Metagenome Family F079222

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079222
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	49 residues
Representative Sequence	MKVKIYNEEGRLVASDEATILELLENNGYIIDPDEKEMKKLRIEHGVSDE
Number of Associated Samples	69
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	62.93 %
% of genes near scaffold ends (potentially truncated)	18.10 %
% of genes from short scaffolds (< 2000 bps)	92.24 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.345 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (49.138 % of family members)
Environment Ontology (ENVO)	Unclassified (96.552 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (87.069 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.64% β-sheet: 6.41% Coil/Unstructured: 67.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01612	DNA_pol_A_exo1	0.86
PF01165	Ribosomal_S21	0.86
PF13155	Toprim_2	0.86
PF01726	LexA_DNA_bind	0.86
PF12957	DUF3846	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
All Organisms	root	All Organisms	39.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
Viruses	superkingdom	All Organisms → Viruses	27.59 %
cellular organisms	root	All Organisms → cellular organisms	12.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	17.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.90 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.59 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.72 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.90 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.86 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.31 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	2.59 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.59 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.72 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.86 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.90 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	4.31 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	2.59 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	2.59 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1.72 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.86 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.90 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	4.31 %
uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	2.59 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2.59 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1.72 %
unclassified Methylophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae	0.86 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.90 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	4.31 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	2.59 %
uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	2.59 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1.72 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	0.86 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.90 %
uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	2.59 %
Xanthomarina	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina	1.72 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1.72 %
Winogradskyella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella	1.72 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1.72 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.86 %
Candidatus Pelagibacter sp. TMED197	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED197	0.86 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	0.86 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.90 %
uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	2.59 %
unclassified Winogradskyella	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella	1.72 %
Xanthomarina gelatinilytica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	1.72 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1.72 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1.72 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.86 %
Candidatus Pelagibacter sp. TMED197	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED197	0.86 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	0.86 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.34 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	17.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.90 %
uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	2.59 %
Winogradskyella sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	1.72 %
Xanthomarina gelatinilytica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	1.72 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1.72 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1.72 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.86 %
Candidatus Pelagibacter sp. TMED197	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED197	0.86 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	0.86 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.86 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001727\|JGI24529J20061_108287	Not Available	526	Open in IMG/M
3300001731\|JGI24514J20073_1004344	Not Available	1946	Open in IMG/M
3300001731\|JGI24514J20073_1005933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1540	Open in IMG/M
3300001731\|JGI24514J20073_1015889	Not Available	723	Open in IMG/M
3300001731\|JGI24514J20073_1018097	Not Available	654	Open in IMG/M
3300001735\|JGI24520J20079_1008867	Not Available	582	Open in IMG/M
3300002231\|KVRMV2_100614809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	854	Open in IMG/M
3300002511\|JGI25131J35506_1007984	Not Available	1473	Open in IMG/M
3300002511\|JGI25131J35506_1018305	All Organisms → Viruses → environmental samples → uncultured virus	963	Open in IMG/M
3300002511\|JGI25131J35506_1023823	Not Available	842	Open in IMG/M
3300002511\|JGI25131J35506_1030325	All Organisms → Viruses → environmental samples → uncultured virus	743	Open in IMG/M
3300002760\|JGI25136J39404_1009930	Not Available	1683	Open in IMG/M
3300002760\|JGI25136J39404_1012726	Not Available	1503	Open in IMG/M
3300002760\|JGI25136J39404_1014390	Not Available	1420	Open in IMG/M
3300002760\|JGI25136J39404_1018551	Not Available	1257	Open in IMG/M
3300002760\|JGI25136J39404_1060960	Not Available	702	Open in IMG/M
3300002760\|JGI25136J39404_1084311	Not Available	596	Open in IMG/M
3300006164\|Ga0075441_10082916	Not Available	1241	Open in IMG/M
3300006164\|Ga0075441_10143057	Not Available	903	Open in IMG/M
3300006164\|Ga0075441_10250380	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	652	Open in IMG/M
3300006306\|Ga0068469_1105685	All Organisms → Viruses → Predicted Viral	2666	Open in IMG/M
3300006308\|Ga0068470_1172674	All Organisms → Viruses → Predicted Viral	1095	Open in IMG/M
3300006308\|Ga0068470_1540855	Not Available	925	Open in IMG/M
3300006310\|Ga0068471_1177560	Not Available	2114	Open in IMG/M
3300006310\|Ga0068471_1646809	Not Available	1533	Open in IMG/M
3300006315\|Ga0068487_1021668	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	5436	Open in IMG/M
3300006336\|Ga0068502_1116101	All Organisms → cellular organisms → Bacteria	15194	Open in IMG/M
3300006339\|Ga0068481_1563487	Not Available	1379	Open in IMG/M
3300006340\|Ga0068503_10494689	Not Available	969	Open in IMG/M
3300006340\|Ga0068503_10533949	Not Available	563	Open in IMG/M
3300006340\|Ga0068503_10556706	All Organisms → Viruses → environmental samples → uncultured virus	541	Open in IMG/M
3300006340\|Ga0068503_10581353	Not Available	736	Open in IMG/M
3300006340\|Ga0068503_11034869	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	516	Open in IMG/M
3300006565\|Ga0100228_1122652	Not Available	915	Open in IMG/M
3300006738\|Ga0098035_1111064	Not Available	949	Open in IMG/M
3300006750\|Ga0098058_1064983	All Organisms → Viruses → environmental samples → uncultured virus	1013	Open in IMG/M
3300006752\|Ga0098048_1101193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	872	Open in IMG/M
3300006753\|Ga0098039_1132156	All Organisms → Viruses → environmental samples → uncultured virus	855	Open in IMG/M
3300006753\|Ga0098039_1198060	All Organisms → Viruses → environmental samples → uncultured virus	681	Open in IMG/M
3300006789\|Ga0098054_1300744	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	574	Open in IMG/M
3300006926\|Ga0098057_1129334	Not Available	616	Open in IMG/M
3300008050\|Ga0098052_1148205	Not Available	931	Open in IMG/M
3300008216\|Ga0114898_1060023	All Organisms → Viruses → Predicted Viral	1194	Open in IMG/M
3300008216\|Ga0114898_1073076	Not Available	1057	Open in IMG/M
3300008216\|Ga0114898_1086012	All Organisms → Viruses → environmental samples → uncultured virus	955	Open in IMG/M
3300008217\|Ga0114899_1265031	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	525	Open in IMG/M
3300008219\|Ga0114905_1140385	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	812	Open in IMG/M
3300008740\|Ga0115663_1008118	All Organisms → Viruses → Predicted Viral	4420	Open in IMG/M
3300009481\|Ga0114932_10760047	Not Available	562	Open in IMG/M
3300009605\|Ga0114906_1255096	All Organisms → Viruses → environmental samples → uncultured virus	570	Open in IMG/M
3300010149\|Ga0098049_1262959	Not Available	523	Open in IMG/M
3300010151\|Ga0098061_1339967	All Organisms → Viruses → environmental samples → uncultured virus	511	Open in IMG/M
3300017775\|Ga0181432_1166545	Not Available	682	Open in IMG/M
3300017775\|Ga0181432_1193033	Not Available	637	Open in IMG/M
3300017775\|Ga0181432_1211779	Not Available	608	Open in IMG/M
3300017775\|Ga0181432_1251834	Not Available	557	Open in IMG/M
3300017775\|Ga0181432_1296243	All Organisms → Viruses → environmental samples → uncultured virus	513	Open in IMG/M
3300020332\|Ga0211502_1000405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED197	12940	Open in IMG/M
3300020332\|Ga0211502_1020527	Not Available	1357	Open in IMG/M
3300020447\|Ga0211691_10070437	All Organisms → Viruses → environmental samples → uncultured virus	1262	Open in IMG/M
3300020472\|Ga0211579_10154466	All Organisms → Viruses → Predicted Viral	1349	Open in IMG/M
3300020478\|Ga0211503_10110573	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	1613	Open in IMG/M
3300021442\|Ga0206685_10096881	Not Available	972	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10529578	Not Available	534	Open in IMG/M
(restricted) 3300024052\|Ga0255050_10069641	All Organisms → Viruses → environmental samples → uncultured virus	776	Open in IMG/M
(restricted) 3300024517\|Ga0255049_10359821	Not Available	670	Open in IMG/M
(restricted) 3300024520\|Ga0255047_10463552	Not Available	638	Open in IMG/M
3300025029\|Ga0207900_114816	Not Available	652	Open in IMG/M
3300025039\|Ga0207878_130281	Not Available	543	Open in IMG/M
3300025045\|Ga0207901_1035772	Not Available	670	Open in IMG/M
3300025045\|Ga0207901_1036486	Not Available	662	Open in IMG/M
3300025045\|Ga0207901_1054716	Not Available	525	Open in IMG/M
3300025045\|Ga0207901_1055468	Not Available	521	Open in IMG/M
3300025050\|Ga0207892_1012883	All Organisms → Viruses → environmental samples → uncultured virus	894	Open in IMG/M
3300025052\|Ga0207906_1004859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1986	Open in IMG/M
3300025052\|Ga0207906_1029474	Not Available	756	Open in IMG/M
3300025066\|Ga0208012_1047829	All Organisms → Viruses → environmental samples → uncultured virus	629	Open in IMG/M
3300025069\|Ga0207887_1017450	Not Available	1125	Open in IMG/M
3300025069\|Ga0207887_1037923	Not Available	781	Open in IMG/M
3300025069\|Ga0207887_1058034	Not Available	632	Open in IMG/M
3300025078\|Ga0208668_1053028	Not Available	749	Open in IMG/M
3300025082\|Ga0208156_1008553	All Organisms → Viruses → Predicted Viral	2560	Open in IMG/M
3300025103\|Ga0208013_1109969	All Organisms → Viruses → environmental samples → uncultured virus	688	Open in IMG/M
3300025108\|Ga0208793_1105039	Not Available	787	Open in IMG/M
3300025122\|Ga0209434_1131404	Not Available	692	Open in IMG/M
3300025125\|Ga0209644_1002960	Not Available	3286	Open in IMG/M
3300025125\|Ga0209644_1010768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1903	Open in IMG/M
3300025125\|Ga0209644_1014109	All Organisms → Viruses → environmental samples → uncultured virus	1694	Open in IMG/M
3300025125\|Ga0209644_1020543	Not Available	1433	Open in IMG/M
3300025125\|Ga0209644_1046165	Not Available	992	Open in IMG/M
3300025125\|Ga0209644_1054904	Not Available	915	Open in IMG/M
3300025125\|Ga0209644_1121595	Not Available	622	Open in IMG/M
3300025168\|Ga0209337_1086665	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1500	Open in IMG/M
3300025251\|Ga0208182_1057824	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	782	Open in IMG/M
3300025268\|Ga0207894_1052634	Not Available	706	Open in IMG/M
3300025305\|Ga0208684_1061564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → uncultured Mediterranean phage uvDeep-CGR2-KM22-C255	1002	Open in IMG/M
3300025873\|Ga0209757_10040666	Not Available	1347	Open in IMG/M
3300025873\|Ga0209757_10045769	All Organisms → Viruses → environmental samples → uncultured virus	1278	Open in IMG/M
3300025873\|Ga0209757_10047311	Not Available	1259	Open in IMG/M
3300025873\|Ga0209757_10060609	All Organisms → Viruses → environmental samples → uncultured virus	1121	Open in IMG/M
3300025873\|Ga0209757_10174970	All Organisms → Viruses → environmental samples → uncultured virus	676	Open in IMG/M
3300027704\|Ga0209816_1186520	Not Available	702	Open in IMG/M
3300027714\|Ga0209815_1079240	Not Available	1125	Open in IMG/M
3300027714\|Ga0209815_1107967	Not Available	920	Open in IMG/M
3300028022\|Ga0256382_1087800	All Organisms → Viruses → environmental samples → uncultured virus	743	Open in IMG/M
3300028192\|Ga0257107_1106577	Not Available	835	Open in IMG/M
3300029309\|Ga0183683_1005905	All Organisms → Viruses	3644	Open in IMG/M
3300031757\|Ga0315328_10244718	All Organisms → Viruses → Predicted Viral	1050	Open in IMG/M
3300031801\|Ga0310121_10102146	Not Available	1837	Open in IMG/M
3300031801\|Ga0310121_10320877	Not Available	901	Open in IMG/M
3300032006\|Ga0310344_10285545	Not Available	1410	Open in IMG/M
3300032130\|Ga0315333_10593127	Not Available	517	Open in IMG/M
3300032278\|Ga0310345_11725264	Not Available	611	Open in IMG/M
3300032820\|Ga0310342_100218171	All Organisms → Viruses → Predicted Viral	1947	Open in IMG/M
3300032820\|Ga0310342_100333172	Not Available	1623	Open in IMG/M
3300032820\|Ga0310342_103641473	Not Available	508	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	75.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.34%
Strait	Environmental → Aquatic → Marine → Strait	4.31%
Inlet	Environmental → Aquatic → Marine → Inlet	3.45%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.59%
Coastal	Environmental → Aquatic → Marine → Coastal	0.86%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.86%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.86%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	63.79%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	10.34%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.34%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	4.31%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.59%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.72%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.86%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.86%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	49.14%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	10.34%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.34%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	7.76%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.31%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	4.31%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	3.45%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.59%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.59%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.72%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.86%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.86%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.86%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001727	Marine viral communities from the Pacific Ocean - LP-55	Environmental	Open in IMG/M
3300001731	Marine viral communities from the Pacific Ocean - LP-37	Environmental	Open in IMG/M
3300001735	Marine viral communities from the Pacific Ocean - LP-45	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006315	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0770m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008740	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020332	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX555956-ERR598975)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300024052 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_5	Environmental	Open in IMG/M
3300024517 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3	Environmental	Open in IMG/M
3300024520 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1	Environmental	Open in IMG/M
3300025029	Marine viral communities from the Pacific Ocean - LP-39 (SPAdes)	Environmental	Open in IMG/M
3300025039	Marine viral communities from the Pacific Ocean - LP-41 (SPAdes)	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025050	Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)	Environmental	Open in IMG/M
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24529J20061_1082872	3300001727	Marine	EGRLVASDEATILELLENNDYYVDPDEKEMKKLRIKSGVDDE*
JGI24514J20073_10043446	3300001731	Marine	MHIKVYNEEGRLVANNEETICEVLVNNGYIIDAPEKEMKKLRI
JGI24514J20073_10059333	3300001731	Marine	MKAKIYNEEGRLVAADEATILELLENNGYHVDPDEEDMKKLRIEHGVSDE*
JGI24514J20073_10158891	3300001731	Marine	VANNEETICEVLVNNGYIIDAPEKEMKKLRIECGVDDQ*
JGI24514J20073_10180972	3300001731	Marine	MCKVRVYNEEGRLVANNEETICEVLENNGYIIDPSEKEMKKLRIEHGVDDE*
JGI24520J20079_10088672	3300001735	Marine	MVKIYNEEGRLVANDENSILDLLHECGYIIDPPEKEMKKLRIEHGVDDQ*
KVRMV2_1006148091	3300002231	Marine Sediment	IYNEEGRLVAINEKTILELLEEAGYLVNPDEKEMEKLRIESGV*
JGI25131J35506_10079843	3300002511	Marine	MKAKIYNEEGILVASNEATILELLEENNYHVDPDEKDMKKLRIEHGVDDE*
JGI25131J35506_10183052	3300002511	Marine	MKANIYNYEGRLIACDESTILELLEECGYMVDPDKKEMKKLRIEHGVDDE*
JGI25131J35506_10238231	3300002511	Marine	MKAKIYNEEGRLVANSEETILELLELNKYIVDPDPEEMKKLRIEHEVDNE*
JGI25131J35506_10303251	3300002511	Marine	MKAQIYNYEGRLVACDEATILELLHEAGYSVDPDEKEMKELRIHHGVDDE*
JGI25136J39404_10099302	3300002760	Marine	MKAKIYNEEGRLVANSEETIXELLELNKYIXDPDPEEMKKLRIEHXVDNE*
JGI25136J39404_10127262	3300002760	Marine	MKANIYNYEGRLVAADEATILELLENNGYIIDPDEKEMKKLRIEHGVDDE*
JGI25136J39404_10143902	3300002760	Marine	MKANIYNYEGRLVASDEATILELLENNDYIIDPDEKDMKKLRIKHGVDDE*
JGI25136J39404_10185513	3300002760	Marine	MKAKIYNEEGILVASDEATILELLEENNYHVDPDEKDMKKLRIEHGVDDE*
JGI25136J39404_10609603	3300002760	Marine	MKAEIYNYEGRLVANNEETILELLEINGYIIDPDEKDMKKLRIEHGVDDE*
JGI25136J39404_10843111	3300002760	Marine	MKTKIYNEEGRLVANNEETILELLELNKYIIDPDEKEMKKLRIHHGVDNE*
Ga0075441_100829162	3300006164	Marine	MKAKIYNEEGRLVANSEETILELLELNKYIIDPDPKEMKKLRIEHGVDNE*
Ga0075441_101430572	3300006164	Marine	MKGYNMNIKVYNEEGRLIASDEKTILELLDECGYLIDPSEEEMKKLRIKNGVDKE*
Ga0075441_102503802	3300006164	Marine	MGRGKEMNIKVYNEEGRLVASDEDTILELLDEAGYIVDPDEKEMKKLRIKHGVDDQ*
Ga0068469_11056859	3300006306	Marine	MNKNSYTVHNEEGRLVASDELTVLELLENNGYLINISESEAKQLRIENGVDDE*
Ga0068470_11726741	3300006308	Marine	MNKNSYTVHNEEGRLVASDELTVLELLENNGYLINISESEAKQLR
Ga0068470_15408554	3300006308	Marine	MNKNTIHNEEGRLVACDEATILELLEMNGYLIYISESKAKQLRIENGVNDE*
Ga0068471_11775601	3300006310	Marine	MKAKIYNYEGRLVASSEATILELLENNDYIIDPDEKDMKKLRIEHGVDDD*
Ga0068471_16468094	3300006310	Marine	YNYEGRLVASDEATILELLENNDYIIDPDEKDMKKLRIKHGVDDE*
Ga0068487_10216683	3300006315	Marine	MNKNNIYNEEGRLVACDEATILELLEENGYLINISEKEAKQLRIEHGVDDE*
Ga0068502_111610111	3300006336	Marine	MNNNTIHNEEGRLVACDEATILELLEMNGYLINISESKAKQLRIENGVNDE*
Ga0068481_15634871	3300006339	Marine	MKVRVYNEEGILVANNEETICEVLENNGYIIDPPEAEMKKLRIERGVDDQ*
Ga0068503_104946891	3300006340	Marine	EGLLVANNEETICEVLVNNGYIIDAPEKEMKKLRIECGVDDQ*
Ga0068503_105339492	3300006340	Marine	MNIKVYNEEGRLVASDEDTILELLDEAGYIVAPDEKEMKKLRIKHGVDDQ*
Ga0068503_105567061	3300006340	Marine	MKAKIYNEEGRLVASDEATILELLENNDYYIDPDEKDMKKLRIESGVDDE*
Ga0068503_105813532	3300006340	Marine	MHIKVYNEEGRLVASDEDTILELLDEAGYIVAPDEKEMKKLRIKHGVDDQ*
Ga0068503_110348691	3300006340	Marine	MKAKIYNEEGRLVANSEETILELLELNKYIIDPDPKEMKKLRIEHGVDDE*
Ga0100228_11226521	3300006565	Marine	TPVAVACDEATILELLEENGYLINISEKEAKQLRIEHGVDDE*
Ga0098035_11110643	3300006738	Marine	MKAKIYNEEGRLVASDEATILELLELNDYYVDPDPKDMKKLRIEHGVEVE*
Ga0098058_10649833	3300006750	Marine	MKAKIYNEEGRLVASNEETILELLELNGYIVDPDEAEMKKLRIESGVSDE*
Ga0098048_11011934	3300006752	Marine	MKAKIYNEEGRLVASNEETILELLELNGYIVDPDEAEMKKLRIESAVSDE*
Ga0098039_11321561	3300006753	Marine	MKAKIYNEEGRLVASNEETILELLELNDYYVDPDPKAMKKLRIESGVSDE*
Ga0098039_11980602	3300006753	Marine	MKAKIYNEEGRLVAADEATILELLENNGYHVDPDEKDMKKLRIESGVDDE*
Ga0098054_13007442	3300006789	Marine	MNIKIYNEEGRLVACDEETICELLENNGYIINPSEKEIKKLRIKSGVEDEG*
Ga0098057_11293342	3300006926	Marine	MNNNTIHNEEGRLVACDEATILELLEMNGYLINISESKANQLRIENGVNDE*
Ga0098052_11482052	3300008050	Marine	MKAEIYNYEGRLVANNEETILELLEINGYIIDPDEEDMKKLRIEHGVDDE*
Ga0114898_10600232	3300008216	Deep Ocean	MKAKIYNEEGRLVAINEKTILELLEEAGYLVNPDEKEMEKLRIESGV*
Ga0114898_10730763	3300008216	Deep Ocean	MKAKIYNEEGRLVANSEETILELLELNKYIVDPDPEEMKKLRIHHGVDNE*
Ga0114898_10860124	3300008216	Deep Ocean	MKAKIYNEEGRLVASDEATILELLEESGYSVNPDEKDMKKLRIEHGVDDD*
Ga0114899_12650313	3300008217	Deep Ocean	ASDEATILELLEVNDYIIDPDEKDMKKLRIEHGIEEE*
Ga0114905_11403853	3300008219	Deep Ocean	MKYKIYNEEGRLVASDEATILELLEVNDYIIDPDEKDMKKLRIEHGIEEE*
Ga0115663_100811817	3300008740	Marine	MNKNDIYNEEGRLVACDEATILELLEENGYLINISEKEAKQLRIENGVDDE*
Ga0114932_107600471	3300009481	Deep Subsurface	MKAKIYNEEGRLVACSEETILELLELNNYYVDPDPKDMKKLRIEHGVEIED*
Ga0114906_12550961	3300009605	Deep Ocean	KIYNEECRLVANSEETILELLELNKYIVDPDPEEMKKLRIHHGVDNE*
Ga0098049_12629592	3300010149	Marine	MKAKIYNEEGRLVASDEATILELLELNDYYVDPDPKEMKKLRVENGVEIEN*
Ga0098061_13399671	3300010151	Marine	MKAKIYNEEGRLVACSEETILELLELNDYYVDPDPKAMKKLRIESGVSDE*
Ga0181432_11665453	3300017775	Seawater	MNKNSYTVHNEEGRLVASDELTVLELLENNGYLINISESEAKQLRIE
Ga0181432_11930331	3300017775	Seawater	MTNIKVYNEEGRLVASDEDTILELLDEAGYIVDPDEKEMKKLRIKHGVDDQ
Ga0181432_12117792	3300017775	Seawater	MKAKIYNEEGRLVACDESTILELLEEAGYIVDPDEKEMKKLRIEHGVSDE
Ga0181432_12518342	3300017775	Seawater	MKHKIYNYEGRLVASDESTILELLEENDYIIDPDEKDMKKLRIKHGVEEE
Ga0181432_12962432	3300017775	Seawater	MKAEIYNYEGRLVANNEETILELLELNGYIIDPDEKDMKKLRIEHGVDDE
Ga0211502_100040513	3300020332	Marine	MNNNTVHNEEGRLVACDEATILELLEENGYLINISEKEAKQLRIEHGVDDE
Ga0211502_10205272	3300020332	Marine	MKVKIYNEEGRLVASDEATILELLELNNYYVDPNPKDMKKLRIEHGVEVE
Ga0211691_100704372	3300020447	Marine	MKAKIYNEEGRLVASDEATILELLEENGYLIDPNEKEMKKLRIESGVSDE
Ga0211579_101544664	3300020472	Marine	MNKNNIYNEEGRLVACDEATILELLENNGYLINISESEAKQLRIESGVADE
Ga0211503_101105735	3300020478	Marine	MKAKIYNEEGRLIATNEKTILELLEEAGYLVNPDEKEMEKLRIESG
Ga0206685_100968812	3300021442	Seawater	MKVRVYNEEGILVANNEETICEVLENNGYIIDPPEAEMKKLRIERGVDDQ
(restricted) Ga0233412_105295781	3300023210	Seawater	MKAKIYNYEGRLVANNEETILELLELNGYIIDPDPKDMKKLRIEHGVDDE
(restricted) Ga0255050_100696412	3300024052	Seawater	MKVKIYNEEGRLVASDEATILELLENNGYIIDPDEKEMKKLRIEHGVSDE
(restricted) Ga0255049_103598213	3300024517	Seawater	MKVKIYSEEGRLVASDEATILELLENNGYIIDPDEKEMKKLRIEHGVSDE
(restricted) Ga0255047_104635521	3300024520	Seawater	MKAKIYNEEGRLVADDETTILELLENNGYHVDPDEKEMKKLRIKSGVSDE
Ga0207900_1148161	3300025029	Marine	MKAKIYNEEGRLVACSEATILELLEEAGYMVDPDEKEMKKLRIESGASDE
Ga0207878_1302812	3300025039	Marine	MNIKVYNEEGRLVASDEDTILELLDEAGYIVDPDEKEMKKLRIKHGVDDQ
Ga0207901_10357722	3300025045	Marine	MHIKVYNEEGRLVANNEETICEVLVNNGYMIDAPEKEMKKLRIECGVDDE
Ga0207901_10364861	3300025045	Marine	MKAKIYNEEGRLVAANEATILELLENNGYHVDPDEEDMKKLRIEHGVSDE
Ga0207901_10547161	3300025045	Marine	MNIKVYNEEGLLVANNEETICEVLVNNGYIIDAPEEEMKKLRIEHGVDDE
Ga0207901_10554682	3300025045	Marine	MNIKVYNEEGLLIATDEEQICELLENNGYIIDPPEEEMKKLRIEQGVDDQ
Ga0207892_10128832	3300025050	Marine	MKAKIYNEEGRLVANSEETILELLELNKYIIDPDEEEMKKLRIKSGASDE
Ga0207906_10048594	3300025052	Marine	MKAKIYNEEGRLVAADEATILELLENNGYHVDPDEEDMKKLRIEHGVSDE
Ga0207906_10294742	3300025052	Marine	MCKVRVYNEEGRLVANNEETICEVLENNGYIIDPSEKEMKKLRIEHGVDDE
Ga0208012_10478292	3300025066	Marine	MKAKIYNEEGRLVASNEETILELLELNGYIVDPDEAEMKKLRIESGVSDE
Ga0207887_10174501	3300025069	Marine	KNMKAKIYNEEGRLVANSEETILELLELNKYIIDPDEEEMKKLRIKSGASDE
Ga0207887_10379232	3300025069	Marine	IKVYNEEGRLVANNEETICEVLVNNGYIIDAPEKEMKKLRIECGVDDQ
Ga0207887_10580342	3300025069	Marine	MKAKIYNEEGRLVACSEATILELLEEAGYMVDPDEKEMKKLRIERGVSDE
Ga0208668_10530281	3300025078	Marine	MNNNTIHNEEGRLVACDEATILELLEMNGYLINISESKAKQLRI
Ga0208156_10085533	3300025082	Marine	MNNNTIHNEEGRLVACDEATILELLEMNGYLINISESKAKQLRIENGVNDE
Ga0208013_11099692	3300025103	Marine	MKAKIYNEEGRLVASDEATILELLELNDYYVDPDPKDMKKLRIEHGVEVE
Ga0208793_11050393	3300025108	Marine	MKAKIYNEEGRLVASDEATILELLELNDYYVDPDPKEMKKLRVENGVEIEN
Ga0209434_11314041	3300025122	Marine	MKAEIYNYEGRLVANNEETILELLEINGYIIDPDEEDMKKLRIEHGVDDE
Ga0209644_10029604	3300025125	Marine	MKAKIYNEEGRLVANSEETILELLELNKYIVDPDPEEMKKLRIEHEVDNE
Ga0209644_10107683	3300025125	Marine	MKTKIYNEEGRLVANNEETILELLELNKYIIDPDEKEMKKLRIHHGVDNE
Ga0209644_10141094	3300025125	Marine	MKAKIYNEEGVLVASNEATILELLEENNYHVDPDEKDMKKLRIEHGVDDE
Ga0209644_10205433	3300025125	Marine	MKAQIYNYEGRLVACDEATILELLHEAGYSVDPDEKEMKELRIHHGVDDE
Ga0209644_10461652	3300025125	Marine	MKANIYNYEGRLVASDEATILELLENNDYIIDPDEKDMKKLRIKHGVDDE
Ga0209644_10549042	3300025125	Marine	MKAQIYNYEGRLVANSEKTILELLELNKYIIDPDPKEMKKLRIEHGVSDE
Ga0209644_11215952	3300025125	Marine	VSVGGFKFVDMKAKIYNYEGRLVANDEATTLELLENNGYKIDPPEEEMKDLRIESGVDYK
Ga0209337_10866654	3300025168	Marine	YNEEGLLVANDIDTILEVLENNGYHTNMSEEEAKKLRIER
Ga0208182_10578243	3300025251	Deep Ocean	MKAKIYNEEGRLVAINEKTILELLEEAGYLVNPDEKEMEKLRIESGV
Ga0207894_10526342	3300025268	Deep Ocean	MKAKIYNEEGRLVAADEATILELLENNGYHVDPDEKEMKKLRIESGAEIE
Ga0208684_10615643	3300025305	Deep Ocean	MKYKIYNEEGRLVASDEATILELLEVNDYIIDPDEKDMKKLRIEHGIEEE
Ga0209757_100406662	3300025873	Marine	MKAEIYNYEGRLVANNEETILELLEINGYIIDPDEKDMKKLRIEHGVDDE
Ga0209757_100457693	3300025873	Marine	MKAKIYNEEGILVASDEATILELLELNGYIIDPDKKDMKKLRILSGAEVE
Ga0209757_100473113	3300025873	Marine	MKAKIYNYEGRLVAADEATILELLEENDYYVDPDEEDMKKLRIEHGVDDE
Ga0209757_100606094	3300025873	Marine	MKANIYNYEGRLVAADEATILELLENNGYIIDPDEKEMKKLRIEHGVDDE
Ga0209757_101749702	3300025873	Marine	MKAKIYNEEGILVASDEATILELLEENNYHVDPDEKDMKKLRIEHGVDDE
Ga0209816_11865204	3300027704	Marine	IGLIMKGYNMNIKVYNEEGRLIASDEKTILELLDECGYLIDPSEEEMKKLRIKNGVDKE
Ga0209815_10792402	3300027714	Marine	MKAKIYNEEGRLVANSEETILELLELNKYIIDPDPKEMKKLRIEHGVDNE
Ga0209815_11079672	3300027714	Marine	MKGYNMNIKVYNEEGRLIASDEKTILELLDECGYLIDPSEEEMKKLRIKNGVDKE
Ga0256382_10878003	3300028022	Seawater	MKAKIYNEEGRLVACSEETILELLENNGYIIDPNEEDMKKLRIEHGVDDE
Ga0257107_11065772	3300028192	Marine	MHIKVYNEEGRLVANNEETICEVLVNNGYIIDAPEKEMKKLRIECGVDDQ
Ga0183683_100590512	3300029309	Marine	MKIKVYNEEGILVACDEETICELIENNGYKINPSKKEMKKLRIESGYEDENS
Ga0315328_102447184	3300031757	Seawater	MKKNNTIHNEEGRLVACDEATILELLENNGYLINISESEAKQLRIESGVADE
Ga0310121_101021462	3300031801	Marine	MKAKIYNYEGRLVASDEATILELLENNDYHVDPDEKDMKKLRIESGVDDE
Ga0310121_103208772	3300031801	Marine	MKYKIYNYEGRLVASDEATILELLENNDYIIDPDEKDMKKLRIEHGVEIE
Ga0310344_102855452	3300032006	Seawater	MKAKIYNEEGRLVACSEETILELLELNDYYVDPDPKDMKKLRIEHGVEIET
Ga0315333_105931273	3300032130	Seawater	RLVACDEATILELLENNGYLINISESEAKQLRIESGVADE
Ga0310345_117252642	3300032278	Seawater	MKAKIYNYEGRLVASSEATILELLENNDYIIDPDEKDMKKLRIEHGVDDD
Ga0310342_1002181716	3300032820	Seawater	MNKNSYTVHNEEGRLVASDELTVLELLENNGYLINISESEAKQLRIENGVDDE
Ga0310342_1003331722	3300032820	Seawater	MCNSKVYNYEGRLVASDESTILEVLENNGYKIDPPEAEMKQLRIEHGVDDE
Ga0310342_1036414732	3300032820	Seawater	MVKIYNEEGRLVASDENSILDLLYECGYIIDPPEKEMKKLRIEHGVDDQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters