NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F079147

Metagenome / Metatranscriptome Family F079147

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079147
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 95 residues
Representative Sequence VNVQAADITGFGHQVSGYVRAFHRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFLGSP
Number of Associated Samples 90
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.76 %
% of genes near scaffold ends (potentially truncated) 31.90 %
% of genes from short scaffolds (< 2000 bps) 84.48 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (57.759 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(31.897 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.310 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124
1JGI25617J43924_100437661
2JGI25616J43925_100135662
3Ga0062387_1007608561
4Ga0070709_1000101812
5Ga0070709_106808552
6Ga0070714_1012407092
7Ga0070714_1015518351
8Ga0070713_1001736032
9Ga0070713_1005521132
10Ga0070705_1017259232
11Ga0070694_1004112842
12Ga0070708_1001265661
13Ga0070708_1004714622
14Ga0070708_1006248341
15Ga0070708_1007204422
16Ga0070706_1000512512
17Ga0070706_1005045551
18Ga0070706_1005196792
19Ga0070707_1001231084
20Ga0070707_1003154571
21Ga0070707_1006166022
22Ga0070698_1005465552
23Ga0070698_1008037772
24Ga0070699_1006719882
25Ga0070697_1017960921
26Ga0070730_100635492
27Ga0070762_103055382
28Ga0070717_105063262
29Ga0075029_1002451992
30Ga0075018_107826101
31Ga0070716_1010967252
32Ga0079222_100630372
33Ga0079221_101090351
34Ga0079221_107940981
35Ga0075425_1013739132
36Ga0075434_1017655632
37Ga0075426_102817042
38Ga0075424_1008141422
39Ga0075436_1003278302
40Ga0075435_1001193301
41Ga0105244_103975342
42Ga0099829_103964002
43Ga0099830_105712142
44Ga0099828_100601672
45Ga0099827_101210952
46Ga0099792_101803472
47Ga0134125_100204631
48Ga0134125_109705731
49Ga0134128_107136592
50Ga0136449_1010117351
51Ga0134121_124514312
52Ga0105246_108676632
53Ga0150983_161783561
54Ga0137392_103786042
55Ga0137389_105571972
56Ga0137388_106639652
57Ga0137363_105840582
58Ga0137399_115796911
59Ga0137362_113124112
60Ga0137360_111497451
61Ga0137361_114025532
62Ga0137390_108996581
63Ga0137390_119540411
64Ga0137398_107146121
65Ga0164303_106178201
66Ga0164301_104381892
67Ga0164304_108693431
68Ga0164305_111253732
69Ga0157379_103136032
70Ga0187812_11597481
71Ga0187806_10823072
72Ga0187819_105302851
73Ga0210403_102433162
74Ga0210399_100699362
75Ga0210399_103584101
76Ga0179596_104079842
77Ga0210405_102720622
78Ga0210408_101625882
79Ga0210408_114245921
80Ga0210387_106943352
81Ga0210384_102367101
82Ga0210384_114639291
83Ga0210402_101479881
84Ga0210410_113641961
85Ga0210409_103994182
86Ga0242662_102461042
87Ga0207653_104291492
88Ga0207684_101384342
89Ga0207684_101588092
90Ga0207684_101643252
91Ga0207684_110276681
92Ga0207646_101025853
93Ga0207646_105155082
94Ga0207664_101067293
95Ga0207664_107650742
96Ga0209240_10137185
97Ga0209647_10041102
98Ga0257160_10547632
99Ga0179587_111693562
100Ga0209178_10565212
101Ga0209448_102287422
102Ga0209180_103790271
103Ga0209283_101721742
104Ga0209488_100633982
105Ga0308309_118485661
106Ga0222749_106494331
107Ga0310686_1080647352
108Ga0310686_1167060881
109Ga0307473_101848842
110Ga0307478_102785862
111Ga0307470_100834691
112Ga0307471_1011793432
113Ga0307471_1015181592
114Ga0307471_1029416312
115Ga0307472_1002346541
116Ga0307472_1006650182
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.04%    β-sheet: 12.50%    Coil/Unstructured: 61.46%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090VNVQAADITGFGHQVSGYVRAFHRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFLGSPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
57.8%42.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Bog Forest Soil
Freshwater Sediment
Watersheds
Soil
Vadose Zone Soil
Terrestrial Soil
Surface Soil
Peatlands Soil
Agricultural Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Populus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
5.2%18.1%3.4%3.4%3.4%12.9%6.9%25.0%3.4%5.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25617J43924_1004376613300002914Grasslands SoilVNVQAADITGFGHQVSGYVGAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFPAEDDAIPNSHYI
JGI25616J43925_1001356623300002917Grasslands SoilVNVQAADITGFGHQVSGYVGAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFPAEDDAIPNSHYILIRQFIGSP*
Ga0062387_10076085613300004091Bog Forest SoilVNVQAADITGFGHQVGGYVRAFYRGDSDVGDIVVGYALQGLHAGNKCVRFADRVPSVRDPVPAKPMTREGVLPFLAEDDAIPSSRHILIRQFLGSP*
Ga0070709_10001018123300005434Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGRQVDGYVRTFHRGGNDVDNVVGYGFRGLQAGNNCIRFADRVSLVRAPVPAEPMTREGVLPFVAEDDSIPNSHCILIRQFLGSP*
Ga0070709_1068085523300005434Corn, Switchgrass And Miscanthus RhizosphereVNLQAEDITGFGYQLGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKCVRFADRVSSVRDPSSAEFMTREVVLPFLAEGDAIPNSHYTLTHQFLGTP*
Ga0070714_10124070923300005435Agricultural SoilMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP*
Ga0070714_10155183513300005435Agricultural SoilVNLQAEDITGFGYQLGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKCVRFADRVFSVRGPSSAELMTREGVLPFLAEGDAIPNSHYTLTHQFLGTP*
Ga0070713_10017360323300005436Corn, Switchgrass And Miscanthus RhizosphereVNLQAEDITGFGYQFGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKCVRFADRVFSVRGPSSAELMTREGVLPFLRKATPSRIRTTP*
Ga0070713_10055211323300005436Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGHQVSGYVQAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFIGSP*
Ga0070705_10172592323300005440Corn, Switchgrass And Miscanthus RhizosphereMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPATREGILPFLAEDDAIPNPHCILIRQFLGSP*
Ga0070694_10041128423300005444Corn, Switchgrass And Miscanthus RhizosphereMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRIADRMSLVRDPVPAKPVTREGILPFLAEDDAIPIPHCILIRQFLGSP*
Ga0070708_10012656613300005445Corn, Switchgrass And Miscanthus RhizosphereVNLQAPDITGFGYQVRGYVRTFYGGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAI
Ga0070708_10047146223300005445Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFIGSP*
Ga0070708_10062483413300005445Corn, Switchgrass And Miscanthus RhizosphereMNVQAADIIGLGHQVSGYVQAFHRGGNDVDDAVGYGFQSLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP*
Ga0070708_10072044223300005445Corn, Switchgrass And Miscanthus RhizosphereITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKRVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILTHQFLGSP*
Ga0070706_10005125123300005467Corn, Switchgrass And Miscanthus RhizosphereVNLQAEDIAGFGYQFGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKCVRFADRVSSVRDPSSAEFMTREGVLPFLAEGDAIPNSHYALTHQFLGSP*
Ga0070706_10050455513300005467Corn, Switchgrass And Miscanthus RhizosphereMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRIADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP*
Ga0070706_10051967923300005467Corn, Switchgrass And Miscanthus RhizosphereRLAALPGWRCGVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFIGSP*
Ga0070707_10012310843300005468Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGHQVSGYVQAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSIRDPVPAKPMTREGVLPFLAEDAIPNSHYILIRQFPGSP*
Ga0070707_10031545713300005468Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGRQVGGYVRAFYRRGNDADDVVVGYAFRGLPGGNKCVRFAGRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYIL
Ga0070707_10061660223300005468Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYVFQGLQAGNKRVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILTHQFLGSP*
Ga0070698_10054655523300005471Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGRQVGGYVRAFYRRGNDADDVVVGYAFRGLPGGNKCVRFAGRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNS
Ga0070698_10080377723300005471Corn, Switchgrass And Miscanthus RhizosphereVNAQAADITGFGHQVSGYVRAFYRGGNDVDDIAVGYAFQGLQAGHKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHNIPIRQFRGSP*
Ga0070699_10067198823300005518Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILTHQFPGSP*
Ga0070697_10179609213300005536Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGHQVSGYVQAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFPGSP*
Ga0070730_1006354923300005537Surface SoilMNVQAADITGLGHQVSDYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP*
Ga0070762_1030553823300005602SoilMNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIPQFFGSP*
Ga0070717_1050632623300006028Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILTHQFLGSP*
Ga0075029_10024519923300006052WatershedsVNVQAADITGFGHQVSGYVRAFHRGGNDVNDIVVGYAFQGLHTGNKCVRFADRVSSVRDPVSAKPRTREGVLPFLAEDDAIPNSHYILIPQFFGSP*
Ga0075018_1078261013300006172WatershedsVNVQAADITGFGRQVSGYVRAFLRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTRAGVLPFLAEDDA
Ga0070716_10109672523300006173Corn, Switchgrass And Miscanthus RhizosphereVNLQAEDIAGFGYQFGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKCVRFADRVSSVRDPSSAELMTREGVLPFLRKATPSRIRTTP*
Ga0079222_1006303723300006755Agricultural SoilVNVQAADITSFGRQVSGYVRAFHDGGNDVDDVVGYGFQCLQAENKCVRFADRVSLVRDPVPAEPMTREGVLPFLAEGDAIPNSYCILIRQFLGSP*
Ga0079221_1010903513300006804Agricultural SoilMNVQAADIAGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRAADRMSLVRDPVPAKPVTREGILPFLAEDDVIPNP
Ga0079221_1079409813300006804Agricultural SoilVNVQAADAGFGRQVGGYVRTFHRGGNDVDNVVGYGFRGLQAGNNCIRFADRVSLVRAPVPAEPMTREGVLPFVAEDDSIPNSHCILIRQFLGSP*
Ga0075425_10137391323300006854Populus RhizosphereVNLQAEDIAGFGYQFGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKCVRFADRVSSVRDPSSAEFMTREVVLPFLAEGDAIPNSHYALTHQFLGSP*
Ga0075434_10176556323300006871Populus RhizosphereVNVQAADITSFGRQVSGYVRAFHGGGNDADDIVVGYAFQGLQAGNKCVRFADRVSLVRDPVPAEPMTREGVLPFLAEGDAIPNSYCILIRQFLGSP*
Ga0075426_1028170423300006903Populus RhizosphereVNVQAADITSFGRQVSGYVRAFHGGGNDADDIVVGYAFQGLQAGNKCVRFADRVSLVRDPVPAEPMTREGVLPFVAEDDSIPNSHCILIRQFLGSP*
Ga0075424_10081414223300006904Populus RhizosphereVNLQAEDIAGFGYQFGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKCVRFADRVSSVRDPSSAEFMTREVVLPFLAEGDA
Ga0075436_10032783023300006914Populus RhizosphereVNVQAADITGFGRQVSGYVRAFHGGGNDADDIVVGYAFQGLQAGNKCVRFADRVSLVRDPVPAEPMTREGVLPFLAEGDAIPNSYCILIRQFLGSP*
Ga0075435_10011933013300007076Populus RhizosphereNVQAADITSFGRQVSGYVRAFHGGGNDADDIVVGYAFQGLQAGNKCVRFADRVSLVRDPVPAEPMTREGVLPFLAEGDAIPNSYCILIRQFLGSP*
Ga0105244_1039753423300009036Miscanthus RhizosphereVRGERARADITSFGRQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAEPMTREGVLPFLAEGDAIPNSYCILIRQFLGSP*
Ga0099829_1039640023300009038Vadose Zone SoilVNVQAADIAGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILIRQFLGSP*
Ga0099830_1057121423300009088Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFHRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILIRQFLGSP*
Ga0099828_1006016723300009089Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVPSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILIRQFLGSP*
Ga0099827_1012109523300009090Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNTSVRFADRVSSVRDPVPAEPMAREGVLPFLAEDDAIPNSHYILIRQFLGSP*
Ga0099792_1018034723300009143Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFHRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFLGSP*
Ga0134125_1002046313300010371Terrestrial SoilPSPGVDWRHSLAGGCGMNVQAADIIGLGHQVSGYVQAFHRGGNVDDAVGYGFQSLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP*
Ga0134125_1097057313300010371Terrestrial SoilVNVQAADITGFGRQVDGYVRTFHRGGNDVDNVVGYGFRGLQAGNNCIRFADRVSLVRAPVPAEPMTREGVLPFVAEDDSILNSHCILIRQFLGSP*
Ga0134128_1071365923300010373Terrestrial SoilMNVQAADIIGLGHQVSGYVQAFHRGGNDVDDVVGYDFQGLQVWNKCVRFADRVSSVRDPVPAEPMTREGVLPFLAEDDAIWNSHYILIRQFLGSP*
Ga0136449_10101173513300010379Peatlands SoilVNVQAADITGFRRQVSGYVRAFHRGGNDVNDIVVGYAFQGLHTGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHNILI
Ga0134121_1245143123300010401Terrestrial SoilVNVQAADITGFGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP*
Ga0105246_1086766323300011119Miscanthus RhizosphereVNVQAADITGFGRQVDGYVRTFHRGGNDVDDAVGYGFHGLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP*
Ga0150983_1617835613300011120Forest SoilGCGMNVQAADIIGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFPGSP*
Ga0137392_1037860423300011269Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILIRQFLGSP*
Ga0137389_1055719723300012096Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIRNSHYILIRQFLGSP*
Ga0137388_1066396523300012189Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGSKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILIRQFLGSP*
Ga0137363_1058405823300012202Vadose Zone SoilAADITGFRHQVGGYVRAFYRGGNDLDDIVVGYAFQGLPGGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFLGSP*
Ga0137399_1157969113300012203Vadose Zone SoilLAALPGWRCGVNVQAADIAGFGHQVSGYVRAFHRGGNDVNDIVVGYAFQGLHTGNKCDRFADRVSSVRDPVPAKPITREGVLPFLAEDDAVPNSHNILIRQFLGSP*
Ga0137362_1131241123300012205Vadose Zone SoilGHQVSGYVQAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDAIPNSHYILIRQFLGSP*
Ga0137360_1114974513300012361Vadose Zone SoilPGWRCGVNVQAADITGFGRQVSGYVRAFLRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILTQQFLGIP*
Ga0137361_1140255323300012362Vadose Zone SoilVNVQAADIAGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILI
Ga0137390_1089965813300012363Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFSDRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFLGSP*
Ga0137390_1195404113300012363Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLHTGNKCVRFADRVSSVGDPVPAKPMTREGVLPFLAEDDAIPNSHNILIRQFLGSP*
Ga0137398_1071461213300012683Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFLGSP*
Ga0164303_1061782013300012957SoilVRVNVQAADITGFGRQVSGYVRAVLRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFVAEDDSIPNSHCILIRQFLGSP*
Ga0164301_1043818923300012960SoilVNVQAANITGFVRQVGGYVRTFHRGGNDVDDAVGYGFQGVQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP*
Ga0164304_1086934313300012986SoilVNVQAADITGFGRQVSGYVRAFLRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVHAKPIMRAGVLPFLAEDAIPNSHYTLI
Ga0164305_1112537323300012989SoilVNVQAADITGFGRQVNGYVRAFLRGGNDVDEIVVGYAFQDLQAGNKCVRFAERVSSVRDPVPAKPMTRAGVLPFLAEDAIPNSHYILIRQFPGSP*
Ga0157379_1031360323300014968Switchgrass RhizosphereMNVQAADIIGLGHQVSGYVQAFHRGGNVDDAVGYGFQSLQAGNKCVRIADRMSLVRDPVPAKPVTREGILPFLAEDDAIPIPHCILIRQFLGSP*
Ga0187812_115974813300017821Freshwater SedimentVNVQAADITGFGHQVSGYVGAFHRGGNDVNDIVLGYAFQGLHTGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDNAIPNSHNILIRQFLGSP
Ga0187806_108230723300017928Freshwater SedimentVNVQAADITGFGHQVSGYVGAFHRGGNDVNDIVLGYAFQGLHTGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDNAIPNSHNILIRQFPGSP
Ga0187819_1053028513300017943Freshwater SedimentALPGWRCGVNVQAADITGFGHQVSGYVGAFHRGGNDVNDIVLGYAFQGLHTGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDNAIPNSHNILIRQFLGSP
Ga0210403_1024331623300020580SoilMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPVAREGVLPFLAEDDAIPNPHCILIRQFPGSP
Ga0210399_1006993623300020581SoilMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFPGSP
Ga0210399_1035841013300020581SoilVNVQAADITGFGRQVSGYVRAFLRGGNDVDDIVVGYAFQRLQAGNKCVRFADRVSSVRDPVPAKPITREGVLPFLAEDAIPNSHYTPIRQFPGSP
Ga0179596_1040798423300021086Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGSKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFLGSP
Ga0210405_1027206223300021171SoilVNVQAADITGFGRQVSGYVRAVLRGGIDVDNIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDAIPNSHYILIRQFPGSP
Ga0210408_1016258823300021178SoilVNVQAADITGFGRQVSGYVRAVLRGGIDVDNIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDAIPNSHYILIRHFPGSP
Ga0210408_1142459213300021178SoilVNLQAEDIAGFGYQFGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKCVRFADWVSSVRDPSSAEFMTREVVLPFLAEGDAIPNSHYALTHQFLGSP
Ga0210387_1069433523300021405SoilMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPARPVAREGVLPFLAEDDAIPNPHCILIRQFPGSP
Ga0210384_1023671013300021432SoilVNVQAADITGFGRQVSGYVRAVLRGGIDVDNIVVGYAFQGLQAGNKCVRFPDRVSSVRDPVPAKPMTREGVLPFLAEDAIPNSHYILIRQFPGSP
Ga0210384_1146392913300021432SoilVNAQAADITGFGHQVSGYVRAFYRGGDDVDDIAVGYAFQGLQAGHKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHNIPIRQF
Ga0210402_1014798813300021478SoilVNVQAADITGFGHQVGGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPARPVAREGVLPFLAEDDAIPNPHCILIRQFPGSP
Ga0210410_1136419613300021479SoilVNVQAADITGFGRQVSGYVRAVLRGGIDVDNIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPITREGVLPFLAEDAIPNSHYTPIRQFPGSP
Ga0210409_1039941823300021559SoilVNVQAADITGFGRQVSGYIRAVLRGGNDVDNIVVGYAFQGLQAGNKCVRFADRVSSARDPVPAKPIMREGVLPFLAEDDAIPNSHYILIRQFLGSP
Ga0242662_1024610423300022533SoilGVNVQAADITGFGRQVGGYVRAFYRRVNDADDVVVGYAFRGLPGGNKCVRLAGRVSSVRDPLPAKPMTREGVLPFLAVDDAIPNSHYILTQQFLGIP
Ga0207653_1042914923300025885Corn, Switchgrass And Miscanthus RhizosphereMRGCRDITGFGHQVSGYVQAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRYPVPAKPMTREGVLPFLAEDDAIPNSHYILTQQFLGIP
Ga0207684_1013843423300025910Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKRVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILTHQFLGSP
Ga0207684_1015880923300025910Corn, Switchgrass And Miscanthus RhizosphereTIAGRRLAALPGWRCRVNVQAADITGFGHQVRGYVRAFYRGGNDVDIVVGYAFQGLQARNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILIRQFIGSP
Ga0207684_1016432523300025910Corn, Switchgrass And Miscanthus RhizosphereVNLQAEDIAGFGYQFGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKCVRFADRVSSVRDPSSAEFMTREGVLPFLAEGDAIPNSHYALTHQFLGSP
Ga0207684_1102766813300025910Corn, Switchgrass And Miscanthus RhizosphereMNVQTADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP
Ga0207646_1010258533300025922Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGRQVGGYVRAFYRRGNDADDVVVGYAFRGLPGGNKCVRFAGRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHYILTQQFLGIP
Ga0207646_1051550823300025922Corn, Switchgrass And Miscanthus RhizosphereVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYVFQGLQAGNKRVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILTHQFPGSP
Ga0207664_1010672933300025929Agricultural SoilMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP
Ga0207664_1076507423300025929Agricultural SoilVNLQAEDITGFGYQLGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKYVRFADRVFSVRGPSSAELMTREGVLPLLAEGDAIPNSHYILIRQFLGTQ
Ga0209240_101371853300026304Grasslands SoilVNVQAADITGFGHQVSGYVGAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFPAEDDAIPNSH
Ga0209647_100411023300026319Grasslands SoilVNVQAADITGFGHQVSGYVGAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFPAEDDAIPNSHYILIRQFIGSP
Ga0257160_105476323300026489SoilVNVQAADIAGFGHQVSGYVRAFHRGGNDVDDIVVRYALHGLHTGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHSVLIRQFLGRP
Ga0179587_1116935623300026557Vadose Zone SoilVNVQAADIAGFGHQVSGYVRAFHRGGNDVNDIVVGYAFQGLHTENKCDRFADRVSSVRDPVPAKPITREGVLPFLAEDDAVPNSHNILIRQFLGSP
Ga0209178_105652123300027725Agricultural SoilVNVQAADAGFGRQVGGYVRTFHRGGNDVDNVVGYGFRGLQAGNNCIRFAGRVSLVRAPVPAEPMTREGVLPFVAEDDSIPNSHCILIRQFLGSP
Ga0209448_1022874223300027783Bog Forest SoilQAADITGFGHQVGGYVRAFYRGDSDVGDIVVGYALQGLHAGNKCVRFADRVPSVRDPVPAKPMTREGVLPFLAEDDAIPSSRHILIRQFLGSP
Ga0209180_1037902713300027846Vadose Zone SoilVNVQAADIAGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILIRQFLGSP
Ga0209283_1017217423300027875Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFYRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILIRQFLGSP
Ga0209488_1006339823300027903Vadose Zone SoilVNVQAADITGFGHQVSGYVRAFHRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEDDAIPNSHYILIRQFLGSP
Ga0308309_1184856613300028906SoilMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILI
Ga0222749_1064943313300029636SoilVNVQAADITGFGRQVSGYVRAVLRGGIDVDNIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDDAIPNSHNIPIRQFLGSP
Ga0310686_10806473523300031708SoilVNVQAADITGFGHQVSGYVRAFHRGGNDVDDIVVGYAFQGLQAGNKCVRFADRVSSVRDPVPAKPMAREGVLPFLAEEDAIPNSHYILIRQFPGSP
Ga0310686_11670608813300031708SoilRVNVQAADITGLGHQVSGYVRAFHRGGNDVDDIVVGYALQGLHTGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLADDDAIPNSHYILIRRFLGSP
Ga0307473_1018488423300031820Hardwood Forest SoilMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRAADRMSLVRDPVPAKPVTREGILPFLAEDDAIPNPHCILIRQFLGSP
Ga0307478_1027858623300031823Hardwood Forest SoilVNLQAADITGFGHQVGSYIRAFHRRGSDADDIVVDYAFQGLQPGNKWVRFADRVSLVRDPVPAESMAREGVLSFLAEDDAIPNSHYILIYQFLGSS
Ga0307470_1008346913300032174Hardwood Forest SoilGRKLAALPGWRCGVNVQAADITGFGRQVDGYVRTFHRGGNDVDNVVGYGFRGLQAGNNCIRFADRVSLVRAPVPAEPMTREGVLPFVAEDDSIPNSHCILIRQFLGSP
Ga0307471_10117934323300032180Hardwood Forest SoilVNLQAEDITGFGYHVRAFYDGDNDVDDIVVDHAFQGLQAGNKCVRFADRMSSVRDPSSAELMTREGVLPFLAEGDAIPNSHYTLTHQFLGTP
Ga0307471_10151815923300032180Hardwood Forest SoilGVNVQAADITGFGRQVSGYVRAFLRGGNDVDDIVVGYALQGLQAGNKCVRFADRVSSVRDPVPAKPMTREGVLPFLAEDAIPNSHYILIRQFPGSP
Ga0307471_10294163123300032180Hardwood Forest SoilMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMSLVRDPVPAKPVTREGILPFLAEDDVIPNPHCILIRQFLGSP
Ga0307472_10023465413300032205Hardwood Forest SoilMNVQAADITGLGHQVSGYVQAFHRGGNDVDDAVGYGFQGLQAGNKCVRVADRMFLVRHPVPAKPVTREGILPFLAEDDAIPIPHCILIRQFLGSP
Ga0307472_10066501823300032205Hardwood Forest SoilVNLQAEDITGFGYQLGDHVRAFHDGGNDVDDIVVDHAFQGLQAGNKCVRFADRVSSVRDPGSAELMTREGVLPFLAEGDAIPNSHY


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.