Metagenome / Metatranscriptome Family F078985

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F078985
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	70 residues
Representative Sequence	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIQADLATGRLDKAVQSALDDEKRGRVRPL
Number of Associated Samples	87
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.66 %
% of genes near scaffold ends (potentially truncated)	22.41 %
% of genes from short scaffolds (< 2000 bps)	75.86 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (88.793 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (49.138 % of family members)
Environment Ontology (ENVO)	Unclassified (48.276 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.586 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.64% β-sheet: 0.00% Coil/Unstructured: 45.36%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13376	OmdA	3.45
PF05163	DinB	2.59
PF06964	Alpha-L-AF_C	2.59
PF07617	DUF1579	1.72
PF05016	ParE_toxin	1.72
PF05495	zf-CHY	1.72
PF04519	Bactofilin	1.72
PF03061	4HBT	1.72
PF10067	DUF2306	0.86
PF04613	LpxD	0.86
PF13810	DUF4185	0.86
PF01381	HTH_3	0.86
PF13175	AAA_15	0.86
PF00158	Sigma54_activat	0.86
PF14534	DUF4440	0.86
PF12762	DDE_Tnp_IS1595	0.86
PF02518	HATPase_c	0.86
PF12704	MacB_PCD	0.86
PF02687	FtsX	0.86
PF07366	SnoaL	0.86
PF01425	Amidase	0.86
PF01578	Cytochrom_C_asm	0.86
PF14559	TPR_19	0.86
PF08818	DUF1801	0.86
PF00152	tRNA-synt_2	0.86
PF01402	RHH_1	0.86
PF13589	HATPase_c_3	0.86
PF04542	Sigma70_r2	0.86
PF01523	PmbA_TldD	0.86
PF03551	PadR	0.86
PF11008	DUF2846	0.86
PF04255	DUF433	0.86
PF00106	adh_short	0.86
PF00072	Response_reg	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3534	Alpha-L-arabinofuranosidase	Carbohydrate transport and metabolism [G]	2.59
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.59
COG4357	Uncharacterized conserved protein, contains Zn-finger domain of CHY type	Function unknown [S]	1.72
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.72
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.86
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.86
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.86
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.86
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.86
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.86
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.86
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.86
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.86
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.86
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.86
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.86
COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.86
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.86
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.86
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	51.72 %
Unclassified	root	N/A	11.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.31 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.48 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.48 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.48 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.86 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.48 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.72 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.86 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.48 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.72 %
Neorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Neorhizobium	0.86 %
Acinetobacter lwoffii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter lwoffii	0.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.48 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.72 %
Neorhizobium galegae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Neorhizobium → Neorhizobium galegae	0.86 %
Acinetobacter lwoffii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter lwoffii	0.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10025364	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300004080\|Ga0062385_10760550	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300004082\|Ga0062384_100348326	Not Available	937	Open in IMG/M
3300004091\|Ga0062387_100682230	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300004092\|Ga0062389_104177000	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300004631\|Ga0058899_11978507	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300005336\|Ga0070680_100383854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1196	Open in IMG/M
3300005518\|Ga0070699_101677303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Neorhizobium → Neorhizobium galegae	582	Open in IMG/M
3300005534\|Ga0070735_10018607	All Organisms → cellular organisms → Bacteria	5057	Open in IMG/M
3300005537\|Ga0070730_10013712	All Organisms → cellular organisms → Bacteria	6534	Open in IMG/M
3300005537\|Ga0070730_10017233	All Organisms → cellular organisms → Bacteria	5703	Open in IMG/M
3300005537\|Ga0070730_10047439	All Organisms → cellular organisms → Bacteria → Acidobacteria	3124	Open in IMG/M
3300005555\|Ga0066692_10160705	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300005586\|Ga0066691_10633751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter lwoffii	635	Open in IMG/M
3300005764\|Ga0066903_100155823	All Organisms → cellular organisms → Bacteria	3296	Open in IMG/M
3300005921\|Ga0070766_10534486	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300006176\|Ga0070765_100037440	All Organisms → cellular organisms → Bacteria	3848	Open in IMG/M
3300006804\|Ga0079221_10336291	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300006893\|Ga0073928_10000509	All Organisms → cellular organisms → Bacteria	91238	Open in IMG/M
3300006903\|Ga0075426_11189008	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300006914\|Ga0075436_100247754	All Organisms → cellular organisms → Bacteria → Proteobacteria	1268	Open in IMG/M
3300007258\|Ga0099793_10191922	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300009038\|Ga0099829_11523095	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300009088\|Ga0099830_10373761	All Organisms → cellular organisms → Bacteria → Acidobacteria	1149	Open in IMG/M
3300009088\|Ga0099830_10522034	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300009089\|Ga0099828_11017481	Not Available	738	Open in IMG/M
3300009089\|Ga0099828_11045782	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300009089\|Ga0099828_11062386	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300009090\|Ga0099827_10170606	All Organisms → cellular organisms → Bacteria → Acidobacteria	1793	Open in IMG/M
3300010343\|Ga0074044_10000687	All Organisms → cellular organisms → Bacteria	31710	Open in IMG/M
3300010343\|Ga0074044_10448971	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300010359\|Ga0126376_12917603	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300010877\|Ga0126356_10148010	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300011120\|Ga0150983_15872803	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300011269\|Ga0137392_10229042	All Organisms → cellular organisms → Bacteria → Acidobacteria	1526	Open in IMG/M
3300011269\|Ga0137392_10885897	Not Available	735	Open in IMG/M
3300011269\|Ga0137392_10933887	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300011270\|Ga0137391_10107615	All Organisms → cellular organisms → Bacteria → Acidobacteria	2416	Open in IMG/M
3300011271\|Ga0137393_11040534	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300011271\|Ga0137393_11486879	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300012096\|Ga0137389_10310472	All Organisms → cellular organisms → Bacteria → Acidobacteria	1336	Open in IMG/M
3300012189\|Ga0137388_10141846	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300012189\|Ga0137388_10721027	Not Available	926	Open in IMG/M
3300012198\|Ga0137364_10745842	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300012199\|Ga0137383_10018958	All Organisms → cellular organisms → Bacteria → Acidobacteria	4740	Open in IMG/M
3300012199\|Ga0137383_10120622	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300012202\|Ga0137363_11449186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300012203\|Ga0137399_11091199	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300012205\|Ga0137362_10013119	All Organisms → cellular organisms → Bacteria	6146	Open in IMG/M
3300012205\|Ga0137362_10018704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5292	Open in IMG/M
3300012206\|Ga0137380_10054403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3668	Open in IMG/M
3300012206\|Ga0137380_10135093	All Organisms → cellular organisms → Bacteria	2250	Open in IMG/M
3300012208\|Ga0137376_11090532	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300012209\|Ga0137379_10484764	Not Available	1145	Open in IMG/M
3300012210\|Ga0137378_10220931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1764	Open in IMG/M
3300012210\|Ga0137378_10252896	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300012211\|Ga0137377_11349512	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300012285\|Ga0137370_10263409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300012349\|Ga0137387_11226143	Not Available	528	Open in IMG/M
3300012351\|Ga0137386_10312778	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300012351\|Ga0137386_10453379	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300012351\|Ga0137386_10544570	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300012357\|Ga0137384_10289310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1364	Open in IMG/M
3300012359\|Ga0137385_10748250	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300012361\|Ga0137360_10365102	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1211	Open in IMG/M
3300012361\|Ga0137360_11207558	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300012363\|Ga0137390_10833855	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300012683\|Ga0137398_10625741	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300012918\|Ga0137396_10036930	All Organisms → cellular organisms → Bacteria → Acidobacteria	3277	Open in IMG/M
3300012925\|Ga0137419_10262980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300012927\|Ga0137416_10628607	All Organisms → cellular organisms → Bacteria → Acidobacteria	938	Open in IMG/M
3300012927\|Ga0137416_10829095	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300012986\|Ga0164304_11696413	Not Available	528	Open in IMG/M
3300014169\|Ga0181531_11081065	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300015051\|Ga0137414_1156745	All Organisms → cellular organisms → Bacteria	2845	Open in IMG/M
3300020199\|Ga0179592_10063370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1688	Open in IMG/M
3300020199\|Ga0179592_10139619	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300020579\|Ga0210407_10550361	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300020579\|Ga0210407_10805609	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300020580\|Ga0210403_10523638	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300020580\|Ga0210403_11369923	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300020583\|Ga0210401_10334496	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300021168\|Ga0210406_10468291	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000	Open in IMG/M
3300021171\|Ga0210405_10006462	All Organisms → cellular organisms → Bacteria → Acidobacteria	10447	Open in IMG/M
3300021178\|Ga0210408_10240319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1442	Open in IMG/M
3300021181\|Ga0210388_11288557	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300021407\|Ga0210383_10982085	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300021420\|Ga0210394_10035104	All Organisms → cellular organisms → Bacteria	4470	Open in IMG/M
3300021433\|Ga0210391_10660924	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300021559\|Ga0210409_10597212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300022557\|Ga0212123_10003080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	36415	Open in IMG/M
3300024290\|Ga0247667_1002366	All Organisms → cellular organisms → Bacteria → Acidobacteria	4275	Open in IMG/M
3300026333\|Ga0209158_1342483	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300026508\|Ga0257161_1139686	Not Available	509	Open in IMG/M
3300026551\|Ga0209648_10056419	All Organisms → cellular organisms → Bacteria	3344	Open in IMG/M
3300026551\|Ga0209648_10188693	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300027643\|Ga0209076_1082858	Not Available	912	Open in IMG/M
3300027725\|Ga0209178_1092159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300027729\|Ga0209248_10058362	All Organisms → cellular organisms → Bacteria → Proteobacteria	1179	Open in IMG/M
3300027795\|Ga0209139_10158101	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300027857\|Ga0209166_10002682	All Organisms → cellular organisms → Bacteria	13242	Open in IMG/M
3300027857\|Ga0209166_10003998	All Organisms → cellular organisms → Bacteria	10473	Open in IMG/M
3300027857\|Ga0209166_10032922	All Organisms → cellular organisms → Bacteria	3140	Open in IMG/M
3300027862\|Ga0209701_10037827	All Organisms → cellular organisms → Bacteria → Acidobacteria	3123	Open in IMG/M
3300027862\|Ga0209701_10223029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300027862\|Ga0209701_10370966	Not Available	805	Open in IMG/M
3300027875\|Ga0209283_10320647	Not Available	1020	Open in IMG/M
3300027875\|Ga0209283_10347591	Not Available	973	Open in IMG/M
3300028536\|Ga0137415_10353257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1273	Open in IMG/M
3300028536\|Ga0137415_11107861	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300028906\|Ga0308309_10093724	All Organisms → cellular organisms → Bacteria	2305	Open in IMG/M
3300031128\|Ga0170823_11299764	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300031708\|Ga0310686_103515126	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300031754\|Ga0307475_11364546	Not Available	547	Open in IMG/M
3300032180\|Ga0307471_102361639	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	671	Open in IMG/M
3300032893\|Ga0335069_10289927	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.28%
Host-Associated	Host-Associated	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.66%
Aquatic	Environmental → Aquatic	8.62%
Plants	Host-Associated → Plants	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.66%
Freshwater	Environmental → Aquatic → Freshwater	6.90%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.90%
Loam	Environmental → Terrestrial → Soil → Loam	6.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.59%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.59%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	49.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.93%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.59%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_100253644	3300004080	Bog Forest Soil	MSRKKIEEIAREIGTLTQEELEELRLWLDEYAGPRPLDRRIEADLAAGRLDATVQGALDDEKSARTRPL*
Ga0062385_107605502	3300004080	Bog Forest Soil	MGAKRVEEITRVIGTLTQEELEELRLWLDEYAGPRPIDRRIEGDLAAGRLDGAVQNALDDEKHGRVRPL*
Ga0062384_1003483262	3300004082	Bog Forest Soil	MSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDRRIEGDLAAGRLDGAVQNALDDEKHGRVRPL*
Ga0062387_1006822301	3300004091	Bog Forest Soil	MSGNRVQEIERAIGTLTQEELEELRSWLDQYAGPQPLDLRIEADLATGRLDGAVKSALDDEERGKVRPL*
Ga0062389_1041770001	3300004092	Bog Forest Soil	MSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDRRIEGDLAAGRLDGAVQNALDDEKHGR
Ga0058899_119785071	3300004631	Forest Soil	QELRAGVGHDMGGKRVEEIERVIGTLTQKELEELRLWLDGYAGPRPLDRRIAGDLAAGRLDAAVQGALDDEKHGRVRPL*
Ga0070680_1003838541	3300005336	Corn Rhizosphere	MNGKKVEEIERAIGTLTQEELEELRLWLDEYAGPRPLDRRIEGDLAAGRLDEVVQSALDDEKRGRVR
Ga0070699_1016773031	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNGKKIEEIERAIGTLTQEELEELRLWLDEYAGPRPIDRRIEADLTEGRLDAAVQSALEDEKRGRVRPL*
Ga0070735_100186074	3300005534	Surface Soil	MSRNKGDIERAIGTLTQDELEELRLWVDEYAGPRALDRRIETDLASSRLDEAVQSALDDERHGRVRPL*
Ga0070730_100137128	3300005537	Surface Soil	VDENFEWVQQMSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDRRIEGDLAAGWLDGAVQNALEDEKRGRVRPL*
Ga0070730_100172335	3300005537	Surface Soil	MAAKKIEEIERAIGTLTQEELEELRVWLDEYAGPRPLDLRIETDLAEGRLDTAVDRALDDETHSRTRPL*
Ga0070730_100474394	3300005537	Surface Soil	MSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDRRIEGDLAAGGLDGAVQNAQEDEKRGRLRPL*
Ga0066692_101607052	3300005555	Soil	MDGRRVEELQRAIGTLTQEELEELRLWLDEYAGPMPLDRSTKAHMAAGRLDNGVQGALDDEKRGRVRPL*
Ga0066691_106337511	3300005586	Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPTPLVRSIKADLAAGRLDKTVQSALDDEKRGKIRSL*
Ga0066903_1001558234	3300005764	Tropical Forest Soil	MAGKKVEEIERVIGTLTQEELQELRLWLDEYAGPRPLDQRIAADLTAGRLDEAVQGALVDEKRERERQL*
Ga0070766_105344862	3300005921	Soil	MNGKKVEEIERAIGTLTQEELEELRLWLDEYGGPRPLDRHIEADLAAGRLDEAVQSALDYEKRGRVRPL*
Ga0070765_1000374402	3300006176	Soil	MGAKKVEEITRVIGTLTQEELEELRLWLDEYAGPRPLDRRIEEDLAAGRLDVAVQSALDDEKHGRVRPL*
Ga0079221_103362912	3300006804	Agricultural Soil	MDGKKIEEIERAIGTLTQEELEELRLWLDEYAGPRPIDRRIEADLTEGRLDAAVQSALEDEKRGRVRPL*
Ga0073928_1000050960	3300006893	Iron-Sulfur Acid Spring	MSGKRVEEIERVIGTLTQEELEELRVWIDEYAGPRPLDRRIEEDLAVGRLDGAVQNALEDEKRGRVRPL*
Ga0075426_111890082	3300006903	Populus Rhizosphere	MAAKKIEEIERAIGTLTQEELEELRLWLDEYAGPRPLDLRIEADLAAGRLDETIDRALDDEKHSR
Ga0075436_1002477542	3300006914	Populus Rhizosphere	MAAKKIEEIERAIGTLTQEELEELRLWLDEYAGPRPLDLRIEADLAAGRLDETIDRALDDEKHSRIRPLRQIDHRATEHPPAHL*
Ga0099793_101919223	3300007258	Vadose Zone Soil	MSGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIEADLAVGRLDKAVQSALDDEKRGRVRPL*
Ga0099829_115230951	3300009038	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIEADLATGRLDKTVQSALD
Ga0099830_103737612	3300009088	Vadose Zone Soil	MFYSLELVQDMNGKKVEEVQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIETDLATGRLDKAVQTALHDEKRGRVRPL*
Ga0099830_105220342	3300009088	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPRPLDRRIKADLATGRLNKAVQSALDDEKRGRVRPL*
Ga0099828_110174812	3300009089	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGSSPLDRRIQGDLATGRLDKAVQSALDDEKRGRVGPL*
Ga0099828_110457821	3300009089	Vadose Zone Soil	MNGRKVEELQRTIGTLTQEELEELRLWLDEYAGPRPLDRRIKADLATGRLNKAVQSALDDEKRGRVRPL*
Ga0099828_110623862	3300009089	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPGPLDRRIEADLATGRLDKAVQTALDNEKRGRVRPL*
Ga0099827_101706062	3300009090	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPTPLDRHIKADLATGRMDKAVQSALDDEKRGRVRPLQMNGTSRHGRLLASLSSSPA*
Ga0074044_1000068723	3300010343	Bog Forest Soil	MSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDSRIEGDLATGRLDGAVQNALEDEKRGRVRPL*
Ga0074044_104489711	3300010343	Bog Forest Soil	MGAKRVEEITRVIGTLTQEELEELRLWLDEYAGPRPIDRRIEGDLAAGRLDGTVQNALEDEKHGRVRPL*
Ga0126376_129176031	3300010359	Tropical Forest Soil	MAGKKIEEIERVIGTLTQEELQELRLWLDEYAGPRPLDQRIAADLTAGRLDEAVQGALVDEKRERERQL*
Ga0126356_101480101	3300010877	Boreal Forest Soil	MDENSERVRQMSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDRTIEGDLAAGRLDRAVQNALEDEKRGRVRPL*
Ga0150983_158728031	3300011120	Forest Soil	ELRAGVGHDMGGKRVEEIERVIGTLTQKELEELRLWLDGYAGPRPLDRRIAGDLAAGRLDAAVQGALDDEKHGRVRPL*
Ga0137392_102290423	3300011269	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIEADLATGRLDKAVQTALDDEKRGTFLLSSILVSAF*
Ga0137392_108858971	3300011269	Vadose Zone Soil	KVEELQRAIGTLTQEELEELRLWLNEYAGPNPLDRRIQADLATGRLDKAVQTALDDEKRGTFLLSSILVSAF*
Ga0137392_109338871	3300011269	Vadose Zone Soil	QDMNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPRPLDRRIKADLATGRLNKAVQSALHDEQRGRVRPL*
Ga0137391_101076151	3300011270	Vadose Zone Soil	MNGRKVEELQRAIGMLTQEELEELRLWLDEYAGPSPLDHRIKADLATGRLDEAVQNALDDEKRGRVRPL*
Ga0137393_110405342	3300011271	Vadose Zone Soil	MNGRKVEELQRTIGMLTQEELEELRLWLDEYAGPRPLDRRIKADLATGRLDKAVQNALHDEKRGRVRPL*
Ga0137393_114868792	3300011271	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPAPLDRRIESDLAAGRLDKAVQSAL
Ga0137389_103104722	3300012096	Vadose Zone Soil	MNGKKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIEADLATGRLDKAVQSALDDEKRARVRPL*
Ga0137388_101418462	3300012189	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPGPLDRRIEADLATGRLDKAVQSALDDEKRARVRPL*
Ga0137388_107210272	3300012189	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLYEYAGPNPLDRRIQADLATGRLDKAVQTALDDEKRGTFLLSSILVSAF*
Ga0137364_107458422	3300012198	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEFAGPTPLDRRIQADLSTGRLDKAVQSALDDEKR
Ga0137383_100189584	3300012199	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPTPLDRRIQGDLATGRLDKAVQNALDDEKRGRVRPL*
Ga0137383_101206222	3300012199	Vadose Zone Soil	MDGRRVEELQRAIGTPTQEELEELRLWLDEYAGPMPLDRSIKADLAAGRLDEGVQGALDDEKRGRVRPL*
Ga0137363_114491862	3300012202	Vadose Zone Soil	MFYSLELAQDMNGRKVEEVQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIETDLATGRLDKTVQS
Ga0137399_110911992	3300012203	Vadose Zone Soil	MNGGKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIEANLATGRLDKAVQSALDDEKRGRVRPL*
Ga0137362_100131192	3300012205	Vadose Zone Soil	MFYSLELAQDMNGRKVEEVQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIETDLATGRLDKTVQSALHDEKRGRVRPL*
Ga0137362_100187045	3300012205	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPTPLDRRIKADLATGRLDKAVQSALDDEKRGRVHPL*
Ga0137380_100544034	3300012206	Vadose Zone Soil	MNGSKVEELQRAIGTLTQEELEELRLWLDEYAGPTPLDRRIQGDLATGRLDKAVQNALDDEKRGRVRPL*
Ga0137380_101350932	3300012206	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPTALDRRIKADLATGRLDKAVQSALDDEKRGRISPL*
Ga0137376_110905321	3300012208	Vadose Zone Soil	MDGRKVEELQRAIGTLTQEELEELRLWLDEYVGPTPLDRRIQGDLATGRLDKAVQNALDDEKRGRVRPL*
Ga0137379_104847643	3300012209	Vadose Zone Soil	MNGRKVEELQRAIGSLTQEELEELRLWLDEYAGPSPLDRHITADLATGRLDKTVQSALDDEKRGRIRPL*
Ga0137378_102209313	3300012210	Vadose Zone Soil	MNGRKVEELQRAIGALTQEELEELRLWLDEYAGPTPLDRRIKADLATGRLDKAVQSALDDEKRGRISPL*
Ga0137378_102528964	3300012210	Vadose Zone Soil	MDGRKVEELQRAIGSLTQEELEELRLWLDEYAGPAPLDRHITADLATGRLDKAVQSALDDEKRGRVRPL*
Ga0137377_113495122	3300012211	Vadose Zone Soil	MNGSKVEELQRAIGTLTQEELEELRLWLDEYVGPTPLDRRIQGDLATGRLDKAVQNALDDEKRGRVRPL*
Ga0137370_102634091	3300012285	Vadose Zone Soil	QDMNGRKVEELQRAIGTLTQEELEELRLWLDEFAGPTPLDRRIQADLSTGRLDKAVQSALDDEKRGRLRSL*
Ga0137387_112261431	3300012349	Vadose Zone Soil	GTLTQEELEELRLWLDEYAGPMPLDRSIKADLAAGRLDEGVQGALDDEKRGRVRPL*
Ga0137386_103127783	3300012351	Vadose Zone Soil	CFAGWNCERVQDMNGSKVEELQRAIGTLTQEELEELRLWLDEYAGPTPLDRRIQGDLATGRLDKAVQNALDDEKRGRVRPL*
Ga0137386_104533791	3300012351	Vadose Zone Soil	DMNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPTALDRRIKADLATGRLDKAVQSALDDEKRGRISPL*
Ga0137386_105445701	3300012351	Vadose Zone Soil	MDGRRVEELQRAIGTPTQEELEELRLWLDEYAGPMPLDRSTKAHLAAGRLDKGVQGALDDEKRGRVRPL*
Ga0137384_102893101	3300012357	Vadose Zone Soil	KVEELQRAIGTLTQEELEELRLWLDEYAGPTPLDRRIQGDLATGRLDKAVQNALDDEKRGRVRPL*
Ga0137385_107482501	3300012359	Vadose Zone Soil	IWVPIMVAKRIEDIKREIGTLTQDELEELRVWLDEYAGPRPLDLRIEADVVAGRLDKAIDRAIDDEKHSRVRPL*
Ga0137360_103651022	3300012361	Vadose Zone Soil	MNGRKVEELQRAIGSLTQEELEELRLWLDEYAGPAPLDRRIKADLATGRLDKAVQNALDDEKRGRVRPL*
Ga0137360_112075581	3300012361	Vadose Zone Soil	MNGRKVDELQRAIGTLTQEELEELRLWLDEYPGPAPLDHRIKADLATGRLDKAVQSALDDEKRGRVRPL*
Ga0137390_108338551	3300012363	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPRPLDRRIESDLAAGRLDKTVRSALHDEQRGR
Ga0137398_106257412	3300012683	Vadose Zone Soil	MFYSLELVQDMNGRKVEEVQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIETDLATGRLDKSVQSALHDEKRGRVRPL*
Ga0137396_100369305	3300012918	Vadose Zone Soil	MNGRKVEELQGAIGTLTQEELEELRLWLDEYAGPSPLDRRIEADLATGRLDKTVQSVLDDEKRGRVRPL*
Ga0137419_102629802	3300012925	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRTEADLATGRLDKAVQSALDDEKRGRVRPL*
Ga0137416_106286071	3300012927	Vadose Zone Soil	LTGKNYERAQDMSENRVEEIAPVIGTLTQEELEELRLWLDEYAGPRPLDRRIEGDLVAGRLDGAVQNALDDEKRRRVRPL*
Ga0137416_108290951	3300012927	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPRDRRIEADLATGRLDKTVQSVLDDEKRGRVRPL*
Ga0164304_116964131	3300012986	Soil	MNGKKVEEIERAIGTLTQEELEELRLWLDEYAGPRPLDRRIEADLAAGRLNEVVQSALDDEKHGRVRPL*
Ga0181531_110810651	3300014169	Bog	MSGNQVAEIERAIGQLTQDELDELRLWPEEYGGPSPLDRRFEADLRGGRLDEMVQGAIEDERNGRSRPL*
Ga0137414_11567455	3300015051	Vadose Zone Soil	RAIGTLTQEELEELRLWLDEYAGPSPLDRRIETDLATGRLDKSVQSALHDEKRGRVRPL*
Ga0179592_100633702	3300020199	Vadose Zone Soil	MSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDRAIEGDLAAGRLDGAVQNALEDEKRGRVRPL
Ga0179592_101396192	3300020199	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIQADLATGRLDKAVQSALDDEKRGRVRPL
Ga0210407_105503612	3300020579	Soil	MIGRKVEELQRAIGTLTHEELEELRLWLDEYAGPSPLDRRIEADLATGRLDKAVQTALDDEKRGTFLLFS
Ga0210407_108056092	3300020579	Soil	MSGNRVAEIERVIGTLTQEELEELRLWLDEYAGPRPLDRRIEGDLAAGRLDGAVQNALDDEKRGRVRPI
Ga0210403_105236382	3300020580	Soil	MGAKKVEEITRVIGTLTQEELEELRLWLDEYAGPRPLDRRIEADLAAGRLDGAVQNALDDEKHGRVRPL
Ga0210403_113699231	3300020580	Soil	MSGNRVAEIERVIGTLTQEELEELRLWLDEYAGPRPLDRRIEGDLAAGRLDGAVQNALDDEKRGRVRPL
Ga0210401_103344962	3300020583	Soil	MRDMGAKKVEEITRVIGTLTQEELEELRLWLDEYAGPRPLDRRIEADLAAGRLDGAVQNALDDEKHGRVRPL
Ga0210406_104682912	3300021168	Soil	MNGRKVEELQRAIGTLAQEELEELRLWLNEYAGPSPLGRRIEADLAMARLDQAIPSALHDEKRGRVRPL
Ga0210405_100064629	3300021171	Soil	MNGRKVEELQRTIGTLTQEELEELWLWLDEYTGPSPLDRRIESDLAAGRLGEAVQSALDDEKRGRVRPL
Ga0210408_102403192	3300021178	Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIQADLATGRLDKAVQTALDDEKRGTFLLSPF
Ga0210388_112885571	3300021181	Soil	MGAKKVEEITRVIGTLTQEELEELRLWLDEYAGPRPLDRRIEADLAAGRLDGAVQNALDD
Ga0210383_109820852	3300021407	Soil	MGAKKVEEITRVIGTLTQEELEELRLWLDEYAGPRPLDRRIAEDLAAGPLDVAVQGALDDEKHGRVRPL
Ga0210394_100351048	3300021420	Soil	MNGKKVEEIERAIGTLTQEELEELRLWLDEYAGPRPLDRRIEADLAAGQLDEAVQSALDDDS
Ga0210391_106609241	3300021433	Soil	MNGKKVEEIERAIGTLTQEELEELRLWLDEYAGPRPLDRRIEADLAAGRLDEAVQSALDDDS
Ga0210409_105972122	3300021559	Soil	RAIGTLTQEELEELRLWLDEYAGPSPLDRRIQADLATGRLDKAVQTALDDEKRGTFLLSP
Ga0212123_1000308014	3300022557	Iron-Sulfur Acid Spring	MSGKRVEEIERVIGTLTQEELEELRVWIDEYAGPRPLDRRIEEDLAVGRLDGAVQNALEDEKRGRVRPL
Ga0247667_10023662	3300024290	Soil	MSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDRTIEGDLAAGRLDGAVQNALEDEKRGRVRPL
Ga0209158_13424831	3300026333	Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPTPLVRSIKADLAAGRLDKTVQSALDDEKRGKIRSL
Ga0257161_11396862	3300026508	Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIEADLATGRLDKAVQSALDDEKRGR
Ga0209648_100564191	3300026551	Grasslands Soil	MNGKKVEEVQRVIGTLTQEELQELRLWLDEYAGPSPLDRRIETDLATGRLDKTVQTALHDEKRGRVRTL
Ga0209648_101886933	3300026551	Grasslands Soil	MNGSKVEELQRAIGTLTQEELEELRLWLDEYAGPTPLDRRIQGDLATGRLDKAVQNALDDEKRGRVRPL
Ga0209076_10828581	3300027643	Vadose Zone Soil	MSGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIEADLAVGRLDKAVQSALDDEKRGRVRPL
Ga0209178_10921592	3300027725	Agricultural Soil	MDGKKIEEIERAIGTLTQEELEELRLWLDEYAGPRPIDRRIEADLTEGRLDAAVQSALEDEKRGRVRPL
Ga0209248_100583623	3300027729	Bog Forest Soil	MGAKRVEEITRVIGTLTQEELEELRLWLDEYAGPRPIDRRIEGDLAAGRLDGAVQNALDDEKHGRVRPL
Ga0209139_101581012	3300027795	Bog Forest Soil	MSGNRVQEIERAIGTLTQEELEELRSWLDQYAGPQPLDLRIEADLATGRLDGAVKSALDDEERGKVRPL
Ga0209166_1000268211	3300027857	Surface Soil	MSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDRRIEGDLAAGWLDGAVQNALEDEKRGRVRPL
Ga0209166_100039986	3300027857	Surface Soil	VDENFEWVQQMSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDRRIEGDLAAGGLDGAVQNAQEDEKRGRLRPL
Ga0209166_100329223	3300027857	Surface Soil	MAAKKIEEIERAIGTLTQEELEELRVWLDEYAGPRPLDLRIETDLAEGRLDTAVDRALDDETHSRTRPL
Ga0209701_100378273	3300027862	Vadose Zone Soil	MFYSLELVQDMNGKKVEEVQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIETDLATGRLDKAVQTALHDEKRGRVRPL
Ga0209701_102230292	3300027862	Vadose Zone Soil	IIMFYSLELVQDMNGKKVEEVQRAIGTLTQEELEKLRLWLDEYAGPSPLDRRIETDLATDRLDKAVQTVMDDENRRRARPL
Ga0209701_103709662	3300027862	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPRPLDRRIEADLATGRLDKAVQSALDDEKRARVRPL
Ga0209283_103206472	3300027875	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPGPLDRRIEADLATGRLDKAVQTALDNEKRGRVRPL
Ga0209283_103475913	3300027875	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGSSPLDRRIQGDLATGRLDKAVQSALDDEKRGRVGPL
Ga0137415_103532571	3300028536	Vadose Zone Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRTEADLATGRLDKAVQSALDDEKRGRVRPL
Ga0137415_111078612	3300028536	Vadose Zone Soil	ERAQDMSENRVEEIAPVIGTLTQEELEELRLWLDEYAGPRPLDRRIEGDLVAGRLDGAVQNALDDEKRRRVRPL
Ga0308309_100937242	3300028906	Soil	MGAKKVEEITRVIGTLTQEELEELRLWLDEYAGPRPLDRRIEEDLAAGRLDVAVQSALDDEKHGRVRPL
Ga0170823_112997641	3300031128	Forest Soil	MRHAAREAESRPESVMICWVDENSERVRQMSGKRVEEIERVIGTLTQEELEELRLWLDEYAGPRPIDRTIEGDLAAGRLDGAVQNALEDEKRGRVRPL
Ga0310686_1035151261	3300031708	Soil	MSGKRVEEIERVIGTLTQKELEELRLWLDGYAGPRPLDRRIAGDLAAGRLDAAVQGAPDDEKHGRVRPL
Ga0307475_113645461	3300031754	Hardwood Forest Soil	MNGRKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIQSDLATGRLDKAVQSALDDEKRGRLLASLSSSPA
Ga0307471_1023616392	3300032180	Hardwood Forest Soil	MNGKKVEELQRAIGTLTQEELEELRLWLDEYAGPSPLDRRIEADLAAGRLDKAVQGALDDEKRGGFSFLLSSF
Ga0335069_102899272	3300032893	Soil	MSGKRVQQIKRAIGELTQEELEELRLWLDEYAGPSPLDLSISTDLFSGKLDKAIENVLDDEKHSRVRPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078985

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences