Metagenome Family F079150

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079150
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	61 residues
Representative Sequence	MSVTNQRATCPGPLVERRPGVGECARGDECEVLALVDDYLAYRNAHMRVTSEWQEPRS
Number of Associated Samples	91
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.97 %
% of genes near scaffold ends (potentially truncated)	31.90 %
% of genes from short scaffolds (< 2000 bps)	91.38 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.552 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (21.552 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.552 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.44% β-sheet: 10.47% Coil/Unstructured: 72.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01243	Putative_PNPOx	12.07
PF13298	LigD_N	7.76
PF03795	YCII	5.17
PF01551	Peptidase_M23	4.31
PF03640	Lipoprotein_15	3.45
PF07690	MFS_1	1.72
PF13577	SnoaL_4	1.72
PF00005	ABC_tran	1.72
PF00732	GMC_oxred_N	1.72
PF12680	SnoaL_2	1.72
PF00248	Aldo_ket_red	0.86
PF00561	Abhydrolase_1	0.86
PF07858	LEH	0.86
PF10473	CENP-F_leu_zip	0.86
PF12681	Glyoxalase_2	0.86
PF11716	MDMPI_N	0.86
PF01625	PMSR	0.86
PF07883	Cupin_2	0.86
PF00487	FA_desaturase	0.86
PF07311	Dodecin	0.86
PF02958	EcKL	0.86
PF06470	SMC_hinge	0.86
PF13185	GAF_2	0.86
PF00144	Beta-lactamase	0.86
PF11239	DUF3040	0.86
PF03992	ABM	0.86
PF13302	Acetyltransf_3	0.86
PF00486	Trans_reg_C	0.86
PF16363	GDP_Man_Dehyd	0.86
PF01636	APH	0.86
PF00440	TetR_N	0.86
PF11578	DUF3237	0.86
PF08546	ApbA_C	0.86
PF08281	Sigma70_r4_2	0.86
PF00795	CN_hydrolase	0.86
PF00196	GerE	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	5.17
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	3.45
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.72
COG1196	Chromosome segregation ATPase Smc	Cell cycle control, cell division, chromosome partitioning [D]	0.86
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.86
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.86
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.86
COG2334	Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist	Signal transduction mechanisms [T]	0.86
COG0510	Thiamine kinase or a related kinase	Coenzyme transport and metabolism [H]	0.86
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.86
COG3173	Predicted kinase, aminoglycoside phosphotransferase (APT) family	General function prediction only [R]	0.86
COG3178	Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family	General function prediction only [R]	0.86
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.86
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.86
COG3631	Ketosteroid isomerase-related protein	General function prediction only [R]	0.86
COG4308	Limonene-1,2-epoxide hydrolase LimA/EphG	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.55 %
Unclassified	root	N/A	28.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.55 %
Unclassified	root	N/A	28.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.55 %
Unclassified	root	N/A	28.45 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.03 %
Unclassified	root	N/A	28.45 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.14 %
Unclassified	root	N/A	28.45 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	1.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.90 %
Unclassified	root	N/A	28.45 %
Candidatus Dormibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter	1.72 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.72 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	6.90 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.17 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.59 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	2.59 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.72 %
unclassified Candidatus Dormibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter	1.72 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.86 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	6.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.17 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	2.59 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	1.72 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	1.72 %
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	1.72 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.72 %
Thermoactinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae	0.86 %
unclassified Propionibacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales	0.86 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.86 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	6.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.17 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.59 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	1.72 %
Yinghuangia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Yinghuangia	1.72 %
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	1.72 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	1.72 %
Solihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans	0.86 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.86 %
Laceyella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Laceyella	0.86 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Modestobacter excelsi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter excelsi	6.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.17 %
unclassified Gordonia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → unclassified Gordonia	1.72 %
unclassified Yinghuangia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Yinghuangia → unclassified Yinghuangia	1.72 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	1.72 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	1.72 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.86 %
Frankia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli	0.86 %
Solihabitans fulvus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans → Solihabitans fulvus	0.86 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.86 %
Laceyella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Laceyella	0.86 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Modestobacter excelsi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter excelsi	6.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.17 %
Gordonia sp. WA4-43	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → unclassified Gordonia → Gordonia sp. WA4-43	1.72 %
Yinghuangia sp. KLBMP8922	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Yinghuangia → unclassified Yinghuangia → Yinghuangia sp. KLBMP8922	1.72 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	1.72 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	1.72 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.86 %
Frankia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli	0.86 %
Solihabitans fulvus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans → Solihabitans fulvus	0.86 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.86 %
Laceyella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Laceyella	0.86 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725000\|GPWRP_F5MPXY302I0IU6	Not Available	515	Open in IMG/M
2170459015\|G14TP7Y01BSZCP	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105155151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter excelsi	720	Open in IMG/M
3300000891\|JGI10214J12806_11228233	Not Available	700	Open in IMG/M
3300000956\|JGI10216J12902_120273315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter excelsi	895	Open in IMG/M
3300000956\|JGI10216J12902_121457557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1191	Open in IMG/M
3300002568\|C688J35102_117876021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300002568\|C688J35102_119250285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	661	Open in IMG/M
3300002568\|C688J35102_119405932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	689	Open in IMG/M
3300002568\|C688J35102_119523970	Not Available	712	Open in IMG/M
3300004114\|Ga0062593_102637801	Not Available	571	Open in IMG/M
3300004153\|Ga0063455_100632306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	704	Open in IMG/M
3300004157\|Ga0062590_100152280	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300004463\|Ga0063356_103133498	Not Available	712	Open in IMG/M
3300004479\|Ga0062595_100530444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → unclassified Gordonia → Gordonia sp. WA4-43	894	Open in IMG/M
3300004479\|Ga0062595_101373989	Not Available	641	Open in IMG/M
3300004479\|Ga0062595_101913770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter excelsi	569	Open in IMG/M
3300004643\|Ga0062591_101086328	Not Available	769	Open in IMG/M
3300005093\|Ga0062594_100010167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3343	Open in IMG/M
3300005093\|Ga0062594_100757852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter excelsi	888	Open in IMG/M
3300005093\|Ga0062594_101541490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300005290\|Ga0065712_10233332	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300005328\|Ga0070676_10630080	Not Available	776	Open in IMG/M
3300005332\|Ga0066388_100768086	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300005332\|Ga0066388_107937203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Yinghuangia → unclassified Yinghuangia → Yinghuangia sp. KLBMP8922	531	Open in IMG/M
3300005337\|Ga0070682_101144013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300005338\|Ga0068868_100951813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	783	Open in IMG/M
3300005338\|Ga0068868_101158505	Not Available	713	Open in IMG/M
3300005356\|Ga0070674_100347880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	1196	Open in IMG/M
3300005365\|Ga0070688_100586977	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005365\|Ga0070688_101305842	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005434\|Ga0070709_11291073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300005455\|Ga0070663_101307242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter excelsi	640	Open in IMG/M
3300005535\|Ga0070684_101408002	Not Available	657	Open in IMG/M
3300005615\|Ga0070702_101771966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter excelsi	515	Open in IMG/M
3300005764\|Ga0066903_105823399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Yinghuangia → unclassified Yinghuangia → Yinghuangia sp. KLBMP8922	647	Open in IMG/M
3300005764\|Ga0066903_105823602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Laceyella	647	Open in IMG/M
3300005764\|Ga0066903_107880820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → unclassified Gordonia → Gordonia sp. WA4-43	547	Open in IMG/M
3300005764\|Ga0066903_108980632	Not Available	506	Open in IMG/M
3300006041\|Ga0075023_100256201	Not Available	702	Open in IMG/M
3300006046\|Ga0066652_101371562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300006047\|Ga0075024_100258934	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300006047\|Ga0075024_100292357	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300006050\|Ga0075028_100224491	Not Available	1022	Open in IMG/M
3300006057\|Ga0075026_100000041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38594	Open in IMG/M
3300006057\|Ga0075026_100028865	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300006057\|Ga0075026_100085474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1545	Open in IMG/M
3300006059\|Ga0075017_100018858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4467	Open in IMG/M
3300006059\|Ga0075017_101481305	Not Available	534	Open in IMG/M
3300006102\|Ga0075015_100074663	Not Available	1658	Open in IMG/M
3300006172\|Ga0075018_10694748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	549	Open in IMG/M
3300006174\|Ga0075014_100054177	Not Available	1735	Open in IMG/M
3300006354\|Ga0075021_10887338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	578	Open in IMG/M
3300006844\|Ga0075428_100605022	Not Available	1171	Open in IMG/M
3300006845\|Ga0075421_101308932	Not Available	802	Open in IMG/M
3300006852\|Ga0075433_11652544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter excelsi	552	Open in IMG/M
3300006854\|Ga0075425_101588841	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300009098\|Ga0105245_12129293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300009137\|Ga0066709_100346226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2040	Open in IMG/M
3300009176\|Ga0105242_10331879	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300009177\|Ga0105248_13020794	Not Available	536	Open in IMG/M
3300009789\|Ga0126307_10016262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5529	Open in IMG/M
3300009789\|Ga0126307_10789302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300009840\|Ga0126313_10029095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3767	Open in IMG/M
3300009840\|Ga0126313_10281990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1295	Open in IMG/M
3300009840\|Ga0126313_10535165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	940	Open in IMG/M
3300009870\|Ga0131092_11086379	Not Available	640	Open in IMG/M
3300010037\|Ga0126304_11241120	Not Available	511	Open in IMG/M
3300010166\|Ga0126306_10003777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8849	Open in IMG/M
3300010371\|Ga0134125_10184556	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2323	Open in IMG/M
3300010371\|Ga0134125_12638949	Not Available	546	Open in IMG/M
3300010373\|Ga0134128_11102293	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300010375\|Ga0105239_12840526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300010399\|Ga0134127_11940399	All Organisms → cellular organisms → Bacteria → Terrabacteria group	666	Open in IMG/M
3300011421\|Ga0137462_1181313	Not Available	521	Open in IMG/M
3300012212\|Ga0150985_103763415	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300012907\|Ga0157283_10388549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300012930\|Ga0137407_11709306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300012951\|Ga0164300_10150011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1091	Open in IMG/M
3300012955\|Ga0164298_10588088	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300012957\|Ga0164303_10944392	Not Available	608	Open in IMG/M
3300012960\|Ga0164301_10569250	Not Available	830	Open in IMG/M
3300012984\|Ga0164309_10165931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1486	Open in IMG/M
3300012984\|Ga0164309_11228800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter excelsi	630	Open in IMG/M
3300012984\|Ga0164309_11742878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	534	Open in IMG/M
3300012987\|Ga0164307_11688710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300012988\|Ga0164306_11174563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300012989\|Ga0164305_11954470	Not Available	534	Open in IMG/M
3300014969\|Ga0157376_11446037	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300015189\|Ga0167667_1109443	Not Available	512	Open in IMG/M
3300015374\|Ga0132255_103692857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300017959\|Ga0187779_10357270	Not Available	945	Open in IMG/M
3300018469\|Ga0190270_11742298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	677	Open in IMG/M
3300018476\|Ga0190274_10510165	Not Available	1205	Open in IMG/M
3300021478\|Ga0210402_11105916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300025934\|Ga0207686_10917180	Not Available	707	Open in IMG/M
3300025940\|Ga0207691_11455600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300025944\|Ga0207661_10681394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli	945	Open in IMG/M
3300026023\|Ga0207677_10583379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300026078\|Ga0207702_11459751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300026121\|Ga0207683_10293623	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300027894\|Ga0209068_10023582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3015	Open in IMG/M
3300027894\|Ga0209068_10110464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	1459	Open in IMG/M
3300027902\|Ga0209048_10340845	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300027907\|Ga0207428_10427479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	967	Open in IMG/M
3300027911\|Ga0209698_10271596	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300028654\|Ga0265322_10166745	Not Available	630	Open in IMG/M
3300030114\|Ga0311333_11622465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans → Solihabitans fulvus	560	Open in IMG/M
3300031240\|Ga0265320_10176397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	959	Open in IMG/M
3300031251\|Ga0265327_10059974	Not Available	1947	Open in IMG/M
3300031798\|Ga0318523_10527041	All Organisms → cellular organisms → Bacteria → Terrabacteria group	584	Open in IMG/M
3300031903\|Ga0307407_11228404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300031918\|Ga0311367_11701979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300032089\|Ga0318525_10553159	All Organisms → cellular organisms → Bacteria → Terrabacteria group	588	Open in IMG/M
3300032954\|Ga0335083_10991641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	662	Open in IMG/M
3300034165\|Ga0364942_0294436	Not Available	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.14%
Host-Associated	Host-Associated	24.14%
Engineered	Engineered	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.62%
Plants	Host-Associated → Plants	24.14%
Aquatic	Environmental → Aquatic	15.52%
Solid Waste	Engineered → Solid Waste	0.86%
Wastewater	Engineered → Wastewater	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.38%
Sediment	Environmental → Aquatic → Sediment	14.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.76%
Peat	Environmental → Terrestrial → Peat	1.72%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Floodplain	Environmental → Terrestrial → Floodplain	0.86%
Grass	Engineered → Solid Waste → Grass	0.86%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.79%
Loam	Environmental → Terrestrial → Soil → Loam	15.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.86%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%
Composting	Engineered → Solid Waste → Grass → Composting	0.86%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.86%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.86%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.72%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.86%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.86%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.86%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725000	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWRP_00967260	2067725000	Soil	VTCPGPLEEERPGVGVCARGDACEVLELQKDYLAYRNAHMRVTSLWREPKPNA
4PV_01564840	2170459015	Switchgrass, Maize And Mischanthus Litter	MSVTNQRATCPGPLVEQRPGVGECARGDDCEVLSLRDDYLAYRNAHMRVTNEWQARRDQV
INPhiseqgaiiFebDRAFT_1051551512	3300000364	Soil	VTCPGPLEEERPGVGVCARGDACEVLELQSDYLAYRNAHMRVTSLWREPKPSP*
JGI10214J12806_112282331	3300000891	Soil	ALGTLAAVSVTQQGVTCPGPLEEERPGAGTCARGDACEVLELQPDYLAYRTAHLRVISLWRDPRPSDPSD*
JGI10216J12902_1202733152	3300000956	Soil	LVGTLVIVSVTHQSVTCPGPLEEERPGVGVCTRGDACEVLELQSDYLAYRNAHMRVTSLWREPKPDA*
JGI10216J12902_1214575572	3300000956	Soil	VSTLIAVSVTHQSVTCPGPLEEERPGSGTCARGDACEVLELKADYLAYRNAHIRVTSQWSKPPPIPPHDDRAV*
C688J35102_1178760211	3300002568	Soil	SSVRSPSVSVTHQSVTCPGPLEEERPGAGTCARGDACEVLELKTDYLAYRNAHIRVMSLWRQPKPD*
C688J35102_1192502852	3300002568	Soil	MSVTNQRATCPGPLVESTPGTGECARGDECEVLALQPDYLAYRNAHMRVTTEWQQRRG*
C688J35102_1194059322	3300002568	Soil	MSVTNQRATCPGPLIESRPGVGECARGEACEVLALVDDYLSYRNAHMRVTSEWQERPSQD
C688J35102_1195239701	3300002568	Soil	MSVTNQRATCPGPLVESTPGTGECARGDECEVLALQHDYLSYRNAHMRVTTEWQQRRD
Ga0062593_1026378011	3300004114	Soil	SSPPVGSLDGVSVTHQGVTCPGPLEEERPGVGVCARGDACDVLELSGDYLTYRNAHMRVTSLWRQPGPTASSDDPD*
Ga0063455_1006323062	3300004153	Soil	MSVTNQRATCPGPLVESTPGTGECARGEECEVLALQPDYLAYRNAHMRVTTEWQQRRG*
Ga0062590_1001522802	3300004157	Soil	VSVTHQGVTCPGPLEEERPGVGVCARGDACDVLELSGDYLTYRNAHMRVTSLWRQPGPTASSDDPD*
Ga0063356_1031334982	3300004463	Arabidopsis Thaliana Rhizosphere	PLEEQRPGAGTCARGDACEVLELQPDYLAYRTAHLRVISLWREPRPTDPSD*
Ga0062595_1005304442	3300004479	Soil	VSVTHQSVTCPGPLEESRPGAGECARGEACEVLELKTDYLAYRNAHIRVTTLWREPRPDPPRGDQAI*
Ga0062595_1013739892	3300004479	Soil	MSVTNQRATCPGPLVESTPGSGECARGDECEVLALRQDYLSYRNAHMRVTTEWQQRRD*
Ga0062595_1019137702	3300004479	Soil	VTHQSVTCPGPLEEERPGVGVCARGDACEVLELQSDYLAYRNAHMRVTSLWREPK
Ga0062591_1010863282	3300004643	Soil	MSVTNQRATCPGPLVEERPGLGECARGEECEVLPLKDDYLAYRNAHMRVTNEWQARPDRD
Ga0062594_1000101674	3300005093	Soil	VSVTHQSVTCPGPLEESRPGAGECARGDACEVLELKTDYLAYRNAHIRVTTLWREPRPDPPRGDQAI*
Ga0062594_1007578522	3300005093	Soil	LFGTLVSVSVTRQSVTCPGPLEEERPGVGVCARGDACEVLELQSDYLAYRNAHMRVTSLWREPKPNP*
Ga0062594_1015414902	3300005093	Soil	MSVTNQRATCPGPLIESQPGVGECARGEACEVLALVDDYLSYRNAHMRVTSEWQDRPSQG
Ga0065712_102333322	3300005290	Miscanthus Rhizosphere	MDVSVTHQSVTCPGPLEEERPGSGTCARGDACEVLELKADYLAYRNAHIRVTSQWSKPPPTPPHDDRAI*
Ga0070676_106300801	3300005328	Miscanthus Rhizosphere	RRYPCTRHRYARVVSVTHQSVTCPGPLEESRPGAGECARGDACEVLELKTDYLAYRNAHIRVTTLWREPRPDPPRGDQAI*
Ga0066388_1007680863	3300005332	Tropical Forest Soil	VSVTHQSVTCPGPLEEARPGVGVCARGDACEVLELSSDYLAYRNAHMRVRSLWRDPTPGASSGDPD*
Ga0066388_1079372032	3300005332	Tropical Forest Soil	MSVTNQRVTCPGPLIEERPGVGTCARGEECEALSMIDDYFAYRGAHMRVTSTWLEPRTDDQ*
Ga0070682_1011440131	3300005337	Corn Rhizosphere	MTVQNQRATCPGPLVESTPGTGECARGDECEVLGLQDDYLSYRNAHMRVTTEWQQRRD*
Ga0068868_1009518132	3300005338	Miscanthus Rhizosphere	MSVTNQRATCPGPLVERRPGVGECVRGDECEVLALVDDYLAYRNAHMRVTSEWQEPRS*
Ga0068868_1011585053	3300005338	Miscanthus Rhizosphere	QSVTCPGPLEEERPGVGVCARGDACEVLELQSDYLAYRNAHMRVTSLWREPKPNP*
Ga0070674_1003478803	3300005356	Miscanthus Rhizosphere	VTHQSVTCPGPLEESRPGAGECARGDACEVLELKTDYLAYRNAHIRVTTLWREPRPDPPR
Ga0070688_1005869772	3300005365	Switchgrass Rhizosphere	MDVSVTHQSVTCPGPLEEERPGSGTCARGDACEVLELKADYLAYRNAHIRVTSQWSKPPPAPPHDDRAI*
Ga0070688_1013058422	3300005365	Switchgrass Rhizosphere	MSVTNQRATCPGPLVERRPGVGECARGDECEVLALVDDYLAYRNAHMRVTSEWQEPRS*
Ga0070709_112910732	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	NQRVTCPGPLIETRPGVGECARGESCEALAMKDDYLSYRGAHMRVTSEWLERRTGE*
Ga0070663_1013072421	3300005455	Corn Rhizosphere	MDVSVTHQSVTCPGPLEEERPGSGTCARGDACEVLELKADYLAYRNAHLQVTSQWSKPPPAPPHD
Ga0070684_1014080022	3300005535	Corn Rhizosphere	MSVTNQRVTCPGPLVESQPGVGECSRGEACEALAFKDDYLAYRGAHMRVTSEWLERRSE
Ga0070702_1017719662	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VSVTHQSVTCPGPLEESRPGAGECARGDACEVLELKTDYLAYRNAHIRVTTLWGEPRPDPPRGDQAI*
Ga0066903_1058233992	3300005764	Tropical Forest Soil	MSVTNQRVTCPGPLIEERPGVGTCARGEQCEALSMIDDYFAYRGAHMRVTSTWLEPPADDQ*
Ga0066903_1058236023	3300005764	Tropical Forest Soil	VSVTHQSVTCPGPLEEERPGVGVCARGDACEVLELSTDYLAYRNAHIRVTSLWRQPPPSTSSEDH*
Ga0066903_1078808202	3300005764	Tropical Forest Soil	VSVTNQSVTCPGPLEEERPGVGVCTRGDACEVLELQSDYLAYRNAHMRVTSLWREPKPKP
Ga0066903_1089806322	3300005764	Tropical Forest Soil	MSGPRASAPVHRLGAMSVTNQRVTCPGPLVEERPGVGECARGEQCEALALADDYLAYRGAHMRVTTPWLDRR
Ga0075023_1002562011	3300006041	Watersheds	MGMSVTNQRVTCPGPLIEARPGVGECARGDACEALDMKDDYLSYRGAHMRITSEWLDRPAAQ*
Ga0066652_1013715621	3300006046	Soil	VTHQSVTCPGPLEEERPGAGTCARGDACEVLELKTDYLAYRNAHIRVMSLWRQPKPD*
Ga0075024_1002589341	3300006047	Watersheds	MSVTNQRATCPGPLVESTPGTGECARGDECEVLALQHDYLSYRNAHMRVTTEWQQRRD*
Ga0075024_1002923571	3300006047	Watersheds	MAVTNPRLGCPGPLVEERPGVGECVRRDACEVLELKGDYMAYRNAHVRVMSVWLNRPDDD
Ga0075028_1002244912	3300006050	Watersheds	MSVTNQRATCPGPLIEQRPGLGECARGDECEVLALVDDYLAYRNAHMRVTNEWQARPPKD
Ga0075026_1000000419	3300006057	Watersheds	VSVTNQRVTCPGPLIEARPGVGECERGEACEALDLKNDYLSYRGAHMRITSVWLERRPPEE*
Ga0075026_1000288652	3300006057	Watersheds	MAVTNPRLGCPGPLVEERPGVGECVRRDACEVLELKGDYMAYRNAHVRVTSVWLNRPDDD
Ga0075026_1000854742	3300006057	Watersheds	VSVTNQRATCPGPLIESRPGVGECARNDECEALDLRGDYLSYRSAHLRVTAQWQERPTAD
Ga0075017_1000188584	3300006059	Watersheds	MSVTNQRVTCPGPLIEARPGIGECARGDACEALDLKDDYLTYRGAHMRITSEWLDRPAGE
Ga0075017_1014813052	3300006059	Watersheds	MSVTNQRVTCPGPLIEARPGIGECARGDACEALNMKDDYLAYRGAHMRITSEWLDRPAAEPAAE*
Ga0075015_1000746632	3300006102	Watersheds	MSVTNQRVTCPGPLIEARPGIGECARGDACEALNMKDDYLAYRGAHMRITSEWLDRPAAEPAAA*
Ga0075018_106947482	3300006172	Watersheds	RRARYSRPVSVTNQRATCPGPLIESRPGVGECARNDECEALDLRGDYLSYRSAHLRVTAQWQERPTAD*
Ga0075014_1000541772	3300006174	Watersheds	MSVTNQRVTCPGPLIEARPGIGECARGDACEALNMKDDYLAYRGAHMRITSEWLDRSAAEPAAE*
Ga0075021_108873382	3300006354	Watersheds	VTVTNQRVTCPGPLIEERPGVGDCSRGDACEVLDLRSDYLAFRNAHMRVTSVWLDPPAGA
Ga0075428_1006050221	3300006844	Populus Rhizosphere	AAVSVTQQGVTCPGPLEEQRPGAGTCARGDACEVLELQPDYLAYRTAHLRVISLWREPRPTDPSD*
Ga0075421_1013089323	3300006845	Populus Rhizosphere	CSAASAPALGTLAAVSVTQQGVTCPGPLEEERPGAGTCARGDACEVLELQPDYLAYRTAHLRVISLWREPRPTDPSD*
Ga0075433_116525442	3300006852	Populus Rhizosphere	LIGTLVIVSVTHQSVTCPGPLEEERPGVGVCARGDACEVLELQSDYLAYRNAHMRVTSLWREPKPNA*
Ga0075425_1015888411	3300006854	Populus Rhizosphere	MVGTLAGMSVTNQRVTCPGPLIESRPGVGECARGESCEALAMKDDYLSYRGAHMRVTSEWLERPAAD*
Ga0105245_121292932	3300009098	Miscanthus Rhizosphere	MVTTLARMSVTNQRVTCPGPLIETRPGVGECARGESCEALAMKDDYLSYRGAHMRVSSEWLERRTGE*
Ga0066709_1003462262	3300009137	Grasslands Soil	VSVTNQRVTCPGPLVEERPGVGECARGEACEVLDLSADYLAYRNAHMRVTSAWLERPKSD
Ga0105242_103318792	3300009176	Miscanthus Rhizosphere	VSVTNQRLTCPGPLIEERPGIGECARGDACEALAVKDDYLAYRGAHMRVNSTWLERPTGD
Ga0105248_130207942	3300009177	Switchgrass Rhizosphere	VSVTNQRATCPGPLVEERPGVGECSRGEECEVLGLKDDYLAYRNAHMRVTNVWQERPAQ*
Ga0126307_100162628	3300009789	Serpentine Soil	MSVTNQRATCPGPLVESTPGSGKCARGDDCEVLALQQDYLAYRNAHMRVTTEWQQRRD*
Ga0126307_107893022	3300009789	Serpentine Soil	MSVTNQRATCPGPLVEERPGVGECARGDECEVLPMKDDYLAYRNAHMRVTNEWQARRD*
Ga0126313_100290954	3300009840	Serpentine Soil	MSVTNQRVTCPGPLVEERPGVGQCARGDECEVLPMKDDYLAYRNAHMRVTNEWQQR*
Ga0126313_102819902	3300009840	Serpentine Soil	MSVTNQRATCPGPLVESTPGSGECARGDECEVLALQLDYLSYRNAHMRVTTEWQQRRD*
Ga0126313_105351651	3300009840	Serpentine Soil	MSVTNQRATCPGPLLEQRPGVGECARGDECEVLALVDDYLAYRNAHMRVTNEWQARPAKD
Ga0131092_110863791	3300009870	Activated Sludge	MSVTNQRATCPGPLVEERPGVGECARGDECEVLALRDDYLAYRNAHMRVTNEWQQR*
Ga0126304_112411201	3300010037	Serpentine Soil	RATCPGPLVESTPGTGECARGDECEVLALQPDYLSYRNAHMRVTTEWQQRRD*
Ga0126306_100037779	3300010166	Serpentine Soil	MSVTNQRATCPGPLVEERPGVGECARGDDCDVLALKDDYLAYRNAHMRVTNEWQARRD*
Ga0134125_101845563	3300010371	Terrestrial Soil	MVTTLARMSVTNQRVTCPGPLIETRPGVGECARGDSCEALAMKDDYLSYRGAHMRVTSEWLERRTEE*
Ga0134125_126389491	3300010371	Terrestrial Soil	MSVTNQRVTCPGPLVESQPGVGECSRGDACEALAFKDDYLAYRGAHMRVTSEWLERRSED
Ga0134128_111022931	3300010373	Terrestrial Soil	MVTTLARMSVTNQRVTCPGPLIETRPGVGECARGESCEALAMKDDYLSYRGAHMRVTSEWLERRTGE*
Ga0105239_128405261	3300010375	Corn Rhizosphere	CPGPLIETRPGVGECARGESCEALAMKDDYLSYRGAHMRVTSEWLERRTGE*
Ga0134127_119403992	3300010399	Terrestrial Soil	MVTTLARMSVTNQRVTCPGPLIETRPGVGECARGESCEALAMKDDYLSYRGAHMRVTSEWLERRTEE*
Ga0137462_11813131	3300011421	Soil	TNQRLSCPGPLVEERPGSGECARGDACEALAMVDDYLAYRSAHMRITSAWLERRDRD*
Ga0150985_1037634151	3300012212	Avena Fatua Rhizosphere	NQRATCPGPLVESTPGTGECARGDECEVLALQHDYLSYRNAHMRVTTEWQQRRD*
Ga0157283_103885492	3300012907	Soil	MSVTNQRATCPGPLVERRPGVGECARGDECEVLALADDYLAYRNAHMRVTSEWQEPRS*
Ga0137407_117093061	3300012930	Vadose Zone Soil	EARTLLRMSVTNQRVTCPGPLVEERPGVGECARQDACDVLELKDDYLAYRNAHMRVTSVWLDQPDEG*
Ga0164300_101500113	3300012951	Soil	LLGTLVSVSVTRQSVTCPGPLEEERPGVGVCARGDACEVLELQSDYLAYRNAHMRVTSLWREPKPNP*
Ga0164298_105880881	3300012955	Soil	MSVTNQRATCPGPLVERRPGVGECARGDECEVLALQHDYLSYRNAHMRVTTEWQQRRD*
Ga0164303_109443922	3300012957	Soil	MVSTLARMSVTNQRVTCPGPLIETRPGVGECSRGESCEALAMKDDYLSYRGAHMRVTSEWLERRTDE*
Ga0164301_105692501	3300012960	Soil	PLEEERPGVGVCARGDACEVLELQSDYLAYRNAHMRVTSLWREPKPNP*
Ga0164309_101659312	3300012984	Soil	MTVQNQRATCPGPLVESTPGTGECARGDECEVLALQDDYLSYRNAHMRVTAEWQQRRG*
Ga0164309_112288002	3300012984	Soil	VTHQSVTCPGPLEEERPGVGVCARGAACEVLELSADYLTYRNAHIRVTSLWREPR
Ga0164309_117428781	3300012984	Soil	QRVTCPGPLIETRPGVGECARGESCEALAMKDDYLSYRGAHMRVTSEWLERRTEE*
Ga0164307_116887102	3300012987	Soil	MSVTNQRATCPGPLVERRPGVGECARGDECEVLALVDDYLAYRNAHMRVTNEWQEPRS*
Ga0164306_111745631	3300012988	Soil	QRATCPGPLIESRPGIGECARGDECEVLALVDDYLAYRNAHMRVTSEWQEPRS*
Ga0164305_119544702	3300012989	Soil	AGRTDPRGSWLPRSRPPLFGTLVSVSVTRQSVTCPGPLEEERPGVGVCARGDACEVLELQSDYLAYRNAHMRVTSLWREPKPNP*
Ga0157376_114460371	3300014969	Miscanthus Rhizosphere	QRATCPGPLVESTPGTGECARGDECEVLALQDDYLSYRNAHMRVTAEWQQRRG*
Ga0167667_11094432	3300015189	Glacier Forefield Soil	MSVTNQRATCPGPLVESTPGTGECARGDECEVLALQQDYLSYRNAHMRVTTEW
Ga0132255_1036928572	3300015374	Arabidopsis Rhizosphere	LEEDRPGAGTCARGDACEVLELKADYLAYRNAHIRVTSQWSKPPPTPPHDDRAI*
Ga0187779_103572702	3300017959	Tropical Peatland	MSVTNQRATCPGPLIEERPGVGECARGDRCEVLELESDYLAYRIAHMRVTSTWLDRSDDH
Ga0190270_117422982	3300018469	Soil	GRTMSVTNQRVTCPGPLVESQPGVGECARGDDCEVLAFRDDYLAYRNGHMRVTSEWQQRPSRD
Ga0190274_105101652	3300018476	Soil	VSVTNQRATCPGPLVEERPGLGECARGDECEVLAQKDDYLAYRNAHMRVTSAWLERPTKD
Ga0210402_111059162	3300021478	Soil	MSVTNQRVTCPGPLIETRPGVGECARGESCEALAMKDDYLSYRGAHMRVTSEWLERRTDE
Ga0207686_109171802	3300025934	Miscanthus Rhizosphere	LFGPLVSVSVTRQSVTCPGPLEEERPGVGVCARGDACEVLELQSDYLAYRNAHMRVTSLWREPKANP
Ga0207691_114556002	3300025940	Miscanthus Rhizosphere	MSVTNQRATCPGPLVERRPGVGECARGDECEVLALVDDYLAYRNAHMRVTSEWQEPRS
Ga0207661_106813943	3300025944	Corn Rhizosphere	CVCSIRSLSGGRSTVGTMSVTNQRVTCPGPLIESEPGVGECSRGDACEALAFKDDYLAYRGAHMRVTSEWLERRSED
Ga0207677_105833792	3300026023	Miscanthus Rhizosphere	MSVTNQRATCPGPLVERRPGVGECVRGDECEVLALVDDYLAYRNAHMRVTSEWQEPRS
Ga0207702_114597511	3300026078	Corn Rhizosphere	LARMSVTNQRVTCPGPLIETRPGVGECARGESCEALAMKDDYLSYRGAHMRVTSEWLERRTGE
Ga0207683_102936232	3300026121	Miscanthus Rhizosphere	MSVTNQRATCPGPLVEERPGLGECARGDECEVLALRQDYLSYRNAHMRVTTEWQQRRD
Ga0209068_100235826	3300027894	Watersheds	MTVTNQRATCPGPLIEECPGVGECAREDACEVLELQNDYLAYRNAHMRVTSVWQQGSKDD
Ga0209068_101104642	3300027894	Watersheds	MSVTNQRATCPGPLIESRPGVGECARADQCEALDVKADYLSYRSAHLRVTAQWQERPAAD
Ga0209048_103408452	3300027902	Freshwater Lake Sediment	MSVTNQRATCPGPLLEEHPGVGECARQDTCEVLELKNDYLAYRNAHMRVRSVWQERPKDD
Ga0207428_104274791	3300027907	Populus Rhizosphere	ARVVSVTHQSVTCPGPLEESRPGAGECARGDACEVLELKTDYLAYRNAHIRVTTLWREPRPDPPRGDQAI
Ga0209698_102715963	3300027911	Watersheds	MTVTNQRATCPGPLIEERPGVGECARGDACEVLELQNDYLVYRNAHMRVTSVWQQGSKDD
Ga0265322_101667451	3300028654	Rhizosphere	RCMSVTNQRATCPGPLVESTPGSGECARGDQCEVLALQHDYLSYRNAHMRVTTEWQQRPAKD
Ga0311333_116224652	3300030114	Fen	MSVTNQRVTCPGPLVESSPGVGECARGESCEALGFKDDYFSYRDAHMRVTSAWLERPPKE
Ga0265320_101763972	3300031240	Rhizosphere	MSVTNQRATCPGPLVESTPGSGECARGDQCEVLALQHDYLSYRNAHMRVTTEWQQRPAKD
Ga0265327_100599742	3300031251	Rhizosphere	MSVTNQRVGCPGPLVEERPGRGECARGDACEALELRADYLAYRNAHTRVTNAPVAKPAEE
Ga0318523_105270412	3300031798	Soil	MSVTNQRVTCPGPLIETRPGVGECARGESCEALAMKDDYLSYRGAHMRVTSEWLE
Ga0307407_112284042	3300031903	Rhizosphere	MSVTNQRATCPGPLVEERPGVGECARGDECEVLGMRDDYLAYRNAHMRVTNEWQGQRSGD
Ga0311367_117019792	3300031918	Fen	QRATCPGPLVESTPGNGECARGDECEVLALQHDYLSYRNAHMRVTTEWQQRRD
Ga0318525_105531592	3300032089	Soil	MVSTLARVSVTNQRVTCPGPLIETRPGVGECARGESCEALAMKDDYLSYRGAHMRVTSEWLERRTEE
Ga0335083_109916411	3300032954	Soil	MSVTNQRATCPGPLVEERPGVGECSRGGDCEVLALKDDYLAYRNAHMRVTNEWQQR
Ga0364942_0294436_295_477	3300034165	Sediment	VSVTNQRLSCPGPLVEERPGVGECARGEACEALGVQDDYLAYRSAHLRITSAWLERPDRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079150

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences