Metagenome Family F079004

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079004
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	71 residues
Representative Sequence	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV
Number of Associated Samples	100
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.90 %
% of genes near scaffold ends (potentially truncated)	37.93 %
% of genes from short scaffolds (< 2000 bps)	85.34 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.069 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.655 % of family members)
Environment Ontology (ENVO)	Unclassified (31.034 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.379 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.12% β-sheet: 0.00% Coil/Unstructured: 32.88%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF04828	GFA	9.48
PF13670	PepSY_2	7.76
PF10028	DUF2270	5.17
PF13376	OmdA	4.31
PF12697	Abhydrolase_6	4.31
PF12695	Abhydrolase_5	2.59
PF00072	Response_reg	1.72
PF09992	NAGPA	1.72
PF09209	CecR_C	1.72
PF00248	Aldo_ket_red	1.72
PF00817	IMS	0.86
PF07886	BA14K	0.86
PF12844	HTH_19	0.86
PF01726	LexA_DNA_bind	0.86
PF09723	Zn-ribbon_8	0.86
PF09538	FYDLN_acid	0.86
PF01381	HTH_3	0.86
PF00313	CSD	0.86
PF06041	DUF924	0.86
PF00486	Trans_reg_C	0.86
PF02163	Peptidase_M50	0.86
PF00571	CBS	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	9.48
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.86
COG3803	Uncharacterized conserved protein, DUF924 family	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.93 %
Unclassified	root	N/A	37.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.93 %
Unclassified	root	N/A	37.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.07 %
Unclassified	root	N/A	37.07 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.97 %
Unclassified	root	N/A	37.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.72 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31.03 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.86 %
Ciliophora	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	11.21 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	6.90 %
Thermobaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum	0.86 %
Intramacronucleata	subphylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	0.86 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.21 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	6.90 %
Thermobaculum terrenum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum	0.86 %
Spirotrichea	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	0.86 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.21 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	3.45 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	2.59 %
Thermobaculum terrenum ATCC BAA-798	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum → Thermobaculum terrenum ATCC BAA-798	0.86 %
Choreotrichia	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia	0.86 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.21 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	3.45 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	2.59 %
Amycolatopsis methanolica group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis methanolica group	0.86 %
Choreotrichida	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida	0.86 %
Thermobaculum terrenum ATCC BAA-798	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum → Thermobaculum terrenum ATCC BAA-798	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.21 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	3.45 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	2.59 %
Strombidinopsidae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae	0.86 %
Amycolatopsis thermoflava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis methanolica group → Amycolatopsis thermoflava	0.86 %
Thermobaculum terrenum ATCC BAA-798	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum → Thermobaculum terrenum ATCC BAA-798	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.21 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	3.45 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	2.59 %
Strombidinopsis	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis	0.86 %
Amycolatopsis thermoflava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis methanolica group → Amycolatopsis thermoflava	0.86 %
Thermobaculum terrenum ATCC BAA-798	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum → Thermobaculum terrenum ATCC BAA-798	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.07 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.21 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	3.45 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	2.59 %
Strombidinopsis acuminata	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	0.86 %
Amycolatopsis thermoflava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis methanolica group → Amycolatopsis thermoflava	0.86 %
Thermobaculum terrenum ATCC BAA-798	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum → Thermobaculum terrenum ATCC BAA-798	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02JDMJ9	Not Available	534	Open in IMG/M
2088090014\|GPIPI_16535696	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
2088090014\|GPIPI_16845970	Not Available	1424	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1053380	Not Available	633	Open in IMG/M
3300000955\|JGI1027J12803_103713766	Not Available	500	Open in IMG/M
3300000956\|JGI10216J12902_113637557	All Organisms → cellular organisms → Bacteria → Proteobacteria	774	Open in IMG/M
3300002120\|C687J26616_10009746	All Organisms → cellular organisms → Bacteria	3799	Open in IMG/M
3300003994\|Ga0055435_10008390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1882	Open in IMG/M
3300003994\|Ga0055435_10110721	Not Available	735	Open in IMG/M
3300004020\|Ga0055440_10092151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum → Thermobaculum terrenum ATCC BAA-798	715	Open in IMG/M
3300004145\|Ga0055489_10029102	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300004156\|Ga0062589_100456276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1061	Open in IMG/M
3300004479\|Ga0062595_100012920	All Organisms → cellular organisms → Bacteria	2843	Open in IMG/M
3300004633\|Ga0066395_10288590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis methanolica group → Amycolatopsis thermoflava	893	Open in IMG/M
3300005045\|Ga0071328_148949	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300005045\|Ga0071328_171533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3276	Open in IMG/M
3300005093\|Ga0062594_103269270	Not Available	509	Open in IMG/M
3300005164\|Ga0066815_10077970	Not Available	592	Open in IMG/M
3300005294\|Ga0065705_11192225	Not Available	503	Open in IMG/M
3300005328\|Ga0070676_10005391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6813	Open in IMG/M
3300005329\|Ga0070683_101276677	Not Available	706	Open in IMG/M
3300005330\|Ga0070690_100016451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4431	Open in IMG/M
3300005332\|Ga0066388_104855360	Not Available	684	Open in IMG/M
3300005333\|Ga0070677_10062762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1538	Open in IMG/M
3300005336\|Ga0070680_100196848	All Organisms → cellular organisms → Bacteria → Proteobacteria	1699	Open in IMG/M
3300005364\|Ga0070673_101671806	Not Available	602	Open in IMG/M
3300005406\|Ga0070703_10031126	Not Available	1612	Open in IMG/M
3300005434\|Ga0070709_10072998	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300005439\|Ga0070711_102010040	Not Available	508	Open in IMG/M
3300005441\|Ga0070700_100121253	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300005445\|Ga0070708_101730712	Not Available	581	Open in IMG/M
3300005530\|Ga0070679_100340682	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300005713\|Ga0066905_100942660	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005764\|Ga0066903_102200196	Not Available	1063	Open in IMG/M
3300005834\|Ga0068851_10248299	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300005840\|Ga0068870_10311388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	997	Open in IMG/M
3300006049\|Ga0075417_10194389	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300006175\|Ga0070712_101675566	Not Available	556	Open in IMG/M
3300006755\|Ga0079222_10008766	All Organisms → cellular organisms → Bacteria → Proteobacteria	3568	Open in IMG/M
3300006852\|Ga0075433_10243448	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300006880\|Ga0075429_101641801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	558	Open in IMG/M
3300009036\|Ga0105244_10184130	Not Available	990	Open in IMG/M
3300009092\|Ga0105250_10017287	All Organisms → cellular organisms → Bacteria → Proteobacteria	2933	Open in IMG/M
3300009092\|Ga0105250_10076017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1359	Open in IMG/M
3300009094\|Ga0111539_10283082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1929	Open in IMG/M
3300009094\|Ga0111539_10543432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1353	Open in IMG/M
3300009147\|Ga0114129_10191569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2776	Open in IMG/M
3300009156\|Ga0111538_13139993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	576	Open in IMG/M
3300010046\|Ga0126384_10299321	Not Available	1322	Open in IMG/M
3300010376\|Ga0126381_101083850	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300010397\|Ga0134124_10666474	Not Available	1026	Open in IMG/M
3300010399\|Ga0134127_10082235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	2770	Open in IMG/M
3300010868\|Ga0124844_1073698	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	1262	Open in IMG/M
3300012527\|Ga0136633_1159983	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300012882\|Ga0157304_1021857	Not Available	819	Open in IMG/M
3300012891\|Ga0157305_10090444	Not Available	737	Open in IMG/M
3300012892\|Ga0157294_10024706	All Organisms → cellular organisms → Bacteria → Proteobacteria	1205	Open in IMG/M
3300012893\|Ga0157284_10064970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	872	Open in IMG/M
3300012896\|Ga0157303_10013495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1275	Open in IMG/M
3300012899\|Ga0157299_10068859	Not Available	843	Open in IMG/M
3300012906\|Ga0157295_10128856	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300013296\|Ga0157374_11163498	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300013308\|Ga0157375_12989056	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300015371\|Ga0132258_11728567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	1578	Open in IMG/M
3300015373\|Ga0132257_100387831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1696	Open in IMG/M
3300015374\|Ga0132255_101081950	Not Available	1205	Open in IMG/M
3300015374\|Ga0132255_103580987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300018429\|Ga0190272_12493058	Not Available	563	Open in IMG/M
3300019356\|Ga0173481_10037493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1597	Open in IMG/M
3300019356\|Ga0173481_10101182	Not Available	1108	Open in IMG/M
3300019356\|Ga0173481_10167134	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300019361\|Ga0173482_10028130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1672	Open in IMG/M
3300019361\|Ga0173482_10564319	Not Available	565	Open in IMG/M
3300019362\|Ga0173479_10276574	All Organisms → cellular organisms → Bacteria → Proteobacteria	752	Open in IMG/M
3300023072\|Ga0247799_1013630	Not Available	1199	Open in IMG/M
3300023073\|Ga0247744_1042818	Not Available	722	Open in IMG/M
3300024055\|Ga0247794_10196964	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300025159\|Ga0209619_10144268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1381	Open in IMG/M
3300025165\|Ga0209108_10058311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	2128	Open in IMG/M
3300025313\|Ga0209431_10630077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	801	Open in IMG/M
3300025321\|Ga0207656_10495091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	620	Open in IMG/M
3300025327\|Ga0209751_10989677	Not Available	637	Open in IMG/M
3300025538\|Ga0210132_1016190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1022	Open in IMG/M
3300025903\|Ga0207680_10355041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1030	Open in IMG/M
3300025905\|Ga0207685_10080759	Not Available	1345	Open in IMG/M
3300025911\|Ga0207654_10336461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1036	Open in IMG/M
3300025914\|Ga0207671_10879744	Not Available	709	Open in IMG/M
3300025917\|Ga0207660_10166581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1703	Open in IMG/M
3300025928\|Ga0207700_10573965	Not Available	1003	Open in IMG/M
3300025938\|Ga0207704_11129197	Not Available	667	Open in IMG/M
3300025944\|Ga0207661_10675262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	950	Open in IMG/M
3300025961\|Ga0207712_10051581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	2878	Open in IMG/M
3300026041\|Ga0207639_10215775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1654	Open in IMG/M
3300026041\|Ga0207639_10816512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	869	Open in IMG/M
3300026078\|Ga0207702_10090589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2676	Open in IMG/M
3300027665\|Ga0209983_1162688	Not Available	512	Open in IMG/M
3300027765\|Ga0209073_10097044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1036	Open in IMG/M
3300027775\|Ga0209177_10339186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	585	Open in IMG/M
3300027873\|Ga0209814_10468913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	557	Open in IMG/M
3300031280\|Ga0307428_1188253	Not Available	505	Open in IMG/M
3300031360\|Ga0307444_1016659	All Organisms → cellular organisms → Bacteria	2671	Open in IMG/M
3300031368\|Ga0307429_1029490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1791	Open in IMG/M
3300031368\|Ga0307429_1032776	Not Available	1677	Open in IMG/M
3300031368\|Ga0307429_1103051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	803	Open in IMG/M
3300031563\|Ga0307436_1022933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1946	Open in IMG/M
3300031652\|Ga0315553_10433663	Not Available	514	Open in IMG/M
3300031698\|Ga0315537_1178062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	937	Open in IMG/M
3300031716\|Ga0310813_11790098	Not Available	577	Open in IMG/M
3300031949\|Ga0214473_10238011	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300031949\|Ga0214473_10304839	Not Available	1818	Open in IMG/M
3300031949\|Ga0214473_11144566	Not Available	810	Open in IMG/M
3300031949\|Ga0214473_11363597	Not Available	724	Open in IMG/M
3300031949\|Ga0214473_12040378	Not Available	558	Open in IMG/M
3300031965\|Ga0326597_11327505	Not Available	702	Open in IMG/M
3300032075\|Ga0310890_11463967	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300033475\|Ga0310811_10803717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	877	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.41%
Host-Associated	Host-Associated	27.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.34%
Plants	Host-Associated → Plants	27.59%
Aquatic	Environmental → Aquatic	12.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.24%
Marine	Environmental → Aquatic → Marine	11.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.34%
Freshwater	Environmental → Aquatic → Freshwater	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.38%
Loam	Environmental → Terrestrial → Soil → Loam	18.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.79%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.45%
Ice	Environmental → Aquatic → Freshwater → Ice	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.76%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.31%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.45%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.17%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	4.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.59%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.72%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031280	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-240	Environmental	Open in IMG/M
3300031360	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-40	Environmental	Open in IMG/M
3300031368	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-230	Environmental	Open in IMG/M
3300031563	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-40	Environmental	Open in IMG/M
3300031652	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-40	Environmental	Open in IMG/M
3300031698	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-70	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_02844590	2065487018	Soil	IMFHGRSANELSLANAAVVRSLIQRLERKGTLKREDALALLGDAADRLVATPRPTVSTSGAADFIRKEFLTKV
GPIPI_02774180	2088090014	Soil	MFHGRSANELSLANAAVVRSLIQRLERKGTLKREDALALLGDAADRLVATPRPTVSTSGAADFIRKEFLTKV
GPIPI_02438040	2088090014	Soil	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTKV
AP72_2010_repI_A001DRAFT_10533802	3300000893	Forest Soil	ASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRKEFLTKV*
JGI1027J12803_1037137662	3300000955	Soil	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRNTTVSTSGAADLIRKEFLTKV*
JGI10216J12902_1136375572	3300000956	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTK
C687J26616_100097465	3300002120	Soil	MFHGRSANELGLASAAVTLSLVQRLVKKGTLKREDALALLGDAADRLVATPRDTTVSSTGAADLIRTEFVPKV*
Ga0055435_100083903	3300003994	Natural And Restored Wetlands	MFHGRSANEVALASAAIVLALVQRLEKKGTLKHEDALAILGDAADRLIATPRDTTVSSTGAADLIRKEFLPKV*
Ga0055435_101107212	3300003994	Natural And Restored Wetlands	MFHGRSANEVALASAAVVLTLLQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSSTGAADLIRKEFLPKV*
Ga0055440_100921511	3300004020	Natural And Restored Wetlands	APAREVMVMFHGRSANEVALASAAIVLALVQRLEKKGTLKREDAFALLGDAADRLVADPSQTTISAAGAADLIRKEFVPKV*
Ga0055489_100291021	3300004145	Natural And Restored Wetlands	MFHGRSANEVGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSMQGAADLIRQEFLTKV*
Ga0062589_1004562762	3300004156	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADPLVATPRDTTASTSGAADLIRKEFLTKV*
Ga0062595_1000129202	3300004479	Soil	MFHGRSANELSLANAAVVRSLIQRLERKGTLKREDALALLGDAADRLVATPRPTVSTSGAADFIRKEFLTKV*
Ga0066395_102885901	3300004633	Tropical Forest Soil	MFHGRSADELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRKEFLTKV*
Ga0071328_1489491	3300005045	Permafrost	MFHGRSANEVALASAAIVLALVQRLEKKGTLKREDALALLGDAADRLVADPAQTTIAATGAAELIRKEFVPKV*
Ga0071328_1715334	3300005045	Permafrost	MFHGRSANEVGLASAAVVFALVQRLVKKGTLNREDALALLGDAADRLVATPRDTTISTTGAADLIRKEFVPKV*
Ga0062594_1032692701	3300005093	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALSGDAADRLVATPRDTTVSTQGAADLIRKEFLTKV*
Ga0066815_100779701	3300005164	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTQGAADLIRKEFLTKV*
Ga0065705_111922251	3300005294	Switchgrass Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV*
Ga0070676_100053917	3300005328	Miscanthus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV*
Ga0070683_1012766771	3300005329	Corn Rhizosphere	ELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTKV*
Ga0070690_1000164516	3300005330	Switchgrass Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTKV*
Ga0066388_1048553601	3300005332	Tropical Forest Soil	MFHGRSATELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSASGAADLIRKELLTKV*
Ga0070677_100627624	3300005333	Miscanthus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAA
Ga0070680_1001968483	3300005336	Corn Rhizosphere	MFHGRSANELGWASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV*
Ga0070673_1016718061	3300005364	Switchgrass Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGGAADRLVATPRDTTVSTQGAADLIRKEFLTKV*
Ga0070703_100311262	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGADDVIRQEFLTKV*
Ga0070709_100729981	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTKV*
Ga0070711_1020100401	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVD
Ga0070700_1001212531	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEF
Ga0070708_1017307121	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MFRGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTKV*
Ga0070679_1003406822	3300005530	Corn Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTRV*
Ga0066905_1009426601	3300005713	Tropical Forest Soil	MFHGRSANELGLASAAVVLSLIQRLQKKGTLKREDALALLGDAADRLLATPRDTTVSASGAADLIRKEFLTKV*
Ga0066903_1022001964	3300005764	Tropical Forest Soil	MFRGRSANELSLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV*
Ga0068851_102482992	3300005834	Corn Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLLATPRDTTVSTSGAVDVIRQEFLTKV*
Ga0068870_103113882	3300005840	Miscanthus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKHEDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV*
Ga0075417_101943893	3300006049	Populus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV*
Ga0070712_1016755662	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIR
Ga0079222_100087663	3300006755	Agricultural Soil	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTLGAADLIRKEFLTKI*
Ga0075433_102434481	3300006852	Populus Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRKEFLTK
Ga0075429_1016418011	3300006880	Populus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEF
Ga0105244_101841302	3300009036	Miscanthus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTNV*
Ga0105250_100172872	3300009092	Switchgrass Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTKV*
Ga0105250_100760171	3300009092	Switchgrass Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAAERLVATRRDTTVSTSGAADLIRKEFL
Ga0111539_102830824	3300009094	Populus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRK
Ga0111539_105434323	3300009094	Populus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRK
Ga0114129_101915695	3300009147	Populus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFL
Ga0111538_131399931	3300009156	Populus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADL
Ga0126384_102993212	3300010046	Tropical Forest Soil	MFHGRSADELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRKEFLTRV*
Ga0126381_1010838501	3300010376	Tropical Forest Soil	MFHGRSADELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVTTSGAVDVIRKEFLTKV*
Ga0134124_106664741	3300010397	Terrestrial Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTQGAADLIRKEFLTK*
Ga0134127_100822355	3300010399	Terrestrial Soil	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFL
Ga0124844_10736983	3300010868	Tropical Forest Soil	MFHGRSADELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTKVSTSGAVDVIRKEFLTKV*
Ga0136633_11599831	3300012527	Polar Desert Sand	MFHGRSANEVALASAAIVLALVQRLEKKGTLKREDALALLGDAADRLVADPAQTTIATTGAADLIRKEFLPKV*
Ga0157304_10218571	3300012882	Soil	MFHRRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV*
Ga0157305_100904442	3300012891	Soil	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTASTSGAADLIRKEFLTKV*
Ga0157294_100247061	3300012892	Soil	GRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV*
Ga0157284_100649702	3300012893	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRREFLTKV*
Ga0157303_100134952	3300012896	Soil	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRREFLTKV*
Ga0157299_100688592	3300012899	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTKV*
Ga0157295_101288561	3300012906	Soil	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDMTVSTSGAADLIRKEFLTKV*
Ga0157374_111634982	3300013296	Miscanthus Rhizosphere	ASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLLATPRDTTGSTSGAADLIRKEFLTKV*
Ga0157375_129890561	3300013308	Miscanthus Rhizosphere	IMFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATRRDTTVSTSGAADLIRKEFLTKV*
Ga0132258_117285671	3300015371	Arabidopsis Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVI
Ga0132257_1003878312	3300015373	Arabidopsis Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRNTTVSTSGAADLIRKEFLTKV*
Ga0132255_1010819502	3300015374	Arabidopsis Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRKEFLTKV*
Ga0132255_1035809872	3300015374	Arabidopsis Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTQGAADLI
Ga0190272_124930581	3300018429	Soil	MFHGRSANEVALASAAIVLSLVQRLEKKGTLRREDALALLGDAADRLEADPAQTTSAATGAADLIRK
Ga0173481_100374932	3300019356	Soil	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRNTTVSTSGAADLIRKEFLTKV
Ga0173481_101011823	3300019356	Soil	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIR
Ga0173481_101671342	3300019356	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTASTSGAADLIRKEFLTKV
Ga0173482_100281303	3300019361	Soil	MFHRRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLT
Ga0173482_105643192	3300019361	Soil	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV
Ga0173479_102765742	3300019362	Soil	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRREFLTKV
Ga0247799_10136301	3300023072	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLT
Ga0247744_10428181	3300023073	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTKV
Ga0247794_101969641	3300024055	Soil	LGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRREFLTKV
Ga0209619_101442682	3300025159	Soil	MFHGRSANELGLASAAVTLSLVQRLVKKGTLKREDALALLGDAADRLVATPRDTTVSSTGAADLIRTEFVPKV
Ga0209108_100583114	3300025165	Soil	MFHGRSANELGLASAAVTLSLVQRLVKKGTLKREDALALLGDAADRLVATPRDTTVSSTCAA
Ga0209431_106300772	3300025313	Soil	MFHGRSANEVGLASAAVVFALVQRLVKKGTLNREDALALLGDAADRLVATPRDTTISTTGAADLIRKEFVPKV
Ga0207656_104950911	3300025321	Corn Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRNTTVSTSGAADLIRKEFLTKV
Ga0209751_109896771	3300025327	Soil	HGRSANEVGLASAAVVFALVQRLVKKGTLNREDALALLGDAADRLVATPRDTTISTTGAADLIRKEFVPKV
Ga0210132_10161901	3300025538	Natural And Restored Wetlands	MFHGRSANEVALASAAIVLALVQRLEKKGTLKHEDALAILGDAADRLIATPRDTTVSSTGAADLIRKEFLPKV
Ga0207680_103550413	3300025903	Switchgrass Rhizosphere	LGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV
Ga0207685_100807593	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLT
Ga0207654_103364611	3300025911	Corn Rhizosphere	FHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV
Ga0207671_108797442	3300025914	Corn Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATTRDTTVSTSGAVDVIRQEFLTKV
Ga0207660_101665813	3300025917	Corn Rhizosphere	MFHGRSANELGWASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV
Ga0207700_105739651	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTKV
Ga0207704_111291972	3300025938	Miscanthus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTQGAADLIRKEFLTKV
Ga0207661_106752622	3300025944	Corn Rhizosphere	GLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV
Ga0207712_100515811	3300025961	Switchgrass Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTWIKILE
Ga0207639_102157751	3300026041	Corn Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRNTTVSTSGAA
Ga0207639_108165122	3300026041	Corn Rhizosphere	RSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV
Ga0207702_100905891	3300026078	Corn Rhizosphere	HGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQEFLTKV
Ga0209983_11626881	3300027665	Arabidopsis Thaliana Rhizosphere	MFHGRSADELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAVDVIRQE
Ga0209073_100970442	3300027765	Agricultural Soil	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTLGAADLIRKEFLTKI
Ga0209177_103391862	3300027775	Agricultural Soil	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDAADRLVATPRDTTVSTLGAADLIRKDFLTKI
Ga0209814_104689131	3300027873	Populus Rhizosphere	MFHGRSANELGLASAAVVLSLIQRLERKGTLKREDALALLGDPADRLVATPRDTTVSTSGAADLIRKEFLTKV
Ga0307428_11882532	3300031280	Salt Marsh	MFHGRSANEVALASAAVVLALLQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSSTGAADLIRREFLSKV
Ga0307444_10166593	3300031360	Salt Marsh	MFHRRSANEVGLASAAVVLCLIQRLEKKGTLKREDALALLGDAADRLVATPPDTTVSMQGAADLIRQEFLTKV
Ga0307429_10294901	3300031368	Salt Marsh	MFHGRSANEVGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPHDTTVSMQRAADLIRQEFLTKV
Ga0307429_10327762	3300031368	Salt Marsh	MFHARSATELGLASAAVLLSLIQRLEKKGTLKREDALALLGDAADRLVTTPRDTTVSAQGAADLIRKEFLTKI
Ga0307429_11030511	3300031368	Salt Marsh	MLHERSANEVGLASAAVVFALLQRLVKKGTLKREDALALLGDAADKLVSNPRTTTVSMTGAADFIRKEFVPKF
Ga0307436_10229332	3300031563	Salt Marsh	MFHRRSANEVGLASAAVVLCLIQRLEKKGTLKREDALALLGDAADRLMATPPDTTVSMQGAADLIRQEFLTKV
Ga0315553_104336631	3300031652	Salt Marsh Sediment	SANEVGLASAAVVLCLIQRLEKKGTLKREDALALLGDAADRLVATPPDTTVSMQGAADLIRQEFLTKV
Ga0315537_11780621	3300031698	Salt Marsh Sediment	MFHRRSANEVGLTSAAVVLCLIQRLEKKGTLKREDALALLGDAADRLMATPPDTTVSMQGAADLIRREFLTKV
Ga0310813_117900981	3300031716	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTIKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLPKV
Ga0214473_102380113	3300031949	Soil	MFHGRSANEVALASAAIVLALVQRLEKKGTLRREDALALLGDAADRLEADPAQTTIAATGAADLIRKEFVPKV
Ga0214473_103048393	3300031949	Soil	MTMFHGRSANEVALASAAIVLALVQRLEKKGTLKREDALALLGDAADRLVADPGHTTVSATGAADLIRKEFVPKV
Ga0214473_111445661	3300031949	Soil	MFHGKSADEVALASAAIVLALVQRLEKKGTLRREDALALLGDAADRLVANPADTTASATGAADLIRKEFVPKV
Ga0214473_113635971	3300031949	Soil	MFHGRSANEVALASAAIVLALVQRLEKKGTLRREDALALLGDAADRLVADPAQTTIAATGAADLIRKEFVPKV
Ga0214473_120403781	3300031949	Soil	MFHGRSANEVALASAAIVLALVQRLEKKGTLKREDALALLGDAADRLVADPAQTTIAATGAADLIRKEFVPKF
Ga0326597_113275052	3300031965	Soil	MFHGRSANEVALASAAIVLALVQRLEKKGTLKREDALALLGDAADRLVADPGHTTVSATGAADLIRKEFVPKV
Ga0310890_114639671	3300032075	Soil	HGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKEFLTKV
Ga0310811_108037171	3300033475	Soil	MFHGRSANELGLASAAVVLSLIQRLEKKGTLKREDALALLGDAADRLVATPRDTTVSTSGAADLIRKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079004

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences