Metagenome / Metatranscriptome Family F079238

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079238
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	75 residues
Representative Sequence	VSPPAPRRRWARAGNVLLVVLVTALQLAGLRAGSSVRAPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAVCVAA
Number of Associated Samples	98
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.53 %
% of genes near scaffold ends (potentially truncated)	69.83 %
% of genes from short scaffolds (< 2000 bps)	66.38 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.793 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (38.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.966 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 61.68% β-sheet: 0.00% Coil/Unstructured: 38.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02687	FtsX	6.03
PF13602	ADH_zinc_N_2	6.03
PF07730	HisKA_3	1.72
PF13489	Methyltransf_23	1.72
PF01810	LysE	1.72
PF01548	DEDD_Tnp_IS110	0.86
PF02861	Clp_N	0.86
PF13676	TIR_2	0.86
PF09990	DUF2231	0.86
PF03795	YCII	0.86
PF02371	Transposase_20	0.86
PF13474	SnoaL_3	0.86
PF01740	STAS	0.86
PF12680	SnoaL_2	0.86
PF03050	DDE_Tnp_IS66	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.72
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.72
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.72
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.72
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.72
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
All Organisms	root	All Organisms	36.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
cellular organisms	root	All Organisms → cellular organisms	36.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.86 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.86 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.31 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.31 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.72 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.86 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.86 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.86 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.86 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.31 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.86 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.86 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.31 %
Sediminihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Sediminihabitans	0.86 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.86 %
Anaerolinea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea	0.86 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.86 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.86 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.31 %
unclassified Microbacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium	0.86 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.86 %
Sediminihabitans luteus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Sediminihabitans → Sediminihabitans luteus	0.86 %
Candidatus Blastococcus massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Candidatus Blastococcus massiliensis	0.86 %
Actinomadura namibiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura namibiensis	0.86 %
Anaerolinea thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	0.86 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.31 %
Streptomyces sp. CNH099	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH099	0.86 %
Microbacterium sp. B19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. B19	0.86 %
Sediminihabitans luteus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Sediminihabitans → Sediminihabitans luteus	0.86 %
Candidatus Blastococcus massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Candidatus Blastococcus massiliensis	0.86 %
Actinomadura namibiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura namibiensis	0.86 %
Anaerolinea thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	0.86 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005344\|Ga0070661_101865830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Candidatus Blastococcus massiliensis	511	Open in IMG/M
3300005435\|Ga0070714_101091268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	778	Open in IMG/M
3300005436\|Ga0070713_100227707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1693	Open in IMG/M
3300005436\|Ga0070713_101668633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. B19	619	Open in IMG/M
3300005437\|Ga0070710_10239595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1161	Open in IMG/M
3300005437\|Ga0070710_11243984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	552	Open in IMG/M
3300005437\|Ga0070710_11358573	Not Available	530	Open in IMG/M
3300005439\|Ga0070711_100764174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300005444\|Ga0070694_100603639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	884	Open in IMG/M
3300005457\|Ga0070662_101129813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	673	Open in IMG/M
3300005467\|Ga0070706_100960391	Not Available	789	Open in IMG/M
3300005468\|Ga0070707_100482154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1202	Open in IMG/M
3300005471\|Ga0070698_101035201	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005471\|Ga0070698_101232494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300005518\|Ga0070699_102172100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNH099	507	Open in IMG/M
3300005555\|Ga0066692_10531274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	746	Open in IMG/M
3300005558\|Ga0066698_10344740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1030	Open in IMG/M
3300005564\|Ga0070664_100862725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	848	Open in IMG/M
3300006028\|Ga0070717_11402743	Not Available	634	Open in IMG/M
3300006175\|Ga0070712_100069900	All Organisms → cellular organisms → Bacteria	2506	Open in IMG/M
3300006175\|Ga0070712_100234698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1458	Open in IMG/M
3300006175\|Ga0070712_100354631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1201	Open in IMG/M
3300006755\|Ga0079222_11085436	Not Available	701	Open in IMG/M
3300006806\|Ga0079220_11907520	Not Available	527	Open in IMG/M
3300006806\|Ga0079220_12135868	Not Available	502	Open in IMG/M
3300006854\|Ga0075425_100818703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1067	Open in IMG/M
3300006914\|Ga0075436_100758870	Not Available	721	Open in IMG/M
3300007076\|Ga0075435_100114161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2249	Open in IMG/M
3300009090\|Ga0099827_11106465	Not Available	688	Open in IMG/M
3300009090\|Ga0099827_11539627	Not Available	579	Open in IMG/M
3300009101\|Ga0105247_10692768	Not Available	766	Open in IMG/M
3300009143\|Ga0099792_10882355	Not Available	591	Open in IMG/M
3300009177\|Ga0105248_11588042	Not Available	741	Open in IMG/M
3300009553\|Ga0105249_13572784	Not Available	501	Open in IMG/M
3300010333\|Ga0134080_10545383	Not Available	557	Open in IMG/M
3300010337\|Ga0134062_10174325	Not Available	968	Open in IMG/M
3300010366\|Ga0126379_10846929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1015	Open in IMG/M
3300010371\|Ga0134125_10161498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2497	Open in IMG/M
3300010371\|Ga0134125_10456489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1416	Open in IMG/M
3300010375\|Ga0105239_12015438	Not Available	670	Open in IMG/M
3300010396\|Ga0134126_10412457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1567	Open in IMG/M
3300010397\|Ga0134124_12490137	Not Available	559	Open in IMG/M
3300010403\|Ga0134123_11746110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300011107\|Ga0151490_1084600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300012199\|Ga0137383_10017633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4906	Open in IMG/M
3300012201\|Ga0137365_10990189	Not Available	610	Open in IMG/M
3300012203\|Ga0137399_10479087	Not Available	1043	Open in IMG/M
3300012204\|Ga0137374_10352102	Not Available	1187	Open in IMG/M
3300012205\|Ga0137362_10896212	Not Available	758	Open in IMG/M
3300012206\|Ga0137380_10413614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1196	Open in IMG/M
3300012206\|Ga0137380_11665940	Not Available	522	Open in IMG/M
3300012208\|Ga0137376_10582649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	968	Open in IMG/M
3300012209\|Ga0137379_10223264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1798	Open in IMG/M
3300012210\|Ga0137378_10108115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2560	Open in IMG/M
3300012211\|Ga0137377_11164170	Not Available	701	Open in IMG/M
3300012349\|Ga0137387_10281141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202	Open in IMG/M
3300012353\|Ga0137367_10083792	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300012363\|Ga0137390_10031071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	5087	Open in IMG/M
3300012532\|Ga0137373_10306082	Not Available	1262	Open in IMG/M
3300012923\|Ga0137359_10394706	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1227	Open in IMG/M
3300012924\|Ga0137413_11025584	Not Available	648	Open in IMG/M
3300012960\|Ga0164301_10086396	Not Available	1754	Open in IMG/M
3300012971\|Ga0126369_12530112	Not Available	598	Open in IMG/M
3300012986\|Ga0164304_10478114	Not Available	904	Open in IMG/M
3300014326\|Ga0157380_12542112	Not Available	578	Open in IMG/M
3300014968\|Ga0157379_11457045	Not Available	665	Open in IMG/M
3300014969\|Ga0157376_11175007	Not Available	795	Open in IMG/M
3300018482\|Ga0066669_10851666	Not Available	811	Open in IMG/M
3300020581\|Ga0210399_11452701	Not Available	534	Open in IMG/M
3300021178\|Ga0210408_11012919	Not Available	642	Open in IMG/M
3300021479\|Ga0210410_10145654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Sediminihabitans → Sediminihabitans luteus	2110	Open in IMG/M
3300021559\|Ga0210409_10509948	Not Available	1067	Open in IMG/M
3300025900\|Ga0207710_10615285	Not Available	568	Open in IMG/M
3300025915\|Ga0207693_10438981	Not Available	1020	Open in IMG/M
3300025928\|Ga0207700_11528131	Not Available	592	Open in IMG/M
3300025939\|Ga0207665_10205248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura namibiensis	1437	Open in IMG/M
3300025941\|Ga0207711_11314366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300026035\|Ga0207703_11849521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300026078\|Ga0207702_10982943	Not Available	837	Open in IMG/M
3300026277\|Ga0209350_1081956	Not Available	862	Open in IMG/M
3300028146\|Ga0247682_1109489	Not Available	518	Open in IMG/M
3300028379\|Ga0268266_10729142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300028715\|Ga0307313_10115813	Not Available	819	Open in IMG/M
3300032174\|Ga0307470_10578809	Not Available	835	Open in IMG/M
3300034817\|Ga0373948_0041137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	967	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.72%
Host-Associated	Host-Associated	23.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.72%
Plants	Host-Associated → Plants	23.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.41%
Loam	Environmental → Terrestrial → Soil → Loam	29.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	29.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.59%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	25.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01680730	2199352025	Soil	VSQPAPRRRWARAGNVLLVVLVTALQLAAPRAGSPARASDLLAGAASETVGMRPR
Ga0066674_101247401	3300005166	Soil	VSQPAPRRRWARAGNVLLVVLVTALQLAAPRAGSPARPAEVLAGVAGETMGMAAALIGGVALWWR
Ga0070676_113760702	3300005328	Miscanthus Rhizosphere	VSQPALRRRWARAGNVLLVVLVTALQLAGLRSGSPARTAEVLAGVAGETMGVAAALIGGVALWWRRSRPV
Ga0070680_1000748064	3300005336	Corn Rhizosphere	VSQPAPRRRWARAGSVLLVVLVTALQLAGLRAGSPARASGWLGGVASQAVGVAAALIGGVALWWRRSRPV
Ga0070661_1018658301	3300005344	Corn Rhizosphere	VSPPAPRRRWARAGNVLLVVLVTALQLAGPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRSRPVSVLAVCVAAYAVNAV
Ga0070703_101464482	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VSQPAPRRRWARAGSVLLVVLVTALQLAGLRAGSPARASGWLAGVAGEVLGVAAALIGGVALWWRRSRPV
Ga0070714_1000897297	3300005435	Agricultural Soil	VSPPAPRRRWARAGNVLLVVLVTALQLASPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRSR
Ga0070714_1010912681	3300005435	Agricultural Soil	VSPGLRRGWPGVRDVLLVVSVAGLQLAGPRAGSPAEPPELLAGLTGEVLGTAAALIPGVALLWRRSWPNGVLAVCVAAYAVNVAVVPGVPPVAGWV
Ga0070713_1001269071	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSQSAPRRRWARAGNVLLVVLVTALQLAGPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRS
Ga0070713_1002277073	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSQAAPRGGRARAGNVLLVVLVTALQVAAPRSGSPGHVPDLLAGLAGTALGTAAALIQGVALLWRRSRPVGVLEVCVAGYTANA
Ga0070713_1016686331	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSQLAPRRRWARAGNVLLVVLVTALQLVGLRSVRAPDLLAGVAGEVLGVATALIGGVALLWRRSRPVSVLAVCVAAYAVNAVMVPGVPPYTGWLAL
Ga0070710_100867481	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSPPAPRRRWARAGNVLLVVLVTALQLAGPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWR
Ga0070710_102395952	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSQPAPRWRWARAGNVLLVVLVTALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAVCV
Ga0070710_112439841	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSQPAPRRRWVRAGNVLLVVLVTALQLVGPRAMSLVRAPEVLAGVASQALGVAAALIGGVALLWRRSRPVSVLAICE
Ga0070710_113585731	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSQAAPRGGRARAGNVLLVVLVTALQVAAPRSGSPGHVPDLLAGLAGTALGTAAALIQGVALLWRRSRPVGVLEVCVAGYTANAAVVP
Ga0070711_1007641741	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VSPPAPRRRWARAGNVLLVVLVTALQLAAPRAVSSARAPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAVCV
Ga0070694_1006036391	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VRRSVPRGGWAGAGDVLLVVLVTALQVTGPRSGSPGHVPDLLAGLAGATLGVAAALVGGVALWWRRSWPVGVLAVCVVGYAVNAAVVPGVPPYA
Ga0070708_1017217841	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSQPGPRRRWARAGNVLLVVLVTALQLAGLRASSPAGLLAGPAGQAVGVAAALIGGVALWWRRS
Ga0070662_1011298132	3300005457	Corn Rhizosphere	VPRGGWAGAGDVLLVVLVTALQVTGPRSGGPGHVPDLLAGLAGATLGVAAALVGCVALWWRRSWPVGVLAVCVVGYAVNAAVVPGVPPYAGWVALYAAGVYG
Ga0070706_1009603911	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSQSAPRRRWARAGNVLLVVLVTALQLVGLRAWSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAV
Ga0070707_1004821543	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSPPAPRRRWARAGNVLLVVLVTALQLVGPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRSRPVSVLAVCVAAYAVNAVAVPGVPPYA
Ga0070698_1001714481	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSQPAPRRRWARAGNVLLVVLVTALQLAGPRAVSSVRAADLLAGVAGEVLGDAAALIGGVALWWRRS
Ga0070698_1010352012	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSPPAPRRRWAQAGNVLLVVLVTALQLAGLRAGSSARAPDLLAGVAGEVLGVAAALIGGVALWWRRSRPGSVLAVCVPAYAVNAV
Ga0070698_1012324942	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSPLVSRRGWVRAGNVLLVVLVMALQLAGLRAGSPARAAEVLAGVAGQVVGVAAALIGGVALWWRRSRPVGVLAVCV
Ga0070699_1021721001	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VSPPAPRRRWARAGNVLLVVLVTALQLVGPRAASSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRSRPVSVLAVCVAAYAVNAVAVPGVPPYTGWLALYAAG
Ga0070684_1011968963	3300005535	Corn Rhizosphere	VSPPAPRRRWARAGNVLLVVLVTALQLAGLRSGSPARTAEVLAGVAGETMGVAAALI
Ga0070697_1012662221	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSPPAPRRRWARAGNVLLVVLVTALQLAGPRAVSSVRAADLLAGVAGEVLGVVAALIGGVALWWRRSRPV
Ga0066692_105312741	3300005555	Soil	VSQPAPRRRWARAGNVLLVVLVTALQLAAPRAGSPVPGVLPGAVGEAVGAAAALIGGVVLWWRRSRPVSVLAVCVSAYAVNAVVVPGV
Ga0066698_103447402	3300005558	Soil	VLLVVLVTALQVTGPRAGSPGHAPDLLAGVAGDTVGAVAALIGGLALVWRRSRPVGVLAVCMAAYAVNAAVVPGVPPYAGW
Ga0070664_1008627252	3300005564	Corn Rhizosphere	VILGGWVSRLAPRRGWAGAGNVLLVVLVTALQVTGPRAGSPGHAPDLLAGLAGATVGVAAALIGGVALWWRRSRPVGVLAVCVAGYAVNAA
Ga0068856_1005887732	3300005614	Corn Rhizosphere	VSQPAPRRRWVRAGNVLLVVLVTALQLVGPRAMSLVPAPEVLAGVASQALGVAAALAGGVALLW
Ga0068861_1025446281	3300005719	Switchgrass Rhizosphere	VRRSAPDEGWARAGNVLLVVLVTALQVTGPRSGSPGHVPDLLAGRAWVSAGVAAALAGGVALWWRRSR
Ga0070717_114027432	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VSQPAPRRRGARAGNVLLVVLVTALQLAAPRAGSPVSGVLAGAAGQVLGIAAALIGGVALWWRRSRPVSVL
Ga0066656_104563422	3300006034	Soil	VSQPAPRRRWARAGNVLLVVLVTALQLAAPRAGSPARPAEVLAGVAGETMGVAAALIGGVALWWRRSRPV
Ga0070715_110932761	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VSQPAPRRRWVRAGNVLLVVLVTALQLVGPRAMSLVRAPEVLAGVASQALGVAAA
Ga0070712_1000699007	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLLVVLVTALQLAGPRAVSSVRTPDLLAGVAGEVLGDVAALTGGVALWWRRSRPVSVLAVCVAAYA
Ga0070712_1002346983	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VLVTALQLVGLRAGSSVRTPDLLAGVAGKVLGVAAALIGGVALWWRRSRPVSVLAICVPAYAVNAVMVPGVP
Ga0070712_1003546312	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VTRRPLPSPGWAGARDVLLVVLATALQVTGPRAGDPGHWPDLLAGLAGATVGVAAALAGGVALWWRRSRPVGVLAVCVAGYAVNAAVV
Ga0079222_110854361	3300006755	Agricultural Soil	VSPPAPRRRWARAGNVLLVVLVTALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALTGGVALWWRRSRPVSVLAVCVAAYAVNAVAVPGV
Ga0079220_119075202	3300006806	Agricultural Soil	VSPPAPRRRWARAGNVLLVVLVTALQLAGLRAGSSVRAPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAVCVAA
Ga0079220_121358681	3300006806	Agricultural Soil	VRAGNVLLVVLVTALQLEGPRAGSPVRASDLPAGVAGQAVVAAALIGGVALWWRRSRPAGVLAENLWGPHGRTGP*
Ga0075425_1008187032	3300006854	Populus Rhizosphere	VLVTALQLVGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAICV
Ga0075436_1007588701	3300006914	Populus Rhizosphere	VWRGGWAGAGDVLLVVLVTALQVTGPRSGSPGHVPDLLAGPAGSAVGVAAALAGGVALWWRR
Ga0075435_1001141613	3300007076	Populus Rhizosphere	VSQPAPRRRWARAGSVLLVVLVTALQLAGLRAGSPARASGWLGGVASQAVGVAAALIGGVALWWRRSRPVSVLAICVPAYAVNA
Ga0099827_111064651	3300009090	Vadose Zone Soil	VLLVVLVTALQLAGLRAGSSVRAPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAVCVAAYAVNAV
Ga0099827_115396271	3300009090	Vadose Zone Soil	VLLVVLVTALQLAGPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRSRPVSVLAVCVAA
Ga0105245_106221911	3300009098	Miscanthus Rhizosphere	VSPPALRWRWARAGNVLLVVLVTALQLAGLRSGSPARTAEVLAGVAGETMGVAAALI
Ga0105245_111867761	3300009098	Miscanthus Rhizosphere	VSQPALRRRWARAGNVLLVVLVTALQLAGLRSGSPARTAEVLAGVAGETMGVAAALI
Ga0105247_106927681	3300009101	Switchgrass Rhizosphere	VLLVVLVTALQVTGPRSGSPGHVPDLLAGPAGTSAGVAAALAGGVALWWRRSRPVVVLVVCVAGYAVQAAVVP
Ga0099792_108823552	3300009143	Vadose Zone Soil	VLLVVLVTALQLAGLRAGSPARVPEVLAGVAGETAGVAVALIGGVALWWRRSRPVSVLAICVPAYAVNAVVVPGVPPYTG
Ga0105248_115880421	3300009177	Switchgrass Rhizosphere	VLLVVLVTALQLAGLRAGSPARASGWLGGVASQAVGVAAALIGGVALLWRRSRPVSVLAICVPAYAVNAVMVPGVPP
Ga0105249_135727841	3300009553	Switchgrass Rhizosphere	VLLVVLVTALQVTGPRSGSPGHVPDLLAGRAWVSAGVAAALAGGVALWWRRSRPVVVLVVCVAG
Ga0134080_105453831	3300010333	Grasslands Soil	VLLVVLVTALQVTGPRAGSPGHAPDLLAGVAGDTVGAVAALIGGLALVWRRSRPVGVLAV
Ga0134062_101743251	3300010337	Grasslands Soil	VLLVVVVTVLQLAAPRAGSPERAPVLLAGMAGMTVGVAAALIGGVALWWRRSRPVSVLAVCVPAYAVNAVVVPGVPPYTGWLALYAA
Ga0126379_108469291	3300010366	Tropical Forest Soil	VLLVVLVTALQVTGPRSGSTGQVPDLLAGLAAATVGVAAALAGGVALWWRRSRPVAVL
Ga0134125_101614981	3300010371	Terrestrial Soil	VLLVVLVTALQVTGPRAGSPGHAPDLLAGLAGATVGVAAALIGGVALWWRRSRPVGVLAVCVAGYAVNAAVVPG
Ga0134125_104564891	3300010371	Terrestrial Soil	VLLVVLITALQLAGPRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLA
Ga0105239_120154382	3300010375	Corn Rhizosphere	VLLVVLVTALQLAGPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRSRPVGVLAVCVAAYAVNAVAVPGVPPYGGGWRCIPR
Ga0126381_1049438631	3300010376	Tropical Forest Soil	VSQPVPRLRWARAGNVLLVVLVTALQLAAPRAGSPVPGVLHVAAGLAVGVAAALIGGVALWWRR
Ga0134126_104124571	3300010396	Terrestrial Soil	VLLVVLITALQLAGPRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAVCVSAYA
Ga0134124_124901371	3300010397	Terrestrial Soil	VLLVVLVTALQVTGPRSGSPGHVPDLLAGRAWASAGVAAALAGGVALWWRRSRPVVVLVVCVAGYAVQAAV
Ga0134123_117461102	3300010403	Terrestrial Soil	VLLVVLVTALQLAGPRAVSSVGTPDLLAGVAGEVVRVAAALIGGVALWWRRSRPVSVLAVCRRTP*
Ga0151490_10846001	3300011107	Soil	VLLVVLVTALQVTGPRSGSPGHVPDLLAGPAGTAVGVAAALIGGVALVWRRSRPIGVLAV
Ga0137383_100176331	3300012199	Vadose Zone Soil	VLLVVLVTALQLAAPRAGSPVPRVLAGAAGETAGVAAALIGGVALWWRRSRPVSVLAVCVAAY
Ga0137365_109901892	3300012201	Vadose Zone Soil	VLLVVLVTALQVTGPRSGSAGQVPDLLAGVAGTAVGVAGGVALWWRRSRPVGVLVVCVAGYAVNAAVVAGVPPYAGWVALYAAGVYGRT
Ga0137399_104790871	3300012203	Vadose Zone Soil	VLLVVLVTALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSQPVSVLAVCVAAYAVNA
Ga0137374_103521021	3300012204	Vadose Zone Soil	VLLVVLVTALQLAAPRAGSPVRAPEVLAGVAGETVRVAAALIGGVALLWRRSRPVSVLAVCVSAYAVNAVV
Ga0137362_108962122	3300012205	Vadose Zone Soil	VLLVVLVTALQLAGPRAVSSVRAADLLAGVAGEVLGDAAALIGGVALWWRRSRPVSVLAVCV
Ga0137380_104136141	3300012206	Vadose Zone Soil	VTLGAGVSPSVSHRRWTPAWDVLLVVLVTALQLVGPRAGSPVRTPELLAGPGGSALEMAAALIGGGVLLWRRSRPVGVLAVC
Ga0137380_116659401	3300012206	Vadose Zone Soil	VLLVVLVTALQVAAPRSGSPGHVPDLLAGLAGATLGAAAALIQGVTLLWRRSRPVSVLGVCVAGYAVNAAVVPGVAPYAGWVALYAAG
Ga0137376_105826492	3300012208	Vadose Zone Soil	VSPPAPRRRWARAGNVLLVVLVTALQLAAPRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAVGVAAYAVNAVVVPGVAPYAGWLALY
Ga0137379_102232641	3300012209	Vadose Zone Soil	VLLVVLVTALQLAGPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRSRPVSVLA
Ga0137378_101081155	3300012210	Vadose Zone Soil	VTLGAGVSPSVSHRRWTPAWDVLLVVLVTALQLVGPRAGSPVRTPELLAGPGGSALEMAAALIGGGVLLWRRSRPVGVLAVCVAAYGVNAVMVPGVPPYAGWFALYAAGVYRRQAG*
Ga0137377_111641701	3300012211	Vadose Zone Soil	VLLVVLVTALQLAGLRAVSSVRAADLLAGVAGDVLGDAAALIGGVALWWCRSRPVGVLAVCVSAYAVNAVA
Ga0137387_102811411	3300012349	Vadose Zone Soil	VLLVVLVTALQLAGPRAVSSVRAPDLLAGVAGEVLGDAAALTGGVALWWCRSRPVSVLAVCVSAYAVNAVAVPGVPPYAGWLALYAA
Ga0137367_100837921	3300012353	Vadose Zone Soil	VLLVVLVMALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAICVPAYAVNAVVVAGVP
Ga0137390_100310711	3300012363	Vadose Zone Soil	VLLVVLVTALQLAGLRAGSPARAPEVLAGVAGETVGVAAALIGGVALWWRRSRPVSVLAVCVPAYAVNAVVVPGVPPYAGWLA
Ga0137373_103060821	3300012532	Vadose Zone Soil	VLLVVLVTALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAVCVPAYAVNVVAVPGVPPYTGWLALYAAGAYGRQAARA
Ga0137359_103947061	3300012923	Vadose Zone Soil	VLLVVLVTALQLAGLRAGSSVRTPDFLAGVAGEVLGVAAALIGGVALWWRRSRPVGVLAVCVPAYAASA
Ga0137413_110255841	3300012924	Vadose Zone Soil	VLLVVLVTALQLAGPRAGSSVRAPDLLAGVAGEVLGVAAALIGGVVLWWRRSQPVSVLAVCVAAYAVNAVV
Ga0164301_100863961	3300012960	Soil	VLLVVLVTALQLAGPRAVSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAVCVAAYAVNAV
Ga0126369_125301121	3300012971	Tropical Forest Soil	VLLVVLVTALQVVGPRSGSPGHVPDWLTGVAGEVLGIAAALIGGVALWWRRSRPAGVLAVCVAAYGVNAVMVPGVPPYAGWFAVYAAGVYGRPAARAAK
Ga0164304_104781141	3300012986	Soil	VLLVVLVTALQLTGPRSGSPGHVPDLLAGRAWASAGVAAALAGGVALWWRRSRSVVVLVVCVAG*
Ga0157378_126963961	3300013297	Miscanthus Rhizosphere	VRRSAPDEGWARAGNVLLVVLVTALQVTGPRSGSPGHVPDLLAGPAGTSAGVAAALAGGVALWWR
Ga0157378_130131202	3300013297	Miscanthus Rhizosphere	VSPPALRWRWARAGNVLLVVLVTALQLAGLRAGSPARTAEVLAGVAGETMGVAAALIGGVALWWRRSRPV
Ga0157380_125421121	3300014326	Switchgrass Rhizosphere	VLLVVLVTALQVTGPRSGSPGHVPDLLAGPAGTSAGVAAALAGGVALWWRRSRSVVVLVVCVAGYAVQAAV
Ga0157379_114570451	3300014968	Switchgrass Rhizosphere	VLLVVLVTALQLAGPRAVSSVRTPDLLAGVAGEVLGDAAALVGGVALWWRRSRPVGVLAV
Ga0157376_111750071	3300014969	Miscanthus Rhizosphere	VLLVVLVTALQVTGPRSGSPGHVPDLLAGRAWVSAGVAAALAGGVALWWRRSRSVVVLVVCVAG
Ga0066669_108516661	3300018482	Grasslands Soil	VPRRGWAGAGDVLLVVLVTALQVTGPRSGSPGHVPDLLAGVAGTTLGVAAALAGGVALWWRRSWPVGVL
Ga0210399_112590951	3300020581	Soil	VRPPAPRRGWAGAGDVLLVVLVTALQVTGPRAGSPVHAPDLLAGVAGDTVGAVAALIGGLALVWRRSRPV
Ga0210399_114527011	3300020581	Soil	VSQPAPRRRWARAGSVLLVVLVTALQLAGLRASSPAGLLAGPAGQAVGVVAALIGGVALWWRRSRPVSVLAIC
Ga0210408_110129192	3300021178	Soil	VSQPAPRRRWARAGNVLLVVLVTALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGAALWWRRSRPGSVLAVCVPAYAVNAVMVPG
Ga0210410_101456542	3300021479	Soil	VSQPAPRRCWARAGSVLLVVLVTALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVSVLAVCVPAYAVNAVAVPGVPPYAGWLALYAA
Ga0210409_105099481	3300021559	Soil	VSQPAPGRRWARAGSVLLVVLVTALQLAGLRASSPAGLLAGPAGPAVGVAAALIGGVALLWRRSRPVGVLAVCV
Ga0247693_10439271	3300024181	Soil	VSQPAPRRRWARAGSVLLVVLVTALQLAGLRSGSPARTAEVLAGVTSQALGIAAALIG
Ga0207692_111089601	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VSQPAPRWRWARAGNVLLVVLVTALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWW
Ga0207710_106152851	3300025900	Switchgrass Rhizosphere	VRRSAPAKGWARAGNVLLVVLVTALQVTGPRSGSPGHVPDLLAGRAWVSAGVAAALAGGVALWWRRSRSVVVLVVCVA
Ga0207684_108012003	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSQSAPRRRWARAGNVLLVVLVTALQLVGLRAWSSVRTPDLLAGVAGEVLGVAAALIGGVALLW
Ga0207693_104389811	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VSRPAPRRRWARAGNVLLVVLVTALQLAGPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRSRPVSVLAVCVSAYAVNAVMVP
Ga0207663_117074521	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VSQPAPRWRWARAGNVLLVVLVTALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALW
Ga0207660_111365142	3300025917	Corn Rhizosphere	VSQPAPRRRWARAGSVLLVVLVTALQLAGLRAGSPARASGWLGGVASQAVGVAAALIGGVALL
Ga0207700_115281311	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LAPRRRWARAGNVLLVVLVTALQLVGLRSVRAPDLLAGVAGEVLGVATALIGGVALLWRRSRPVSVLAACASAYAVNAVMVP
Ga0207644_112751481	3300025931	Switchgrass Rhizosphere	VSQPAPRRRWARAGSVLLVVLVTALQLAGLRAGSPARASGWLGGVASQAVGVAAALIGGVALLWRRSR
Ga0207665_102052481	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VSPPAPRRRWARAGNVLLVVLVTALQLAGPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRSRPVSVLAVCVAAYAVNAVA
Ga0207711_113143661	3300025941	Switchgrass Rhizosphere	VSPPALRWRWARAGNVLLVVLVTALQLAGLRSGSPARTAEVLAGVAGETMGVAAALIGGVALWWRRSRPVSVLAVCRRTP
Ga0207703_118495211	3300026035	Switchgrass Rhizosphere	VILGGWVSRLAPRRGWAGAGNVLLVVLVTALQVTGPRAGSPGHAPDLLAGLAGATVGVAAALIGGVALWWRRSRPVGVLAVCVA
Ga0207702_109829431	3300026078	Corn Rhizosphere	VRRSAPAKGWARAGNVLLVVLVTALQVTGPRSGSPGHVPDLLAGRAWVSAGVAAALAGGVALWWRRSRPVVVLVVCVAGYAVQAAVVPGVPPYAGWVALYAAGAYGGGPR
Ga0209350_10819562	3300026277	Grasslands Soil	VPRRGWAGAGDVLLVVLVTALQVTGPRSGSPGHVPDLLAGLAGATFGVAAALVGGVALWWRRSWPVGVLAVCVAGY
Ga0257146_10407512	3300026374	Soil	VSQPAPRGRWARAGNVLLVVLVTALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALW
Ga0247682_11094891	3300028146	Soil	VSPPAPRRRWARAGNVLLVVLVTALQLASPRAVSSVRAPDLLAGVAGEVLGDAAALIGGVALWWRRSRPVGVLAVCVAAYAVNAVAVPGVPPYGGGWRCIPRAPM
Ga0268266_107291421	3300028379	Switchgrass Rhizosphere	VILGGWVSRLAPRRGWAGAGNVLLVVLVTALQVTGPRAGSPGHAPDLLAGLAGATVGVAAALIGGVALWWRRSRPVGVLAVCVAGYAVNAAVVPGVPPYAGWVALYAAGVYGG
Ga0307313_101158131	3300028715	Soil	VPRRGWAGAGDVLLVVLVTALQVTGPRSGSPGHVPDLLAGLAGATFGVAAALVGGVALWWRRSWPVGVLAVCVAGYAVN
Ga0307470_105788092	3300032174	Hardwood Forest Soil	VPRGGWAGAGDVLLVVLVTALQVTGPRSGGPGHVPDLLAGLAGATLGVAAALVGGVAVWWRRSWPIGVLAV
Ga0307471_1005745022	3300032180	Hardwood Forest Soil	VSPPALRWRWARAGNVLLVVLVTALQLAGLRSGSPARTAEVLAGVTSQALGIAAALIGGVALWWRRSR
Ga0307471_1025179881	3300032180	Hardwood Forest Soil	VSQPAPRRRWARAGNVLLVVLVTALQLAGLRAGSSVRTPDLLAGVAGEVLGVAAALIGGVALWWRRSRPVS
Ga0373948_0041137_730_966	3300034817	Rhizosphere Soil	MPRRGWAGARDVLLVVLVTALQVAGPRSGSPGHVPDLLAGPAGTAAGMAAALAGGVALWWRRSRPAGVLAVCVAGYAVQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079238

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences