Metagenome / Metatranscriptome Family F079057

Basic Information
Family ID	F079057
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	63 residues
Representative Sequence	TYEGSASTDITKPVSLKWKILSGTGKYKGIKGSGTCSGKFNADGSADWECTGTYSTGK
Number of Associated Samples	90
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.86 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (26.724 % of family members)
Environment Ontology (ENVO)	Unclassified (56.034 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.276 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 3.49% β-sheet: 36.05% Coil/Unstructured: 60.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01979	Amidohydro_1	6.03
PF07617	DUF1579	5.17
PF03590	AsnA	4.31
PF00202	Aminotran_3	4.31
PF07366	SnoaL	4.31
PF07885	Ion_trans_2	3.45
PF10017	Methyltransf_33	2.59
PF00925	GTP_cyclohydro2	2.59
PF14534	DUF4440	1.72
PF13419	HAD_2	0.86
PF13407	Peripla_BP_4	0.86
PF03009	GDPD	0.86
PF01527	HTH_Tnp_1	0.86
PF09604	Potass_KdpF	0.86
PF12836	HHH_3	0.86
PF07676	PD40	0.86
PF07589	PEP-CTERM	0.86
PF00296	Bac_luciferase	0.86
PF09261	Alpha-mann_mid	0.86
PF13714	PEP_mutase	0.86
PF06628	Catalase-rel	0.86
PF00155	Aminotran_1_2	0.86
PF13474	SnoaL_3	0.86
PF00398	RrnaAD	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2502	Asparagine synthetase A	Amino acid transport and metabolism [E]	4.31
COG0807	GTP cyclohydrolase II	Coenzyme transport and metabolism [H]	2.59
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.86
COG0383	Alpha-mannosidase	Carbohydrate transport and metabolism [G]	0.86
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.86
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.86
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.86

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300017943\|Ga0187819_10063593	Not Available	2192	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.21%
Aquatic	Environmental → Aquatic	38.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.72%
Freshwater	Environmental → Aquatic → Freshwater	33.62%
Peat	Environmental → Terrestrial → Peat	9.48%
Sediment	Environmental → Aquatic → Sediment	5.17%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.66%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	32.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.17%
Ice	Environmental → Aquatic → Freshwater → Ice	0.86%
Loam	Environmental → Terrestrial → Soil → Loam	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.10%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	9.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.17%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.45%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.86%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	26.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	9.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.17%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.45%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.72%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.72%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.86%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011058	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 22 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011076	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011079	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 54 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011305	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1000532171	3300004092	Bog Forest Soil	FNVTMDNGDKVYYTYETTAPTDITKPASNKWTIHSGTGKHKGSKGSGTCSGKNSADGSSDWACTGTYSMGK*
Ga0062389_1014692683	3300004092	Bog Forest Soil	TYEGTASTDMMKPAANKWKIVSGTGKYKGAKGTGSCSGKGAADGSFDWECKGTYSMAK*
Ga0062386_1008593251	3300004152	Bog Forest Soil	NGDKVYYTYETSAPTDITKPASNKWTIHSGTGKDKGIKGSGTCSGKNSADGSSDWACTGNYSMGK*
Ga0068966_13461152	3300004476	Peatlands Soil	MDNGDKVHYTYEGSSSTDMTKPVSNKWKIVGGTGKYKGIKGSGTCSGKVNADESNDLRCTGTYSMGK*
Ga0070713_1010462441	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KVYYTYQGSAPMDTSKPAANTWKIVSGEGKHKGIKGSGGCKGTRNKDGSSDWACTGTYSMGQ*
Ga0070731_101842431	3300005538	Surface Soil	MAFHGHFNVTMDNGDKVFYTYEGTAPADMAKPVSNRWKIVNGTGKYKGIKGSGSCSGMRQKDMTVDYTCAGTYSIGK*
Ga0075029_1012249291	3300006052	Watersheds	HGYFNATTDDGDKVHYTYEGSSSTDITKPAANKWKIVSGTGKHKGIKGSGGCAGKVNADGSADWECTGTYSMAK*
Ga0075017_1007010702	3300006059	Watersheds	DDGDKVHYTYEGSSSTDITKPAANKWKIVSGTGKHKGIKGSGGCAGKVNADGSADWECTGTYSMAK*
Ga0075017_1014224621	3300006059	Watersheds	DNGDKVNYTYEGSASTDTKKPASNKWKIVGGTGKHKGIKGSGTCSGKVSADGSYDWECTGTYSMGMGK*
Ga0075030_1011545762	3300006162	Watersheds	SSTDITKPAANKWKIVSGSGRHKGIKGSGGCAGKVNADGSADWECTGTYSMAK*
Ga0075014_1005747221	3300006174	Watersheds	TMDNGDKVYYTYETSAPTDITKPASNKWNIHSGTGKHKGIKGSGTCSGKNSADGSSDWECTGTYSMSK*
Ga0066793_108452421	3300009029	Prmafrost Soil	VYYKYEGSAPTDIAKPASNKWTILSGTGKSKGIKGSGTCSGKNYADGSSDAECIGTYSMGK*
Ga0116214_12892271	3300009520	Peatlands Soil	ATTDDGDKVNYTYEGSGSPDVTKPVANKWKIVGGTGKHKGIKGSGTCSGKSNADGSADLECTGTYSMGMAKTDKMDKMSK*
Ga0116222_10992712	3300009521	Peatlands Soil	YHGYFIATTESGDKVNYTYEGSTPTDTTKPMSNKWKIVGGTGKHKGIKGSGTCSGKASADGSSYDWECTGTYSIAMGKMDKTTK*
Ga0116222_13284863	3300009521	Peatlands Soil	ASTDMTKPFSNKWKILGGTGKYKGIKGSGTCSGKFNADGSIDLDCIGTYSLGK*
Ga0116218_14085931	3300009522	Peatlands Soil	YEGSTPTDTTKPMSNKWKIVGGTGKHKGIKGSGTCSGKASGDGSSFDWECTGTYSMGMAKMDKTTK*
Ga0116221_13809371	3300009523	Peatlands Soil	DKVHYTYEGSASTEATKPPSNKWKIVGGTGKNKGIKGSGTCAGKGNADGSYDWECTGTYSVGMAKMDKMEKMDKMK*
Ga0116225_11574161	3300009524	Peatlands Soil	YTYEGSTPTDTTKPMSNKWKIVGGTGKNKGIKGSGTCSGKASADGSSFDWECTGTYSMGMAKMDKTTK*
Ga0116225_14461502	3300009524	Peatlands Soil	STDITKPVSLKIKILSGTGKYKGIKGSGTCSGKFNADGSFDETCTGTYSLGK*
Ga0116111_10939773	3300009616	Peatland	EGSASTDITKPAPIKWKILSGTGKYKGIKGSGTCSGKFNIDGSFDNACIGTYSMGK*
Ga0116116_11388882	3300009621	Peatland	DNGDKVYYTYEGSASTDVTKPASNKWKILSGTGKYKGIKGSGTCSGKRSADGNSDWACTGTYSTGK*
Ga0116120_10450552	3300009641	Peatland	YYTYEGSASTDVTKPASNKWKILSGTGKYKGIKGSGTCSGKRSADGNSDWACTGTYSNGK
Ga0116132_11629562	3300009646	Peatland	YGDKVYYTYEGSGPTDITKPVSNKWKILSGTGKYKGIKGSGACSGNRTAEGNSDWMCTGTYSIGK*
Ga0116219_107091791	3300009824	Peatlands Soil	MENGDKVYYKYEGSAPTDIAKPASNKWTILSGTGKSKGIKGSGTCSGTRTADGDSDWACTGTVSMDK*
Ga0116219_107172722	3300009824	Peatlands Soil	YEGSATTDATKPLANKWKIVSGTGKHKGIKGSGTCAGKAVADGYDWECTGTYSMSMAKGK
Ga0116219_107575722	3300009824	Peatlands Soil	ETTAPTDITKPASNKWTIHSGTGKHKGSKGSGTCSGKNNADGSSDWACTGTYSMGK*
Ga0116219_107825101	3300009824	Peatlands Soil	ETTAPTDITKPASNKWTIHSGTEKHKGIKGSGTCSGKNNADGSSDWACTGTYSMGK*
Ga0116223_104308012	3300009839	Peatlands Soil	TYEGSASTDITKPVSLKWKILSGTGKYKGIKGSGTCSGKFNADGSADWECTGTYSTGK*
Ga0074046_101719772	3300010339	Bog Forest Soil	ITKPFSEKYKILSGTGKYKGIKGSGTCSVKLNADGSGDTECTGTYSMGK*
Ga0074046_108283231	3300010339	Bog Forest Soil	TMDNGDKVYYTYGVSMPIDITKPISQKWKILSGTGKYKSIKGSGICSGKVNADGSADWECTGTFSMGK*
Ga0126372_113197281	3300010360	Tropical Forest Soil	MTGHGRYNVTMENGDKIFYTYETSGPTDPGKPLSNKWKIHSGTGKYKEVKGSGSCSGKRSTDGSSDWQCTGTYS
Ga0136449_1022410481	3300010379	Peatlands Soil	TMDNGDKVYYTYETSAPTDITKPASNKWTIHSGTGKHKGSKGSGTCSGKNSADGSSDWACTGTYSMGK*
Ga0136449_1027456191	3300010379	Peatlands Soil	SGDKVNYTYEGSTPTDTTKPMSNKWKIVGGTGKNKGIKGSGTCSGKASADGSSFDWECTGTYSMGMAKMDKTTK*
Ga0138541_10050061	3300011058	Peatlands Soil	MDNGDKVYGTWEGSASTDITKPVSLKIKILSGTGKYKGIKGSGTCSGKFNADGSFDETCTGTYSLGK*
Ga0138574_11566491	3300011076	Peatlands Soil	TDMTKPVSNKWKIVGGTGKYKGIKGSGTCSGKVNADESNDLRCTGTYSMGK*
Ga0138569_11142902	3300011079	Peatlands Soil	GDKVSYMYEGSATTDATKPLANKWKIVSGTGKHKGIKGSGTCAGKAVADGYDWECTGTYSMSMAKGK*
Ga0138573_10640283	3300011089	Peatlands Soil	MEGSASTDITKPVSLKIKILSGTGKYKGIKGSGTCSGKFNADGSFDETCTGTYSLGK*
Ga0137391_106840051	3300011270	Vadose Zone Soil	GTAPTDATKPASNKWKIVSGSGKNKGIKGSGTCSGKGSADGSFDWECTGTYSMGMGKK*
Ga0137393_114300741	3300011271	Vadose Zone Soil	RDRSNEGTAPTDATKPASNKWKIVSGSGKNKGIKGSGTCSGKGNADGSFDWECTGTYSMGIAK*
Ga0138532_10805851	3300011305	Peatlands Soil	DAGDKVSYMYEGSATTDATKPLANKWKIVSGTGKHKGIKGSGTCAGKAVADGYDWECTGTYSMSMAKGK*
Ga0137389_109732122	3300012096	Vadose Zone Soil	APTDATKPASNKWKIVSGSGKNKGIKGSGTCSGKGNADGSFDWECTGTYSMGIAK*
Ga0136616_101617331	3300012679	Polar Desert Sand	KWKILSGTGKYKGIKGSGTCSGKLNADAADWECTGTYSMGK*
Ga0120127_101604422	3300013503	Permafrost	IFYTYEGSYDQKKPLANKWKIVKGTGKHKGEKGSGSCSGKANQDGSFDWECTWPTGMAAKAKG*
Ga0181527_10118936	3300014153	Bog	TKPLSWKWKILSGTGKYKGIKGSGTISGKYNADGSFDAECTGTYSMGK*
Ga0181527_10122759	3300014153	Bog	TKPLSWKWKILSGTGKYKGIKGSGTISGKYNADGSFDAECTGTYSIGK*
Ga0181527_10966311	3300014153	Bog	TKPLSWKWKILSGTGKYKGIKGSGTISGKYNADGSFDAECIGTYSISK*
Ga0181530_106389811	3300014159	Bog	TTDSGDKVNYTYEGTGSADIAKPVANKWKIVSGTGKNKGIKGSGSCAGKVNADGSLDLECTGTYSMGMGKMDKMTK*
Ga0181538_105376641	3300014162	Bog	VTTDSGDKVYYTYEGSAPTDIAKPASNKWKIVSGTGKYKGIKGSGTCSGNRGADASDWACTGTYAIK*
Ga0181538_107446172	3300014162	Bog	YFIATTDSGDKVNYTYEGTGSADIAKPVANKWKIVSGTGKSKGIKGSGSCAGKVNADGSSDLECTGTYSMGMGKMDKMTK*
Ga0181523_106843882	3300014165	Bog	MENGDKIYYTYEGSNSTDTTKPISNKWKVVSGTGKYKGIKGSGSCSGKMNADGSDDITCTGTYSMGMAKMDKMSK*
Ga0182015_100987841	3300014495	Palsa	SASTDIAKPAANKWRIVSGTGKHKGIKGSGSCAGKVNADGSADWKCTGTYSMGMAKTEKMSK*
Ga0182012_101049623	3300014499	Bog	MDNGDKVHYTYEGSASTDMAKPVSNKWKIVGGTGKYKGIKGSGTCSGKVTADESNDLRCTGTYSM
Ga0187818_104999752	3300017823	Freshwater Sediment	STDITKPVSEKWKVLSGTGKYKGIKASGTCSAMLNTDGSFEDTCTGTYSLGK
Ga0187801_103513572	3300017933	Freshwater Sediment	ETSGPTEIGKPLSNKWKINSGTGKYKGIKGSGACSGKRSADGSSTWECSGTYSMGK
Ga0187808_103265802	3300017942	Freshwater Sediment	GNGDKLYETYEGSASTDITKPFSNKWKILTGTGKYKGIKGSGTCSGKFNADGSIDLECTGTYSLGK
Ga0187819_100635931	3300017943	Freshwater Sediment	ANMTMDNGDKVYGTWEGSASTDITKPVSLKIKILRGTGKYKGIKGSGTCSGKFNADGSFDETCTGTYSLGK
Ga0187819_102163011	3300017943	Freshwater Sediment	AKPASNKWKILSGTGQSKGIKGSGTCSGTRTADGDSDWACTGTVSMGK
Ga0187819_106001372	3300017943	Freshwater Sediment	VTMDNGDKVYYTYETSAPTDITKPASNKWTIHSGTGKHKGIKGSGTCSGKNSADGSSDWVCTGTYSMGK
Ga0187819_107247221	3300017943	Freshwater Sediment	VYYTYETSAPTDIAKPASNKWTIHSGTGKHKGIKGSGTCSGKNNADGSSDWVCTGTYSTS
Ga0187817_101777491	3300017955	Freshwater Sediment	KPVSLKIKILRGTGKYKGIKGSGTCSGKFNADGSFDETCTGTYSLGK
Ga0187816_101907921	3300017995	Freshwater Sediment	MDNGDKVYGTWEGSASTDITKPVSLKIKILRGTGKYKGIKGSGTCSGKFNADGSFDETCTGTYSLGK
Ga0187804_101794162	3300018006	Freshwater Sediment	ETGADGDKVNYMYEGSAPTDTTKPLSNKWKIVGGTGKNKGIKGSGTCSGKASADGSSFDWECTGTYSMGMAKTEKMSK
Ga0187805_103426881	3300018007	Freshwater Sediment	TMDSGDKVYYTYETSGPTEIGKPVSNKWKISDGTGKYKAVKGSGSCSGKRAADGSSTWQCSGTYSWMYSGG
Ga0187884_100796531	3300018009	Peatland	NGDKIYYTYEGSNSTDTTKPISNKWKVVSGTGKYKGIKGSGSCSGKMNADGSDDITCTGTYSMGMAKMDKMSK
Ga0187874_102164211	3300018019	Peatland	TDITKPVSWKGKILSGTGKYKGIKGSVTCSGKFNADGSLDAECTGTYSIGK
Ga0187874_103386671	3300018019	Peatland	KYKILSGTGKYKGIKGSGTCSVKLNADGSGDTECTGTYSMGK
Ga0187882_13422581	3300018021	Peatland	NGDKVYYTYGVSMPIDITKPISEKWKILSGTGKYKSIKGSGICSGKVNADGSADWECTGTYSMGK
Ga0187889_100931533	3300018023	Peatland	SASTDFTKPVPIKWKILNGTGKYKGIKGSGTCSGKFNADGSFDNACTGTYSLGK
Ga0187889_103341042	3300018023	Peatland	HGYFIATTDSGDKVNYMYEGSTPTDTTKPLSNKWKIVGGTGKNKGIKGSGTCSGKASGDGSSFDWDCTGTYSMGMAKMDKMK
Ga0187881_103118082	3300018024	Peatland	YYTYEGSASTDVTKPASNKWKILSGTGKYKGIKGSGTCSGKRSADGNSDWACTGTYSTGK
Ga0187869_101216172	3300018030	Peatland	MDNGDKVHYTYEGSASTDMAKPVSNKWKIVGGTGKYKGIKGSGTCSGKVTADESNDLRCTGTYSMGMETMDKMSK
Ga0187862_101649802	3300018040	Peatland	MDNADKVYYTYEGSASTDLTKPFSIKWKILSGTGKYKGIKGSGTCSAKPNADGSVDDTCTGTYSLGK
Ga0187858_104780803	3300018057	Peatland	MDNGDKVYWTYEGSASTDITKPFSEKYKILSGTGKYKGIKGSGTCSVKLNADGSGD
Ga0187858_107127021	3300018057	Peatland	VYWTYEGSASTDITKPFSEKWKILSGTGKYKRIKGSGTCSVKLNADGSGDMECTGTYSLG
Ga0187772_111215871	3300018085	Tropical Peatland	ETKGSSDIKKHASNTWKIVSGTGKYKGIKGSGTCSGTRNEDGSSDWECSGTTAIGK
Ga0187769_104861771	3300018086	Tropical Peatland	GDKVYYTYEGSGPTEIGKPTSNKWKIVSGTGKNKGIKGSGTCSGKRNADGSSDWDCTGTYSMGK
Ga0187771_102784612	3300018088	Tropical Peatland	GSGPTEIGKPTSNKWKIVGGTGKDKGIKGSGTCSGKRNADGSSDWDCTGTYSMGK
Ga0187774_112217071	3300018089	Tropical Peatland	KVYYTYETTAPTDITKPASNKWKIVSGTGKQNGVKGSGTCSGKNNADGSSDWQCTGTYSAGK
Ga0182031_14124293	3300019787	Bog	MDNGDKVHYTYEGSASTDMAKPVSNKWKIVGGTGKYKGIKGSGTCSGKVTADESNDLRCTGTYSMGTETMDKMSKKFESGSSKQEISKGVVV
Ga0210384_103042883	3300021432	Soil	GYYIANTVDGDKVNYKYEGSASTDITKPVANKWKIAGGTGKNKGIKGSGTCSGKANSDGSFDYECTGTYSMGMAKMDKMGN
Ga0209002_101256801	3300025289	Soil	GRFNVTLDNGDTVYYTYEGSGSTDNSKPLSNKWKIKSGTGKHKGVKGSGTCSGKMNADGSTDWECTGTYSMGM
Ga0209002_107484021	3300025289	Soil	EGSGSTDITKPASNKWKIQSGTGKYKGIKGSGTCSGTLHEDGSSDWECTGTYSIGK
Ga0208036_10553652	3300025419	Peatland	VPIKWKILNGTGKYKGIKGSGTCSGKFNADGSFDNACTGTYSLGK
Ga0208479_10718981	3300025474	Arctic Peat Soil	YGGSASTDITTPFSNKWKILSGTGKYKGIKGSGTCSGKNYADGSSDAECIGTYSMGK
Ga0208563_10749251	3300025501	Peatland	YGDKVYYTYEGSGPTDITKPVSNKWKILSGTGKYKGIKGSGACSGNRTAEGNSDWMCTGTYSIGK
Ga0208714_10280722	3300025527	Arctic Peat Soil	MNVTIDNGDKVYYTYGVSMPIDIRKPVSQKWKILSGTGKYKGIKGFGACSGKVNADGSADWE
Ga0208324_11925161	3300027604	Peatlands Soil	KIKILSGTGKYKGIKGSGTCSGKFNADGSFDETCTGTYSLGK
Ga0208044_10921551	3300027625	Peatlands Soil	FTFKWKILSGTGKYTGIKGSGTTSMKFNADGSADDTCTGTYSLGK
Ga0209517_107246652	3300027854	Peatlands Soil	NGDKVYYTYETTAPTDITKPASNKWTIHSGTGKHKGSKGSGTCSGKNNADGSSDWACTGTYSMGK
Ga0209283_105627372	3300027875	Vadose Zone Soil	DDGDKVYYTYEGSASTDIAKPAANKWKIVSGTGKHEGIKGSGGCSGKVNADGSADWECTGTYSMGMAK
Ga0209415_103582662	3300027905	Peatlands Soil	YEGSTPTDTTKPMSNKWKIVGGTGKNKGIKGSGTCSGKASADGSSFDWECTGTYSMGMAKMDKTTK
Ga0209415_107772152	3300027905	Peatlands Soil	DGDKVHYTYEGSASTEATKPPSNKWKIVGGTGKNKGIKGSGTCAGKGNADGSYDWECTGTYSVGMAKMDKMEKMDKMK
Ga0209415_108421682	3300027905	Peatlands Soil	DKVYYTYETTAPTDITKPASNKWTIHSGTGKDKGIKGSGTCSGKRNADESSDWACTGTHSMGK
Ga0209415_109570982	3300027905	Peatlands Soil	PASNKWTIHSGTGKHKGSKGSGTCSGKNSADGSSDWACTGTYSMGK
Ga0209698_104114182	3300027911	Watersheds	DKVHYTYEGSTSTDTTKPAANKWKIVSGTGKNKGIKGSGTCSGKANADGSYDWECTGTYSMGMGKMDKMDKMK
Ga0255358_10160631	3300028069	Soil	STDITKPFSEKWKILSGTGKYKGIKGSETCSGKYNADGSFEDECTGTYSMGK
Ga0302222_103623202	3300028798	Palsa	EGTASTDPAKPAANKWKVVGGTGKLKSAKGSGSCSGKGNADGSFDWQCTGTYSAGMAK
Ga0302177_106525602	3300030053	Palsa	TFHGRYNATTDNGDKVFYTYEGTASTDPAKPAANKWKVVGGTGKLKSAKGSGSCSGKGNADGSFDWQCTGTYSAGMAK
Ga0311353_113209372	3300030399	Palsa	GDKVFYTYEGTASTDPAKPAANKWKVVGGTGKLKSAKGSGSCSGKGNADGSFDWQCTGTYSAGMAK
Ga0311354_116558611	3300030618	Palsa	TNHGHFNVTMGNGDKVYYTYVGSASTDLTKPASNKWKIVSGTGSYKGIKGSGSCSGKLSADGTGEWDCTGTYTMGK
Ga0316363_101226043	3300030659	Peatlands Soil	EGSASTDITKPVSLKIKILSGTGKYKGIKGSGTCSGKFNADGSFDETCTGTYSLGK
Ga0316363_102190242	3300030659	Peatlands Soil	YHARLNVTMDNGDKVYWTYEGSASTDITKPVSLKWKILSGTGKYKGIKGSGTCSGKFNADGSADWECTGTYSTGK
Ga0310039_103429291	3300030706	Peatlands Soil	ENGDKVYYKYEGSAPTDIAKPASNKWTILSGTGKSKGIKGSGTCSGTRTADGDSDWACTGTVSMDK
Ga0310686_1065061522	3300031708	Soil	MYEGSATTDATKPIANKWKIVGGSGKHKGMKGSGTCSGKAVEGAFDYECTGTYSMGTGK
Ga0307475_114090051	3300031754	Hardwood Forest Soil	TTDNGDKAFYTYEGTASTDPAKPAANKWKIASGTGKLKGAKGSGSCSGKGNADGSFDWECTGTYSMGMAKAK
Ga0311301_125694881	3300032160	Peatlands Soil	ENGDKVYYTYEGSSSTDTTKPISNKWKVVNGTGKYKGIKGSGSCSGKVNADGSDDLECTGTYSMGMGKMDKMSK
Ga0307471_1011291552	3300032180	Hardwood Forest Soil	GDMVYYTYEGSGPTDITKPASNKWKIMNGTGKHKGMKGSGSCSGTRHEDGSSDWACTGTYSM
Ga0335079_114591711	3300032783	Soil	ANNNLPPNKWKIASGTGKYKGIKGMGNCSGKQNTDQSSDWTCTGTYSMGK
Ga0335080_123422231	3300032828	Soil	GDMEYYTYETSGPTDTKKPAANKWKIVGGTGKEKGVKASGSCSGTRSDDGSSDWTCSGTKAKAM
Ga0335081_102279881	3300032892	Soil	EGSGPTDITKPAMNKWKGHNGTGKLKGVDASGGCTGARHDDGTSDWTCSGTYSMGKESMGKEEMKK
Ga0326728_100127861	3300033402	Peat Soil	DMTKPLSWKWKILSGTGKYKGIKGSGTISGKYNADGSFDAECTGTYSMGK
Ga0326728_100220161	3300033402	Peat Soil	DMTKPLSWKWKILSGTGKYKGIKGSGTISGKYNADGSFDAECIGTYSISK
Ga0326728_106504151	3300033402	Peat Soil	GDKVYYTFEGSASTDITKPVLFKWKILSGTGKYKGIKGSGTCSGKYNADGSLDHACTGTYSLGK
Ga0371490_10241574	3300033561	Peat Soil	ENGDKVYYTFEGSGSADSTKPASSKSKILSGTGKYKGIKGSGTCSIKSNPDGSFDMECTGTYSIGK
Ga0371488_0010286_7653_7802	3300033983	Peat Soil	MTKPLSWKWKILSGTGKYKGIKGSGTISGKYNADGSFDAECTGTYSMGK
Ga0371488_0129817_1196_1345	3300033983	Peat Soil	MTKPLSWKWKILSGTGKYKGIKGSGTISGKYNADGSFDAECIGTYSISK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079057

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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