPAKNPDDWYVKQQGGGIMVLELKVFGRIFISDPETDEHLAFVSRQRQP*
Ga0116224_104603961	3300009683	Peatlands Soil	GEDIRKGDRVLVHGEPGEIEFVADPVLNPEDWYVKALGGGIMILEPKVFGSLFIHDPTADEDLILVSRQRDSSG*
Ga0126373_127822161	3300010048	Tropical Forest Soil	VIVMPFFYQSGQEIRPGDRVLIHGETGEIEFIADPAENPDDWYVKEYGGGIMVLELKVFGRIFVTEPESDEHLTFVSRQSGP*
Ga0126381_1018902301	3300010376	Tropical Forest Soil	VIVMPFFYQSGQEIRPGDRVLIHGETGEIEFIADPAENPDDWYVKEYGGGIMVLELKVFGRIFVTEPESDEHLTFVSRQSGL*
Ga0126381_1033152461	3300010376	Tropical Forest Soil	MMPFFYQSGQEIRLDDRVLIITGEIEFIADPAENPDDWHVKEYGGGIMVLELKVFGRIFVTEPEADEHLIFVSRQGEP*
Ga0136449_1005926612	3300010379	Peatlands Soil	MPFFYSSGEDIRKGDRVLVHGEPGEIEFVADPVLNPEDWYVKALGGGIMILEPKVFGSLFIHDPTADEDLILVSRQRDSSG*
Ga0134126_124915821	3300010396	Terrestrial Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKHHGGGIIVLELKVFGRIFISEPETDKHLTFVSRQREP*
Ga0137358_108457742	3300012582	Vadose Zone Soil	VKEIRKGDRVLVHGEAGEVEFIADPAESPDDWFVKDQGGGIMVLELKVFGRISISKPETDEHLTFVARQTDR*
Ga0164299_111835252	3300012958	Soil	MPFFYSSGEEIRPGDRVLIHSEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDKHLTFVSRQREP*
Ga0164301_114666902	3300012960	Soil	EIWFLSTCKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIVDPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP*
Ga0164309_113404461	3300012984	Soil	WFLSTCKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIVDPAKNPDDWYVKQHGGGIMVLELKVFGRIFITEPKTDEHLTFVSRQREP*
Ga0164309_114535872	3300012984	Soil	VTRKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0164305_119873262	3300012989	Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQRE
Ga0181534_101628651	3300014168	Bog	MPFSYKSGEEIKQGDRVLLHGEPGEIEMVADPVSDPDHWAGKEMGAGIMVVEPKVFGRLFISEPEGYDDLIFVSRQKDAVGQHR*
Ga0137412_102054233	3300015242	Vadose Zone Soil	VIVMPFFYSSGEEVRPGDRVLIHGEAGKIEFIADPAENPGDWYGGGIMVLELKVFGRIFISAPETDEYLTFVSRQSAP*
Ga0132258_115939461	3300015371	Arabidopsis Rhizosphere	MPFFYSSGEEIRLGDRALIHGEAGEIEFIADPAKNPDDWYVKQQGGGIMVLELKVFGRIFISEPETDEHLAFVSRQRQP*
Ga0210407_101822063	3300020579	Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDNWLVKEQGGGIMVLELKVFGRLFISEPQTDEHLTFVSRQTKR
Ga0210407_102827552	3300020579	Soil	MPFFYSSGEEIRKGDRVLVHGEAGEVEFIADPAESPDDWFVKDQGGGIMVLELKVFGRIFITKPETDEHLTFVARQTER
Ga0210407_109694832	3300020579	Soil	MKSQEPRLLIAMPFFYSSGEQIRKGDRVLLHGEPGEIELVADPAESPDDWFVKNQGGGIMVLELKVFGRLFITEPETDGHLIFVSRQTKR
Ga0210407_110140961	3300020579	Soil	LVAMPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDDWLVKEQGGEIMVLELKVFGRLFISEPQTDEHLTFLSRQTKR
Ga0210403_100418725	3300020580	Soil	MPFFYASGEEIRPGDHVLIHGETGEIEFIADPAKNPDDSYVKEYGRGIMVLELKVFGRIFISEPETDDYLAFVSRQSEP
Ga0210403_106862291	3300020580	Soil	DARKGDRVLVHGEAGEVEFIADPAESPDDWFVKDQGGGIMVLELKVFGRIFITKPETDEHLTFVARQTER
Ga0210403_108217241	3300020580	Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0210399_102754582	3300020581	Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDDWLVKEQGGEIMVLELKVFGRLFISEPQTDEHLTFLSRQTKR
Ga0210399_115990881	3300020581	Soil	MPFFYSSGEQIRKGDRVLLHGEPGEIELVADPAESPDDWFVKNQGGGIMVLELKVFGRLFITEPETDEHLIFVSRQTKQ
Ga0210395_106607841	3300020582	Soil	MKSQEPRLLIAMPFFYSSGEQIRKGDRVLLHGEPGEIELVADPAESPDDWFVKNQGGGIMVLELKVFGRLFISEPETDEHLIFVSRQTKQ
Ga0210401_104078842	3300020583	Soil	MPFLYQSGQEIRPGDCVLIHGETGEIEFIADPAENPDDWFVKEHGGGIMVLELRVFGRIFITEPATDEHLSFLSRKP
Ga0210401_111006311	3300020583	Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDDWLVKEQGGGIMVLELKVFGRLFISEPQTDEHLTFVSRQTKR
Ga0210404_101190791	3300021088	Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIVDPAKNPDDRYVKQYGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0210400_100727823	3300021170	Soil	MKSQEPRLLIAMPFFYSSGEQIRKGDRVLLHGEPGEIELVADPAESPDDWFVKNQGGGIMVLELKVFGRLFITEPETDEHLIFVSRQTKR
Ga0210400_110876021	3300021170	Soil	WFLSTCKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIVDPAKNPDDRYVKQYGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0210405_108925882	3300021171	Soil	MPFFYSSGEEIRKGDRVLLHGEQGEIEFVADPAESPDDWLVKEQGGGIMVLGLKVFGRLFISKPKTDEHLTFVSGQTER
Ga0210408_108372481	3300021178	Soil	MPFFYSSGEEIRPGDRVLIHGEQGDIEFIADPTENPDDWYVKEHGGGIMVLELKVFGRIFISEPETDDYLAFV
Ga0210408_109007472	3300021178	Soil	GEEIRPGDRVLIHREAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0210408_114016352	3300021178	Soil	GEEIRKGDRVLVHGEAGEVEFIADPAESPDDRFVKDQGGGIMVLELKVFGRIFITKPETDEHLTFVARQTER
Ga0210396_101610754	3300021180	Soil	MPFFYSSGEEIRPGDRVLIHGEQGDIEFIADPTENPDDWYVKEHGGGIMVLELKVFGRIFISEPETDDYLAFVSRQSEP
Ga0210396_115657301	3300021180	Soil	MPFFYSSGEEIRKGDRVLVHGEAGEVEFIADPAESPDDWFVKDQGGGIMVLELKVFGRIFISKPETDEHLTFVARQTER
Ga0213876_104665381	3300021384	Plant Roots	MPFFYQSGQEIRTGDRVLIHGETGEIEFIADPAENLHGWYVKEYGGGIMVLELKVFGRIFVTEPETDEHLTF
Ga0210385_104787271	3300021402	Soil	MPFFYSSGEEIRPGDRVLIHGEASEIEFIVDPAKNPDDRYVKQYGGGIMVLELKVFGRIFISEPE
Ga0210397_105930102	3300021403	Soil	MKSQEPRLLIAMPFFYSSGEQIRKGDRVLLHGEPGEIELVADPAESPDDWFVKNQGGGIMVLELKVFGRLFITEPETDEHLIFVSRQTKQ
Ga0210397_114022311	3300021403	Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDNWLVKEQGGGIMVLELKVFGRLFISEPQTDEHLTFLSRQTKR
Ga0210387_106175832	3300021405	Soil	LVAMPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDDWLVKEQGGGIMVLELKVFGRLFISEPQTDEHLTFVSRQTKR
Ga0210387_112607961	3300021405	Soil	MPFFYSSGEEIRKGDRVLVHGEAGEVEFIADPAESPDDWFVKDQGGGIMVLELKVFGRIFITKPETTST
Ga0210387_113042261	3300021405	Soil	DVSFSMKSQEPRLLIAMPFFYSSGEQIRKGDRVLLHGEPGEIELVADPAESPDDWFVKNQGGGIMVLELKVFGRLFITEPETDEHLIFVSRQTKQ
Ga0210394_104288152	3300021420	Soil	MTSTVNKLTVEVEKYGFCQACKTVVTVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPEDWYVKQHGGGIMVLELKVFGRIFINEPQTDEHVAFVSRQSEP
Ga0210384_103903002	3300021432	Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDDWLVKEQGGGIMVLELKVFGRLFISEPQTDEHLTFLSRQTKR
Ga0210402_103838631	3300021478	Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADRAKNPDDSYVKEYGGGIMVLELKVFGRIFISEPETDDYLAFVSRQSEP
Ga0210402_107902941	3300021478	Soil	LVAMPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDNWSVKEQGGGIMVLELKVFGRLFISEPQTDEHLTFVSRQTKR
Ga0210410_107561251	3300021479	Soil	RKGDRVLVHGEVGEVEFIADPAESPDDRFVKDQGGGIMVLELKVFGRIFITKPETDEHLTFVARQTER
Ga0210409_104667583	3300021559	Soil	STVNKLTVEVEKYGFCQACKTVVTVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPEDWYVKQHGGGIMVLELKVFGRIFINEPQTDEHVAFVSRQSEP
Ga0210409_108947242	3300021559	Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIVDPAKNPDDRYVKQYGGGIMVLELKVFGRIFISEPETDEHL
Ga0126371_109298782	3300021560	Tropical Forest Soil	MPFFYQSGQEIRPGDRVLIHDETGEIEFIADPAENPDDWYVKEYGGGIMVLELKVFGRIFVTEPESDEHLTFVSRQSGL
Ga0242660_10962562	3300022531	Soil	VIVMPFFYSSGEEIRSGDRVLIHREAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0242654_104098581	3300022726	Soil	VPGKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAENPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLGFVSRQSEP
Ga0207692_112126211	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDGHLAFVSRQREP
Ga0207699_105366121	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VPGKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEHETDEHLA
Ga0207700_103878691	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	STVSVPGKTVVIVMPFFYSSGEEIRPGDRMLIHGEAGDIEFIADPTENPDDWYVKEHGGGIMVLELKVFGRIFISAPETDEHLTFVSRQSEP
Ga0207664_101323511	3300025929	Agricultural Soil	MPFFYSSGEEIRPGDRVLIHGEAGAIEFIADPAENPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHL
Ga0207664_107195051	3300025929	Agricultural Soil	MPFFYSSGGEIRPGDRVLIHGEAGEIEFIADPAENPDDWYVKQHGGGIMVLELKVFGRIFITAPETDEHLAFVSRQREH
Ga0208859_10134101	3300027069	Forest Soil	MPFFYSSSGEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0208097_10070911	3300027173	Forest Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDCYVKQHGGGIMVLELKVFGRVFISEPETDEHLAIVSRQREP
Ga0207948_10059963	3300027174	Forest Soil	IWFLSTCKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDCYVKQHGGGIMVLELKVFGRVFISEPETDEHLAFVSRQREP
Ga0207948_10074172	3300027174	Forest Soil	LIAMPFFYSSGEQIRKGDRVLLHGEPGEIELVADPAESPDDWFVKNQGGGIMVLELKVFGRLFITEPETDEHLTFVARQTER
Ga0209329_10911371	3300027605	Forest Soil	MVAMPFFYSSGEEIRNGDRVLLHGEPGEIELVADPAESPDDWLVKEQGGGIMVLELKVFGRLFISEPQTDEHLTFLSRQTKR
Ga0209626_10368722	3300027684	Forest Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFVADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0209447_100350812	3300027701	Bog Forest Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDDWFVKNQGGGIMVLELKVFGRLFIAEPETDKHLTFVSRQTGR
Ga0209248_100528101	3300027729	Bog Forest Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDDWFVKNQGGGIMVLELKVFGRLFIHEPET
Ga0209038_100585531	3300027737	Bog Forest Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELIADPAESPADWFVKNQGGGIMVLELKVFGRLFIPEPETDEYLTFVSRQTKG
Ga0209040_103010652	3300027824	Bog Forest Soil	MPFFYSSGEEIRPGDLVLIHGEAGEIEFIADPAKNPDDWYVKQHGRGIMVLELKVFGRVFISEPETDEHLAFVSRQREP
Ga0209488_105822951	3300027903	Vadose Zone Soil	TVVIVMPFFYSSGEEVRPGDRVLIHGEAGKIEFIADPAENPGDWYGGGIMVLELKVFGRIFISAPETDEYLTFVSRQSEP
Ga0308309_105862782	3300028906	Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDCYVKQHGGGIMVLELKVFGRVFISEPETDEHLAFVSRQREP
Ga0075394_114133291	3300030969	Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPASAEDWLVKKQGGGIMVLELKVFGRLFISEPQTDEH
Ga0170834_1033877951	3300031057	Forest Soil	MPFFYSSGEEIRPGDRVLIHGEAGDVEFIADPTENPDDWYVKEHGGGIMVLELKVFGRIFVTEPETDEHLTFVSRQSEP
Ga0170834_1117146812	3300031057	Forest Soil	MPFFYSSGEEVRKGDRVLLHGEAGEIEFIADPAESPDDWFVKDQGGGIMVLELKVFGRLFISKPETDEHLTFMSRQTQQ
Ga0170824_1022789232	3300031231	Forest Soil	MPFFYSSGEEIRPGDRVLIHSEAGEVEFIADPVKNPYDWHVKQYGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0170824_1061348021	3300031231	Forest Soil	MPFFYSSGKEIRPGDQVLIHGETGEIEFIADPAKNPDDWYVKEYGAGIMVLELKVFGRIFISEPETDD
Ga0170824_1194185052	3300031231	Forest Soil	MPFFYSSGEEVRKGDRVLLHGEAGEIEFIADPAESPDDWFVKDQGGGIMVLELKVFERLFISKPETDEHLTFMSRQTKQ
Ga0170824_1242460081	3300031231	Forest Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDNWLVKEQGGGIMVLELKVFGRLFISEP
Ga0170820_153319441	3300031446	Forest Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPASAEDWLVKKQGGGIMVLELKVFGRLFISEPQTDEHLTFVSRQTKP
Ga0170820_173094962	3300031446	Forest Soil	MPFFYSSGKEIRPGDQVLIHGETGEIEFIADPAKNPDDWYVKEYGAGIMVLELKVFGRIFISEPETD
Ga0307477_100669772	3300031753	Hardwood Forest Soil	MPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAENPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0307475_114251662	3300031754	Hardwood Forest Soil	MPFFYSSGEEVRKGDRVLLHGEAGEIEFIADPAESPDDWFVKDQGGGIMVLELKVFGRLFISKPETYEHLTFMSRQTKQ
Ga0306925_102852744	3300031890	Soil	EEIRQGDRVLIHGEAGKIELIADPAENPDDRYVKEHGGGIMVLELKVFGRVFITDPETDEQLTFVSRQSEP
Ga0307479_111232302	3300031962	Hardwood Forest Soil	MPFFYSSGEEIRKGDRVLLHGEPGEIELVADPAESPDDWLVKEQGGGIMVLELKVFGWLFISQPQTDEHLTFVSRQTKR
Ga0307479_116703381	3300031962	Hardwood Forest Soil	FLSTCKTVVIVMPFFYSSGEEIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKQHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP
Ga0311301_100752896	3300032160	Peatlands Soil	MPFFYSSGEDIRKGDRVLVHGEPGEIEFVADPVLNPEDWYVKALGGGIMILEPKVFGSLFIHDPTADEDLILVSRQRDSSG
Ga0307471_1043225962	3300032180	Hardwood Forest Soil	SGEDIRPGDRVLIHGEAGEIEFIADPAKNPDDWYVKKHGGGIMVLELKVFGRIFISEPETDEHLAFVSRQREP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079265

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences