Metagenome / Metatranscriptome Family F079124

Overview

Basic Information

• Family ID: F079124
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 116
• Average Sequence Length: 40 residues
• Representative Sequence: VPEPKKLVLIEGADHFFEGRLRELRETIEAWVKEAVNS
• Number of Associated Samples: 108
• Number of Associated Scaffolds: 116

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 2.59 %
• % of genes from short scaffolds (< 2000 bps): 2.59 %
• Associated GOLD sequencing projects: 106
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (97.414 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.655 % of family members)
• Environment Ontology (ENVO): Unclassified (26.724 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (54.310 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 31.82%
  β-sheet: 0.00%
  Coil/Unstructured: 68.18%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13660	DUF4147	73.28
PF04402	SIMPL	2.59
PF00487	FA_desaturase	1.72
PF01694	Rhomboid	1.72
PF00903	Glyoxalase	1.72
PF00072	Response_reg	0.86
PF01346	FKBP_N	0.86
PF01797	Y1_Tnp	0.86
PF12695	Abhydrolase_5	0.86
PF02661	Fic	0.86
PF12706	Lactamase_B_2	0.86
PF00005	ABC_tran	0.86
PF01243	Putative_PNPOx	0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	2.59
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	2.59
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	2.59
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	1.72
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	1.72
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	1.72
COG0545	FKBP-type peptidyl-prolyl cis-trans isomerase	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.86

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.41 %
All Organisms	root	All Organisms	2.59 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.41 %
cellular organisms	root	All Organisms → cellular organisms	2.59 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.59 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.41 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.59 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.41 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.72 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.72 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300010337|Ga0134062_10045989	All Organisms → cellular organisms → Bacteria → Acidobacteria	1765
3300012201|Ga0137365_10941592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629
3300012210|Ga0137378_11155111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.66%
Host-Associated	Host-Associated	10.34%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.76%
Plants	Host-Associated → Plants	10.34%
Aquatic	Environmental → Aquatic	6.90%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.03%
Freshwater	Environmental → Aquatic → Freshwater	6.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Peat	Environmental → Terrestrial → Peat	1.72%
Roots	Host-Associated → Plants → Roots	0.86%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.62%
Loam	Environmental → Terrestrial → Soil → Loam	13.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.45%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.86%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental
3300029945	I_Bog_N2 coassembly	Environmental
3300030524	II_Palsa_N3 coassembly	Environmental
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A001DRAFT_10667041	3300000893	Forest Soil	SLAEPKRLVIIEAADHFFEGRLREMRETVEGWAKEALTL*
Ga0062388_1000068551	3300004635	Bog Forest Soil	LVQTLPEPKKLVLIEAADHFFEGRLKELRETIEAWVREVLVAPTPKAES*
Ga0070668_1014960252	3300005347	Switchgrass Rhizosphere	GLVHSIPGPKKLVLVPGADHFFEGRLREMRDAIEQWVGEAVSL*
Ga0070688_1013143342	3300005365	Switchgrass Rhizosphere	DKAVGAMAEPKKLVIIEAGDHFFEGRLRELRDAIETWVRETIVS*
Ga0070713_1008045392	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EALVASLPDPKRLVLIEGGDHFFEGRLREMRETIEVWVKEAVSA*
Ga0066687_100879822	3300005454	Soil	MVSSLPEPKKLVIIPAADHFFEGRLREMRETVETWAREVLS*
Ga0066687_108873541	3300005454	Soil	DSVAPPKELVLIEAGDHFFEGRLAELRRTIENWVRNAVLQQVAH*
Ga0070697_1000627545	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	SVPEPRRLVLIEGADHFFEGRLSELRETIESWIREVVLHG*
Ga0070731_107271872	3300005538	Surface Soil	EQVIQSLPEPKKLVLIEGGDHFFAGRLRELRETIEEWVRQVLGK*
Ga0066701_109470232	3300005552	Soil	LSEPKKLIIVEGADHFFEGRMRELRETIEAWLRELLST*
Ga0066670_104300842	3300005560	Soil	PKKLVIIEGADHFFEGRLHELRNAVESWIKEAQLA*
Ga0066699_104176832	3300005561	Soil	VNSLADPKKLVLIAGADHFFEGRLRELREKIENWVREFLVG*
Ga0070761_104205401	3300005591	Soil	EPKKLVLIEGADHFFEGRLRELRETIESWVKEAVNH*
Ga0070762_110679892	3300005602	Soil	PEPKKLVLIEGGDHFFEGRLREMREAVEAWVGTVRISC*
Ga0068862_1015679181	3300005844	Switchgrass Rhizosphere	KAVGAMAEPKKLVIIEAGDHFFEGRLRELRDAIETWVRETIVS*
Ga0070716_1002972852	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	KKLVVIEGADHFFEGRLRELREAIEAWVKEQIVA*
Ga0070765_1012936211	3300006176	Soil	LIQGADHFFEGRLRELREAIEGWVRQEIVRDLSL*
Ga0097621_1000037501	3300006237	Miscanthus Rhizosphere	KGLIHSIPGPKKLILVPGADHFFEGRLREMRDAIEQWVSEAVNL*
Ga0079222_109074262	3300006755	Agricultural Soil	VASLPEPKRLLIIEGADHFFAGRLAELRKAIEEWVKEQVVVG*
Ga0075425_1007026501	3300006854	Populus Rhizosphere	EPKKLVMIESADHFFEGRLREMRDAIETWVRETGLG*
Ga0075426_108575971	3300006903	Populus Rhizosphere	KKLVIIEGADHFFEGRLHELRNAVESWIKEAQLG*
Ga0075436_1001301821	3300006914	Populus Rhizosphere	PKRLLIIEGADHFFAGRLAELRKAIEEWVKEQVVVG*
Ga0111538_123611611	3300009156	Populus Rhizosphere	AKLQEMVDALPEPRTLVFIESADHFFEGRLREMRESIEEWLRKTIISPP*
Ga0116218_14177672	3300009522	Peatlands Soil	LPEPKKLVIVEGADHFFEGRLRELREGIESWIKERIPD*
Ga0126374_105470042	3300009792	Tropical Forest Soil	ALVQSLAEPKKLVITDAADHFFEGRLREMRESVQGWAKEILQM*
Ga0126384_119327122	3300010046	Tropical Forest Soil	SVAEPKKLVTIGAADHFFEGRLREMREVVESWVKETVLQGEQ*
Ga0134082_100535873	3300010303	Grasslands Soil	PKKLIIVEGADHFFEGRMRELRETIEAWLRELLST*
Ga0134067_100397133	3300010321	Grasslands Soil	PKKLIIVEGADHFFEGRMRELRETIEAWLRECLST*
Ga0134062_100459891	3300010337	Grasslands Soil	ILSEPKKLIIVEGADHFFEGRMRELRETIEAWLRELLST*
Ga0126376_103945291	3300010359	Tropical Forest Soil	ELAHSAAGPKQLVIIDSADHFFEGRLREMREAMENWIRETLDLPS*
Ga0134126_118752001	3300010396	Terrestrial Soil	PEPKKLVIIESADHFFEGRLREMRESIEGWIQEARIV*
Ga0150983_158068291	3300011120	Forest Soil	KKLVIIEAADHFFEGRLREMREAVEGWVGETVRP*
Ga0150983_164809732	3300011120	Forest Soil	KKLVLIEGADHFFEGRLRELREAIEGWVRQEIVRDLSL*
Ga0137389_107390872	3300012096	Vadose Zone Soil	FVKSLPEPRKLVIIEGADHFFEGRVRELRETIEGWVREVVRLV*
Ga0137364_109646811	3300012198	Vadose Zone Soil	AELPEPKKLVIIEAADHFFEGRLREMRDVVEGWARDAVSNTRA*
Ga0137365_109415921	3300012201	Vadose Zone Soil	EPKKLIIVEGADHFFEGRMRELRETIEAWLRELLST*
Ga0137362_111522492	3300012205	Vadose Zone Soil	PEPKKLVLIEGADHFFEGRLRELRETIEVWVRQEIVRDPTL*
Ga0137378_111551112	3300012210	Vadose Zone Soil	LEKLVAILSEPKKLIIVEGADHFFEGRMRELRETIEAWLRELLST*
Ga0137378_118630742	3300012210	Vadose Zone Soil	LEKLVAILSEPKKLIIVEGADHFFEGRMRELRETIEAWLRECLST*
Ga0137387_101080111	3300012349	Vadose Zone Soil	KKLVIIDSADHFFEGRLREMREAIEAWIKDTIGT*
Ga0137367_101621151	3300012353	Vadose Zone Soil	LLSSLPEPKTLVIIDSADHFFEGRLREMRDAIAAWIREKGLA*
Ga0137360_102765263	3300012361	Vadose Zone Soil	VAILSEPKKLIIVEGADHFFEGRMRELRETIEAWLRECLST*
Ga0137390_116845891	3300012363	Vadose Zone Soil	QLEALVRTVSSPKKLVLIAGGDHFFEGRLRELRESIEQWVGEAVIP*
Ga0137359_104295002	3300012923	Vadose Zone Soil	SVPEPKKLVVIEGADHFFEGRLRELRDTIESWVRSEIVHD*
Ga0137419_102219311	3300012925	Vadose Zone Soil	PEPKKLIIIEAADHFFEGRLREMRDAVEGWTRNVVSNTW*
Ga0137404_108363381	3300012929	Vadose Zone Soil	LKALVNSVPEPKKLVLIAGADHFFEGRLREMRECVERWVGEAVNL*
Ga0164299_101064801	3300012958	Soil	HSIPGPKKLVLIPGADHFFEGRLREMRDAIEQWVSEAVNL*
Ga0164301_101519733	3300012960	Soil	LPEPKKLVMIEAADHFFEGRLRAMRETVENWTRETLHL*
Ga0157372_106059293	3300013307	Corn Rhizosphere	QSLPEPKKLVLIEAADHFFEGRLREMRDAIEPWVREITA*
Ga0137412_106658991	3300015242	Vadose Zone Soil	VPEPKKLVVIEGADHFFEGRLRELRETIEGWVRQEIVREVSL*
Ga0132255_1013299371	3300015374	Arabidopsis Rhizosphere	DALPKPKRLVLIESADHFFEGRLREMRESIEEWLRKTIVSPP*
Ga0182036_100321974	3300016270	Soil	FASLSEPKKLVIIPAADHFFEGRLREMRDAVETWTRETLNTPSSL
Ga0182032_119352242	3300016357	Soil	VAPLPGLKKLVIVEAADHFFEGRLREMREEVEGWAREVVREL
Ga0182040_100464254	3300016387	Soil	SEPKKLVIIPAADHFFEGRLREMRDAVETWTRETLNTPSAL
Ga0134069_10078735	3300017654	Grasslands Soil	PKKLIIVEGADHFFEGRMRELRETIEAWLRECLST
Ga0187818_101651091	3300017823	Freshwater Sediment	EPKKLVLIEGADHFFEGRLRELREAIEAWVRQAAAG
Ga0187801_104718502	3300017933	Freshwater Sediment	SVPEPKKLIVIEGADHFFGGRLRELRKAIEAWLREQVALTA
Ga0187781_104807681	3300017972	Tropical Peatland	LVVIDGADHFFEGRLRELRETIEGWVRQEILREVSL
Ga0187782_114230081	3300017975	Tropical Peatland	SLSQPKRLVLIEGADHFFEGRLRELREVIEGWIREVIVEEPRSS
Ga0187878_10084241	3300018005	Peatland	LVVIQGADHFFEGRLRELREAIESWVREEIVRDVSL
Ga0187889_103642992	3300018023	Peatland	LPEPKKLVVIEGADHFFEGRLRELREAIATWVEEEILQQASL
Ga0187875_103215851	3300018035	Peatland	EPKKLVMIQGADHFFEGRLRELRDAIEVWIKESIPR
Ga0187862_101366941	3300018040	Peatland	KKLVVIEGADHFFEGRLRELREAIATWVEEEILRQASL
Ga0187772_102779182	3300018085	Tropical Peatland	KLIRIEAADHFFEGRLKEMRETIEAWLRDFLATDQRPPGD
Ga0187769_109294481	3300018086	Tropical Peatland	EPKKLVVIDGGDHFFAGRLRELRGAIESWVREQVIKTP
Ga0066667_121992132	3300018433	Grasslands Soil	EPKKLVFVEGADHFFEGRLREVRATIESWVREEILG
Ga0066662_101024531	3300018468	Grasslands Soil	ELAATFPEPKKLVIIEGADHFFEGRLRELRDAIESWLKQAKLT
Ga0193728_10243985	3300019890	Soil	ASAAEAKKLVVIEGADHFFEGRLRELRETIEGWVRQEIERQGSL
Ga0193755_11291141	3300020004	Soil	VRSVSDPKKLILIAGGDHFFEGRLRELREAIEQWVGEAVIP
Ga0210403_105509051	3300020580	Soil	LVTSLPEPKKLVLIQGADHFFEGRLRELREAIEGWVRQEIVRDLSL
Ga0210405_106707611	3300021171	Soil	LPEPKKLVMIQGADHFFEGRLRELREAIEAWIKESIPH
Ga0210408_105491371	3300021178	Soil	LVRTVSSPKKLVLIAGGDHFFEGRLRELRESIEQWVGEAVIP
Ga0210384_114483771	3300021432	Soil	ALVASVPEPKKLVLIEAGDHFFEGRLRELREAIEAWVKDEVTHSA
Ga0210384_115622741	3300021432	Soil	PEPKKLVIVEGADHFFEGCLRELREAIEMWVREVLF
Ga0210390_110790741	3300021474	Soil	KKLVVIEGADHFFEGRLRELREAIESWVRQRIVGKPSI
Ga0210398_105638061	3300021477	Soil	ALVASVPEPKKLVIIEGADHFFEGRLRELREAIETWMKEAI
Ga0210402_103413523	3300021478	Soil	LPEPKRLHIVEGADHFFAGRLEEVGATITDWLAQT
Ga0210402_106807852	3300021478	Soil	QLPEPKKLVIIPAADHFFEGRLREMREAVETWTRETLASQVR
Ga0210402_111316271	3300021478	Soil	TVSSPKKLVLIAGGDHFFEGRLRELRESVEQWVGEAVIP
Ga0224570_1030722	3300022730	Rhizosphere	IPEPKKLVLIEGGDHFFEGRLRELRETIEAWLKEAVG
Ga0207667_101148244	3300025949	Corn Rhizosphere	RVLLGKAVGAMAEPKKLVIIEAGDHFFEGRLRELRDAIETWVRETIVS
Ga0207640_106607271	3300025981	Corn Rhizosphere	SERKKLVIIESADHFFEGRLKEMREATEAWVKEMIQ
Ga0209234_100079212	3300026295	Grasslands Soil	LEKLVAILSEPKKLIIVEGADHFFEGRMRELRETIEAWLRECLST
Ga0209239_10947903	3300026310	Grasslands Soil	AILSEPKKLIIVEGADHFFEGRMRELRETIEAWLRELLST
Ga0209686_10917542	3300026315	Soil	ENLGANVPEPKKLVFVEGADHFFEGRLREVRATIESWVREEILG
Ga0209471_13256332	3300026318	Soil	PEPKKLVLIEGADHFFAGRLRELREGIEKWAKETVAI
Ga0209687_11037131	3300026322	Soil	PEPKKLLLIEGADHFFAGRLRELREAIEKWVKEVVAI
Ga0257176_10569982	3300026361	Soil	PKKLVLVGGADHFFEGRLREMRETVVQWVGDVVNL
Ga0179587_103814251	3300026557	Vadose Zone Soil	ALVAGLPEPKKLIIIEAADHFFEGRLREMRDAVEGWTRNVVSNTW
Ga0207781_10234172	3300026890	Tropical Forest Soil	VASTPEPKKLVTIEGADHFFEGRLRELRDAIETWTKEVTRSA
Ga0208603_10077791	3300027109	Forest Soil	PEPKKLVLIAGADHFFAGRLRELREAIETWVTETRT
Ga0209524_11374452	3300027521	Forest Soil	PKKLVLIEGADHFFEGRLRELREAIESFIREQVVV
Ga0209009_11963901	3300027667	Forest Soil	PKKLVLIAGADHFFEGRLREMRETVEQWVGEAVNL
Ga0209626_10220732	3300027684	Forest Soil	VVAELPEPKKLVIVEGADHFFEGRLLELRESIEGWIKESVHA
Ga0209248_101855882	3300027729	Bog Forest Soil	EALVASAPEPKKLVLIEGGDHFFEGRLRELRETIEGWVKEAISCQPLAIS
Ga0209579_100689601	3300027869	Surface Soil	IPEPKKLVLIEGADHFFEGRLREMRESMEAWVKEAVTS
Ga0209283_100144846	3300027875	Vadose Zone Soil	QGLVESLSAPRKLVLIEGADHFFEGRLRELREAIETWVREVVRLV
Ga0209380_101237771	3300027889	Soil	VLIEGADHFFEGRLRELRETIEVWVRQAIVQDQSL
Ga0137415_104025031	3300028536	Vadose Zone Soil	ATRLRALVGSVPEPKKLVLIAGGDHFFEGRLRELREIVEQWVGDVVNL
Ga0307312_108621552	3300028828	Soil	SAQLKVLVGSLPQPKTLVLIGGADHFFEGRLRELRETIEQWLADAVNL
Ga0311330_112211761	3300029945	Bog	IASLPEPKKLVVIEGADHFFEGRLRELRETIESWVREEIVRAMSL
Ga0311357_101582891	3300030524	Palsa	KKLVVIEGADHFFEGRLRELRDAIEDWVRQVIVRDPSL
Ga0075374_105050291	3300030855	Soil	KKLVLIEGADHFFEGRLREMRETIEAWVKEADGCL
Ga0265765_10016163	3300030879	Soil	VVIEGADHFFEGRLRELREAIEGWVRETIVEGPSI
Ga0170834_1124318711	3300031057	Forest Soil	EPKKLVVIEGADHFFEGRLRELRETIEEWVRQTVIGNPAV
Ga0310686_1007732552	3300031708	Soil	VPEPKKLVLIEGADHFFEGRLRELRETIEAWVKEAVNS
Ga0318492_102754831	3300031748	Soil	AALVACLPEPKELVIIEAADHFFEGRLREMREAIEHWVRDVGLAV
Ga0307475_104207291	3300031754	Hardwood Forest Soil	EPKKLVLIAGADHFFEGRLRELRETIVEWIGDAVNL
Ga0307471_1033353721	3300032180	Hardwood Forest Soil	PKPRKLVLIQGADHFFEGRLREMRETVEQWVGDAVNL
Ga0307471_1039530851	3300032180	Hardwood Forest Soil	KLEALVASVSQPKKLIVIEGADHLCEGRLRELREAIEVWVRQQIVREVSA
Ga0335079_110128432	3300032783	Soil	GPCKLAFIEGADHFFEGRLRELREVIEAWVRESVLVIGKAV
Ga0335079_117910821	3300032783	Soil	KKLVLIEAADHFFEGRLREMRTAIEDWIRETLPQPL
Ga0335080_101166264	3300032828	Soil	AKLQALVHSLPEPRKLELIEGADHFFDGHLREMREAVEKWVKGVL
Ga0335070_101270234	3300032829	Soil	GMVDALPEPRKLVIIEGADHFFEGRLRELREAIENWIKQTVLRRADS
Ga0335075_116683762	3300032896	Soil	PKKLVIIEGADHFFEGRLHELREAIEKWIRETLSR
Ga0370483_0249051_478_603	3300034124	Untreated Peat Soil	LAEALPEPKKLVIIEGGDHFFEGRLQAMREAIETWVSETLR