Metagenome / Metatranscriptome Family F078973

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078973
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	130 residues
Representative Sequence	MRQSLQQVRPERGRGGLGPAAIGGIAPLKAGVTTIGTRPVPSYGGRTMGALIWRQRAPQATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Number of Associated Samples	85
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.48 %
% of genes near scaffold ends (potentially truncated)	22.41 %
% of genes from short scaffolds (< 2000 bps)	72.41 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.759 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.965 % of family members)
Environment Ontology (ENVO)	Unclassified (24.138 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.379 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.78% β-sheet: 0.00% Coil/Unstructured: 65.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF08044	DUF1707	43.10
PF12697	Abhydrolase_6	4.31
PF00561	Abhydrolase_1	3.45
PF02768	DNA_pol3_beta_3	3.45
PF12840	HTH_20	1.72
PF01738	DLH	0.86
PF13683	rve_3	0.86
PF04314	PCuAC	0.86
PF00126	HTH_1	0.86
PF01022	HTH_5	0.86
PF12695	Abhydrolase_5	0.86
PF13560	HTH_31	0.86
PF13561	adh_short_C2	0.86
PF14200	RicinB_lectin_2	0.86
PF07690	MFS_1	0.86
PF13191	AAA_16	0.86
PF00072	Response_reg	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	3.45
COG2847	Copper(I)-binding protein	Inorganic ion transport and metabolism [P]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.76 %
Unclassified	root	N/A	42.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.76 %
Unclassified	root	N/A	42.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.76 %
Unclassified	root	N/A	42.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.72 %
Unclassified	root	N/A	42.24 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51.72 %
Unclassified	root	N/A	42.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.76 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.45 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.86 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.86 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.45 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.45 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.45 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.45 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.86 %
Propionicimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Propionicimonas	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.45 %
Streptomyces clavuligerus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	1.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Propionicimonas paludicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Propionicimonas → Propionicimonas paludicola	0.86 %
Streptomyces violaceusniger group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group	0.86 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.86 %
Micromonospora pisi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora pisi	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.45 %
Streptomyces clavuligerus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	1.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Streptomyces sp. SID7760	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. SID7760	0.86 %
Propionicimonas paludicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Propionicimonas → Propionicimonas paludicola	0.86 %
Streptomyces violaceusniger group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group	0.86 %
Micromonospora pisi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora pisi	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10161499	Not Available	940	Open in IMG/M
3300003219\|JGI26341J46601_10001921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6835	Open in IMG/M
3300003219\|JGI26341J46601_10018843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2263	Open in IMG/M
3300003368\|JGI26340J50214_10000738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11031	Open in IMG/M
3300003368\|JGI26340J50214_10134173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	623	Open in IMG/M
3300003505\|JGIcombinedJ51221_10067360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1390	Open in IMG/M
3300004091\|Ga0062387_100551229	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300004092\|Ga0062389_102618492	Not Available	671	Open in IMG/M
3300004092\|Ga0062389_103125888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300004152\|Ga0062386_100209814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1534	Open in IMG/M
3300005332\|Ga0066388_101962312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1048	Open in IMG/M
3300005445\|Ga0070708_100019786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5663	Open in IMG/M
3300005468\|Ga0070707_100007787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9950	Open in IMG/M
3300006028\|Ga0070717_11692174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Propionicimonas → Propionicimonas paludicola	572	Open in IMG/M
3300006050\|Ga0075028_100608192	Not Available	650	Open in IMG/M
3300006052\|Ga0075029_100617473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300006059\|Ga0075017_100355877	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300006059\|Ga0075017_100364691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1078	Open in IMG/M
3300006059\|Ga0075017_100418338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1007	Open in IMG/M
3300006059\|Ga0075017_100555327	Not Available	875	Open in IMG/M
3300006059\|Ga0075017_101417268	Not Available	547	Open in IMG/M
3300006086\|Ga0075019_10723302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	631	Open in IMG/M
3300006102\|Ga0075015_100941336	Not Available	526	Open in IMG/M
3300006176\|Ga0070765_100262139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1588	Open in IMG/M
3300009090\|Ga0099827_11479495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300012199\|Ga0137383_10001094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15582	Open in IMG/M
3300012199\|Ga0137383_10754503	Not Available	710	Open in IMG/M
3300012206\|Ga0137380_10000912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23128	Open in IMG/M
3300017821\|Ga0187812_1017771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2455	Open in IMG/M
3300017946\|Ga0187879_10058614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2254	Open in IMG/M
3300017959\|Ga0187779_10039336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2741	Open in IMG/M
3300017970\|Ga0187783_11285192	Not Available	527	Open in IMG/M
3300017972\|Ga0187781_10780932	Not Available	693	Open in IMG/M
3300017973\|Ga0187780_10195913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1407	Open in IMG/M
3300017974\|Ga0187777_10054837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2568	Open in IMG/M
3300017974\|Ga0187777_10331044	Not Available	1045	Open in IMG/M
3300017974\|Ga0187777_10748251	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300017975\|Ga0187782_11463031	Not Available	538	Open in IMG/M
3300018001\|Ga0187815_10051102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1740	Open in IMG/M
3300018007\|Ga0187805_10036344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2201	Open in IMG/M
3300018037\|Ga0187883_10636289	Not Available	555	Open in IMG/M
3300018058\|Ga0187766_11073369	Not Available	577	Open in IMG/M
3300018060\|Ga0187765_10365435	Not Available	882	Open in IMG/M
3300018060\|Ga0187765_10709647	Not Available	661	Open in IMG/M
3300018085\|Ga0187772_10479801	Not Available	874	Open in IMG/M
3300018086\|Ga0187769_10599210	Not Available	833	Open in IMG/M
3300018090\|Ga0187770_10117365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2003	Open in IMG/M
3300020579\|Ga0210407_11474663	Not Available	503	Open in IMG/M
3300020582\|Ga0210395_10643397	Not Available	795	Open in IMG/M
3300021171\|Ga0210405_10108338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2193	Open in IMG/M
3300021171\|Ga0210405_11045653	Not Available	613	Open in IMG/M
3300021178\|Ga0210408_10825625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	725	Open in IMG/M
3300021180\|Ga0210396_10410908	Not Available	1190	Open in IMG/M
3300021374\|Ga0213881_10019011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2838	Open in IMG/M
3300021374\|Ga0213881_10210474	Not Available	860	Open in IMG/M
3300021374\|Ga0213881_10294379	Not Available	724	Open in IMG/M
3300021377\|Ga0213874_10277346	Not Available	625	Open in IMG/M
3300021401\|Ga0210393_10090605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2429	Open in IMG/M
3300021401\|Ga0210393_10345656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300021402\|Ga0210385_10951790	Not Available	660	Open in IMG/M
3300021403\|Ga0210397_10963496	Not Available	661	Open in IMG/M
3300021403\|Ga0210397_10976496	Not Available	657	Open in IMG/M
3300021405\|Ga0210387_10125481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2173	Open in IMG/M
3300021406\|Ga0210386_10667469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group	897	Open in IMG/M
3300021407\|Ga0210383_10040951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3863	Open in IMG/M
3300021474\|Ga0210390_10064856	All Organisms → cellular organisms → Bacteria	3012	Open in IMG/M
3300021474\|Ga0210390_10851461	Not Available	752	Open in IMG/M
3300021477\|Ga0210398_10545350	Not Available	943	Open in IMG/M
3300021477\|Ga0210398_11529821	Not Available	519	Open in IMG/M
3300021478\|Ga0210402_10376101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1319	Open in IMG/M
3300021861\|Ga0213853_11563738	Not Available	537	Open in IMG/M
3300024225\|Ga0224572_1012180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1631	Open in IMG/M
3300024271\|Ga0224564_1073395	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300025910\|Ga0207684_10341382	Not Available	1290	Open in IMG/M
3300026551\|Ga0209648_10042990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3901	Open in IMG/M
3300027076\|Ga0208860_1025461	Not Available	611	Open in IMG/M
3300027625\|Ga0208044_1079550	Not Available	985	Open in IMG/M
3300027662\|Ga0208565_1240112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora pisi	507	Open in IMG/M
3300027696\|Ga0208696_1113539	Not Available	893	Open in IMG/M
3300027783\|Ga0209448_10058899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1291	Open in IMG/M
3300027812\|Ga0209656_10005080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8455	Open in IMG/M
3300027812\|Ga0209656_10015582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4714	Open in IMG/M
3300027812\|Ga0209656_10038808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2765	Open in IMG/M
3300027812\|Ga0209656_10093439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1593	Open in IMG/M
3300027824\|Ga0209040_10017791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4716	Open in IMG/M
3300027855\|Ga0209693_10009119	All Organisms → cellular organisms → Bacteria	4626	Open in IMG/M
3300027882\|Ga0209590_10011132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4218	Open in IMG/M
3300027882\|Ga0209590_10084485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1861	Open in IMG/M
3300027894\|Ga0209068_10599948	Not Available	641	Open in IMG/M
3300027898\|Ga0209067_10231178	Not Available	1001	Open in IMG/M
3300027905\|Ga0209415_10157855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2259	Open in IMG/M
3300027911\|Ga0209698_10755727	Not Available	737	Open in IMG/M
3300028015\|Ga0265353_1036209	Not Available	500	Open in IMG/M
3300028906\|Ga0308309_10144328	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300030494\|Ga0310037_10051488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1958	Open in IMG/M
3300030494\|Ga0310037_10095657	Not Available	1380	Open in IMG/M
3300030494\|Ga0310037_10160271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. SID7760	1016	Open in IMG/M
3300030494\|Ga0310037_10196393	Not Available	896	Open in IMG/M
3300030659\|Ga0316363_10206826	Not Available	815	Open in IMG/M
3300030706\|Ga0310039_10235065	Not Available	711	Open in IMG/M
3300030706\|Ga0310039_10261540	Not Available	664	Open in IMG/M
3300031561\|Ga0318528_10073506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1763	Open in IMG/M
3300031708\|Ga0310686_103693300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5545	Open in IMG/M
3300031747\|Ga0318502_10226839	Not Available	1086	Open in IMG/M
3300031910\|Ga0306923_11481309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	711	Open in IMG/M
3300031962\|Ga0307479_11338123	Not Available	676	Open in IMG/M
3300032067\|Ga0318524_10002826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	6580	Open in IMG/M
3300032160\|Ga0311301_10053983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9056	Open in IMG/M
3300032160\|Ga0311301_10098851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5732	Open in IMG/M
3300032160\|Ga0311301_10242253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2992	Open in IMG/M
3300032160\|Ga0311301_11107252	Not Available	1029	Open in IMG/M
3300032160\|Ga0311301_11283996	Not Available	927	Open in IMG/M
3300032160\|Ga0311301_11440120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	855	Open in IMG/M
3300032783\|Ga0335079_11309425	Not Available	723	Open in IMG/M
3300032828\|Ga0335080_10689135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1066	Open in IMG/M
3300033134\|Ga0335073_11205772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	759	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.28%
Host-Associated	Host-Associated	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.69%
Aquatic	Environmental → Aquatic	27.59%
Plants	Host-Associated → Plants	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.10%
Freshwater	Environmental → Aquatic → Freshwater	17.24%
Sediment	Environmental → Aquatic → Sediment	10.34%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.59%
Roots	Host-Associated → Plants → Roots	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.34%
Loam	Environmental → Terrestrial → Soil → Loam	8.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.59%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	15.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	12.07%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	12.07%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.59%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	2.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.72%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_101614992	3300001356	Peatlands Soil	MMRQSLQQVWPERTSGGLGPAAIGGIAPLKPGATTIGTRPAPSYGGRTMEVIWRRRAPQATFRQHVAGWRARNWRRAVLAWFVLSLIIMAVAAEPXTDFPKAQASSVPAVRMFLRVAGGLTAAGVPVLLIALP*
JGI26341J46601_100019211	3300003219	Bog Forest Soil	MMRQSLXQVWPERASRGLSXAAIGGIAPLKPGVTTIGTRPASSYGGRAMGVLIWRPRAPRATFRERVAGWRARNWRRAVLVWFVLSMIIMAVAAEPRTDFPKAQVRSVPAVGMVLRVAGGLTVAGVPVLLIA
JGI26341J46601_100188432	3300003219	Bog Forest Soil	MMRQSLQQVWPERTRGGLGAAAIGGIAPLKPGATTIGTRPAPSCGGRTMDVIWRQQAPRATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVAAEPRTDFPKAQASSVPAVRMFLRVAGGLTAAGVPVLLIALP*
JGI26340J50214_100007387	3300003368	Bog Forest Soil	MRQSLQQVRPERGLGGLGPAAIEGIAPLKAGVTTIGTRPVPSYGGRTMGALIWRQRAPQATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP*
JGI26340J50214_101341731	3300003368	Bog Forest Soil	MLLHRGEQQEEAMMGQALQQVWPERARGRLGSAAVGGIAPLKSGVTTIGTRPAPSYGRAMGGLVWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIVMALSAEPRTDFPKAQVRSVPAVQMVLRVAGGLTAAGVPVLLIALP*
JGIcombinedJ51221_100673602	3300003505	Forest Soil	MRQSLQQXWPERGHRGLGPAAIGGVVPLKSGVTTXGTRRVPSYGGRAMGVLTWRQRAPRATFRQRVAGWRARNWRRAVLAWFVLSLIVMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTVAGVPVLLIALP*
Ga0062387_1005512291	3300004091	Bog Forest Soil	QQVWPERGHRGLGPAAIGGIVPLKSGVTTIGTRPAPSYGGRAIGDLTWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVSAEPATDFPKAQAGSVPAVRMVLRVAGRLTVAGVPVLLIALP*
Ga0062389_1026184921	3300004092	Bog Forest Soil	MRQVWQERGRGGLGPAAIGRVAPLKAGVTAIGTRPALSYGGRATGVLTWRQRAPRASFRQRVAGWRARNWRRVVLAWFVLSLIIVAVAAEPATDFPKAQTSSVPAVRMVMRVAGGLTVAGVPVLLIALP*
Ga0062389_1031258881	3300004092	Bog Forest Soil	QQVWPERGHRGLGPAAIGGIVPLKSGVTTIGTRPAPSYGGRAIGDLTWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTVAGVPVLLIALP*
Ga0062386_1002098142	3300004152	Bog Forest Soil	MMGQALQQVWPERARGRLGSAAVGGIAPLKSGVTTIGTRPAPSYGRAMGGLVWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIVMALSAEPRTDFPKAQVRSVPAVQMVLRVAGGLTAAGVPVLLIALP*
Ga0066388_1019623122	3300005332	Tropical Forest Soil	MRQALQQAWPERGRVGTGPAIGGIEGAVPLNPGFTAVGTRLPDGGRSAAAIAWRQRAPRARAPFRQRLAEWRARNWRRVVLAWFVLSLIIMAVAAEPSTDFPKAQARSVPAVQTFLRVAGGLTVAGVPVLLIALP*
Ga0070708_1000197864	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMRQSLQHVWPERGHRGLSPSPVQGITPLKAGATAVGARPSPFYRGRTMEVVVWRQRAPKVPFRQRVAGWRARNWRRAVLAWFVLSLIVMAASAEPASYFPRAQARSVPAVGMVLHVAGGFTAAGVPMVLIALP*
Ga0070707_1000077876	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MMRQSLQHVWPERGHRGLSPSPVQGITPLKAGATAVGARPSPFYRGRTMEVVVWRQRAPQVPFRQRVAGWRARNWRRAVLAWFVLSLIVMAASAEPASYFPRAQARSVPAVGMVLHVAGGFTAAGVPMVLIALP*
Ga0070717_116921741	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MMRKSLQHVWPERGHRGLSPSPVQGITPLKAGATAVGARPSPFYRGRTMEVVVWRQRAPQVPFRQRVAGWRARNWRRAVLAWFVLSLIVMAASAEPASYFPRAQARSVPAVGMVLHVAGGFTAAGVPMVLIALP*
Ga0075028_1006081921	3300006050	Watersheds	MMRQSLQQVWPERGHRGLGPAAIGGIVTLKSGVTTIGTRPAPSYGGRALGVLIWRQRAPQDTFRQRVAGWRARNWRRAVLAWFVLSLIVMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTVAGVPVLLIALP*
Ga0075029_1006174731	3300006052	Watersheds	MRQSLQQVWPERGRGGLGPSAIGGIAPLRAGAATIGTRPVPSYGGRVMGALSWRQRAPRATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPKTDFPKAQARSVPAVGMVLRVAGGLTAAGIPVLLIALP*
Ga0075017_1003558772	3300006059	Watersheds	MRQSLQQVRPERGRGGLGPAAIGGMAPLKAVVTTIGTRPVPSYGGRTVGALIWRQRAPQATFRQRVVGWRARNWRRAVLTWFVLSLIVMAVSAEPRTDFPKAQARSVPAVGMVLRVAGGLTVAGVPVLLIALP*
Ga0075017_1003646912	3300006059	Watersheds	MMRQSLQQVWPERARDGLGPAAIGRIAPLKSGVTTIGTRPAPSYGGRAMAVLIWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVAAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPLLLIALP*
Ga0075017_1004183382	3300006059	Watersheds	MMRQSLQQVWPERGHGGLGPAAIGGIVPLKSGVTTIGTRPAPSYGGRAVGVLSWRQRAPRDTFRQRVAGWRARNWRRAVLAWFVLSLIIMAVSAEPVTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP*
Ga0075017_1005553272	3300006059	Watersheds	MMLQQVARERGRGGPGPAAIGGIAPLNAGVATIGTRPAPSYGGRATGVLIWRQRAPRVSFRQRVAAWRARNWRRAVLAWFVSSLIIMAVAAEPATDFPKAQARSVPAVQMVLRVTGGLIAAGVPVLLIALP*
Ga0075017_1014172681	3300006059	Watersheds	IAPLKAGVTTIGTRPVPSYGGRTMGALIWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIVMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTAAGVPVLLIALP*
Ga0075019_107233021	3300006086	Watersheds	MRQSLQQVWPERGRGGLGPSAIGGIAPLRPGAVTIGTRPVPSYGGRVMGALSWRQRAPRATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPKTDFPKAQARSVPAVGMVLRVAGGLTAAGIPVLLIALP*
Ga0075015_1009413362	3300006102	Watersheds	LGPAAIGGIAPLKAGATPIGTRPVPSYGGRTMGALIWRQRAPQATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP*
Ga0070765_1002621392	3300006176	Soil	MRQALQQVWPERGRGGLGPAAIGGIAPLKAGVTTLGSRPAPSYGGRIWRQRVPQTTFRERVAGWRARNWRRAVLAWFVLSLIILAVAAEPRTDFPKAQVRSVPAVRMFLRVAGGLTAAGVPILLIALP*
Ga0099827_114794952	3300009090	Vadose Zone Soil	RQVLQQERGRGGMGSAAIGGLVPLQPGATTVGTRAVPSYRGRPARVIAWRRRAPRASFRQRIAGWRARNWRRAVLAWFVLSLIIMAVAAEPKTDFPKAQARSVPAVRMVLRVAGGLTVAGVPVLLIALP*
Ga0137383_100010949	3300012199	Vadose Zone Soil	MMRQVLEQERGRGGMGSAAIGDMVPLQPGATTIGTRAIPSYRGRPAGGIAWRQRAPRASSRQRLAGWRARNWRRAVLAWFVLSLIIMAVAAEPKTDFPKAQARSVPAVRMVLRVAGGLTVAGVPVLLIALP*
Ga0137383_107545032	3300012199	Vadose Zone Soil	MIRQVLQQERGRGEMGSAAIGGIVPLQPGASAIATRAVPWYRGRTTGAVGWRQRASRAPVRQRVAGWRARNWRRAVLAWFVLSLIVMAVAAEPVTDFPKAQARSVPAVRMILRVAGGLTVAGVPVLLIALP*
Ga0137380_1000091221	3300012206	Vadose Zone Soil	MVPLKPGAAAIGTPAVPSYRGRTAGGITWRQRAPRAPFRQRVAAWRARNWRRAVLTWFVLSLIVMAVAAEPAADFPKAQARSVPAVRMVLRVAGGLTVAGVPVLLVALP*
Ga0187812_10177714	3300017821	Freshwater Sediment	MRQSLQQVWPVRGRGGLGPPAIRGIAPLKAGAATIGTRPVPSYGGRVMGALTWRQRAPQATFRQRVVGWRARNWRRAVLTWFVLSLIIMAVAAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0187879_100586144	3300017946	Peatland	MRQSLQQVRPERGRGGLGPAAIGGIAPLKAGATTIGTRPVPSYGGRTMGALIWRQRAPQATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPKTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0187779_100393362	3300017959	Tropical Peatland	MRQSLQQVWPGSGRAGLGPAAIGGVAPLQSGVTTIRTRPVPSYGGRATRAIVWRQRKPRVSLWGRVADWRARNWRRVVLIWFVLSLIVMAFAAEPKTDFPKAQAHSVPAVQMVLRVAGGLTVAGVPVLLIALP
Ga0187783_112851921	3300017970	Tropical Peatland	MVQQVLPKGRRGGLGPATIGGIASLKPGVTTIGARSAASYGGRAMGVVLWRQRAPRAPFRQRVAEWRARNWRRAVLAWFVLSLIIMAVTAEPKADFPKAQARSVHAVQMVLRVAGGLTVAGVPILLIALP
Ga0187781_107809321	3300017972	Tropical Peatland	MMRQSLQQVWPRGGRGGLGPATSGGIASLQSGATTIGARQAPSYGGRAMAVVLWRQRAPQVPFRQRVADWRARNWRRAVLAWFVLSLIIMAVAAEPKTDFPKAQASSVPAVRMILRVTGVLTAAGVPLLLIALP
Ga0187780_101959133	3300017973	Tropical Peatland	MRQSLQQVWPGSGRAGLGPAAIGGVAPLQSGVTTIRTRPVPSYGGRATRAIVWRQRKPRVSLWARVADWRARNWRRVVLIWFVLSLIVMAFAAEPKTDFPKAQAHSVPAVQMVLRVAGGLTVAGVP
Ga0187777_100548372	3300017974	Tropical Peatland	MRQSLQQVWPGSGRAGLGPAAIGGVAPLQSGVTTIRTRPVPSYGGRATRAIVWRQRKPRVSLWARVADWRARNWRRVVLIWFVLSLIVMAFAAEPKTDFPKAQAHSVPAVQMVLRVAGGLTVAGVPVLLIALP
Ga0187777_103310441	3300017974	Tropical Peatland	MRQSLQQVWPQGGRGGLSPAASGGIASLQPGVTTIGARPAPPYGGRAMGVVVWRQRAPQVPFRRRVAGWRARNWRRAVLAWFVLSLIIMAVAAEPKTDFPKAQASSVPAVRMILRVTGGLTAAGVPLLLIALP
Ga0187777_107482512	3300017974	Tropical Peatland	MHQMLQQVRQGRGRLSPAAIGGIAPLKSGVAAGGTLSARSYGGRTTGAIAWRQRTPRISFRHRLAGWRARNWRRAVLAWFVLSLAILAITAEPKTDFPKAQAGSVPAVGVVMRVAGGLTVAGVPLLLIALP
Ga0187782_114630311	3300017975	Tropical Peatland	MAQQVWPEGRRGGLGPATIGGIASLKPGVTTIGARSAASYGGRAMGVVLWRQRAPRAPFRQRVAEWRARNWRRAVLAWFVLSLIILAVAAEPKTDFPKAQARSVPAVQIVLRVAG
Ga0187815_100511022	3300018001	Freshwater Sediment	MRQSLQQVWPVRGRGGLGPPAIRGIAPLKAGAATIGTRPVPSYGGRVMGALIWRQRAPQATFRQRVVGWRARNWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0187805_100363444	3300018007	Freshwater Sediment	MRQSLQQVWPARGRGGLGPPAIGGIASLKVGAATIGTRPVPSYGGRVMGALTWRQRAPQATFRQRVVGWRARNWRRAVLTWFVLSLIIMAVAAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0187883_106362891	3300018037	Peatland	MRQSLQQVRPERGRGGLGPAAIGGIAPLKAGATTIGTRPVPSYGGRTMGALIWRQRAPQATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPKTDFPKAQARSVPAVRMV
Ga0187766_110733691	3300018058	Tropical Peatland	MRQSLQQVWPGSGRAGLGPAAIGGIAPLQSGVTTIRTRPVPTYGGRATRAIVWRQRKPRVSLWARVADWRARNWRRVVLIWFVLSLIVMAFAAEPKTDFPKAQAHSVPAVQMVLRVAGGLTVAGV
Ga0187765_103654351	3300018060	Tropical Peatland	MRQSLQQVWPGSGRAGLGPAAIGRIAPLQSGVTAIGTRPVPSYGGWAAGAIGWRRRTPQVSFRQRLAGWRARNWRRVVLMWFVLSLIIMAVAAEPKSDFPKAQAGSVPAVQTILRVAGGLTVAGVPVLLVALP
Ga0187765_107096471	3300018060	Tropical Peatland	MVQQVWPEGGRGGLGPAAIGGIASLKPGVTIGARPAPSYGGRAMGVVLWRQRVPRAPFRERVAAWRARNWRRAVLAWFVLSLIILAVAAEPKTDFPKAQARSVPAVRMVLRVVGGLTVAGVPILLIALP
Ga0187772_104798012	3300018085	Tropical Peatland	MMRQSLQQVWPRGGRGGLGPATSGGIASLQSGATTIGARQAPSYGGRAMAVALWRQRAPQVPFRQRVADWRARNWRRAVLAWFVLSLIIMVVAAEPKTDFPKAQAGSVPAVRMVLRVTGGVTAAGVPLLLIALP
Ga0187769_105992102	3300018086	Tropical Peatland	KGGRGGLGPAPFGGMAPLKSGATTIGAQPARSYGGRAMEVVVWRQRAPQVPFRQRVADWRARNWRRAVLAWFVLSLIIMAVAAEPKTDFPKAQASSVPAVRMILRVTGVLTAAGVPLLLIALP
Ga0187770_101173654	3300018090	Tropical Peatland	MMRQSLQQVWPRGGRGGLGPATSGGIASLQSGATTIGARQAPSYGGRAMAVVLWRQRAPQVPFRQRVADWRARNWRRAVLAWFVLSLIIMVVAAEPTTDFPKAQAGSVPAVRMILRVTGGVTAAGVPRLLIALP
Ga0210407_114746631	3300020579	Soil	MRQVWQERGRGGLGPAAIGRVAPLKAGVTAIGTRPALSYGGRATGILVWRQRAPRASFRQRVAGWRARNWRRVVLAWFVLSLIVVAVAAEPATDFPKAQTSSVPAVRMVMRVAGGLTVAGVPVLL
Ga0210395_106433971	3300020582	Soil	MRQVWQERGRGGLGPAAIGRVAPLKAGVTAIGTRPALSYGGRATGILVWRQRAPRVSFRQRVAGWRARNWRRVVLAWFVLSLIIMAVAAEPATDFPKAQTSSVPAVRMVMRVAGGLTVAGVPVLLIALP
Ga0210405_101083382	3300021171	Soil	MRQVWQERGRGGLGPAAIGRVAPLKAGVTAIGTRPALSYGGRATGILVWRQRAPRVSFRQRVAGWRARNWRRVVLAWFVLSLIIVAVAAEPATDFPKAQTSSVPAVRMVMRVAGGLTVAGVPVLLIALP
Ga0210405_110456531	3300021171	Soil	MRQSLQQVWPERGRRGLSPASLGVIAPLKPGVSTLGTRPVPSYGGRAVGALIWRQRAPQASFRQRVIGWRARNWRRAVLTWFVLSLIIMAVAAEPRTDFPKAQARSVPAVRMFLRVAGGLTAAGVPMLLIALP
Ga0210408_108256252	3300021178	Soil	APLKPGVSALGTRPVPSYGGRALGALTWRQRAPQTSFRQRVVGWRTRNWRRAVLTWFVLSLIIMAVAAEPKTDFPKAQARSVPAVRMFMRVAGGLTAAGVPVLLIALP
Ga0210396_104109082	3300021180	Soil	QVWQERGRGGLGSAAIGRAAPLKAGVTAIGTRPALSYGGRAGSLSWRQRAPRASFRQRVAGWRARNWRRVVLAWFVLSLIVVAVAAEPATDFPKAQTGSVPAVRMVMRVAGGLTVAGVPVLLIALP
Ga0213881_100190114	3300021374	Exposed Rock	MRQSLQQMWPARGRGGLSPVAFGKIIPLKPGVSTVGTRSAPSCGGRTMGAVSWRRRAPHIPIRQRAASWRARNWRRALLAWFVLSLIVLAIAGEPRTDFPKAQARSVPAVRMVLRVAGGLTVAGVPVLLIALP
Ga0213881_102104742	3300021374	Exposed Rock	MMRQSLQQVWPEDGRGGLASLPSGVTCLDARPAASYGGRAAGAIVWRQRVPRASFQARLAGWRVRLAGWRARNWRRAVLAWFVMSLIILAMAAEPKTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0213881_102943792	3300021374	Exposed Rock	MVQQVLPEGGRRGLGPARFGGIARLKSGVTAIRAQPALSHGGRAMEIVAWRERAPRATFQERLVGWRQPLAEWRERLAGWRARNWRRAVLAWFVLSLIVMAVAAEPKADFPKAQAHSMPAVQMVLRVAGALTAAGVPVLL
Ga0213874_102773461	3300021377	Plant Roots	MVQQVWPEGGRGGLGPAAIGGIASLKSGVTTIGARPAPSYGARATGVVVWRQRAPRAPFRQRVADWRARNWRRAVLAWFVLSLIIVATAAEPRTAFPRAEAGSVPVVGTVLRVAGGLTVAGVPLVLVTLP
Ga0210393_100906052	3300021401	Soil	MRQVWQERGRGGLGPAAIGRAVPLKAGVTVIGTRPALSYGGRAGVLSWRQRAPRASFRQRVAGWRARNWRRVVLAWFVLSLIIVAVAAEPATDFPKAQTSSVPAVRMVMRVAGGLTVAGVPVLLIALP
Ga0210393_103456562	3300021401	Soil	MRQSLQQAWPERGHRGLGPAAIGGVVPLKSGVTTIGTRRVPSYGGRAMGVLTWRQRAPRATFRQRVAGWRARNWRRAVLAWFVLSLIVMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTVAGVPVLLIALP
Ga0210385_109517901	3300021402	Soil	GGAIMRQSLQQVWPERGHGGLGPAAIGGIVPLKSGATAVGTRPAPSYGGRTIGVLTWRQRAPQATFRQRVAGWRARNWRRALLAWFVLSLIIMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTVAGVPVLLIALP
Ga0210397_109634961	3300021403	Soil	MRQVWQERGRGGLGSAAIGRAAPLKAGVTAIGTRPALSYGGRAGGLSWRQRAPRASFRQRVAGWRARNWRRVVLAWFVLSLIVVAVAAEPATDFPKAQTGSVPAVRMVMRVAGGLTVAGVPVLLIALP
Ga0210397_109764962	3300021403	Soil	MRQVWQERGRGGLGPAAMEGIAPLKAGVTTLGTRPVPSYGGRAMGVVIWRQRAPRVPFRQRVAAWRARNWRRAVLAWFVLSLIIVAVSAEPATDFPRAQARSVPAVRMVLRVAGGLTVAGVPVLLIALP
Ga0210387_101254812	3300021405	Soil	MRQVWQERGRGGLGSAAIGRPAPLKAGVTAIGTRPALSYGGRAGSLSWRQRAPRASFRQRVAGWRARNWRRVVLAWFVLSLIVVAVAAEPATDFPKAQTGSVPAVRMVMRVAGGLTVAGVPVLLIALP
Ga0210386_106674691	3300021406	Soil	ASGTVGGKMRQVWQERGRGGLGPAAIGRVAPLKAGVTAIGTRPALSYGARATGILVWRQRAPRASFRQRVAGWRARNWRRVVLAWFVLSLIIMAVAAEPATDFPKAQTSSVPAVRMVMRVAGGLTVAGVPVLLIALP
Ga0210383_100409514	3300021407	Soil	MRQVWQERGRGGLGPAAIGRVAPLKAGVTAIGTRPALSYGARATGILVWRQRAPRASFRQRVAGWRARNWRRVVLAWFVLSLIIMAVAAEPATDFPKAQTSSVPAVRMVMRVAGGLTVAGVPVLLIALP
Ga0210390_100648563	3300021474	Soil	MRQSLQQVWPERGHGGLGPAAIGGIVPLKSGATTVGTRPAPSYGGRTIGVLTWRQRAPQATFRKRVAGWRARNWRRALLAWFVLSLIIMAVSAEPATDFPKAQAGSVPAVRMVLRVTGGLTVAGVPVLLIALP
Ga0210390_108514612	3300021474	Soil	MRQSLQHVRPERARGGPGPAVIGLVAPVKPGVTTIGTRPALSYGGRAVGVLIWRQRAPQATFRQRIAGWRARNWRRAVLAWFALSLIIMAVAAEPRTDFPKAQARSVPAVRMVLRVAGGLTAVGVPMLLIALP
Ga0210398_105453502	3300021477	Soil	MRQSLQQVWPERGHRGLGPAAIGGIVPLKSGATAVGTRPAPSYGGRTIGVLTWRQRAPQATFRKRVAGWRARNWRRALLAWFVLSLIIMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTVAGVPVLLIALP
Ga0210398_115298212	3300021477	Soil	QVWQERGRGRLGPAAIGRVAPLKAGVTAIGTRPALSYGGRATGILVWRQRAPWASFRQRVAGWRARNWRRAVLAWFVLTLAIMAVSAEPGADFPKAQASSVPAARMVLHVTSVVTVAGGPILLIALP
Ga0210402_103761012	3300021478	Soil	MRQVWQERGLGGLGPAAIGRVAPLKAGVTAIGTRPALSYGARATGILVWRQRAPRASFRQRVAGWRARNWRRVVLAWFVLSLIIVAVAAEPATDFPKAQTSSVPAVRMVMRVAGGLTVAGVPVLLIALP
Ga0213853_115637381	3300021861	Watersheds	MMLQQVARERGRGGPGPAAIGGIAPLNAGVTTIGTRPAPSYGGRATGVVIRRQRAPRVSFRQRVAAWRARNWRRAVLAWFVSSLIIMAVAAEPATDFPKAQARSVPAVGIVLRVAGGLTAAGVPVLLIALP
Ga0224572_10121802	3300024225	Rhizosphere	MRQSLQQVWPERGHGGLGSAAIGGIVPLKSGATTVGTRPAPSYGGRTIGVPTWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVSAEPATDFPKAQAGSVPAVRMVLHVAGGLTVAGVPMLLIALP
Ga0224564_10733951	3300024271	Soil	QVWPERGHGGLGSAAIGGIVPLKSGATTVGTRPAPSYGGRTIGVPTWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVSAEPATDFPKAQAGSVPAVRMVLHVAGGLTVAGVPMLLIALP
Ga0207684_103413821	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMRQSLQHVWPERGHRGLSPSPVQGITPLKAGATAVGARPSPFYRGRTMEVVVWRQRAPKVPFRQRVAGWRARNWRRAVLAWFVLSLIVMAASAEPASYFPRAQARSVPAVGMVLHVAGGFTAAGVPMVLIALP
Ga0209648_100429904	3300026551	Grasslands Soil	MRQSLQHLWPERGQRGLGPSPIRGTVLLKAGPTALGTRPAPFYGGRTMEVVVWRQRAPRVPLRQRVAGWRARHWRRAVLAWFVLSLIIMAASAEPASYFPKAQARSVPAVGMVLHVAGGLTVAGVPVLLIALP
Ga0208860_10254612	3300027076	Forest Soil	IVPLKPGVTTIGTRPAPSYGGRAMGVLVWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVAAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0208044_10795502	3300027625	Peatlands Soil	MMRQSLQQVWPERTSGGLGPAAIWGIAPLKPGATTIGTRPAPSYGGRTMEVIWRRRAPQATFRQHVAGWRARNWRRAVLAWFVLSLIIMAVAAEPRTDFPKAQASSVPAVRMFLRVAGGLTAAGVPVLLIALP
Ga0208565_12401121	3300027662	Peatlands Soil	IGVAAPVKPGVTTIGARPAPSYGGRAMGVLIWRQRAPRATFRQRVVGWRARNWRRAVLAWFVLSLIIMAVSAEPRTDFPKAQARPVPAVRMVLRVAGGLTAVGVPMLLIVLP
Ga0208696_11135392	3300027696	Peatlands Soil	MMRQSLQQVWPERTSGGLGPAAIGGIAPLKPGATTIGTRPAPSYGGRTMEVIWRRRAPQATFRQHVAGWRARNWRRAVLAWFVLSLIIMAVAAEPRTDFPKAQASSVPAVRMFLRVAGGLTAAGVPVLLIALP
Ga0209448_100588991	3300027783	Bog Forest Soil	MMRQSLQQVWPERGRGGLGPAAIGGIVPLKPGVTTIGTRPAPSYGGRAMGVLSWRQRAPRATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVGMVLRVAGGLTAAGIPVLLIALP
Ga0209656_100050804	3300027812	Bog Forest Soil	MRQSLQQVRPERGLGGLGPAAIEGIAPLKAGVTTIGTRPVPSYGGRTMGALIWRQRAPQATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0209656_100155827	3300027812	Bog Forest Soil	MMRQSLQQVWPERASRGLSPAAIGGIAPLKPGVTTIGTRPASSYGGRAMGVLIWRPRAPRATFRERVAGWRARNWRRAVLVWFVLSMIIMAVAAEPRTDFPKAQVRSVPAVGMVLRVAGGLTVAGVPVLLIALP
Ga0209656_100388083	3300027812	Bog Forest Soil	MMGQALQQVWPERARGRLGSAAVGGIAPLKSGVTTIGTRPAPSYGRAMGGLVWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIVMALSAEPRTDFPKAQVRSVPAVQMVLRVAGGLTAAGVPVLLIALP
Ga0209656_100934392	3300027812	Bog Forest Soil	MMRQSLQQVWPERTRGGLGAAAIGGIAPLKPGATTIGTRPAPSCGGRTMDVIWRQQAPRATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVAAEPRTDFPKAQASSVPAVRMFLRVAGGLTAAGVPVLLIALP
Ga0209040_100177917	3300027824	Bog Forest Soil	MMRQSLQQVWPERASRGLSPAAIGGIAPLKPGVTTIGTRPASSYGGRAMGVLIWRPRAPRATFRERVAGWRARNWRRAVLVWFVLSMIIMAVAAEPRTDFPKAQVRSVPAVGMVLRVAGGLTVAGVPVLLIA
Ga0209693_100091192	3300027855	Soil	MRQVWQERGRGGLGSAAIGRPAPLKAGVTAIGTRPALSYGGRAMGVLVWRQRAPRASFRQRVAGWRARNWRRAVLAWFVLTLAIMAVAAEPAADFPKAQLSSVPAVRVVLRTAAVLTVGGVPVVLAALP
Ga0209590_100111326	3300027882	Vadose Zone Soil	MRQSLQHVWPERGQRGLGPSPIRGTALLKAGPTALGTRPAPFYGGRTTEVVVWRQRAPRVPLRQRVAGWRARNWRRAVLAWFVLSLIIMAASAEPASYFPKAQARSVPAVGMVLHVAGGLTMAGVPVLLIALP
Ga0209590_100844852	3300027882	Vadose Zone Soil	MMRQVLEQERGRGGMGSAAIGDMVPLQPGATTIGTRAIPSYRGRPAGVIAWRQRAPRASSWQRLAGWRARNWRRAVLAWFVLSLIIMAVAAEPKTDFPKAQARSVPAVRMVLRVAGGLTVAGVPVLLIALP
Ga0209068_105999482	3300027894	Watersheds	MMRQSLQQVWPERGHGGLGPAAIGGIVPLKSGVTTIGMRPAPSYGGRAMGVLIWRQRAPRDTFRQRVAGWRARNWRRAVLAWFVLSLIVMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTVAGVPVLL
Ga0209067_102311782	3300027898	Watersheds	MRQSLQQVRPERGRGGLGPAAIGGIAPLKAGVTTIGTRPVPSYGGRTMGALIWRQRAPQATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0209415_101578551	3300027905	Peatlands Soil	MMRQSLQQVWPERTSGGLGPAAIGGIAPLKPGATTIGTRPAPSYGGRTMEVIWRRRAPQATFRQHVAGWRARNWRRAVLAWFVLSLIIMAVAAEPKTDFPKAQASSVPAVRMFLRVAGGLTAAGVPVLLIALP
Ga0209698_107557271	3300027911	Watersheds	MRQSLQQVWPERGRGGLGPSAIGGIAPLRAGAATIGTRPVPSYGGRVMGALSWRQRAPRATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPKTDFPKAQARSVPAVQMVLRVAGGLTAAGVPLLLIALP
Ga0265353_10362091	3300028015	Soil	MRQSLQQVWPERGHRGLGPAAIGGIVPLKSGVTTIGTRPAPSYGGRAIGDLTWRQRAPQTTFRQRVAGWRARNWRRAVLAWFVLSLIIMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTVAGVPVLLIALP
Ga0308309_101443283	3300028906	Soil	MRQALQQVWPERGRGGLGPAAIGGIAPLKAGVTTLGSRPAPSYGGRIWRQRVPQTTFRERVAGWRARNWRRAVLAWFVLSLIILAVAAEPRTDFPKAQVRSVPAVRMFLRVAGGLTAAGVPILLIALP
Ga0310037_100514882	3300030494	Peatlands Soil	MMRQSLQQVWPERVRGGLSHAAIGGIAPLKPGATTIGTRPAPSYGGRTMEVIWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVAAEPRTDFPKAQAGSVPAARMFFRVAGGLTAAGVPMLLIALP
Ga0310037_100956572	3300030494	Peatlands Soil	MRQSLQQVWPERGRGGLGPSAIGGIAPLRAGAATIGTRPVPSYGGRVMGALSWRQRAPRATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVAMVLRVAGGLTAAGIPVLLIALP
Ga0310037_101602712	3300030494	Peatlands Soil	MRQSLQQVWPERGRGGLGPAAIGGIAPLKAGVTAIGTRPAPSYGGRAMGVLVWRQRAPQATFRQRVASWRARNWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPLLLIALP
Ga0310037_101963931	3300030494	Peatlands Soil	MSQSLQQVRPERGRGGLGPAAIGGIAPLKAGVTTIGTRPVPSYGGRTMGALIWRQRAPQATFRQRVAGWRVRNWRRAVLTWFVLSLIIMAISAEPRTDFPKALARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0316363_102068261	3300030659	Peatlands Soil	MRQSLQQVWPVRGRGGLGPPAIGGIAPLKAGAATIGTRPVPSYGGRVMGALIWRQRAPQATFRQRVVGWRARNWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0310039_102350652	3300030706	Peatlands Soil	MRQSLQQVWPERGRGGLGTPAVGGIAPLRAGAATIGTRPVPSYGGRVMGALSWRQRAPRATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPKTDFPKAQARSVPAVGMVLRVAGGLTAAGIPVLLIALP
Ga0310039_102615401	3300030706	Peatlands Soil	MMRQSLQQVWPERVRGGLSHAAIGGIAPLKPGATTIGTRPAPSYGGRTMEVIWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIIMAAAAEPRTDFPKAQARSVPAVRMFLRVAGGLTAAGVPVLLIALP
Ga0318528_100735062	3300031561	Soil	MMRQSLQQVWPQGGRGGLSPAASGGIASLQPGVTTIGARPAPPYGGRARGVVVWRQRAPQVPFRQRVAGWRARNWRRAVLAWFVLSLIIMAVAAEPGTDFPKAQASSVPAVRMILRVTGGLTAAGVPLLLIALP
Ga0310686_1036933003	3300031708	Soil	MMRQSLQQVWPERGHGGLGPAAIGRIAPLKSGVTTIGTRPAPSYGGRALGVLSWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGVTAAGVPVLLIALP
Ga0318502_102268391	3300031747	Soil	MHQSLQQVWPGRGRAGLGRAAIGGIAPLRSGVTTVGTRPVLSWGERVVGAIVWRRRTSQVSFRQRVAGWRARNWRRAVLMWFVLSLIFMAIAAEPATDFPRAQAHSVPAVQTVLRVAGGLTAAGIPVLLIALP
Ga0306923_114813091	3300031910	Soil	MHQSLQQVWPGRGRAGLGRAAIGGIAPLRSGVTTVGTRPVLSWGERVVGAIVWRRRTSQVSFRQRVAGWRARNWRRAVLMWFVLSLIFMAIAAEPATDFPRAQAHSVPAVQTVLRVA
Ga0307479_113381231	3300031962	Hardwood Forest Soil	MMRQVLQQERGRGGMGSAAIGGMVPLQPGAATIGTRAVPAYRGRPAWRQRAPRASFRQRLADWRARNWRRAVLAWFVLSLIIMAVAAEPKTDFPKAQAGSVPAVRMVLRVVGGLAVAGVPVVLIALP
Ga0318524_100028263	3300032067	Soil	MIRQSFQQVWPERGLRGLSLSPIRGIAPVKAGATAIGTRPAPFYRGRTMQVVVWRQRAPRVPFRQRVAGWRARNWRRAVLAWFVLSLIVMAASAEPASYFPKAQARSVPAVRMILHVAGGLTAAGVPMVLIALP
Ga0311301_100539834	3300032160	Peatlands Soil	MMHQSLQQVRPERARGGLSPAAIGVIAPLKPGATTIGTRPASPNGERAMGVLSWRQRAPQATFRQRVVGWRARNWRRVVLAWFVLSLIIMAMAAEPRTDFPKAQARSVPAVRMFLRVAGGVTAAGVPVLLIALP
Ga0311301_100988514	3300032160	Peatlands Soil	MMRQSPQQVRPARARGELSPAAIGGIAPLKPGATTIGTCPAPSYGGRTMGALIWRQRAPQATLRERVVGWRARNWRRAVLAWFVLSLIIMAVAAEPRTDFPKAQAGSVPAARMFFRVAGGLTAAGVPMLLIALP
Ga0311301_102422534	3300032160	Peatlands Soil	MTRQSLQQVWPERARGGLAPAAIGVAAPVKPGVTTIGARPAPSYGGRAMGVLIWRQRAPRATFRQRVVGWRARNWRRAVLAWFVLSLIIMAVSAEPRTDFPKAQARPVPAVRMVLRVAGGLTAVGVPMLLIVLP
Ga0311301_111072521	3300032160	Peatlands Soil	MSQSLQQVRPERGRGGLGPAAIGGIASLKAGVTTIGTRPVPSYGGRTMGVLIWRQRAPQATFRQRVAGWRARNWRRAVLTWFVLSLIIMAVSAEPKTDFPKAQARSVPAVRTVLRVAGGLTAAGVPVLLIALP
Ga0311301_112839962	3300032160	Peatlands Soil	MMRQSLQQVWPERARGGLGPAAIGAIAPLKPGVTTIGTRPVPSYGGRAMGGLVWRQRAPQVAFRQRVAGWRARNWRRAVLAWFVLSLIIMAVAGEPRTDFPKAQARSVPAVRMVLRVAGGLTAVGVPILLIALP
Ga0311301_114401202	3300032160	Peatlands Soil	MRQSLQQVRPERARDGLGPAAIGRIAPLKSGVTILGTRPAPSYGGRAMAVLIWRQRAPQATFRQRVAGWRARNWRRAVLAWFVLSLIIMAVAAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPLLLIALP
Ga0335079_113094252	3300032783	Soil	MVQQVLPESGRRGLGRATFGTIAPLKSGATTVGARSAIAHGGRAMEAIVWRERAPRASFQERLAGRRQSLAGWRARNWRRLVLAWFVLSLIVMAVGAEPKTDFPKAQAGSAPAVRMVMRVAGGLTVAGVPVLLIVLP
Ga0335080_106891351	3300032828	Soil	MMRQSLQQVWPQGGRGGLSPAASGGIASLQPGVTTIGARPAPPYGGRAMGVVVWRQRAPQVPFRRRVAGWRARNWRRAVLAWFVLSLIIMAVAAEPKTDFPKAQASSVPAVRMILRVTGGLTVAGVPLLLIALP
Ga0335073_112057722	3300033134	Soil	MVQQVWQEGGRRGLGPATIGGIASLKSGATTIGARPAPSYGGRAMGVVVWRQRAPRVPFRQRVAGWRARNWRRAVLAWFVLSLIILAVAAEPKTDFPKVQARSVPAVQMVLRVAGGLTVAGVPLLLIALP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078973

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences