Metagenome / Metatranscriptome Family F079125

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079125
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	51 residues
Representative Sequence	MPKENANPEAILEAIKKIDIVSELLEEKNKNNLKMIAEGKVSGGKQIGP
Number of Associated Samples	98
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.17 %
% of genes near scaffold ends (potentially truncated)	97.41 %
% of genes from short scaffolds (< 2000 bps)	93.97 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.621 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.586 % of family members)
Environment Ontology (ENVO)	Unclassified (39.655 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.172 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.26% β-sheet: 5.19% Coil/Unstructured: 54.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF06672	DUF1175	38.79
PF11974	bMG3	1.72
PF00072	Response_reg	0.86
PF10677	DUF2490	0.86
PF00027	cNMP_binding	0.86
PF16653	Sacchrp_dh_C	0.86
PF04392	ABC_sub_bind	0.86
PF06210	DUF1003	0.86
PF01050	MannoseP_isomer	0.86
PF02245	Pur_DNA_glyco	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3234	Uncharacterized conserved protein YfaT, DUF1175 family	Function unknown [S]	38.79
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	0.86
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.86
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.62 %
Unclassified	root	N/A	16.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.62 %
Unclassified	root	N/A	16.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.62 %
Unclassified	root	N/A	16.38 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	76.72 %
Unclassified	root	N/A	16.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.90 %
Unclassified	root	N/A	16.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.31 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.03 %
Unclassified	root	N/A	16.38 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.31 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.86 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.03 %
Unclassified	root	N/A	16.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.31 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.86 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.03 %
Unclassified	root	N/A	16.38 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.59 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.86 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.03 %
Unclassified	root	N/A	16.38 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.72 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.86 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.03 %
Unclassified	root	N/A	16.38 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.72 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.86 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_105586170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	774	Open in IMG/M
3300001380\|JGI1356J14229_10109846	All Organisms → cellular organisms → Bacteria → Acidobacteria	998	Open in IMG/M
3300004157\|Ga0062590_103001323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300005093\|Ga0062594_102221103	Not Available	594	Open in IMG/M
3300005171\|Ga0066677_10815601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300005330\|Ga0070690_100760615	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300005343\|Ga0070687_100256220	All Organisms → cellular organisms → Bacteria → Acidobacteria	1090	Open in IMG/M
3300005367\|Ga0070667_101373731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300005456\|Ga0070678_101876470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300005471\|Ga0070698_101176307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300005536\|Ga0070697_102079563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005545\|Ga0070695_100843083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300005556\|Ga0066707_10228678	All Organisms → cellular organisms → Bacteria → Acidobacteria	1208	Open in IMG/M
3300005558\|Ga0066698_10726406	Not Available	652	Open in IMG/M
3300005561\|Ga0066699_10620143	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300005575\|Ga0066702_10535635	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300005575\|Ga0066702_10673008	Not Available	618	Open in IMG/M
3300005586\|Ga0066691_10789329	Not Available	560	Open in IMG/M
3300005587\|Ga0066654_10502793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300005719\|Ga0068861_101141822	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300005764\|Ga0066903_103770733	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300006032\|Ga0066696_11123569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300006034\|Ga0066656_10635608	Not Available	689	Open in IMG/M
3300006173\|Ga0070716_100257821	All Organisms → cellular organisms → Bacteria → Acidobacteria	1191	Open in IMG/M
3300006196\|Ga0075422_10058660	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1410	Open in IMG/M
3300006358\|Ga0068871_100704643	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300006358\|Ga0068871_101729297	Not Available	593	Open in IMG/M
3300006755\|Ga0079222_10300210	All Organisms → cellular organisms → Bacteria → Acidobacteria	1048	Open in IMG/M
3300006791\|Ga0066653_10449305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300006794\|Ga0066658_10764637	Not Available	540	Open in IMG/M
3300006797\|Ga0066659_11363663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300006844\|Ga0075428_102742189	Not Available	502	Open in IMG/M
3300006845\|Ga0075421_101262898	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300006871\|Ga0075434_100154600	All Organisms → cellular organisms → Bacteria → Acidobacteria	2313	Open in IMG/M
3300006880\|Ga0075429_100198242	All Organisms → cellular organisms → Bacteria → Acidobacteria	1759	Open in IMG/M
3300006904\|Ga0075424_101567445	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300007255\|Ga0099791_10689293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300009012\|Ga0066710_100023060	All Organisms → cellular organisms → Bacteria → Acidobacteria	6983	Open in IMG/M
3300009038\|Ga0099829_10978124	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300009089\|Ga0099828_10561805	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300009089\|Ga0099828_11482961	Not Available	598	Open in IMG/M
3300009098\|Ga0105245_11595350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300009100\|Ga0075418_10600623	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300009137\|Ga0066709_104543826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300009174\|Ga0105241_10708324	All Organisms → cellular organisms → Bacteria → Acidobacteria	920	Open in IMG/M
3300009176\|Ga0105242_12587185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300010046\|Ga0126384_10359654	All Organisms → cellular organisms → Bacteria → Acidobacteria	1216	Open in IMG/M
3300010047\|Ga0126382_12489827	Not Available	504	Open in IMG/M
3300010303\|Ga0134082_10334290	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300010303\|Ga0134082_10407711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300010322\|Ga0134084_10170473	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300010362\|Ga0126377_11051759	All Organisms → cellular organisms → Bacteria → Acidobacteria	882	Open in IMG/M
3300010373\|Ga0134128_11375401	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300010373\|Ga0134128_13151504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300010397\|Ga0134124_10394870	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300010399\|Ga0134127_11737265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300010400\|Ga0134122_13056676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300010400\|Ga0134122_13326698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300011270\|Ga0137391_11563080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300011271\|Ga0137393_10387158	All Organisms → cellular organisms → Bacteria → Acidobacteria	1196	Open in IMG/M
3300012189\|Ga0137388_11389655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300012200\|Ga0137382_10264085	All Organisms → cellular organisms → Bacteria → Acidobacteria	1195	Open in IMG/M
3300012200\|Ga0137382_10459246	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300012205\|Ga0137362_10047313	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3489	Open in IMG/M
3300012205\|Ga0137362_10150951	All Organisms → cellular organisms → Bacteria → Acidobacteria	1986	Open in IMG/M
3300012205\|Ga0137362_10801495	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300012209\|Ga0137379_10005766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11702	Open in IMG/M
3300012209\|Ga0137379_11674396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300012210\|Ga0137378_10118783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2438	Open in IMG/M
3300012210\|Ga0137378_11828084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012351\|Ga0137386_10339955	All Organisms → cellular organisms → Bacteria → Acidobacteria	1080	Open in IMG/M
3300012356\|Ga0137371_10620299	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300012357\|Ga0137384_10456496	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M
3300012361\|Ga0137360_11559274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300012532\|Ga0137373_10012362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8809	Open in IMG/M
3300012923\|Ga0137359_10773002	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300012923\|Ga0137359_11117825	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300012925\|Ga0137419_11344012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300012925\|Ga0137419_11484104	Not Available	574	Open in IMG/M
3300012930\|Ga0137407_11546021	Not Available	631	Open in IMG/M
3300012944\|Ga0137410_10984319	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300012955\|Ga0164298_10934721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300012958\|Ga0164299_11263010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012986\|Ga0164304_10566106	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300012986\|Ga0164304_11426093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300014968\|Ga0157379_10724502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300015168\|Ga0167631_1049529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300015245\|Ga0137409_10426460	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300015373\|Ga0132257_100619487	All Organisms → cellular organisms → Bacteria → Acidobacteria	1339	Open in IMG/M
3300015373\|Ga0132257_101883760	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300015373\|Ga0132257_104555953	Not Available	504	Open in IMG/M
3300017792\|Ga0163161_10963749	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300018071\|Ga0184618_10122525	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300018431\|Ga0066655_10830007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300025893\|Ga0207682_10108083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1222	Open in IMG/M
3300025898\|Ga0207692_11082452	Not Available	531	Open in IMG/M
3300025930\|Ga0207701_10762435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	817	Open in IMG/M
3300025941\|Ga0207711_10121497	All Organisms → cellular organisms → Bacteria	2332	Open in IMG/M
3300026297\|Ga0209237_1119896	All Organisms → cellular organisms → Bacteria → Acidobacteria	1109	Open in IMG/M
3300026322\|Ga0209687_1177872	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300026507\|Ga0257165_1067323	Not Available	653	Open in IMG/M
3300026552\|Ga0209577_10146265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1864	Open in IMG/M
3300026552\|Ga0209577_10380605	All Organisms → cellular organisms → Bacteria → Acidobacteria	1026	Open in IMG/M
3300027691\|Ga0209485_1098694	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300027787\|Ga0209074_10194079	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300027862\|Ga0209701_10654480	Not Available	548	Open in IMG/M
3300027875\|Ga0209283_10660645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300027875\|Ga0209283_10688650	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300027909\|Ga0209382_11725881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300028380\|Ga0268265_12611448	Not Available	511	Open in IMG/M
3300028536\|Ga0137415_10883429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300030991\|Ga0073994_12315386	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300031231\|Ga0170824_102614087	Not Available	680	Open in IMG/M
3300031562\|Ga0310886_10221699	Not Available	1043	Open in IMG/M
3300031720\|Ga0307469_12011890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300032180\|Ga0307471_102027680	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.31%
Host-Associated	Host-Associated	20.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.59%
Plants	Host-Associated → Plants	20.69%
Aquatic	Environmental → Aquatic	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.03%
Roots	Host-Associated → Plants → Roots	1.72%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Sediment	Environmental → Aquatic → Sediment	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.21%
Loam	Environmental → Terrestrial → Soil → Loam	7.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.59%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.59%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.72%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1055861701	3300000955	Soil	MPTEDVNPAAILEAVKKIEVLAELLEERNQNNLKMIAEGKVSGGKQIGPYARVLTFAPG
JGI1356J14229_101098461	3300001380	Groundwater	MPKEDVRPEAILEALTKIDIVSELLDEKNKNNLKMIAEGKVSGG
Ga0062590_1030013231	3300004157	Soil	MPKVDTSPGAILEAVKKIDIVSELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLA
Ga0062594_1022211031	3300005093	Soil	MPKVNTNPEAILAAIKEIDILSELLEDRNKNNLKIILEGKEADGKRIGPYARL
Ga0066677_108156011	3300005171	Soil	MPRVSTIPEAILEAIKQIDVLSELLEDKNKNNLKMIAEGKEAGGKQIGPYARLLTYAPREVVMR
Ga0070690_1007606151	3300005330	Switchgrass Rhizosphere	MTRWQRVVPVMPKVETNPVAILEAVKKIDIVSELLDEKNKNNLKMIVEGKVSG
Ga0070687_1002562202	3300005343	Switchgrass Rhizosphere	MPKVNTSPDAILEAIKKVDVLSELLDDKNKNNLKMIVEGKVAGGKQIGPYA
Ga0070667_1013737312	3300005367	Switchgrass Rhizosphere	MPKANTNPEAILEAIKKIDVLSELLDEKNKNNLKMIAEGKIAGGKQIGPYARLLTFSPG*
Ga0070678_1018764702	3300005456	Miscanthus Rhizosphere	MPTANTSPDAILEAIKKIDVLSELLEDRNKNNLKMIAEGKVAGGKQIG
Ga0070698_1011763071	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPQENANPLAVLEAIKSTEIVAELLEEKNKNNLKMIVEGKLSGGKQIGPYARLLTYSPGD
Ga0070697_1020795631	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPKEDLRPEAILEALKRVDIVSELLDEKNKNNLKMIAEGKVSGGKQIGPYARL
Ga0070695_1008430831	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPQENANPLAVLEAIRSTEIVAELLEEKNKNNLKMIVEGKLSGGKQIGPYARLLSYSPG
Ga0066707_102286781	3300005556	Soil	MPKADVNPEAILEAVKKIDIVSELLDEKNKNNLKMIVEGKVSGGKQIGPYA
Ga0066698_107264061	3300005558	Soil	MPTANVNPEAILESVKKIDLLSELLDEKNKNNLKMIVEGKVSGGKQIG
Ga0066699_106201431	3300005561	Soil	MPTENTNPEAILEAIRKIDVLSELLEDKNKNNLKMIAEGKEAGGKQ
Ga0066702_105356351	3300005575	Soil	MPKVDTSPEAILEAVKKIDIVSELLDEKNKNNLKMIVEGKVSGGKQIGP
Ga0066702_106730082	3300005575	Soil	MPKVETNSEAILEAIAKIDVLSELLEEKNKNNLRMIAAGKEAGGKQIG
Ga0066691_107893291	3300005586	Soil	MPKEDSRPESILEAVKKIDIVAELLDEKNKNNLKMIVEGKV
Ga0066654_105027931	3300005587	Soil	MPKVEANPEAILEAIRKIDVLSELLEDKNKNNLKMIAEGKEAGGKQ
Ga0068861_1011418221	3300005719	Switchgrass Rhizosphere	MLKENTSSEAIVDAIKKIDLLSELLDDKNKNNLKMIAEGK
Ga0066903_1037707331	3300005764	Tropical Forest Soil	MPKENISPAAILEAIKRIDILSELLDDKNKNNLRMIAEGKEAGG
Ga0066696_111235691	3300006032	Soil	MPRVSSITEAILEAIKKIDVLSELLEDKNKNNLKMIAEGKEAGGKQIGPYARLLTYAPGEVVMREGDW
Ga0066656_106356082	3300006034	Soil	MPTENVNPEAILDAVKKIDLLSELLDEKNKNNLKMIVEGKVSGGKQI
Ga0070716_1002578211	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVETSPEAILEAIKKIDVLSELLEDKNKNNLKMIAEGKEAGGKQIGP
Ga0075422_100586601	3300006196	Populus Rhizosphere	MPEANTNPEAILAAIKEIDILSELLEDRNKNNLKIILEGKEADGKRIGPYARLLTYA
Ga0068871_1007046432	3300006358	Miscanthus Rhizosphere	MPKANTNPDAILAAIKEIDILSELLEDRNKNNLKMIVEGKESDGKRIGP
Ga0068871_1017292971	3300006358	Miscanthus Rhizosphere	MPEVNTNPEAILAAIKEIDILSELLEDRNKNNLKIIVEGREA
Ga0079222_103002103	3300006755	Agricultural Soil	MPKVDTTPAAILEAVRKIDIVSELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLAYEPGETIMR
Ga0066653_104493051	3300006791	Soil	MPKVNTSPEAILEAIKKIDILSELLGDKNKNNLKMIAEGKVAGGKQI
Ga0066658_107646372	3300006794	Soil	MPKEDVRPESILEAVKKIDIVAELLDEKNKNNLKMIVEG
Ga0066659_113636631	3300006797	Soil	MPKVETNPEAILEAVRKIDVLSELLEDKNKNNLRMIAEGKEAGGKQIGPYARLLTYSPG
Ga0075428_1027421892	3300006844	Populus Rhizosphere	MPEANTNPEAILAAIKEIDILSELLEDRNKNNLKIILEGKE
Ga0075421_1012628983	3300006845	Populus Rhizosphere	MPKVDTTPEAILEAVKRIDIVSELLDEKNKNNLKMIAEGKVSGGKQIGPY
Ga0075434_1001546001	3300006871	Populus Rhizosphere	MPKVDTSPDAILEAVKKIDIVSELLDEKNKNNLKL
Ga0075429_1001982424	3300006880	Populus Rhizosphere	MPKVDTTPEAILEAVKKIDIVSELLDEKNKNNLKMIAEGKVSGGKQIGPYARLLTYEPGEAIMAEGE
Ga0075424_1015674452	3300006904	Populus Rhizosphere	MPRENTTPDAILEAIRKIDILSELLEDKQKNNLKMIAEGKEA
Ga0099791_106892931	3300007255	Vadose Zone Soil	MPRENTTPDAILEAIRKIDILSELLEDKQKNNLKMIAEGKEAGGKQ
Ga0066710_1000230604	3300009012	Grasslands Soil	MPKADVNPEAILEAVKKIDIVSELLDEKNKNNLKMIV
Ga0099829_109781242	3300009038	Vadose Zone Soil	MPKEDVRPEAILEALKKVDIVSELLDEKNKNNLKMIADG
Ga0099828_105618051	3300009089	Vadose Zone Soil	MPKENANPDAILEAIKKVDIVSELLEEKNKNNLKMIAEGKV
Ga0099828_114829612	3300009089	Vadose Zone Soil	MPKEDVRPEAILEALKKIDIVSELLDEKNKNNLKM
Ga0105245_115953501	3300009098	Miscanthus Rhizosphere	MPKANTNPEAILEAIKKIDVLSELLDEKNKNNLKMIAEGKIAGGKQIGPYARLLTFSPGEVIMHE
Ga0075418_106006232	3300009100	Populus Rhizosphere	MPKVNTNPEAILAAIKEIDILSELLEDRNKNNLKIILEGKEADGKRIG
Ga0066709_1045438262	3300009137	Grasslands Soil	MPRENTTPEAILEAIKKIDILSELLEDKQKNNLKMIAEGKEAGGKQIGRSARLLTYAPGEAVMREADWRGH
Ga0105241_107083241	3300009174	Corn Rhizosphere	MTRWQRVVPIMPKVDTSPDAILEAVKKIDIVSELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLGYDPGETIMREGEW
Ga0105242_125871851	3300009176	Miscanthus Rhizosphere	MPTANTSPDAILEAIKKIDVLSELLDDKNKNNLKMIAEGKVAGGKQIGP
Ga0126384_103596542	3300010046	Tropical Forest Soil	MPKVDTTPEAILEAVKKIDIVSELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLACEPGETIM
Ga0126382_124898271	3300010047	Tropical Forest Soil	MPKVDTSPDAILEAVKKIDIVSELLDEKNKNSLKMIVEGKVSGGKQI
Ga0134082_103342902	3300010303	Grasslands Soil	MPKEDVRPESILEAVKKIDIVAELLDEKNKNNLKMIVEGKVSGGKQ
Ga0134082_104077111	3300010303	Grasslands Soil	MPRENTTPEAILEAIRKIDILSELLEDKQKNNLKMIAEGKEAGGKQIGPYARLLTYAPGEAVMREGDW
Ga0134084_101704732	3300010322	Grasslands Soil	MPKVNTSPEAILEAIKKIDILSELLGDKNKNNLKMIAEGKVAGGKQIGPYARLL
Ga0126377_110517592	3300010362	Tropical Forest Soil	MPKVDTSPDAILEAVKKIDIVSELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLAYEPGEVIMREGEW
Ga0134128_113754012	3300010373	Terrestrial Soil	MPRADTSPEAILEAVKRIDIVSELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLTFEPNEVIMREG
Ga0134128_131515042	3300010373	Terrestrial Soil	MPKANTNPEAILEAIKKVDVLSELLDDKNKNNLKMIAEGKVA
Ga0134124_103948702	3300010397	Terrestrial Soil	MPEVNTNPEAILAAIKEIDILSELLEDRNKNNLKIIVEG
Ga0134127_117372651	3300010399	Terrestrial Soil	MPKVDTTPEAVLAPVKKIDIVAELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLTCDPGETIMTE
Ga0134122_130566761	3300010400	Terrestrial Soil	MPKANTSPDAILEAIKKIDVLSELLDEKNKNNLKMIAEGKIAGGKQIGPYARLLTFSPGEVIMHEGDWGG
Ga0134122_133266981	3300010400	Terrestrial Soil	TSNKSTDQRSPREMLKENTSSEAIVDAISKIDLLSELLDDKNKNNLKMIAEGKVAGGKQIGPYARVLSFSPGDVIMS*
Ga0137391_115630801	3300011270	Vadose Zone Soil	MPKENANPEAILDAIKRIEIVAELVEEKNKNNLKMIVEGKVSGGKQIGPYARLLTY
Ga0137393_103871581	3300011271	Vadose Zone Soil	MPKEDVRPEAILEALKKVDIVSELLDEKNKNNLKMIAEGKVSGGKQIGPYARLL
Ga0137388_113896552	3300012189	Vadose Zone Soil	MPKENANPDAILEAIKKVDIVSELLEEKNKNNLKMIAEGKVAGGKQIG
Ga0137382_102640851	3300012200	Vadose Zone Soil	MPKESLNPDAILEAIKKIEIVSELLEDKNKNNLKMI
Ga0137382_104592462	3300012200	Vadose Zone Soil	MPKENTNPEAILEAIQSVEIVSELLDDKNKNNLKMIAEGKVSGGK*
Ga0137362_100473131	3300012205	Vadose Zone Soil	MPKEDLRPEAILEALKKVDIVSELLDEKNKNNLKMIAEGK
Ga0137362_101509514	3300012205	Vadose Zone Soil	MPKENANPDAILEAIKKVEILSELLEEKNKNNLKKIAEGKVSGGKQIGPYARLLT
Ga0137362_108014952	3300012205	Vadose Zone Soil	MPTENANRETILDAIKRIEIVTELLEEKNKNNLKMIVEG
Ga0137379_100057667	3300012209	Vadose Zone Soil	MPIENRNPEAMLEAVKRIDIVSELLDDKNKNNLKMVVEGKVSGGKQIGPYARLLAYSPGEKIMREG
Ga0137379_116743961	3300012209	Vadose Zone Soil	MPKEDRTPQAILEAVKKINIISELLDDKNKNNLKMVVEGKVSGGKQIGPYARLLAYSPGEKIMREG
Ga0137378_101187833	3300012210	Vadose Zone Soil	MPIENRNPEAMLEAVKRIDIVSELLDDKNKNNLKMVVEGKVSGGKQIGPYARLLAYSPGE
Ga0137378_118280842	3300012210	Vadose Zone Soil	MPRENTNPEAIVEAIKKIDVLSELLEDKNKNNLKMIAEGKEAGGKQIGPYARLLTYKPGEVVMNEGDWGG
Ga0137386_103399551	3300012351	Vadose Zone Soil	MPRESTIPEAILEAIKKIDVLSELLEDKNKNNLKMIAEGKE
Ga0137371_106202991	3300012356	Vadose Zone Soil	MPKEARTPQAILEAVKKIEIISELLDDKNKNNLKMVVEGKV
Ga0137384_104564962	3300012357	Vadose Zone Soil	MPTENTNPQDILEAIKKIDVLSELLEDKNKNNLKMIA
Ga0137360_115592741	3300012361	Vadose Zone Soil	MPTENANRETILDAIKRIEIVAELLEEKNKNNLKMIVEGKVSGGKQIGPYARLLTYSP
Ga0137373_100123626	3300012532	Vadose Zone Soil	MPIENRNPEAMLEAVKRIDIVSELLDDKNKNNLKMVVEGKVSGGKQIGPYAR
Ga0137359_107730021	3300012923	Vadose Zone Soil	MPKEDLRPEAILQALKKVDIVSELLDEKNKNNLKMIAVGKVSGGKQIGPYARL
Ga0137359_111178252	3300012923	Vadose Zone Soil	MPTENANRETILDAIKRIEIVTELLEEKNKNNLKMIVEGKVAGG
Ga0137419_113440122	3300012925	Vadose Zone Soil	MPKENTNPEAILEAIQSVEIVSELLDDKNKNNLKMIAEGKVSGGKQIGPYARLLTYQ
Ga0137419_114841042	3300012925	Vadose Zone Soil	MPKEDLRPEAILEALKKVDIVSELLDEKNKNNLKMIAEGKVSGGK
Ga0137407_115460212	3300012930	Vadose Zone Soil	MPTENVNPEAILEAVKKIDLLSELLDEKNKNNLKMIVEGKVSGG
Ga0137410_109843192	3300012944	Vadose Zone Soil	MPKENTNPAAVLEAIKKVEIVSELLDDKNKNNLKMIA
Ga0164298_109347212	3300012955	Soil	MPKENANPEAILEAIKKVEIVSELLDDKNKNNLKMIAEGKVAGGKQIGPYARLLTYRPGEVIMKEGDWGG
Ga0164299_112630101	3300012958	Soil	MTRWQRVVPVMPKVETNPVAILEAVKKIDIVSELLEEKNKNNLKMIVEGKISGGKQIGPYARLL
Ga0164304_105661061	3300012986	Soil	MPKENANPEAILEAIKKVEIVSELLDDKNKNNLKMIAEGKVAGGKQIGPYARLLTY
Ga0164304_114260931	3300012986	Soil	MPKANTSPDAILEAIKKIDVLSELLDEKNKNNLKMIAEGKIAGGKQIGPYARLLTFSP
Ga0157379_107245021	3300014968	Switchgrass Rhizosphere	MPKANTNPEAILAAIKEIDILSELLEDKNKNNLRIIVEGKEADGKRIGPYARLLTYAPG
Ga0167631_10495291	3300015168	Glacier Forefield Soil	MPKENSNPDAILEAIKKVEIVSELLEDKNKNNLKMIAEGKVSGGKQIGPYARLL
Ga0137409_104264601	3300015245	Vadose Zone Soil	MPKEDLRPEAILEALKKVDIVSELLDDTNKNNLKMIDEGKISGGKQLGPSGRLLT
Ga0132257_1006194871	3300015373	Arabidopsis Rhizosphere	MPKVDTTPAAILEAVRKIDIVSELLDEKNKNNLKMIVEGKLSGGKQIGPYARLLAYE
Ga0132257_1018837601	3300015373	Arabidopsis Rhizosphere	MPKADTSPEAILAAVQRIDIVSELLDEKNKSSLKLIAGGRWTGG
Ga0132257_1045559532	3300015373	Arabidopsis Rhizosphere	MPKANTNPEAILAAIKEIDILSELLEDKNKNNLKIIVEGKEA
Ga0163161_109637492	3300017792	Switchgrass Rhizosphere	MTRWQRVVPVMPKVETNPVAILEAVKKIDIVSELLEEKNKNNLKMIVEGK
Ga0184618_101225251	3300018071	Groundwater Sediment	MPKADAKPEAILEAVKQIDIVSELLDDKNKNNLKMIVEGKVSGGKQIGPYARLLTYEPDEVI
Ga0066655_108300072	3300018431	Grasslands Soil	MPKEDVRPESILEAVKKIDIVAELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLTYASIGPDLFAAGNLAL
Ga0207682_101080831	3300025893	Miscanthus Rhizosphere	MPEANTNPEAILAAINEIDILSELLEDRNKNNLKIIVE
Ga0207692_110824522	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPTANTSPDAILEAIKKIDVLSELFDDKNKNNLKM
Ga0207701_107624352	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPKADTSPEAILAAVQRIDIVSELLDEKNKNNLKMIAEGKVSGGKQIGPYARLLTYEPKEVIMREGE
Ga0207711_101214974	3300025941	Switchgrass Rhizosphere	MPKANTNPEAILAAIKEIDILSELLEDKNKNNLRIIVEGKEADGKRIGPYARLLTYAPGEVLMNEGDWGG
Ga0209237_11198961	3300026297	Grasslands Soil	MPKEDRNPDAILGAVKKIDIVSELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLVYSP
Ga0209687_11778721	3300026322	Soil	MPKVETNPEAILEAIKKIDVLSELLEDKNKNNLRMIAEG
Ga0257165_10673232	3300026507	Soil	MPKEDLRPEAILEALKKVDIVSELLDEKNKNNLKMIAEGKVSGGKQIGP
Ga0209577_101462651	3300026552	Soil	MPKEDSRPESILEAVKKIDIVAELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLTYSPGEVIMN
Ga0209577_103806051	3300026552	Soil	MPKVETNPEAVLEAIKKIDVLSELLEDKNKNNLRMIAEGKE
Ga0209485_10986942	3300027691	Agricultural Soil	MPKVDTTPEAILEAVKKIDIVSELLDEKNKNNLKMIVEGKVSGGKQIGPYARLLTYDAGEVIMTE
Ga0209074_101940792	3300027787	Agricultural Soil	MPKVDTTPAAILEAVRKIDIVSELLDEKNKNNLKMIVEG
Ga0209701_106544801	3300027862	Vadose Zone Soil	MPNEDVRPEAILEALKKVDIVSELLDEKNKNNLKM
Ga0209283_106606451	3300027875	Vadose Zone Soil	MPKEDVRPEAILEALKKVDIVSELLDEKNKNNLKMIADGKVSGGKQIGPYARLLTYSA
Ga0209283_106886501	3300027875	Vadose Zone Soil	MPKEDVRPEAILEALKKIDIVSELLDEKNKNNLKMIAEGKVSGGK
Ga0209382_117258811	3300027909	Populus Rhizosphere	MPKVDTTPEAILEAVKRIDIVSELLDEKNKNNLKMIAEGKVSGGKQIGPYAR
Ga0268265_126114481	3300028380	Switchgrass Rhizosphere	MPKANTNPEAILAAIKEIDILSELLEDKNKNNLKIIVEGKEADGK
Ga0137415_108834291	3300028536	Vadose Zone Soil	MPKEDLRPEAILDALKKVDIVSELLDEKNKNNLKMIAEGKVSGGKQIGPYARLLTYL
Ga0073994_123153861	3300030991	Soil	MPKENANPEAILEAIKKIDIVSELLEEKNKNNLKMIAEGKVSGGKQIGP
Ga0170824_1026140871	3300031231	Forest Soil	MPKANTNPEIILAAIKEIDILSELLEDRNKNNLKIIVEGKEANGKQIGPYARL
Ga0310886_102216992	3300031562	Soil	MPEANTNPEAILAAIKEIDILSELLEDRNKNNLRIILEGK
Ga0307469_120118902	3300031720	Hardwood Forest Soil	MSRENSNPEAILEAIKKVDIVSELLEDKNKNNLKMIAEGKVSGGKQIGPYARLLTFA
Ga0307471_1020276801	3300032180	Hardwood Forest Soil	MPKVETSPEAILEAIKKIDVLSELLEDKNKNNLKMIAEGKEAGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079125

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences