Metagenome / Metatranscriptome Family F079246

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079246
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	93 residues
Representative Sequence	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKA
Number of Associated Samples	97
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.70 %
% of genes near scaffold ends (potentially truncated)	95.69 %
% of genes from short scaffolds (< 2000 bps)	71.55 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.241 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.586 % of family members)
Environment Ontology (ENVO)	Unclassified (48.276 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.103 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.57% β-sheet: 0.00% Coil/Unstructured: 30.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02073	Peptidase_M29	9.48
PF13668	Ferritin_2	5.17
PF00490	ALAD	5.17
PF03631	Virul_fac_BrkB	4.31
PF01189	Methyltr_RsmB-F	2.59
PF03721	UDPG_MGDP_dh_N	1.72
PF08808	RES	1.72
PF00109	ketoacyl-synt	0.86
PF03544	TonB_C	0.86
PF03309	Pan_kinase	0.86
PF13650	Asp_protease_2	0.86
PF08194	DIM	0.86
PF10108	DNA_pol_B_exo2	0.86
PF02896	PEP-utilizers_C	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	9.48
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	5.17
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	4.31
COG0144	16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family	Translation, ribosomal structure and biogenesis [J]	2.59
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.72
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.72
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.72
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.72
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	1.72
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	1.72
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.86
COG1521	Pantothenate kinase type III	Coenzyme transport and metabolism [H]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.24 %
Unclassified	root	N/A	6.90 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.86 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	76.72 %
Unclassified	root	N/A	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.72 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	76.72 %
Unclassified	root	N/A	6.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.86 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.86 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	28.45 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	11.21 %
Unclassified	root	N/A	6.90 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %
Apicomplexa	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa	0.86 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.45 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	11.21 %
Unclassified	root	N/A	6.90 %
Hahellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae	0.86 %
Aconoidasida	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida	0.86 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.86 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.45 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	7.76 %
Unclassified	root	N/A	6.90 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	3.45 %
Hahella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella	0.86 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	0.86 %
Piroplasmida	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida	0.86 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.45 %
Unclassified	root	N/A	6.90 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	4.31 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	3.45 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	3.45 %
Hahella chejuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → Hahella chejuensis	0.86 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.86 %
Thermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus	0.86 %
Theileriidae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Theileriidae	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.45 %
Unclassified	root	N/A	6.90 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4.31 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	3.45 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	3.45 %
Thermus parvatiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus → Thermus parvatiensis	0.86 %
Theileria	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Theileriidae → Theileria	0.86 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.86 %
Hahella chejuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → Hahella chejuensis	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.45 %
Unclassified	root	N/A	6.90 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4.31 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	3.45 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	3.45 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.86 %
Theileria annulata	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Theileriidae → Theileria → Theileria annulata	0.86 %
Thermus parvatiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus → Thermus parvatiensis	0.86 %
Hahella chejuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → Hahella chejuensis	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402G3ESS	Not Available	505	Open in IMG/M
3300000953\|JGI11615J12901_10024962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	616	Open in IMG/M
3300000955\|JGI1027J12803_100646627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	589	Open in IMG/M
3300001138\|JGI12282J13277_10034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	817	Open in IMG/M
3300001431\|F14TB_100395651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1720	Open in IMG/M
3300002899\|JGIcombinedJ43975_10004930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2157	Open in IMG/M
3300002911\|JGI25390J43892_10002581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3914	Open in IMG/M
3300004479\|Ga0062595_101772028	Not Available	585	Open in IMG/M
3300005166\|Ga0066674_10016335	All Organisms → cellular organisms → Bacteria	3150	Open in IMG/M
3300005166\|Ga0066674_10275971	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300005172\|Ga0066683_10396911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	853	Open in IMG/M
3300005174\|Ga0066680_10260769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1103	Open in IMG/M
3300005179\|Ga0066684_10631893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	719	Open in IMG/M
3300005179\|Ga0066684_10780059	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005332\|Ga0066388_105389325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	648	Open in IMG/M
3300005439\|Ga0070711_100862802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300005446\|Ga0066686_10171017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1445	Open in IMG/M
3300005450\|Ga0066682_10834463	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005451\|Ga0066681_10119061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1527	Open in IMG/M
3300005467\|Ga0070706_101422943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	634	Open in IMG/M
3300005552\|Ga0066701_10344246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	924	Open in IMG/M
3300005556\|Ga0066707_10171050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1388	Open in IMG/M
3300005569\|Ga0066705_10431879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	825	Open in IMG/M
3300005574\|Ga0066694_10080280	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300005574\|Ga0066694_10478385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300005598\|Ga0066706_10400116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1093	Open in IMG/M
3300005713\|Ga0066905_101632262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → Hahella chejuensis	591	Open in IMG/M
3300005937\|Ga0081455_10719872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300006163\|Ga0070715_10918931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus → Thermus parvatiensis	540	Open in IMG/M
3300006791\|Ga0066653_10683315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300006796\|Ga0066665_10397415	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Theileriidae → Theileria → Theileria annulata	1136	Open in IMG/M
3300006796\|Ga0066665_10846614	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300007255\|Ga0099791_10301507	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	764	Open in IMG/M
3300010047\|Ga0126382_11618785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300010301\|Ga0134070_10058184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1308	Open in IMG/M
3300010303\|Ga0134082_10008425	All Organisms → cellular organisms → Bacteria	3687	Open in IMG/M
3300010322\|Ga0134084_10057405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1161	Open in IMG/M
3300010325\|Ga0134064_10014383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2178	Open in IMG/M
3300010333\|Ga0134080_10268524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	757	Open in IMG/M
3300010335\|Ga0134063_10016018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3032	Open in IMG/M
3300010336\|Ga0134071_10273630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	844	Open in IMG/M
3300010358\|Ga0126370_12622750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300010359\|Ga0126376_10344388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1318	Open in IMG/M
3300010361\|Ga0126378_11493137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	766	Open in IMG/M
3300010366\|Ga0126379_10641058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1152	Open in IMG/M
3300010376\|Ga0126381_101479928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	981	Open in IMG/M
3300010376\|Ga0126381_103720753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300010376\|Ga0126381_104285488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300010398\|Ga0126383_10203119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1905	Open in IMG/M
3300012198\|Ga0137364_10939317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300012198\|Ga0137364_11135326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300012198\|Ga0137364_11183238	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300012200\|Ga0137382_10007292	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5657	Open in IMG/M
3300012201\|Ga0137365_10048852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3210	Open in IMG/M
3300012205\|Ga0137362_11568914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300012206\|Ga0137380_10133409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2267	Open in IMG/M
3300012207\|Ga0137381_11466354	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300012211\|Ga0137377_10178142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2041	Open in IMG/M
3300012211\|Ga0137377_10695552	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300012285\|Ga0137370_10372959	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300012349\|Ga0137387_10012923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4974	Open in IMG/M
3300012351\|Ga0137386_10027071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3891	Open in IMG/M
3300012356\|Ga0137371_10075512	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2613	Open in IMG/M
3300012362\|Ga0137361_11745548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300012923\|Ga0137359_10303791	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300012930\|Ga0137407_10016850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5373	Open in IMG/M
3300012955\|Ga0164298_10036335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2261	Open in IMG/M
3300012972\|Ga0134077_10003170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4863	Open in IMG/M
3300012972\|Ga0134077_10040547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1689	Open in IMG/M
3300012975\|Ga0134110_10013228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3149	Open in IMG/M
3300012975\|Ga0134110_10266808	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300014166\|Ga0134079_10513211	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300014166\|Ga0134079_10584217	Not Available	553	Open in IMG/M
3300015264\|Ga0137403_10227403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1785	Open in IMG/M
3300015359\|Ga0134085_10020285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2530	Open in IMG/M
3300015359\|Ga0134085_10237269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	791	Open in IMG/M
3300016341\|Ga0182035_10933883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	766	Open in IMG/M
3300016357\|Ga0182032_10298095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1272	Open in IMG/M
3300017659\|Ga0134083_10014941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2669	Open in IMG/M
3300018431\|Ga0066655_11220412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	534	Open in IMG/M
3300018468\|Ga0066662_10618379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1017	Open in IMG/M
3300018468\|Ga0066662_12008334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300025905\|Ga0207685_10364100	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300025910\|Ga0207684_10648912	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	899	Open in IMG/M
3300025916\|Ga0207663_11222168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300026277\|Ga0209350_1012828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2667	Open in IMG/M
3300026298\|Ga0209236_1136193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1063	Open in IMG/M
3300026307\|Ga0209469_1005691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	5176	Open in IMG/M
3300026307\|Ga0209469_1046125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1391	Open in IMG/M
3300026310\|Ga0209239_1000215	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	32906	Open in IMG/M
3300026310\|Ga0209239_1011598	All Organisms → cellular organisms → Bacteria	4643	Open in IMG/M
3300026314\|Ga0209268_1007316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4682	Open in IMG/M
3300026314\|Ga0209268_1019011	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300026314\|Ga0209268_1110436	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300026342\|Ga0209057_1188483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300026343\|Ga0209159_1029387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2956	Open in IMG/M
3300026475\|Ga0257147_1080534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	504	Open in IMG/M
3300026537\|Ga0209157_1008971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	6904	Open in IMG/M
3300026538\|Ga0209056_10023811	All Organisms → cellular organisms → Bacteria	5922	Open in IMG/M
3300026540\|Ga0209376_1016957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4996	Open in IMG/M
3300026547\|Ga0209156_10000583	All Organisms → cellular organisms → Bacteria	31088	Open in IMG/M
3300026548\|Ga0209161_10136789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1430	Open in IMG/M
3300027018\|Ga0208475_1007607	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1064	Open in IMG/M
3300030844\|Ga0075377_11552173	Not Available	550	Open in IMG/M
3300030916\|Ga0075386_12069573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	878	Open in IMG/M
3300030935\|Ga0075401_11697420	Not Available	760	Open in IMG/M
3300030967\|Ga0075399_11299145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	971	Open in IMG/M
3300030974\|Ga0075371_11694430	Not Available	626	Open in IMG/M
3300031446\|Ga0170820_11990918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2954	Open in IMG/M
3300031474\|Ga0170818_100758576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1158	Open in IMG/M
3300031720\|Ga0307469_11228790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300031942\|Ga0310916_10780389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	806	Open in IMG/M
3300032180\|Ga0307471_101604801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	806	Open in IMG/M
3300033412\|Ga0310810_10949638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	745	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.14%
Host-Associated	Host-Associated	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.14%
Plants	Host-Associated → Plants	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.66%
Loam	Environmental → Terrestrial → Soil → Loam	9.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001138	Grasslands soil microbial communities from Kansas, USA that are Nitrogen fertilized - NN591	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_08293790	2189573004	Grass Soil	LVLSFLFLMIAAIFGLLRSYRVDVLRADVANANAARDAAEHRRVTQETELKTAKMAVAGEEAKIAEAENSAKAGAE
JGI11615J12901_100249621	3300000953	Soil	MLRPKSTISAVTSKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDLAENRRVTQETEVKTRETAVAGAEAKIAEAEN
JGI1027J12803_1006466271	3300000955	Soil	MLRPKSTISAVTSKIILLLLSHLFLVSAAIFGLVGSYRVDVIRTDLANANAARDAAELRRVTQETEVKTRETAVAGAEAKIAEAENKATKAQT
JGI12282J13277_100341	3300001138	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTLQNEKAELQSKLEGSRNEIAALQKRVGEAG
F14TB_1003956513	3300001431	Soil	MLGPQSTISGVTSNIILLVLSGLLLLSAAIYGLVGSYRVDVLRTDLANANAARDAVEHREAELKTREATVAGAEAKIAEAENKATKAQTELLKLQNEKAE
JGIcombinedJ43975_100049301	3300002899	Soil	MKIILLLLSYLFLVSAAVFGLVGSYRVDVLRKDLANAIAVRDAAELRRVTQETELKACETAVAGTEAKIA
JGI25390J43892_100025814	3300002911	Grasslands Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAE
Ga0062595_1017720282	3300004479	Soil	MLRPKSTISAVMRKIILVLAFLCLMIAAIVGLVGTYQVDVLRKDLANANAARDAAEHRRVTQETELKTRETAVAGAEAKIAEAENKATKAQT
Ga0066674_100163354	3300005166	Soil	MLRPKSTVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDALRTDLAKANAARDAAEHRETELKTRETAVAGAEAKIAEAENKAKKAQTELLTLQSEKAELERELDASRNEI
Ga0066674_102759713	3300005166	Soil	MLRPESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTELAKANAARDAAEHRETEFKTREAAVAGAEAKIA
Ga0066683_103969112	3300005172	Soil	MLRAKSTISAVTSKIILLLVSCLCLLSAAIFGLVGSYRVDVLHADLANANTARDAAEHRRVTQERELKTRETAVAGAEAK
Ga0066680_102607692	3300005174	Soil	MPRPKSTISAVTPKIILVLAFLCLMIPAIFGLLGSYRVDALRADVANANAARDAAEHRRMTQEAELKTRETAVAGEEAKIAEAQNKATK
Ga0066684_106318931	3300005179	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQ
Ga0066684_107800591	3300005179	Soil	MFHLGSRISAITPRIILVLSFLFLMIAAIFGLHSSYRVDVLRADVTKANAARDAAEQRRVTQERELKTREMAVAGGEAKIAEAENRTATAGAELA
Ga0066388_1053893252	3300005332	Tropical Forest Soil	MLGPKSTIAATPKIIVLVLSCLCLLSAAIFGLVGSYRVDVLRTDLANANAARDAVEHREAELKTREATVAGAEAKIAEA
Ga0070711_1008628021	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKITLLLLSYLFLVSAAVFGLVGSYRVDVLRKDLANAIGARDAAELRRVTQETELKVCETAVAGTEAKIAEAENKATKAQTELLKL
Ga0066686_101710172	3300005446	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENK
Ga0066682_108344632	3300005450	Soil	MVRPRSRISAVTPRIILVLSFLFLMIAAIFGLLRSYRMDVLRADVANANAARDAAEHRRVTQETELKTREMAVAGEEAKIAEAENKAAKARAELAQLQKEKTELQTKL
Ga0066681_101190611	3300005451	Soil	MLRPESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTELAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQ
Ga0070706_1014229432	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLGPKSTIAATPKIIVLVLSCLCLLSAAIFGLVGSYRVDVLRTDLANANAARDAVEHREAELKTREVTVAGAEAKIAEAEN
Ga0066701_103442461	3300005552	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTLQNEKAELESKLEGSRNEIAALQKRVG
Ga0066707_101710501	3300005556	Soil	MLRPESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTELAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKAT
Ga0066705_104318791	3300005569	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEA
Ga0066694_100802803	3300005574	Soil	MLRAKSTISAVTPKIILLLLSCLFLVSAAIFGLVGSYRVDVLRTDLANAIAARDVAERRRVTQETELKTRETAVAG
Ga0066694_104783851	3300005574	Soil	MLRPKSTISAVMRKIILVLAFLCLMIAAIVGLVGTYQVDVLRKDLANANAARDAAEHRRVTQETELKTRETAVAGAEAKIAEAENK
Ga0066706_104001162	3300005598	Soil	MLRPKSTISAVTSKIILLLLSCLCLLSAAIFGLVGSYRVDVLRADLANANMARDAAEHRRVTQERELKTRETAVAGAEAKIAEAENKATKAQTELLKL
Ga0066905_1016322621	3300005713	Tropical Forest Soil	MLRPKCTISAVTSRSILLVLSFLLFVGAAIFGLVGSYRVDVLRSDLSNANAARDAAEHRETELKTREAAVAGAEAKIAEAENK
Ga0081455_107198721	3300005937	Tabebuia Heterophylla Rhizosphere	MLGPQSTISGVTSKIIVLVLSGLLLLSAAIFGLVGSYRVDVLRTDLANANAARDAVEHREAELKTREATVAGAEAKIAEAEDKATKAQTELLKLQNEK
Ga0070715_109189311	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MLGPQSTISGVTSNIILLVLSGLLLLSAAIYGLVGSYRVDVLRTDLANANAARDAVEHREAELKTREATVAAAEAKIAEAEDKATKAQMELLKLQNEKAELESKLDALQKQI
Ga0066653_106833152	3300006791	Soil	MLRAKSTISAVTPKIILLLLSCLFLVSAAIFGLVGSYRVDVLRTDLANAIAARDVAERRRVTQETDLKTRETAVAGVE
Ga0066665_103974151	3300006796	Soil	MLRAKSTISAVTSKIILLLVSCLCLLSAAIFGLVGSYRVDVLHADLANANTARDAAEHRRVTQERELKTRETAVAGAEAKIAEAENKATKAQTELLK
Ga0066665_108466142	3300006796	Soil	MVRPRSRISAVTPRIILVLSFLFLMIAAIFGLLRSYRMDVLRADVANANAARDAAEHRRVTQETELKTRETAVAGEEAKIAEAENKAAKAGAELAQLQ
Ga0099791_103015072	3300007255	Vadose Zone Soil	MFRPKSTVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETELKTREAAVAGAEAKIAEAENKSTKAQTELLTL
Ga0126382_116187851	3300010047	Tropical Forest Soil	MKIILLPFSYLFLVSAAVFGLVGSYRVDVLRKDLANAIAARDAAELRRVTQETELKVCETAVAGTEAKIAEAENKATKAQTELLKLQNEKAELESKLDAS
Ga0134070_100581841	3300010301	Grasslands Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAV
Ga0134082_100084256	3300010303	Grasslands Soil	MLRPESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENK
Ga0134084_100574052	3300010322	Grasslands Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTELAKANAARDAAEHRETEFKTREAAVAGAE
Ga0134084_101189251	3300010322	Grasslands Soil	MLRPKSTTSAATSKVIVVLAFLCLMIAAIFGLVGSYKVDALRTEVASANAARDAAEHRRATQETELKARETAVAGEEAKIAEAEN
Ga0134064_100143833	3300010325	Grasslands Soil	MLRPKSRVSAGTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENK
Ga0134080_102685241	3300010333	Grasslands Soil	MFRPKSTVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTELAKANAARDAAEHRETEFKTREAAVAGAEAKIAEA
Ga0134063_100160186	3300010335	Grasslands Soil	MLRPESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQT
Ga0134071_102736303	3300010336	Grasslands Soil	MLRAKSTISAVTPKIILLLLSCLFLVSAAIFGLVGSYRVDVLRTDLANAIAARDVAERRRVTQETELKTRETAVAGAEAKIAEAENKATKAQTELLKL
Ga0126370_126227501	3300010358	Tropical Forest Soil	MLGPQSTISGVTSKIILLVLSGLLLLSAAIFGLVGSYRVDVLRTDLANANAARDAVEHREAELKTREATVAGAEAKIAEAENKATNAQTKLLKLQNEKAELESKLDASRNEIASPQKQIG
Ga0126376_103443882	3300010359	Tropical Forest Soil	MLRPKSTISAVTPKIILLLLSYLFLVSAAVFGLVGSYRVDVVRKDLANAIAVRDAAELRRVTQETELKVCETAVAGTEA
Ga0126378_114931372	3300010361	Tropical Forest Soil	MLRPKSTISAVTSKSILLVLSCLFFVGAAIFGLVGSYRVDVLRTDLANANAARDAVEHRETELKTREAAVAGAEAKIAEAENKATQAQTELLKLQN
Ga0126379_106410583	3300010366	Tropical Forest Soil	MKIILLLLSYLFFVSAAVFGLVGSYRVDVLRKNLANAIAARDATELRRVTQETELKVCETAVAGTEAKIAEAENKA
Ga0126381_1014799282	3300010376	Tropical Forest Soil	MLRSKSTISAVTSKSILLVLSCLFFVGAAVFGLVGSYRVDVLRTDLASANAARDAVEHRETELKTREAAVAGAEAKIAEAENKATQAQTELLKL
Ga0126381_1037207531	3300010376	Tropical Forest Soil	MLRPKSTISAVTSRSILLVVAFLFFVGAAIFGLVGSYRVDVLRTDLASANTARDAAEHRETELKTREAAVAGAEAKIAEAENKATQAQTELLK
Ga0126381_1042854882	3300010376	Tropical Forest Soil	MLRPKSAISAVTPKIILLVLSCLFLVSAAIFGLTRSYRVDVLRADLGNAIAARDAAELRRVTQETELKVCETAVAGT
Ga0126383_102031191	3300010398	Tropical Forest Soil	MLRPKSTISAVTSRSILLVLSFLFFVGAAIFGLVGSYRVDVLRTDLANANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATQAQTELLKLQNEKTEL
Ga0137364_109393172	3300012198	Vadose Zone Soil	MLHLGSRTSAVTPRIILVLSFLFLMIAAIFGLHSSYRVDALRADVAKANAARDGAEHRRVTQETELKTREMAVAGEEAKIAEAENKAAKVGAELAQLQKEK
Ga0137364_111353262	3300012198	Vadose Zone Soil	MVRPRSRISAVTPRIILVLSFLFLMIAAIFGLLRSYRMDVLRADVANANAARDAAEHRRVTQETELKTREMAVAGEEAKIAEAENKAAKVGAELAQLQKE
Ga0137364_111832382	3300012198	Vadose Zone Soil	MLRAKSTISAVTPKIILLLLSCLFLVSAAIFGLVGSYRVDVLRTDLANAIAARDVAERRRVTQETELKTRETAVAGAEAKIAEAENKATKAQ
Ga0137382_100072926	3300012200	Vadose Zone Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQT
Ga0137365_100488525	3300012201	Vadose Zone Soil	MLRAKSTISAVTPKIILLLLSCLFLVSAAIFGLVGSYRVDVLRTDLANAIAARDVAERRRVTQETELKTRETAVAGAEAKIAEAENKATKAQTELLKLQNEKAELESKL
Ga0137362_115689142	3300012205	Vadose Zone Soil	MLHLGSRISAITPRIILVLSFLFLMIAAIFGLHSSYRVDVLRADVAKANAARDATEHQRVTQEGELKTREMAVAGEEAKIAEA
Ga0137380_101334092	3300012206	Vadose Zone Soil	MLRPKSTISAVMRKIILVLAFLCLMIAAIVGLVGTYQVDVLRIDLANANAARDAAEHRRVTQETELKTRETAVAGAEAKIAEAENKATKAQTDLLKLQN*
Ga0137381_114663542	3300012207	Vadose Zone Soil	MLHPGSRISAVTPKIIVALAFLCLMIAAIFGLLGSYRVDALRVDAAKANAARDAAEHRRVTQERELKTRETAVAGEEAKIAEAQNKAAKAGAELAQS
Ga0137377_101781421	3300012211	Vadose Zone Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLARANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTLQNEKA
Ga0137377_106955521	3300012211	Vadose Zone Soil	MLRPKSTISAVMRKIILVLAFLCLMIAAIVGLVGTYQVDVLRIDLANANAARDAAEHRRVTQETELKTRETAVAGAEAKIAEAENKATKAQTDLLKLQNEKAE
Ga0137370_103729593	3300012285	Vadose Zone Soil	MLRAKSTISAVTPKIILLLLSCLFLVSAAIFGLVGSYRVDVLRTDLANAIAARDVAERRRVTQETDLKTRETAVAGA
Ga0137387_100129231	3300012349	Vadose Zone Soil	MLRAKSTISAVTPKIILLLLSCLFLVSAAIFGLVGSYRVDVLRTDLANAIAARDVAERRRVTQETELKPRETAVAGAEAKIAEAENKATKAQTELLKLQNEKAELESKL
Ga0137386_100270711	3300012351	Vadose Zone Soil	MLRPKSTISAVTSKIILLLVSCLCLLSAAIFGLVGSYRVDVLRADLANANTARDAAEHRRVTQERELKTREPAVAGAEAKIAEAENKATKAQTELLKLQNEKAELQSKL
Ga0137371_100755121	3300012356	Vadose Zone Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTLQNEKA
Ga0137361_117455482	3300012362	Vadose Zone Soil	MLHLGSRTSAVTPRIILVLSFLFLMIAAIFGLHSSYRVDALRADVAKANAARDGAEHRRVTQETELKTREMAVAGEEAKIAEAEN
Ga0137359_103037911	3300012923	Vadose Zone Soil	MFRPKSTVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETELKTREAAV
Ga0137407_100168505	3300012930	Vadose Zone Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKTTKAQTELLTLQNEKAELESKLEASRNEIAALQKRSGEAG
Ga0164298_100363354	3300012955	Soil	MLGPQSTISGVTSNIILLVLSGLLLLSAAIYGLVGSYRVDVLRTDLANANAARDAVEHRETELKTREATVAAAEAKIAEAEDKATKAQMELLKLQNEKAE
Ga0134077_100031705	3300012972	Grasslands Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENK
Ga0134077_100405474	3300012972	Grasslands Soil	MLRSESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENK
Ga0134110_100132285	3300012975	Grasslands Soil	MFHLGSRISAITPRIILVLSFLFLMIAAIFGLHSSYRVDVLRADVTKANAARDAAEQRRVTQERELKTREMAVAGGEAKIAEAENRTATAGAELARSQKEKTE
Ga0134110_102668082	3300012975	Grasslands Soil	MLRPKSTISAVTPRKILLLLSCLFLVSAAVFGVVGSYKVDVLRKDLANAIAARDAAELRRVTQETELKTRETAVAGAEAKIAEAENKATKAQTELLKLQSEKADL
Ga0134079_105132111	3300014166	Grasslands Soil	MFHLGSKISAVTPRIILVLSFLFLMIAAIFGLHSSYRVDVLRADVTKANAARDAAEQRRVTQERELKTREIAVAGGEAKIAE
Ga0134079_105842171	3300014166	Grasslands Soil	MPRPKSTISAVTPKIILVLAFLCLMIPAIFGLLGSYRVDALRADVANANAARDAAEQRRMTQEAELKTRETAVAGEEAKIAEAQNKATKAGAEL
Ga0137403_102274031	3300015264	Vadose Zone Soil	MFRPKSTVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETELKTREAAVAG
Ga0134085_100202854	3300015359	Grasslands Soil	MLRPKSRVSAGTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENK
Ga0134085_102372693	3300015359	Grasslands Soil	MLRAKSTISAVTPKIILLLLSCLFLVSAAIFGLVGSYRVDVLRTDLANAIAARDVAERRRVTQETELKTRETAVAGAEAKIAEAENKATKAQTELLKLQNEKAELESKLNASRNEI
Ga0182035_109338831	3300016341	Soil	MLGPKSTIAATPKIILLVLSCLCLLSAAIFGLVGSYRVDVLRTDLANANAARDVVEHREAELKTREATVAGAEAKIAEAENKATKAQTELLKLQNEKAELESKLD
Ga0182032_102980951	3300016357	Soil	MLRPKSTISAVTSRSILLVLSFLLFVGAAIFGLVGSYRVDVLRTDLANANAARDAAEHRETELKTREAAVAGAEAKIAEAENKATQAQTELLKLQNEKTELESKLDALRQQIGEA
Ga0134083_100149411	3300017659	Grasslands Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTL
Ga0066655_112204121	3300018431	Grasslands Soil	MLRPKSTVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDALRTDLAKANAARDAAEHRETELKTRETAVAGAEAKIAEAENKAKKAQTELLTLQSEKAELERELDASRNELAAL
Ga0066662_106183791	3300018468	Grasslands Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTLQNEKAELESKLEASRNEI
Ga0066662_120083341	3300018468	Grasslands Soil	MLRAKSTISAVTPKIILLLLSCLFLVSAAIFGLVGSYRVDVLRTDLANAIAARDVAERRRVTQETELKPRETAVAGAEAKIAEAENKATKAQTELLKLQNEKAELG
Ga0207685_103641001	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKITLLLLSYLFLVSAAVFGLVGSYRVDVLRKDLANAIGARDAAELRRVTQETELKVCETAVAGTEAKIAEAENKATKAQTELLKLQNEKAELES
Ga0207684_106489121	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLGPKSTIAATPKIIVLVLSCLCLLSAAIFGLVGSYRVDVLRTDLANANAARDAVEHREAELKTREVTVAGAEAKIAEAENKATKA
Ga0207663_112221681	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKITLLLLSYLFLVSAAVFGLVGSYRVDVLRKDLANAIGARDAAELRRVTQETELKVCETAVAGTEAKIAEAENKATKAQTELLKLQTVS
Ga0209350_10128285	3300026277	Grasslands Soil	MLRPESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTELAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAEN
Ga0209236_11361932	3300026298	Grasslands Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGA
Ga0209469_10056911	3300026307	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTLQNEKAALESKLEASRNEIAALQKRIGEAG
Ga0209469_10461251	3300026307	Soil	MLRPKSTISAVMTKIILVIAFLCLMIAAIVGLVGTYQVDVLRKDLANANAARDAAEHRRVTQETELKTRETAVAGAEAKIAEAENKATKAQTDLLKLQNEKAELENKLDASR
Ga0209239_10002151	3300026310	Grasslands Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTLQNEKAELESKLEG
Ga0209239_10115986	3300026310	Grasslands Soil	MLRPESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTLQNEKAELESKL
Ga0209268_10073161	3300026314	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTGEAAVAGAEAKIAEAENKATKAQTELLTLQ
Ga0209268_10190114	3300026314	Soil	MLRPKSTVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDALRTDLAKANAARDAAEHRETELKTRETAVAGAEAKIAEAENKAKKAQTELLTLQ
Ga0209268_11104362	3300026314	Soil	MLRPKSTISAVTPRKILLLLSCLFLVSAAVFGVVGSYKVDVLRKDLANAIAARDAAELRRVTQETELKTRETAVAGAEAKIA
Ga0209057_11884831	3300026342	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAETKIAEAENKATKAQTELLTLQK
Ga0209159_10293871	3300026343	Soil	MLRPESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTELAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTEL
Ga0257147_10805341	3300026475	Soil	MLGSKSTISAVTSHIILLVLSGLLLLSAAIYGLVGSYRVDVLRTDLANANAARDAVEHREAELKTREATVAAAEAKIAEAEDKATKAQTELLKLQNEKAELESKFDTLQKQI
Ga0209157_10089716	3300026537	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKVNAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTEL
Ga0209056_100238111	3300026538	Soil	MLRPESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTELAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKA
Ga0209376_10169571	3300026540	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKA
Ga0209156_100005831	3300026547	Soil	MLRPESRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTELAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENK
Ga0209161_101367891	3300026548	Soil	MLRPKSRVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTLQNEKAALESKLEGS
Ga0208475_10076071	3300027018	Soil	MFRPKSTVSAVTPKIILLLLSYLFLVGAAIFGLIGSYRVDVLRTDLAKANAARDAAEHRETEFKTREAAVAGAEAKIAEAENKATKAQTELLTLQNEKAELESKLEGSRNEIAALQKRIR
Ga0307312_100210367	3300028828	Soil	LVLSFLFLMIAAIFGLFSSYRVDALRADVAKANAARDAAEHRRVTQEGELKTREMAVTGEEAKIAEAENKAAKVGAELAQLQKEKTELQTQL
Ga0075377_115521731	3300030844	Soil	MIGPSSRLSAVAPRVILVLSFLFLMIAAIFGLLRSYRVDVLRADVANANAARDAAEHRRVTQETELKTREMAVAGEEAKIAEAENKAAKVGAELAQLQKEKTELQTKLE
Ga0075386_120695732	3300030916	Soil	MIGPSSRLSAVAPRVILVLSFLFLMIAAIFGLLRSYRVDVLRADVANANAARDAAEHRRVTQETELKTREMAVAGEEAKIAEAENKAAKVGAELAQLQKEK
Ga0075401_116974201	3300030935	Soil	MIGPSSRLSAVSPRVILVLSFLFLMIAAIFGLLRSYRVDVLRADVANANAARDAAEHRRVTQETELKTREMAVAGEEAKIAEAENKAAKAGAELAQLQKEKNGTAEFSDFCAI
Ga0075399_112991452	3300030967	Soil	MIGPSSRLSAVAPRVILVLSFLFLMIAAIFGLLRSYRVDVLRADVANANAARDAAEHRRVTQETELKTREMAVAGEEAKIAEAENKA
Ga0075371_116944301	3300030974	Soil	MIGAGSRHSAVAPRVILVLSFLFLMIAAIFGLLRSYRVDVLRADVANANAARDAAEHRRVTQETELKTREMAVAGEEAKIAEAENKAAKAGAELAQLQKEKKHR
Ga0170820_119909185	3300031446	Forest Soil	MLGPKSTISAVTSHIILLVLSGLLLLSAAIYGLVGSYRVDVLRTDLANANAARDAVEHREAELKTREATVAAAEAKIAEAENKAT
Ga0170818_1007585763	3300031474	Forest Soil	MLGPKSTISAVTSHIILLVLSGLLLLSAAIYGLVGSYRVDVLRTDLANANAARDAVEHREAELKTREATVAAAE
Ga0307469_112287901	3300031720	Hardwood Forest Soil	MFRPKSTVSAVTPKIILLLLSYLFLVSAAIFGLVGSYRVDVLRTDLAKANAARDAAEHRETELKTREAAVAGAEAKIAEAENKATKAQTELLTL
Ga0310916_107803891	3300031942	Soil	MLRPKSTISAVTSRSILLVLSFLLFAGAAIFGLVGSYRVDVLRTDLANANAARDAAEHRETELKTREAAVAGAEAKIAEAENKATQ
Ga0307471_1016048011	3300032180	Hardwood Forest Soil	MLGPQSTISGVTSNIILLVLSGLLLLSAAIYGLVGSYRVDVLRTDLANANAARDAVERREAELKTREATVAAAEAKIAEAEDKATKAQTELLKLQNEKAELESKLDALQKQIGE
Ga0310810_109496381	3300033412	Soil	MGPKSTISAVTPKIIFLVLSCLFLVSAAIFGLVGSYRVDVLRRDLVNAIAARDAAELRRVTQETELKTRETAVAGAEAKIAEAENKATNAQTELLKLQNEKAELEKKLDASRNE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079246

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences