Metagenome Family F079261

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079261
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	93 residues
Representative Sequence	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVN
Number of Associated Samples	80
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.00 %
% of genes near scaffold ends (potentially truncated)	92.24 %
% of genes from short scaffolds (< 2000 bps)	90.52 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.966 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (40.517 % of family members)
Environment Ontology (ENVO)	Unclassified (47.414 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.448 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.31% β-sheet: 3.45% Coil/Unstructured: 42.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13561	adh_short_C2	12.93
PF02954	HTH_8	6.90
PF00106	adh_short	3.45
PF07883	Cupin_2	3.45
PF07690	MFS_1	1.72
PF14534	DUF4440	1.72
PF00486	Trans_reg_C	0.86
PF05368	NmrA	0.86
PF07635	PSCyt1	0.86
PF06863	DUF1254	0.86
PF16884	ADH_N_2	0.86
PF04978	DUF664	0.86
PF00440	TetR_N	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.97 %
Unclassified	root	N/A	6.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.97 %
Unclassified	root	N/A	6.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.97 %
Unclassified	root	N/A	6.03 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	10.34 %
Unclassified	root	N/A	6.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.03 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.03 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.03 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.31 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.03 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2.59 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.03 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2.59 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.86 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.03 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2.59 %
Micromonospora lupini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	0.86 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100369316	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300000955\|JGI1027J12803_105913259	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300004267\|Ga0066396_10110825	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300004479\|Ga0062595_102366587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	526	Open in IMG/M
3300005332\|Ga0066388_103255700	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005536\|Ga0070697_101600095	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005713\|Ga0066905_102016311	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005764\|Ga0066903_104116075	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300006162\|Ga0075030_100999411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300006163\|Ga0070715_10401995	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300007258\|Ga0099793_10358464	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300009038\|Ga0099829_10397614	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300009088\|Ga0099830_10372284	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300009089\|Ga0099828_10671855	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300009089\|Ga0099828_10887594	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300009098\|Ga0105245_10753036	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300009100\|Ga0075418_13083368	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300009101\|Ga0105247_10930066	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300009101\|Ga0105247_11419092	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300009147\|Ga0114129_10427728	All Organisms → cellular organisms → Bacteria → Proteobacteria	1740	Open in IMG/M
3300009147\|Ga0114129_10797633	All Organisms → cellular organisms → Bacteria → Acidobacteria	1205	Open in IMG/M
3300009147\|Ga0114129_10851622	All Organisms → cellular organisms → Bacteria → Acidobacteria	1159	Open in IMG/M
3300009147\|Ga0114129_13524511	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300009148\|Ga0105243_11471767	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300009545\|Ga0105237_11934327	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300009792\|Ga0126374_10476517	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300009792\|Ga0126374_10653703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	784	Open in IMG/M
3300009792\|Ga0126374_10897620	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009826\|Ga0123355_11459181	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300010046\|Ga0126384_11113918	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300010048\|Ga0126373_11372345	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010048\|Ga0126373_11869318	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300010048\|Ga0126373_13052588	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300010339\|Ga0074046_10089214	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300010359\|Ga0126376_11245202	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300010361\|Ga0126378_11010422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	935	Open in IMG/M
3300010361\|Ga0126378_11561219	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300010373\|Ga0134128_12895059	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300010376\|Ga0126381_101528929	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300010376\|Ga0126381_101806856	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300010376\|Ga0126381_103460787	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300010398\|Ga0126383_11982713	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300010398\|Ga0126383_12659639	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300010398\|Ga0126383_13546666	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300010401\|Ga0134121_11179460	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300011270\|Ga0137391_10851101	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300011270\|Ga0137391_11411573	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300011271\|Ga0137393_10139303	All Organisms → cellular organisms → Bacteria → Acidobacteria	2016	Open in IMG/M
3300011271\|Ga0137393_10603301	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300011271\|Ga0137393_11031287	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012096\|Ga0137389_11529185	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012189\|Ga0137388_10297303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1480	Open in IMG/M
3300012202\|Ga0137363_10379025	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300012205\|Ga0137362_11182478	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300012206\|Ga0137380_10865557	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300012208\|Ga0137376_10551811	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300012209\|Ga0137379_10502349	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300012210\|Ga0137378_10703792	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300012210\|Ga0137378_11842432	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012354\|Ga0137366_11227655	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012361\|Ga0137360_11752541	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300012362\|Ga0137361_11068336	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300012362\|Ga0137361_11255442	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012363\|Ga0137390_11223409	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300012363\|Ga0137390_11857525	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012683\|Ga0137398_10576877	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300012685\|Ga0137397_10534246	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300012917\|Ga0137395_10405655	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300012917\|Ga0137395_10863686	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300012918\|Ga0137396_11226449	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300012922\|Ga0137394_10084219	All Organisms → cellular organisms → Bacteria	2664	Open in IMG/M
3300012922\|Ga0137394_10514591	All Organisms → cellular organisms → Bacteria → Acidobacteria	1016	Open in IMG/M
3300012923\|Ga0137359_10816911	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300012923\|Ga0137359_11076427	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300012924\|Ga0137413_10847135	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300012924\|Ga0137413_11196685	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012927\|Ga0137416_10569240	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300012927\|Ga0137416_11118115	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300012927\|Ga0137416_11983131	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012929\|Ga0137404_11891350	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300012930\|Ga0137407_10235136	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300012930\|Ga0137407_12438361	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012948\|Ga0126375_11055863	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012971\|Ga0126369_10085296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2815	Open in IMG/M
3300012971\|Ga0126369_12370720	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300012971\|Ga0126369_13192784	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300013296\|Ga0157374_10909031	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300013297\|Ga0157378_10781237	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300015359\|Ga0134085_10562431	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300015373\|Ga0132257_103085505	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300016422\|Ga0182039_11221338	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300016422\|Ga0182039_11807661	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300018482\|Ga0066669_12326253	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300020579\|Ga0210407_11291924	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300020580\|Ga0210403_11365772	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300020583\|Ga0210401_10875227	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300021403\|Ga0210397_10540716	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300021405\|Ga0210387_10598193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	980	Open in IMG/M
3300021432\|Ga0210384_10305370	Not Available	1432	Open in IMG/M
3300021432\|Ga0210384_10935701	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300021559\|Ga0210409_10628262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	943	Open in IMG/M
3300021560\|Ga0126371_10029346	All Organisms → cellular organisms → Bacteria	5133	Open in IMG/M
3300021560\|Ga0126371_10972720	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300024288\|Ga0179589_10071841	All Organisms → cellular organisms → Bacteria → Acidobacteria	1358	Open in IMG/M
3300024330\|Ga0137417_1051610	All Organisms → cellular organisms → Bacteria	2420	Open in IMG/M
3300027663\|Ga0208990_1106349	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300031057\|Ga0170834_100864657	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300031819\|Ga0318568_10584569	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300031910\|Ga0306923_11109258	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300031945\|Ga0310913_11173968	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.93%
Host-Associated	Host-Associated	12.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.07%
Plants	Host-Associated → Plants	11.21%
Aquatic	Environmental → Aquatic	0.86%
Arthropoda	Host-Associated → Arthropoda	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.34%
Sediment	Environmental → Aquatic → Sediment	0.86%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.34%
Loam	Environmental → Terrestrial → Soil → Loam	6.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	63.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	40.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1003693163	3300000364	Soil	MQRLGLAFLACTLVIAVAGSASAGDARDEAAVRALGDSFAKAFVEKNAEARASQFAENGTFVTPVGAFLQGRATMVKDFGSE
JGI1027J12803_1008457872	3300000955	Soil	GATGAASAFKPGDEGAIRALGDTFANAFVQKNAQLRASLFAEDATFVTPQGDFLQGRVAMVKDFGPEAQ
JGI1027J12803_1059132591	3300000955	Soil	MQRLGLAFLACTLVIAVAGSASAGDARDEAAVRALGDSFAKAFVEKNAEARASQFAENGTFVTPVGAFLQGRATMVKDFGSEAQAVNGST
Ga0066396_101108251	3300004267	Tropical Forest Soil	MKTKEKEMKISQTFALRGLLQGLGLAFLACALVIGATGSASAGPRDEAAVRSLGDSFAKAFVEKNAELRASLFAENGTFLTPVGHFLQGRDDMVKEFGPEAQQAVNGNTQAAFSNYRVRFIK
Ga0062595_1023665871	3300004479	Soil	MQRLGLACLACTLGIGATGSASAGQAQDEAAVRALGDTFAKAFVQKNAELRASIFAEDGTFVTPRGDFLQGRVAMVKDFGPEAQQA
Ga0066388_1032557001	3300005332	Tropical Forest Soil	MKTKEKEMKISQTSALRGRMQRLGSALLACTLVIGATGSASAAGAQDESAVRALGDTFAKAFIQKNPELRASLFAENGTFVTPVGDFLQGRVTMVKDFGSEAQAVNST
Ga0070697_1016000951	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KHKSAPRGLMQRLGLAFLAYTLVIGASGSASARQARDEAAVRALGDTFAKTFVQKNAELRASIFTEDGTIVTPRGDFLGEAL*
Ga0066905_1020163111	3300005713	Tropical Forest Soil	MAISQAYALRRPMLRLGLGSLVCLVIGATGSVRAADARDEASVRALGDTFAKAFVQKDANLRASIFAEDGTFVTPVGEFLQGRVAMVKDFGPEAQQAVNGTTQAAFSN
Ga0066903_1041160751	3300005764	Tropical Forest Soil	MISQEREMKTAQSQDEAAVRALGDDFVKAFVQKNAEQRASLFAENGTFMTPVGAFLQGRIAMVKDFGPEAQQLVNSNTQAAFSDYRIRFIK
Ga0075030_1009994112	3300006162	Watersheds	MQRLGLTLLACTVVIGVTGSASASGPQDEAAVRALGDNFAKAFLQKNAELRASLFVENGTFVTPQGGFLQGRVAMVNDFGQEAQAVSGNTQA
Ga0070715_104019952	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MQGVGLALITCALFIGATGSASAGGAQDEAAVRALGDNFAKAFVEKNAELRASLFAEGGTFVTPVGDFLQGRAKMVKDFGSEAQAVN
Ga0099793_103584641	3300007258	Vadose Zone Soil	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFANAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAM
Ga0099794_103193621	3300007265	Vadose Zone Soil	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFANAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNANTQATFSNYRIRFIKPDVSVVEALLTVRDVHSPPAPIIPVLVL
Ga0099829_103976142	3300009038	Vadose Zone Soil	MQRLGLTLLACTLVLGVTGSASAGDARDEAAVRALGDSFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAEQAV
Ga0099830_103722842	3300009088	Vadose Zone Soil	MQRLGLTLLACTLVLGVTGSASAGDARDEAAVRALGDSFAKAFVQKDAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPE
Ga0099828_106718552	3300009089	Vadose Zone Soil	MQRLGLACLAWTLGIGATGSASAGQAQDEAAVRALGDTFAKAFVQKNAELRASIFAEDGTFVTPRGDYLQGRVAMVKDFGPEAQQAVNVTTQAAFSNYRVRF
Ga0099828_108875941	3300009089	Vadose Zone Soil	MQGVGLALITCALFIGATGSASAGGAQDEAAVRALGDNFAKAFVEKNAELRASLFAEDGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNGTTQAAF
Ga0105245_107530361	3300009098	Miscanthus Rhizosphere	MQRLGLAFLATTLVIGATGAASAFKPGDEGAIRALGNTFANAFVQKNAQLRASLFAEDATFVTPQGDFLQGRVAMVKDFGPEAQQA
Ga0075418_130833682	3300009100	Populus Rhizosphere	MRRLGLASLACTLVIGATGFVSAFRPRDEAAIRALADTFAIAFVQKNAQLRASLFADDATFVTPQGDFLQGRVAMVKDFGPEAQQAVNGTT
Ga0105247_109300661	3300009101	Switchgrass Rhizosphere	MQRLGLTLLACTLVIGAARSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDF
Ga0105247_114190921	3300009101	Switchgrass Rhizosphere	MQRLGLAFLATTLVIGATGAASAFKPGDEGAIRALGNTFANAFVQKNAQLRASLFAEDATFVTPQGDFLQGRVAMVKDFGPEAQQ
Ga0114129_104277282	3300009147	Populus Rhizosphere	MRRLGLASLACTLVIGATGFVSAFRPRDEAAIRALADTFAIAFVQKNAQLRASLFADDATFVTPQGDFLQGRVALVKDFGPEAQQAVNGTTQAAFS
Ga0114129_107976331	3300009147	Populus Rhizosphere	MKRLGFACLAWTLGIGATGSASAGQAQDEAAVRALGDTFAKAFVQKNAELRASIFAEDGTFVTPRGDFLQGRVAMVKDFGPEAQQAVNGT
Ga0114129_108516222	3300009147	Populus Rhizosphere	MQRLGFACLAWTLGIGATGSASAAQAQDEAAVRALGDTFAKAFVQKNAELRASIFAEDGTFVTPRGDFLQGRVAMVKDFGPEAQQAVNGT
Ga0114129_135245112	3300009147	Populus Rhizosphere	MQRLGLACLACTLGIGATGSASAGQAQNEAAVRALGDTFAKAFVHKNAELRASIFAEDGTFVTPRGDFLQGRVAMV
Ga0105243_114717671	3300009148	Miscanthus Rhizosphere	MQRLGLAFLATTLVIGATGAASAFKPGDEGAIRALGNTFANAFVQKNAQLRASLFAEDATFVTPQGDFLQGRVAMVKDFGPEAQQAVNGTTQAA
Ga0105237_119343272	3300009545	Corn Rhizosphere	MQRLGLALLACTLVIGGTGSASAGEAQDEAALRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNAN
Ga0126374_104765171	3300009792	Tropical Forest Soil	LAFLACTLVIGAIGTASAGGAQDEAAVRALGDTFAKAFIEKNPELRASLFVENGTFVTPVGDYLQGRVAMVKDFGSEAQAVNDTTQAAFSNY
Ga0126374_106537032	3300009792	Tropical Forest Soil	MKTKEKEMKISKTSALRSLMQRLGLALLTCTLVIGATGSAIAGQTRDEAAVRALGDTFAKAFIQKNPELRASLFAENGTFVTPVGDYLQGRVAMVKD
Ga0126374_108976201	3300009792	Tropical Forest Soil	MQRLGLVLLAYTLLIGGTGPASAQARDEATVRALGDNFAKAFVQKNAEQRASLFAQNGTFLTPVGDFLQGHAAMVQDFGPEAEQAVTPATQAALSNY
Ga0123355_114591811	3300009826	Termite Gut	MNTNNSKPQEHRGPIQRLGLTLLASALVIGATANASAQSRDEAAVRALGDGFAKAFVQKNAEARASLFAENGTFVTPQGDYLQGHGAMVKDFGPEAQQAVNGSTQAALSNYRVRFIKPD
Ga0126384_111139182	3300010046	Tropical Forest Soil	MQGLGLAFLACTLVIGATGTASASSARDERAVRGLGDAFANAFIQKNAELRASIFAEDGTFVTPQGDFLQGRVAMVKDFGPEA
Ga0126373_113723451	3300010048	Tropical Forest Soil	MHQLGSALLACTLVTGVAGSAGANEARDEAAVRALGDGFAKAFVQKNAELRASLFDEEGTFVTQQGHFLQGRREMVKD
Ga0126373_118693182	3300010048	Tropical Forest Soil	MQRLGLTLLACTLVIGVSGAANASQAQDEAAIRALGDNFAKAFVQKNAEQRASLFVENGTFLTPVGDFLQGHVAMVKDFGPEA
Ga0126373_130525881	3300010048	Tropical Forest Soil	MQRLGLTLLAFTLVIGVTGSASAGQAQDEAAVRALGDNFAKAFVQKNAEQRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNSNTEAAFSNYRIRFIKPD
Ga0074046_100892144	3300010339	Bog Forest Soil	MQRLGLTLLACALVVGVTGSASASGPQDEAAVRALGDNFAKAFLQKNAELRASLFVENGTFVTPQGGFLQGRVAMVNDFGQEAQAVSGNTQAAFSNYRIRFINPDV
Ga0126376_112452021	3300010359	Tropical Forest Soil	MKISQTLRGLLQGLGLAFLACALVIGATGSASAGPRDEAAVRSLGDTFAKAFVEKNAELRASLFAENGTFLTPVGHFLQGRDDMVKEFGPEAQQAVNGNTQAAFSNYRVRFIKPDVAF
Ga0126372_111568061	3300010360	Tropical Forest Soil	MLVIGATGSASVGQTRDEAAVRALGDTFVKGFIEKNAELRASLFTEDGTFVTPPGNFLQGRVAMVKEFGPEAQQAV
Ga0126378_110104222	3300010361	Tropical Forest Soil	MQGLGLGVLACTLVTAATGSASAQSRDETAVRALGDNFAKAFVQKNPEQRASLFADNGTFVTPVGDFLQGHAAMVKDFGSEAQ
Ga0126378_115612191	3300010361	Tropical Forest Soil	MQRLGLTLLAFTLVIGLTGSASASQAQDEAAVRALGDGFAKAFVQKNAEQRASLFAENGTFVTPVGDFLQGHATMVKDFGS*
Ga0134128_128950591	3300010373	Terrestrial Soil	MQRLGLALLACTLVIGGTGSASAGEAQDEAALRGLGDTFAKAFVQKNAELRASLFAEDGTFVTPVGDFLQGRVAMVKDFSPEAQQAVNANTQAAFSNYRIRFIKP
Ga0126381_1015289292	3300010376	Tropical Forest Soil	MQRLGLVFLACTLVIGVTGSASAGQSRDEAAVRALGDAFAKAFIEKNAELRASLFTDDGTFVTPPGNFLQGRVAMVKEFGPEAQAVNSSTQAAFSNYRV
Ga0126381_1018068562	3300010376	Tropical Forest Soil	MQRLGLALLACTLAIGVTVSASAGGAQDESAVRSLGDTFAKAFIQKNPELRASLFAENGTFVTPTGDYLQGHVAMVKDFGSEAQAVNGSTQA
Ga0126381_1034607871	3300010376	Tropical Forest Soil	MQLLGLTLLAFALVIGVTGTASASQTQDESAIRALGDNFAKAFVEKNPEQRTSLFAENGTFVTPVGDFLQGHAAMVKDFGSEAQAVTATTQAAFSNYKIRFIKPD
Ga0126383_119827131	3300010398	Tropical Forest Soil	VQPLGSAVLASMLVIGATGIGSAGEAQDEAAVRALGDTFAKAFVQKNAELRASIFAEDGTFVTPQGDFLQGRIAMVKDFGPEAQQAVN
Ga0126383_126596392	3300010398	Tropical Forest Soil	MQRLGFALVACTLVIGATVSASAGEARDEAAVRALGDGFAKAFVEKNAELRASLFAENGTFVTPQGHFLQGRGEMVKDFGPEAQQAVNATTQAAFSNY
Ga0126383_135466661	3300010398	Tropical Forest Soil	MQRLGVALLACTLVIGGTGSASANEARNEAAVRALGDTFAKAFVQKSAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGSEAQAVNS
Ga0134121_111794601	3300010401	Terrestrial Soil	MQRLGLTLLACTLVIGATGSASAGEAQNEAAVRGLGDTFARAFGQKDGQIRATLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNANTQ
Ga0137391_108511011	3300011270	Vadose Zone Soil	MQRLGLTLLACTLVIGVIGSASAGQAQDEAAVRALGDNFAKAFVQKNAEQRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAEQAVNGSTQAAFSNYRVR
Ga0137391_114115731	3300011270	Vadose Zone Soil	MQRLGSAFLACALVIGVAGSARAGETRDETAVRALGDTFANALVQKNAELRASIFAEDGTFVTPQGDFLQGRVAMV
Ga0137393_101393031	3300011271	Vadose Zone Soil	MLVIGVIGSASAGEARDEAAVRALGDTFAKAFVQKNAELRASIFTEDGTFVTPQGDFLQGRVAMVKDFGPEAEQAVNGTTQAA
Ga0137393_106033011	3300011271	Vadose Zone Soil	MQRLGFAFLACALAIGATGTASAGSARDEGAVRGLGDAFANAFVQKNAELRASLFAEDGTFVTPQGDFLQGRVAMVKDFGPEAEQAVNGTTQAAFSNY
Ga0137393_110312871	3300011271	Vadose Zone Soil	MQRLGFALLACTLVIGATRSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNANTQAAFSN
Ga0137389_115291851	3300012096	Vadose Zone Soil	MQRLGLAFLACTLVIGATGSASAGEARDEAAVRALGDTFAKAFVQKNAELRASIFTEDGTFVTPQGDFLQGRVAMVKDFAPEAEQAVNGTTQAAFSNYRVRF
Ga0137388_102973033	3300012189	Vadose Zone Soil	MQRLGSAFLAFALVIGVAGSAAAGETRDETAVRALVDTFANALVQKNAELRASIFAEDGTFVTPQGDFLQGRVAMVKDFGPEAQQAVNER
Ga0137363_103790251	3300012202	Vadose Zone Soil	MQRLGFAFLACALAIGATGTASAGSARDEGAVRGLGDAFANAFVQKNAELRASLFAEDGTFVTPQGDFLQGRVAMVKDFGPEAEQAVNGTTQAAFSNYRVRFIKPDPVIRCVFTSCRSKRRNSATQ*
Ga0137362_111824781	3300012205	Vadose Zone Soil	MQRLGSAFLACVLVIGVAGSARAGETRDETAVRALGDTFANALVQKNAELRASIFAEDGTFVTPQGDFLQGRVAMVKD
Ga0137380_108655572	3300012206	Vadose Zone Soil	MQRLGLAFLASTLVIGAAGSASAGEARDEVSVRALGDTFANAFVQKNPELGASLFAEDGTFVTPQGDFLQGRVAMVKDFGPEAQQAV
Ga0137376_105518111	3300012208	Vadose Zone Soil	MQRLGFAFLACALAIGATGTASAGSARDEGAVRGLGDAFANAFVQKNAELRASLFAEDGTFVTPQGDFLQGRVAMVKD
Ga0137379_105023491	3300012209	Vadose Zone Soil	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNANTQAAFSNYRIR
Ga0137378_107037922	3300012210	Vadose Zone Soil	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNANTQAAFSNYRIRFIKPDVAVADA
Ga0137378_118424321	3300012210	Vadose Zone Soil	MQRAGLASLAFALVIGATGSASAGETQDEIAVRALGDTFANAFVQKNAELRASTFAEDGTFVTPQGDFLQGRAAMVKDFGPEAQQAVNRSTQAAFSNYRVR
Ga0137366_112276551	3300012354	Vadose Zone Soil	MQRLGLTILACTLVIGATGSASAGEARDEVSVRALGDSFAKAFVKKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVN
Ga0137360_117525411	3300012361	Vadose Zone Soil	MQRLGLTLLACTLVIGATSSASAGEAQDDAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNAN
Ga0137361_110683361	3300012362	Vadose Zone Soil	MQRLGLTLLACTLVIGVIGSASAGQAQDEAAVRALGDNFAKAFVQKNAEQRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVTATTQA
Ga0137361_110685641	3300012362	Vadose Zone Soil	MQRLGSAFLAFALVIGVAGSAAAGETRDETAVRALVDTFANALVQKNAELRASIFAEDGTFVTPQGDFL
Ga0137361_112554421	3300012362	Vadose Zone Soil	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQAVTATTQAAFS
Ga0137390_112234092	3300012363	Vadose Zone Soil	MQRLGFALLACTLVIGATRSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQ
Ga0137390_118575252	3300012363	Vadose Zone Soil	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEA
Ga0137398_105768772	3300012683	Vadose Zone Soil	MQRLGSAFLAFALVIGVAGSAAAGETRDETAVRALVDTFANALVQKNAELRASIFAEDGTFVTPQGDFLQGRVAMV
Ga0137397_103267021	3300012685	Vadose Zone Soil	MQRLGLACLACTLGIGATGSASAGQAQGEAAVRALGDTFAKAFVQKNAELRASIFAEDGTFVTPRGDFLQVRVAMVKDFGPEAQQAVNGTTQAAFSNYRVSFNKHTLALHDALLTVHNANGPDGIIIPAI
Ga0137397_105342461	3300012685	Vadose Zone Soil	MQRLGFACLACTLGIGATGSASAGQAQDEAAVRALGDTFAKAFVQKNAELRASIFAEDGTFVTPRGDFLQGRVAMVKD
Ga0137395_104056551	3300012917	Vadose Zone Soil	MQRLGIAFFACTLIIGATGSASAFEPPAERAIRALGDTFANAFVQKNAELRASLFAEDATFVTPQGDFLQGRVAMVKDFGPEAQQAVNGTTQA
Ga0137395_108636861	3300012917	Vadose Zone Soil	MQRLGLACLACTLGIGATGSASAGQAQDEAAVRALGDTFAKAFVQKNAELRASIFAEDGTFVTPRGDFLQGRVAMVKD
Ga0137396_112264491	3300012918	Vadose Zone Soil	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFANAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQ
Ga0137394_100842191	3300012922	Vadose Zone Soil	MQRLGLAFLACTLGIGATGSASAGEARDEAAVRALGDTFAKAFVQKNAELRASIFTEDGTFVTPQGDFLQGRVAMVKDFGPEAEQAVN
Ga0137394_105145911	3300012922	Vadose Zone Soil	MQRLGLACLACTLGIGATGSASAGQAQGEAAVRALGDTFAKAFVQKNAELRASIFAEDGTFVTPRGDFLQGRVAMVKDFG
Ga0137359_108169111	3300012923	Vadose Zone Soil	MQGLGLAFLACTLVIGATGSANAGEARDEAAIRALGDNFAKAFVQKNAELRASLFAEDGTFVTPVGNFLQGRVAMVKEFGPEAQAVTGTTQAAFSN*
Ga0137359_110764271	3300012923	Vadose Zone Soil	MQRAGLASLACALVIGATGSASAGETQDETAVRALGDTFANAFVQKNAELRASVFAEDGTFVTPQDDFLQGRAAMVKDFGPEAQQAVNGTTQAAFSNYRVRFIKPDI
Ga0137413_108471352	3300012924	Vadose Zone Soil	MQRLGLACLACTLGIGATGSASAGQAQDEAAVRALGDTFAKAFVQKNAELRASIFAEDGTFVTPRGDFLQGRVAMVKDFGPEAQQAVNNTTQAAFSNG
Ga0137413_111966851	3300012924	Vadose Zone Soil	MQRLGFALLACTLVLGATRSASAAEAQDEAAVRGLGDTFARAFVQKNAELRASLFAENGTFVTPVGEFLQGRVAMVKDFGPEAQQAVNANTQARFSNYRIRFIKPDVAVADALLT
Ga0137416_105692402	3300012927	Vadose Zone Soil	MQRLGFAFLACALAIGATGTASAGSARDEGAVRGLGDAFANAFVQKNAELRASLFAEDGTFVTPQGDFLQGRVAMVKDFGPEAQQAVNGSTQAAFS
Ga0137416_111181151	3300012927	Vadose Zone Soil	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFANAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMAKDFGPEAQQAVNANTQAAFSNYRIRFIKPDVAVADALLTM
Ga0137416_119831311	3300012927	Vadose Zone Soil	MQRLGFALLACTLVIGATRSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVN
Ga0137404_118913501	3300012929	Vadose Zone Soil	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVN
Ga0137407_102351361	3300012930	Vadose Zone Soil	MQRLGLAFLACTLIIGATGSASAFEPPAERAIRALGDTFANAFVQKNAELRASLFAEDATFVTPQGDFLQGRVAMVKDF
Ga0137407_124383611	3300012930	Vadose Zone Soil	MQRLGLTLLACTLVIGATGSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNANTQA
Ga0126375_110558631	3300012948	Tropical Forest Soil	LVLGVTGSAGAGQAQDEAAVRALGDNFAKAFVQKNAERRASLFAENGTFVTPVGDFLQGRTAMVKDFGPEAQQAVNSNTQAAFSDYRIRFIKPDI
Ga0126369_100852963	3300012971	Tropical Forest Soil	MKTKEKEMKVSQTSALRGLMQRLGFALLICTLVIGTTGSAIAGETRDESAIRSLGDTFAKAFIQKNPELRASLFAENGTFVTPVGDYLQGHVAMVKDFGSEAQAVNDTTQAAFSN
Ga0126369_107021781	3300012971	Tropical Forest Soil	MDITGQARDEAALRALGDTFGKAFIQKNAELRASLFAENGTFVTPVGDYLQGRVAMVKDFGPESQQ
Ga0126369_123707202	3300012971	Tropical Forest Soil	MQRLGLTLLAFTLVLGVTGSASASQTQDEAAIRALGDGFAKAFVEKNPELRTALFAENGTFLTPVGDVLQGHAAMVKDFGSEAQAVT
Ga0126369_131927841	3300012971	Tropical Forest Soil	MQLLGLTLLAFALVIGVTGTASASQTQDESAIRALGDNFAKAFVEKNPEQRTSLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVTATTQAAFSNYRVSFIN
Ga0157374_109090312	3300013296	Miscanthus Rhizosphere	MQRLTLALLACTLVIGATGSASAGEAQDEATVRALGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNANTQAALSN
Ga0157378_107812372	3300013297	Miscanthus Rhizosphere	MQRLGLAFLACTLVIGATGSASAGETRDETAVRALGDTFANALVQKNAELRAPIFAEDGTFVTPQGDFLQGRVAMVKDFGPEA
Ga0134085_105624311	3300015359	Grasslands Soil	MQRLGLTLLACTLVLGVTGSASAGDARDEAAVRALGDSFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAEQAVNGSTQAAF
Ga0132257_1030855051	3300015373	Arabidopsis Rhizosphere	MQRLGLAFLVWTLVIGASGSASAGQARDEAAVRALGDNFAKAFVEKNAELRASLFAEDGTFVTPVGDFLQGRAKMVKDFGSEAQAVNGSTQ
Ga0182039_112213382	3300016422	Soil	MQRLGLTLLALTLVIGVAASARAGQTQDEAEVRALGDNFAKAFVQKNAEQRASLFVENGTFVTPVGDFLQGRSAMVKD
Ga0182039_118076612	3300016422	Soil	MKTKEKEMKISQTSALRGPIQRLGLALLACTFVMGVTGSASAGQAQDEAAVRALGDTFAKAFIQKNAELRASLFAENGTFVNPVGDYMQGRVAMVKDFGPESQQLVNS
Ga0066669_123262531	3300018482	Grasslands Soil	MQGVGLALITCALFIGATGSASAGGAQDEAAVRALGDNFAKAFVEQNAELRASLFAEDGTFVTPVGDFLQWRAKMVKEFGSEAQAVNGST
Ga0210407_112919241	3300020579	Soil	MQRLGLAFLAYTLVIGASGSASAGQARAEAAVRALGDTFAKTFVQKNAELRVSIFTEDGTFVTPPGDFLQGRVAMVKDFGPDAEQAV
Ga0210403_113657721	3300020580	Soil	MQRLGLAFLAYTLVIGASGSASAGQARAEAAVRALGDTFAKTFVQKNAELRVSIFTEDGTFVTPPGDFLQGRVAMVKDFGPDAEQAVNGNTQAFS
Ga0210401_108752271	3300020583	Soil	MQRLALALLACTLVIGATGSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNANTQAAFSNYRIRF
Ga0210397_105407162	3300021403	Soil	MQGVGLALITCAVFIGATGSASAGGAQDEAAVRALGDNFAKAFVEKNAELRASLFAEDGTFVTPVGDFLQGRAKMVKDFGSEAQAVN
Ga0210387_105981932	3300021405	Soil	MKIKNKEVKISQTHQALRGLMQRLGLAFLACTLVIGAIGSASAGETRDEAAVRALGDTFAKAFVQKNAELRASIFTENGTFVTPVGDYLQGRTAMVKDFGSEAKAVN
Ga0210384_103053701	3300021432	Soil	MQRLGLTLLACTLVIGATGSASAGEAQDDAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDLLQGRVAMVKDFGPEAQQ
Ga0210384_109357012	3300021432	Soil	MQRLALALLACTLVIGATGSASAGEAQDEAAVRGLGDTFAKAFVQKNAELRASLFAENGTFVTPVGDFLQGRVAMVKDFGPEAQQAVNANTQAAFSNYRIRFIKPDVAVAD
Ga0210409_106282621	3300021559	Soil	MKIKNKEVKISQTHQALRGLIQRLGLAFLACTLVIGAIGSASAGETRDEAAVRALGDTFATAFVQKNAELRASLFSEDGTFVTPQGDFLQGRVAMVKDFGPEAQQAVNGTTQAAFSN
Ga0126371_100293467	3300021560	Tropical Forest Soil	MKTKEKVRISNTSALRGVMQRDGLAFLAGMLVIGATGSASAGQARDEASVRALGDTFAKAFIQKNPELRASLFAENGTFVTPVGDFLQGRVTMVKEFGSEAQAVN
Ga0126371_109727201	3300021560	Tropical Forest Soil	KSTPRGLMQRLGLAFLACTLFIGATGSASASEAQDEAAVRALGDNFAKAFVQKNAEQRASLFAENGTFVTPVGDFLQGGPQW
Ga0179589_100718411	3300024288	Vadose Zone Soil	MQRLGFALLACGLVIVATGSASAGEDREGAVRALGDTFANALVQKNAELRASIFAEDGTFVTPQGDYLQGRVAMLKDFGPEAQQAVNATT
Ga0137417_10516101	3300024330	Vadose Zone Soil	MPRLGLAFLAYTLVIGASGSASAGQARDEAAVRALGDTFAKTFVQKNAELRASIFTEDGTFVTPRGDFLQGRVAMVKDFGPEAEQAVNGNTQAAFSNYYRVRFIK
Ga0208990_11063492	3300027663	Forest Soil	MQRLGLAFLAYMLVIGASGSASAGQARDEAAVRALGDTFAKTFVQKNAELRASIFTEDGTFVTPRGDFLQGRVAMVKDFGP
Ga0170834_1008646571	3300031057	Forest Soil	MLVIGLTGSASAGQAQDEAAVRTLGDNFAKAFLQKNPEQRASLFTENGTFVTPQGDFMQGHVAMVKDFGTEAQAVTTSTQAAFSNYRIRFVKPDVAVADALLTLHNIN
Ga0318568_105845692	3300031819	Soil	IDSAPQKPKSALRSLIQRLGLAFLASTLVIGAAGSASAGEARDEVSVRALGDTFASAFVQKNAELGASLFAEDGTFVTPQGDFLQGRVAMVKDFGPEAQQAVNGST
Ga0306923_111092582	3300031910	Soil	MKHTLIATFAGLALLAAAGSASADEARNEAAIRALGDNFAKAFLQKKPDLRASLFVEDGTFVTPQGDFMQGHAAMVKDFGAEAQAVNDSTQAAFSNYRIRF
Ga0310913_111739681	3300031945	Soil	MQRFGSAFLACALVIGATGSASAGDARDEAAVRALGDNFAKAFIQKNAELRASLFAEDGTFVTPQGDFMQGHAAMVKDFGAEAQAVNDSTQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079261

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences