Metagenome / Metatranscriptome Family F079038

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079038
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	69 residues
Representative Sequence	AGLVDGVAAALPGRGAVIRASAAAPLVLRRAFDRGFRVDHLGNLMVRGPYTPPPAQLYALFPESL
Number of Associated Samples	108
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.70 %
% of genes near scaffold ends (potentially truncated)	93.97 %
% of genes from short scaffolds (< 2000 bps)	91.38 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.793 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (28.448 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.966 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.58% β-sheet: 8.60% Coil/Unstructured: 68.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13717	zinc_ribbon_4	61.21
PF13719	zinc_ribbon_5	18.97
PF05721	PhyH	3.45
PF07995	GSDH	0.86
PF09537	DUF2383	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.45
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.62 %
Unclassified	root	N/A	11.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	71.55 %
Unclassified	root	N/A	11.21 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.86 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	71.55 %
Unclassified	root	N/A	11.21 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5.17 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.86 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.86 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.86 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.86 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.86 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	0.86 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	0.86 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.86 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_105058812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1097	Open in IMG/M
3300002128\|JGI24036J26619_10043498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	869	Open in IMG/M
3300005329\|Ga0070683_100172964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2050	Open in IMG/M
3300005329\|Ga0070683_100639277	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1019	Open in IMG/M
3300005340\|Ga0070689_101179311	Not Available	687	Open in IMG/M
3300005355\|Ga0070671_101214308	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	664	Open in IMG/M
3300005434\|Ga0070709_10855156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	717	Open in IMG/M
3300005438\|Ga0070701_10414247	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	857	Open in IMG/M
3300005441\|Ga0070700_100884962	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	726	Open in IMG/M
3300005444\|Ga0070694_101817639	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	519	Open in IMG/M
3300005458\|Ga0070681_10917172	Not Available	795	Open in IMG/M
3300005544\|Ga0070686_101714378	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	533	Open in IMG/M
3300005563\|Ga0068855_100350306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1627	Open in IMG/M
3300005564\|Ga0070664_100788374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	888	Open in IMG/M
3300005602\|Ga0070762_10626297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	716	Open in IMG/M
3300005618\|Ga0068864_102133291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	567	Open in IMG/M
3300005712\|Ga0070764_10339329	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	876	Open in IMG/M
3300005719\|Ga0068861_100363320	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1274	Open in IMG/M
3300005844\|Ga0068862_100566725	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1086	Open in IMG/M
3300005950\|Ga0066787_10068193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	712	Open in IMG/M
3300005993\|Ga0080027_10026821	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300005995\|Ga0066790_10367847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	614	Open in IMG/M
3300006028\|Ga0070717_11763890	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	560	Open in IMG/M
3300006046\|Ga0066652_100828766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	884	Open in IMG/M
3300006175\|Ga0070712_100167234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1703	Open in IMG/M
3300009098\|Ga0105245_11651633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	693	Open in IMG/M
3300009156\|Ga0111538_10878827	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1135	Open in IMG/M
3300009156\|Ga0111538_12780962	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	613	Open in IMG/M
3300009174\|Ga0105241_10384248	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300010147\|Ga0126319_1307928	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300010366\|Ga0126379_11715350	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	733	Open in IMG/M
3300010397\|Ga0134124_12749282	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	536	Open in IMG/M
3300010398\|Ga0126383_13452991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	516	Open in IMG/M
3300010399\|Ga0134127_12097991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	644	Open in IMG/M
3300010400\|Ga0134122_12767491	Not Available	543	Open in IMG/M
3300010401\|Ga0134121_11911608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	623	Open in IMG/M
3300010869\|Ga0126359_1352699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	704	Open in IMG/M
3300011417\|Ga0137326_1035973	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1063	Open in IMG/M
3300011434\|Ga0137464_1193683	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	619	Open in IMG/M
3300011445\|Ga0137427_10176064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	885	Open in IMG/M
3300012358\|Ga0137368_10924984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	529	Open in IMG/M
3300012910\|Ga0157308_10088816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	889	Open in IMG/M
3300012929\|Ga0137404_10135151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2034	Open in IMG/M
3300012929\|Ga0137404_11036426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	751	Open in IMG/M
3300012930\|Ga0137407_10618324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1017	Open in IMG/M
3300012930\|Ga0137407_11598602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	621	Open in IMG/M
3300013306\|Ga0163162_12963937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	546	Open in IMG/M
3300013308\|Ga0157375_11542914	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	784	Open in IMG/M
3300014157\|Ga0134078_10584681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300014969\|Ga0157376_13129504	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300015374\|Ga0132255_102077865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	865	Open in IMG/M
3300015374\|Ga0132255_103931856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	631	Open in IMG/M
3300018072\|Ga0184635_10371696	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	545	Open in IMG/M
3300018433\|Ga0066667_11923402	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300018469\|Ga0190270_12817206	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	549	Open in IMG/M
3300018476\|Ga0190274_13513143	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300021081\|Ga0210379_10447968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	572	Open in IMG/M
3300021181\|Ga0210388_10266070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1505	Open in IMG/M
3300021401\|Ga0210393_11158438	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300021402\|Ga0210385_11414526	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300021404\|Ga0210389_10233590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1437	Open in IMG/M
3300021405\|Ga0210387_10999566	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	733	Open in IMG/M
3300021406\|Ga0210386_10534859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1013	Open in IMG/M
3300024224\|Ga0247673_1063292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	539	Open in IMG/M
3300025898\|Ga0207692_10235327	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1092	Open in IMG/M
3300025906\|Ga0207699_10225685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1281	Open in IMG/M
3300025912\|Ga0207707_10902883	Not Available	730	Open in IMG/M
3300025915\|Ga0207693_10164716	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1745	Open in IMG/M
3300025924\|Ga0207694_11483112	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300025926\|Ga0207659_10535592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	994	Open in IMG/M
3300025931\|Ga0207644_10861578	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	759	Open in IMG/M
3300025949\|Ga0207667_10125267	All Organisms → cellular organisms → Bacteria → Proteobacteria	2646	Open in IMG/M
3300025986\|Ga0207658_10924590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	795	Open in IMG/M
3300026075\|Ga0207708_11293987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	639	Open in IMG/M
3300026078\|Ga0207702_12011913	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	568	Open in IMG/M
3300026116\|Ga0207674_11588850	Not Available	623	Open in IMG/M
3300026118\|Ga0207675_100221043	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1825	Open in IMG/M
3300026214\|Ga0209838_1061522	Not Available	561	Open in IMG/M
3300026281\|Ga0209863_10078128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	976	Open in IMG/M
3300026557\|Ga0179587_10932997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	572	Open in IMG/M
3300027884\|Ga0209275_10311171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	876	Open in IMG/M
3300027884\|Ga0209275_10578255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	644	Open in IMG/M
3300028381\|Ga0268264_11851119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	613	Open in IMG/M
3300028770\|Ga0302258_1150995	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300028800\|Ga0265338_10882274	Not Available	610	Open in IMG/M
3300029957\|Ga0265324_10326238	Not Available	523	Open in IMG/M
3300030010\|Ga0302299_10520879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	597	Open in IMG/M
3300030294\|Ga0311349_10591270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1049	Open in IMG/M
3300030336\|Ga0247826_11678555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	518	Open in IMG/M
3300031170\|Ga0307498_10302015	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300031239\|Ga0265328_10075111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1244	Open in IMG/M
3300031538\|Ga0310888_11082820	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300031543\|Ga0318516_10554600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	658	Open in IMG/M
3300031543\|Ga0318516_10787708	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300031711\|Ga0265314_10035637	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3625	Open in IMG/M
3300031723\|Ga0318493_10533245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	651	Open in IMG/M
3300031744\|Ga0306918_11249757	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300031747\|Ga0318502_10541082	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	699	Open in IMG/M
3300031751\|Ga0318494_10648772	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300031779\|Ga0318566_10423956	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	654	Open in IMG/M
3300031938\|Ga0308175_101061805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	897	Open in IMG/M
3300031938\|Ga0308175_101687187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	709	Open in IMG/M
3300031954\|Ga0306926_12414828	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300032001\|Ga0306922_11980752	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	568	Open in IMG/M
3300032009\|Ga0318563_10289897	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	885	Open in IMG/M
3300032066\|Ga0318514_10448395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	686	Open in IMG/M
3300032068\|Ga0318553_10427844	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	693	Open in IMG/M
3300032174\|Ga0307470_11674803	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	535	Open in IMG/M
3300033158\|Ga0335077_12045092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	531	Open in IMG/M
3300033550\|Ga0247829_11086210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	664	Open in IMG/M
3300034130\|Ga0370494_128988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	644	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.86%
Host-Associated	Host-Associated	24.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.83%
Plants	Host-Associated → Plants	24.14%
Aquatic	Environmental → Aquatic	6.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.34%
Sediment	Environmental → Aquatic → Sediment	3.45%
Peat	Environmental → Terrestrial → Peat	2.59%
Freshwater	Environmental → Aquatic → Freshwater	1.72%
Marine	Environmental → Aquatic → Marine	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.10%
Loam	Environmental → Terrestrial → Soil → Loam	18.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.86%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.45%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.45%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.59%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.86%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.86%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_112879642	3300000891	Soil	AVIRASAAAPALLRRAFERGFLVDHLGNLMVRGTYVPPPAQLYALFPESL*
JGI10216J12902_1050588121	3300000956	Soil	AVIRASAASPRALQRAFARGFKIDHLGNLMVSGPFQPPPAQLYALFPESL*
JGI24036J26619_100434981	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	ASLPGRAAVIRASAAAPALLRRAFERGFLVDHLGNLMVRGPYVPPPAQLYALFPESL*
Ga0068995_100784982	3300005206	Natural And Restored Wetlands	IRASAAAPALLRRAFDRGFLVDHLGNLMVRGSYAPPPAQLYALFPESL*
Ga0070683_1001729643	3300005329	Corn Rhizosphere	VALPGRAAVIRASAAAPSVLLRAFARGFRVDHLGNLMVAGPYVPPPAQLYALFPESL*
Ga0070683_1006392771	3300005329	Corn Rhizosphere	ESADILATLVDAVAAALPGRPAVIRGSASAPAVLHRAFERGFRVDHLGNLMVSGAYRPPPAQLYALFPESL*
Ga0070689_1011793112	3300005340	Switchgrass Rhizosphere	ASVALPGRSAVMRASASCPAVLRRAFDRGFRVDHLGNLMVVGKIELPPAQLYALFPESL*
Ga0070671_1012143082	3300005355	Switchgrass Rhizosphere	LAALVDGVAASLPGRAAVIRASAAAPAMLRRAFERGFLVDHLGNLMVRGAYTPPPAQLYALFPESL*
Ga0070709_108551561	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VAAALPGRPAVIRGSAAAPAVLHRAFERGFRVDHLGNLMVSGAYRPPPAQLYALFPESL*
Ga0070701_104142472	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	AESPELLATLIDAVAAALPGRPAVIRGSAATPPVLHRAFDRGFRVDHLGNLMVAGSYRFPPAQLYALFPESL*
Ga0070700_1008849622	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	DGVAASLPGRAAVIRASAAAPAMLRRAFDRGFLVDHLGNLMVRGPYVPPPAQLYALFPESL*
Ga0070694_1018176392	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ESEDALAALVDAVAATLPGHPAVIRASASSPQVLQRAFARGFRIDHLGNLMVSGPFQRPAAQLYALFPESL*
Ga0070681_109171721	3300005458	Corn Rhizosphere	SLSLPGRSAVMRASAASTLVLQRAFARGFRVDHLGNLMVVGTRPVPPAQLYALFPESL*
Ga0070686_1017143781	3300005544	Switchgrass Rhizosphere	LALPGRSAVMRASAASPTVLRRAFDCGFRVDHLGNLMVAGPIRLPPSQLYALFPESL*
Ga0068855_1003503063	3300005563	Corn Rhizosphere	ATSEEVMCALVDAASVALPGRSAVMRASASCPAVLRRAFDRGFRVDHLGNLMVVGKIELPPAQLYALFPESL*
Ga0070664_1007883742	3300005564	Corn Rhizosphere	IVGPALAEGDEPLADLLDAVADALPDRPAVIRGSVAAPRALARAFDRGFRVDHLGNLMVTGPYTPPPAQLYALFPESL*
Ga0070762_106262972	3300005602	Soil	AESPEMLADLVDTVADALPDRPAVIRGSAAAPLVLARAFERGFRVDHLGNLMATGPYASPPAQLYALFPESL*
Ga0068864_1021332912	3300005618	Switchgrass Rhizosphere	ASLPGRAAVIRASAAAPLMLRRAFDRGFLVDHLGNLMVRGAYTPPPAQLYALFPESL*
Ga0070764_103393292	3300005712	Soil	SAEGMAALVDGVAFELPGRGAVIRGSAATPSVLLRAFERGFRVDHLGNLMVAGTYAPPPAQLYALFPESL*
Ga0068861_1003633202	3300005719	Switchgrass Rhizosphere	PGRPAVMRASGASLAVLRRAFARGFRVDHLGNLMVAGEIQLPPAQLYALFPESL*
Ga0068862_1005667252	3300005844	Switchgrass Rhizosphere	DEALSSLIDAATLALPGRPAVMRASGASLAVLRRAFARGFRVDHLGNLMVAGEIQLPPAQLYALFPESL*
Ga0066787_100681932	3300005950	Soil	PARVVIGPGVAESAEEMAALVDGVAFELPGRGAVIRGSAATPAVLLRAFERGFRVDHLGNLMVAGRYAPPPAQLYALFPESL*
Ga0080027_100268213	3300005993	Prmafrost Soil	QLPARIIVGPALAESAELIADMVDAVADALPERPAVIRASGSATPVLERAFARGFRVDHLGNLMALGPYTPPPAQLYALFPESL*
Ga0066790_103678471	3300005995	Soil	RALPARVIVGPALAESGALVADLVDAVADALPERPAVIRASAAAPLVLDRAFERGFRVDHLGNLMAKGPYAPPPAQLYALFPESL*
Ga0070717_117638902	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ATLLDAVAAALPGRPAVIRGSAAAPALLHRAFERGFRIDHLGNLMVTGAYRPPPAQLYALFPESL*
Ga0066652_1008287661	3300006046	Soil	ESDEPLADLVDAVADALPERPAVIRGSVAAPRALARAFDRGFRVDHLGNLMVTGPYEAPPAQLYALFPESL*
Ga0070712_1001672342	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YRSLPARVIIGPAVGESADILATLVDAVAAALPGRPAVIRGSASAPAVLHRAFERGFRVDHLGNLMVSGAYRPPPAQLYALFPESL*
Ga0105245_116516332	3300009098	Miscanthus Rhizosphere	GRAAVIRASAAAPALLRRAFERGFLVDHLGNLMVRGTYVPPPAQLYALFPESL*
Ga0111538_108788272	3300009156	Populus Rhizosphere	EMLAALVDGVAASLPGRAAVIRASAAAPLMLRRAFDRGFLVDHLGNLMVRGAYTPPPAQLYALFPESL*
Ga0111538_127809622	3300009156	Populus Rhizosphere	LAALVDGVAAALPGRGAVIRASAAAPVVLRRAFDRGFRVDHLGNLMVRGAYTPPPAQLYALFPESL*
Ga0105241_103842483	3300009174	Corn Rhizosphere	GFLFLRALPARAVVGPAISTSEEVMCALVDAASVALPGRSAVMRASASCPAVLRRAFDRGFRVDHLGNLMVVGKIELPPAQLYALFPESL*
Ga0126319_13079282	3300010147	Soil	IIGPAVADSPEVLCLLLDAVAAALPGRAAVIRSSAATPVVLRRAFERGFRVDHLGNLMVAGEYALPPAQFYALFPESL*
Ga0126379_117153501	3300010366	Tropical Forest Soil	ATLADLVDAVTDALPGRAAVIRASGAAPLVLERAFERGFRVDHLGNLMVLGSYTAPPAQLYALFPESL*
Ga0134124_127492821	3300010397	Terrestrial Soil	LVDGVAASLPGRAAVIRASAAAPLMLRRAFDRGFLVDHLGNLMVRGAYTPPPAQLYALFPESL*
Ga0126383_134529911	3300010398	Tropical Forest Soil	PGRAAVIRASGAAPLVLERAFERGFRVDHLGNLMVLGSYTAPPAQLYALFPESL*
Ga0134127_120979912	3300010399	Terrestrial Soil	GRAAVIRASAAAPAVLLRAFARGFRVDHLGNLMVAGPYTPPPAQLYALFPESL*
Ga0134122_127674912	3300010400	Terrestrial Soil	VMRASGASVAVLRRAFARGFRVDHLGNLMVAGEIQLPPAQLYALFPESL*
Ga0134121_119116081	3300010401	Terrestrial Soil	DAVAAALPGRPAVIRGSAATPPVLHRAFERGFRVDHLGNLMVAGSYRFPPAQLYALFPESL*
Ga0134123_133452422	3300010403	Terrestrial Soil	IRASAAAPLLLRRAFDRGFLVDHLGNLMVRGAYAPPPAQLYALFPESL*
Ga0126359_13526991	3300010869	Boreal Forest Soil	PDRPAVIRGSSAAPLVLTRAFERGFRVDHLGNLMTTGPYAPPPAQLYALFPESL*
Ga0137326_10359731	3300011417	Soil	RAAVIRASAAAPALLRRAFDRGFLVDHLGNLMVRGAYVPPPAQLYALFPESL*
Ga0137464_11936832	3300011434	Soil	AALGDGVAASLPGRAAVIRASAAAPALLRRAFDRGFLVDHLGNLMVRGPYVPPPAQLYALFPESL*
Ga0137427_101760641	3300011445	Soil	LVDGVAASLPGRAAVIRASAAAPALLRRAFDRGFLVDHLGNLMVRGPYVPLPAQLYVLFPESL*
Ga0137368_109249841	3300012358	Vadose Zone Soil	TLPARVVVGPGVAESAEVMADLVDAIAAALPGHPAVIRASASTPAVLQRAFARGFRIDHLGNLMVSGPYHPPAAQLYALFPESL*
Ga0157308_100888162	3300012910	Soil	ALVDGVAASLPGRAAVIRASAAAPLMLRRAFDRGFLVDHLGNLMVRGSYTPPPAQLYALFPESL*
Ga0137404_101351513	3300012929	Vadose Zone Soil	SIVGYLFYRSLPARVILGPAVGESPDVLAALVDAVAAALPGRPAVIRGSAAAPMVLQRAFERGFRVDHLGNLMVAGTYRFPPAQLYALFPESL*
Ga0137404_110364261	3300012929	Vadose Zone Soil	ARIIVGPALAESGELLAELVDAVADALPDRPAVIRASAGVPLALERAFERGFRVDHLGNLMAKGPYEPPPAQLYALFPESL*
Ga0137407_106183242	3300012930	Vadose Zone Soil	LPARVILGPAVGESPDVLAALVDAVAAALPGRPAVIRGSAAAPMVLQRAFERGFRVDHLGNLMVAGTYRFPPAQLYALFPESL*
Ga0137407_115986022	3300012930	Vadose Zone Soil	ALAESGELLAELVDAVADALPDRPAVIRASAGVPLALERAFERGFRVDHLGNLMAKGPYEPPPAQLYALFPESL*
Ga0163162_129639371	3300013306	Switchgrass Rhizosphere	GVASSLPGRAAVIRASAAAPLLLRRAFVRGFLVDHLGNLMVRGAYAPPPAQLYALFPESL
Ga0157375_115429142	3300013308	Miscanthus Rhizosphere	AESAEILAALVDGVASSLPGRAAVIRASAAAPLLLRRAFDRGFLVDHLGNLMVRGAYAPPPAQLYALFPESL*
Ga0134078_105846812	3300014157	Grasslands Soil	MSLPVADLIDAVADALPDQPAVIRGSGTAPVVLERAFARGFRVDHLGNLMVRGPYTPPP
Ga0157376_131295042	3300014969	Miscanthus Rhizosphere	GPGVAESAEIMADLVDGVAVALPGRAAVIRASAAAPSVLLRSFARGFRVDHLGNLMVAGPYVPPPAQLYALFPESL*
Ga0132255_1020778652	3300015374	Arabidopsis Rhizosphere	LAALVDGVAASLPGRAAVIRASAAAPLMLRRAFDRGFLVDHLGNLMVRGSYTPPPAQLYALFPESL*
Ga0132255_1039318562	3300015374	Arabidopsis Rhizosphere	AGLVDGVAAALPGRGAVIRASAAAPLVLRRAFDRGFRVDHLGNLMVRGPYTPPPAQLYALFPESL*
Ga0184635_103716961	3300018072	Groundwater Sediment	AASLPGRAAVIRASAAAPALLRRAFDRGFLVDHLGNLMVRGPYVPPPAQLYALFPESL
Ga0066667_119234021	3300018433	Grasslands Soil	ADLVDAVAVALPGRAAVIRASAAAPSVLLRSFARGFRVDHLGNLMVAGPYAPPPAQLYALFPESL
Ga0190270_128172062	3300018469	Soil	GRGAVIRASAAAPVVLRRAFDRGFRVDHLGNLMVRGPYTPPPAQLYALFPESL
Ga0190274_135131432	3300018476	Soil	DVLAALVDAVAAALPGRGAVIRASAAAPIVLRRAFDRGFRVDHLGNLMVRGPYTPPPAQLYALFPESL
Ga0210379_104479681	3300021081	Groundwater Sediment	SLPGRAAVIRASAAAPVLLRRAFERGFLVDHLGNLMVRGSYTPPPAQLYALFPESL
Ga0210388_102660702	3300021181	Soil	GKISGYLFYRPLPARVVIGPGVAESAQTMADLVDGVAVTLPGRAAVIRASASAPLVLLRSFARGFRVDHLGNLMVAGPYVPPPAQLYALFPESL
Ga0210393_111584381	3300021401	Soil	QEITGYLFFRSLPARVVIGPGVAESAEGMAALVDGVAFELPGRGAVIRGSAAAPSVLLRAFERGFRVDHLGNLMVAGTYAPPPAQLYALFPESL
Ga0210385_114145261	3300021402	Soil	VGPALAESPELLADLVDAVADALPDRPAVIRGSSAAPLVLARAFDRGFRVDHLGNLMATGSYTPPPAQLYALFPESL
Ga0210389_102335902	3300021404	Soil	GPGVAESAEIMADLVDGVALALPGRAAVIRASAAAPSVLLRSFARGFRVDHLGNLMVAGPYAPPPAQLYALFPESL
Ga0210387_109995662	3300021405	Soil	LFYRVLPARTIVGPALAESPELLADLIDAVADALPDRPAVIRASAASPLVVERAFERGFRVDHLGNLMVTGPYIPPPAQLYALFPESL
Ga0210386_105348591	3300021406	Soil	ADLVDGVALALPGRAAVIRASAAAPSVLLRSFARGFRVDHLGNLMVAGPYAPPPAQLYALFPESL
Ga0247673_10632922	3300024224	Soil	LPGRAAVIRASAAAPVLLRRAFERGFLVDHLGNLMVRGTYVPPPVQLYALFPESL
Ga0207692_102353272	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	PGIAETEETMGDLIDAVAAAVPGRAAVIRASAANPAVVLRAFARGFRVDHLGNLMVKGPYRAPPAQLYALFPESL
Ga0207699_102256851	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RSLPARVIIGPAVGESADILATLVDAVAAALPGRPAVIRGSASAPAVLHRAFERGFRVDHLGNLMVSGAYRPPPAQLYALFPESL
Ga0207684_116960481	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VIRASAANPKLLARAFERGFRVDHLGNLMVIGDFRPPPAQ
Ga0207707_109028832	3300025912	Corn Rhizosphere	ASLSLPGRSAVMRASAASTLVLQRAFARGFRVDHLGNLMVVGTRPVPPAQLYALFPESL
Ga0207693_101647161	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	YRSLPARVIIGPAVGESADILATLVDAVAAALPGRPAVIRGSASAPAVLHRAFERGFRVDHLGNLMVSGAYRPPPAQLYALFPESL
Ga0207694_114831121	3300025924	Corn Rhizosphere	FFRPLPARVVIGPGVAESAEIMADLVDGVAVALPGRAAVIRASAAAPSVLLRAFARGFRVDHLGNLMVAGPYVPPPAQLYALFPESL
Ga0207659_105355922	3300025926	Miscanthus Rhizosphere	DAVAAALPGRGAVIRGSASAPIVLRRAFDRGFRVDHLGNLMVRGPYTPPPAQLYALFPES
Ga0207644_108615783	3300025931	Switchgrass Rhizosphere	ASLPGRAAVIRASAAAPLMLRRAFDRGFLVDHLGNLMVRGAYTPPPAQLYALFPESL
Ga0207667_101252674	3300025949	Corn Rhizosphere	AMATSEEVMCALVDAASVALPGRSAVMRASASCPAVLRRAFDRGFRVDHLGNLMVVGKIELPPAQLYALFPESL
Ga0207658_109245901	3300025986	Switchgrass Rhizosphere	AESQEIMMMLIDAVAAALPGRAAVIRGSAAAPAVLRRAFDRGFRVDHLGNLMVAGTYRTPPAQLYSLFPESL
Ga0207708_112939872	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DGVAASLPGRAAVIRASAAAPAMLRRAFDRGFLVDHLGNLMVRGPYVPPPAQLYALFPES
Ga0207702_120119132	3300026078	Corn Rhizosphere	DLIDAVAAALPGRAAVIRASASTPSVLLRAFARGFRVDHLGNLMVKGPYTAPPAQLYALFPESL
Ga0207674_115888501	3300026116	Corn Rhizosphere	LVDAASQALAGRAAVMRASAASPAVLRRALDRGFRVDHLGNLMVAGPITLPPSQLYALFPESL
Ga0207675_1002210432	3300026118	Switchgrass Rhizosphere	GPAVATSDEALSSLIDAATLALPGRPAVMRASGASLAVLRRAFARGFRVDHLGNLMVAGEIQLPPAQLYALFPESL
Ga0209838_10615221	3300026214	Soil	PARVVIGPGVAESAEEMAALVDGVAFELPGRGAVIRGSAATPAVLLRAFERGFRVDHLGNLMVAGRYAPPPAQLYALFPESL
Ga0209863_100781281	3300026281	Prmafrost Soil	QLPARIIVGPALAESAELIADMVDAVADALPERPAVIRASGSATPVLERAFARGFRVDHLGNLMALGPYTPPPAQLYALFPESL
Ga0179587_109329971	3300026557	Vadose Zone Soil	LAELVDAVGDALPDRPAVIRASAGVPLVLERAFERGFRVDHLGNLMVKGPYAPPPAQLYALFPESL
Ga0209167_107451451	3300027867	Surface Soil	AVIRASASTPVVLLRSFARGFRVDHLGNLMVAGPYVPPPAQLYALFPESL
Ga0209275_103111712	3300027884	Soil	PARVVIGPGVAESPSTLADLVDAVAITLPGRAAVIRASAAAPSVLLRAFARGFRVDHLGNLMVAGPYAPPPAQLYALFPESL
Ga0209275_105782551	3300027884	Soil	GPAVAESPELLADLIDTVADALPDRPAVIRGSAAAPLVLARAFERGFRVDHLGNLMATGPYASPPAQLYALFPESL
Ga0268264_118511191	3300028381	Switchgrass Rhizosphere	IDAVAAALPGRPAVIRGSAATPPVLHRAFDRGFRVDHLGNLMVAGSYRFPPAQLYALFPESL
Ga0302258_11509952	3300028770	Fen	YIFYRPLPARVVIGPGVADSAETMADLVDGVAAALPGRAAVIRASAAAPLVLLRAFARGFRVDHLGNLMVAGPYAPPPAQLYALFPESL
Ga0265338_108822742	3300028800	Rhizosphere	SAVMRASAASTLVLQRTFERGFRVDHLGNLMVAGTRPAPPAQLYALFPESL
Ga0265324_103262381	3300029957	Rhizosphere	EELLAALIDAASLSLPGRSAVMRASAAAPLVLRRAFERGFRVDHLGNLMVVGARPTPPAQLYALFPESL
Ga0302299_105208792	3300030010	Fen	RQLPARVIVGPAVAESADLLADLVDAVADALPDRPAVIRASAAVPLVLERAFERGFRVDHLGNLMVTGPYEPPPAQLYALFPESL
Ga0311349_105912702	3300030294	Fen	YRPLPARVVIGPGVADSAETMADLVDGVAAALPGRAAVIRASAAAPLVLLRAFARGFRVDHLGNLMVAGPYAPPPAQLYALFPESL
Ga0247826_116785552	3300030336	Soil	RGAVIRASASAPIVLRRAFDRGFRVDHLGNLMVRGPYTPPPAQLYALFPESL
Ga0307498_103020152	3300031170	Soil	ESDEPLADLIDAVAEALPDRPAVIRGSVAAPRALARAFDRGFRVDHLGNLMVTGPYEPPPAQLYALFPESL
Ga0265328_100751111	3300031239	Rhizosphere	VLPARIIVGPALAESPELLADLVDAVADALPDRPAVIRASSAAPLVVERAFERGFRVDHLGNLMSRGPYAPPPAQLYALFPESL
Ga0310888_110828201	3300031538	Soil	GVAASLPGRAAVIRASAAAPAMLRRAFDRGFLVDHLGNLMVRGPYVPPPAQLYALFPESL
Ga0318516_105546002	3300031543	Soil	SQEVMADLVDAVAAALPGRAAVIRASAAAPLVLQRSFARGFRVDHLGNLMVLGSYHPPPTQLYALFPESL
Ga0318516_107877081	3300031543	Soil	VVIGPAVAESDHVLAALIDAVASSLPGRAAVIRASAATPLVLRRAFQRGFRVDHLGNLMVVGPYTPPPAQLYALFPESL
Ga0265314_100356373	3300031711	Rhizosphere	VGESPEILATLVDAVAAALPGRPAVIRGSASAPAVLHRAFERGFRVDHLGNLMVSGAYRPPPAQLYALFPESL
Ga0318493_105332452	3300031723	Soil	FYRLLPARIIVGPAVADSAELLADLVDAVADALPDRPAVIRASAAAPLVVERAFERGFRVDHLGNLMVVGPYTPPPAQLYALFPESL
Ga0306918_112497571	3300031744	Soil	GPGVAESQEVMADLVDAVAAALPGRAAVIRASAAAPLVLQRSFARGFRVDHLGNLMVLGSYHPPPTQLYALFPESL
Ga0318502_105410821	3300031747	Soil	VGPALADSAELLADLVDAVADALPDRPAVIRASAAATLVVERAFERGFLVDHLGNLMAVGPYAPPPAQLYALFPESL
Ga0318494_106487722	3300031751	Soil	LFYRPLPARVVIGPGVAESAETMGDLVDGVAAALPGRAAVIRASAAGSSVLLRAFARGFRVDHLGNLMVAGPYTPPPAQLYALFPESL
Ga0318566_104239562	3300031779	Soil	DRPAVIRASAAATLVVERAFERGFLVDHLGNLMAVGPYAPPPAQLYALFPESL
Ga0308175_1010618051	3300031938	Soil	VAASLPGRAAVIRASAAAPALLRRAFDRGFLVDHLGNLMVRGAYVPPPAQLYALFPESL
Ga0308175_1016871872	3300031938	Soil	LPARVIIGPAVGESADILATLLDAVAAALPGRPAVIRGSAAAPALLHRAFERGFRIDHLGNLMVTGAYRPPPAQLYALFPESL
Ga0306926_124148282	3300031954	Soil	LLGDLVDAVADALPDRPAVIRASAAAPLVVERAFARGFRVDHLGNLMATGPYAPPPAQLYALFPESL
Ga0306922_119807522	3300032001	Soil	LFYRLLPARIIVGPALADSAELLADLVDAVADALPDRPAVIRASAAATLVVERAFERGFLVDHLGNLMAVGPYAPPPAQLYALFPESL
Ga0318563_102898972	3300032009	Soil	VIRASAAAPLVVERAFARGFRVDHLGNLMATGPYAPPPAQLYALFPESL
Ga0318514_104483952	3300032066	Soil	LFFRTLPARVVVGPGVAESQDVMADLVDAVAAALPGRAAVIRASAAAPTVLQRSFARGFRVDHLGNLMVRGPYHPPPTQLYALFPESL
Ga0318553_104278441	3300032068	Soil	MADLVDAVAAALPGRAAVIRASAAAPTVLQRSFARGFRVDHLGNLMVRGPYHPPPTQLYALFPESL
Ga0307470_116748031	3300032174	Hardwood Forest Soil	SGYLFYRPLPARVVIGPGVAESPETMGDLVDGVAAALPGRAAVIRASAAAPSVLLRAFARGFRVDHLGNLMVAGPYVPPPAQLYALFPESL
Ga0335077_120450922	3300033158	Soil	TEALPGRAAVIRASGAAPLVLQRAFERGFRVDHLGNLMVSGTYTAPPAQLYALFPESL
Ga0247829_110862102	3300033550	Soil	SLPGRAAVIRASAAAPLMLRRAFDRGFLVDHLGNLMVRGAYTPPPAQLYALFPESL
Ga0370494_128988_359_643	3300034130	Untreated Peat Soil	GKISGYIFYRPLPARVVIGPGVADSAETMADLVDGVAVALPGRAAVIRASAAAPLVLLRAFARGFRVDHLGNLMVAGPYAPPPAQLYALFPESL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079038

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences