Metagenome / Metatranscriptome Family F078963

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078963
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	110 residues
Representative Sequence	ATTALRHAVEADPAFELALADLDAMTGTSGQRPSRRQMNWERHHIEVVRTAASGNGQRAADLLREHLAGVGCDPLAFRIVAQMRQPAGMDDDFENLAGQLPDCHPTRWPSSP
Number of Associated Samples	96
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.48 %
% of genes near scaffold ends (potentially truncated)	94.83 %
% of genes from short scaffolds (< 2000 bps)	93.10 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.759 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (36.207 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.414 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.14% β-sheet: 0.00% Coil/Unstructured: 47.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00107	ADH_zinc_N	10.34
PF00106	adh_short	7.76
PF14329	DUF4386	6.03
PF01212	Beta_elim_lyase	0.86
PF02776	TPP_enzyme_N	0.86
PF07690	MFS_1	0.86
PF14333	DUF4389	0.86
PF13401	AAA_22	0.86
PF00115	COX1	0.86
PF00528	BPD_transp_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	1.72
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.86
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	0.86
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	0.86
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.86
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.86
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.86
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.86
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.86
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.86
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.86
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.86
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.86
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.86
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.86
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
All Organisms	root	All Organisms	42.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
cellular organisms	root	All Organisms → cellular organisms	42.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.38 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.59 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.86 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.86 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.86 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	17.24 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.86 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.86 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.86 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.86 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.24 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.72 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.86 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.86 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.86 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.24 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.72 %
Calidithermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus	0.86 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.86 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.86 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.24 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.72 %
Actinospica durhamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	0.86 %
Calidithermus terrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus terrae	0.86 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.86 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig52123	Not Available	836	Open in IMG/M
3300001356\|JGI12269J14319_10160875	Not Available	943	Open in IMG/M
3300001384\|JGI20190J14840_1005307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1397	Open in IMG/M
3300001403\|JGI20205J14842_1020442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300001418\|JGI20188J14859_1020018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300004082\|Ga0062384_100531423	Not Available	785	Open in IMG/M
3300005537\|Ga0070730_10242847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1191	Open in IMG/M
3300005541\|Ga0070733_10853167	Not Available	612	Open in IMG/M
3300005542\|Ga0070732_10819730	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300006052\|Ga0075029_100420457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Calidithermus → Calidithermus terrae	872	Open in IMG/M
3300006059\|Ga0075017_100431976	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300006176\|Ga0070765_100611705	Not Available	1027	Open in IMG/M
3300009521\|Ga0116222_1207840	Not Available	843	Open in IMG/M
3300009522\|Ga0116218_1343047	Not Available	667	Open in IMG/M
3300009552\|Ga0116138_1086275	All Organisms → cellular organisms → Bacteria → Terrabacteria group	875	Open in IMG/M
3300009623\|Ga0116133_1209822	Not Available	526	Open in IMG/M
3300009624\|Ga0116105_1029649	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1184	Open in IMG/M
3300009628\|Ga0116125_1148303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300009698\|Ga0116216_10347680	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300009700\|Ga0116217_10627453	Not Available	668	Open in IMG/M
3300009762\|Ga0116130_1086067	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	986	Open in IMG/M
3300010341\|Ga0074045_10117760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1825	Open in IMG/M
3300010341\|Ga0074045_10580976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300014159\|Ga0181530_10610105	Not Available	533	Open in IMG/M
3300014162\|Ga0181538_10476287	Not Available	659	Open in IMG/M
3300014162\|Ga0181538_10740010	Not Available	508	Open in IMG/M
3300014165\|Ga0181523_10407012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300014165\|Ga0181523_10540513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300014839\|Ga0182027_12085036	Not Available	541	Open in IMG/M
3300017822\|Ga0187802_10427652	Not Available	526	Open in IMG/M
3300017926\|Ga0187807_1066828	Not Available	1118	Open in IMG/M
3300017926\|Ga0187807_1103229	Not Available	897	Open in IMG/M
3300017928\|Ga0187806_1097059	Not Available	938	Open in IMG/M
3300017932\|Ga0187814_10113867	Not Available	1001	Open in IMG/M
3300017932\|Ga0187814_10282772	Not Available	633	Open in IMG/M
3300017933\|Ga0187801_10305674	Not Available	648	Open in IMG/M
3300017935\|Ga0187848_10143953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1054	Open in IMG/M
3300017942\|Ga0187808_10223528	Not Available	839	Open in IMG/M
3300017946\|Ga0187879_10823574	Not Available	519	Open in IMG/M
3300017959\|Ga0187779_11347036	Not Available	507	Open in IMG/M
3300017995\|Ga0187816_10173285	Not Available	936	Open in IMG/M
3300018007\|Ga0187805_10110847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1243	Open in IMG/M
3300018008\|Ga0187888_1102946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1214	Open in IMG/M
3300018020\|Ga0187861_10183392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300018033\|Ga0187867_10577954	Not Available	616	Open in IMG/M
3300018037\|Ga0187883_10268079	Not Available	873	Open in IMG/M
3300018037\|Ga0187883_10468642	Not Available	648	Open in IMG/M
3300018042\|Ga0187871_10084650	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300018042\|Ga0187871_10333982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	838	Open in IMG/M
3300018043\|Ga0187887_10699684	Not Available	599	Open in IMG/M
3300018090\|Ga0187770_10408213	Not Available	1068	Open in IMG/M
3300019082\|Ga0187852_1416959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300020582\|Ga0210395_10221135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1421	Open in IMG/M
3300020582\|Ga0210395_11010784	Not Available	616	Open in IMG/M
3300020582\|Ga0210395_11374634	Not Available	515	Open in IMG/M
3300021372\|Ga0213877_10364285	Not Available	501	Open in IMG/M
3300021401\|Ga0210393_10322401	Not Available	1256	Open in IMG/M
3300021404\|Ga0210389_10862849	Not Available	706	Open in IMG/M
3300021406\|Ga0210386_10245419	All Organisms → cellular organisms → Bacteria → Proteobacteria	1526	Open in IMG/M
3300021407\|Ga0210383_10308655	Not Available	1361	Open in IMG/M
3300021474\|Ga0210390_11253228	Not Available	597	Open in IMG/M
3300021477\|Ga0210398_10907168	Not Available	706	Open in IMG/M
3300021477\|Ga0210398_11365649	Not Available	555	Open in IMG/M
3300021479\|Ga0210410_10573839	Not Available	1003	Open in IMG/M
3300023068\|Ga0224554_1068214	Not Available	877	Open in IMG/M
3300025464\|Ga0208076_1031301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300025604\|Ga0207930_1133969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300025627\|Ga0208220_1008472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3572	Open in IMG/M
3300025633\|Ga0208480_1159524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300025634\|Ga0208589_1043835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1161	Open in IMG/M
3300025915\|Ga0207693_10641890	Not Available	825	Open in IMG/M
3300026481\|Ga0257155_1075711	Not Available	544	Open in IMG/M
3300027168\|Ga0208239_1028738	Not Available	546	Open in IMG/M
3300027867\|Ga0209167_10739170	Not Available	537	Open in IMG/M
3300027905\|Ga0209415_10025986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8716	Open in IMG/M
3300027905\|Ga0209415_10155084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2289	Open in IMG/M
3300028789\|Ga0302232_10118856	Not Available	1344	Open in IMG/M
3300028808\|Ga0302228_10216289	All Organisms → cellular organisms → Bacteria → Terrabacteria group	870	Open in IMG/M
3300029883\|Ga0311327_10405772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300029913\|Ga0311362_10467660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1191	Open in IMG/M
3300029917\|Ga0311326_10317044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300029988\|Ga0302190_10133980	Not Available	1072	Open in IMG/M
3300029999\|Ga0311339_10147169	All Organisms → cellular organisms → Bacteria	2775	Open in IMG/M
3300030007\|Ga0311338_10335820	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300030007\|Ga0311338_10451732	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300030007\|Ga0311338_11209155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	716	Open in IMG/M
3300030013\|Ga0302178_10003728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11306	Open in IMG/M
3300030056\|Ga0302181_10094386	Not Available	1491	Open in IMG/M
3300030494\|Ga0310037_10436540	Not Available	538	Open in IMG/M
3300030509\|Ga0302183_10390568	Not Available	533	Open in IMG/M
3300030524\|Ga0311357_10055673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4032	Open in IMG/M
3300030580\|Ga0311355_10357458	Not Available	1444	Open in IMG/M
3300030617\|Ga0311356_10489932	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300030617\|Ga0311356_11797939	Not Available	546	Open in IMG/M
3300030693\|Ga0302313_10268493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300031040\|Ga0265754_1008769	Not Available	765	Open in IMG/M
3300031090\|Ga0265760_10048277	Not Available	1279	Open in IMG/M
3300031090\|Ga0265760_10187258	Not Available	694	Open in IMG/M
3300031236\|Ga0302324_100416371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1997	Open in IMG/M
3300031525\|Ga0302326_13211394	Not Available	551	Open in IMG/M
3300031708\|Ga0310686_103281309	Not Available	892	Open in IMG/M
3300031708\|Ga0310686_106094167	Not Available	897	Open in IMG/M
3300031708\|Ga0310686_115974779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300031708\|Ga0310686_118803029	Not Available	824	Open in IMG/M
3300031718\|Ga0307474_10901884	Not Available	700	Open in IMG/M
3300031823\|Ga0307478_10854106	Not Available	762	Open in IMG/M
3300032515\|Ga0348332_13674442	Not Available	865	Open in IMG/M
3300032892\|Ga0335081_10187999	Not Available	2880	Open in IMG/M
3300032892\|Ga0335081_10906064	Not Available	1039	Open in IMG/M
3300032892\|Ga0335081_11758253	Not Available	673	Open in IMG/M
3300032954\|Ga0335083_10244106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1611	Open in IMG/M
3300032955\|Ga0335076_10368227	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300033134\|Ga0335073_12039457	Not Available	523	Open in IMG/M
3300033158\|Ga0335077_11830255	Not Available	569	Open in IMG/M
3300033402\|Ga0326728_10412076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1147	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.83%
Aquatic	Environmental → Aquatic	30.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Freshwater	Environmental → Aquatic → Freshwater	28.45%
Peat	Environmental → Terrestrial → Peat	18.97%
Sediment	Environmental → Aquatic → Sediment	1.72%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.07%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	18.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.34%
Loam	Environmental → Terrestrial → Soil → Loam	2.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	18.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.34%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.45%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.86%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.86%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.86%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.86%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001384	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012	Environmental	Open in IMG/M
3300001403	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012	Environmental	Open in IMG/M
3300001418	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00036880	2124908043	Soil	RHAAGFYRQAQRALDAPQATTALRLAVNADPAFGLAIADLDAITGTAGEGPSRQQMNWERHHIEVVRTAATGNTERAADLLREHLATVGCDPLAVRIAADLGHRSDHHDDFQDLVGHLPSCHPTRWLSSQ
JGI12269J14319_101608752	3300001356	Peatlands Soil	LRHAVEADPAFELALADLDAMTGTSGQRRGRGQMNWERHHIEVVRTAASGNARRAADLLREHLAGVGCDPLAFRIVAYMRQPTGMDDDFEDLAAQLPDCHPTRWPSSA*
JGI20190J14840_10053072	3300001384	Arctic Peat Soil	ATALRLAVHADPAFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVTTAATGNARRAADLLREHLASVGCDPLAFRVTAMLRQPAGKNDDFETLASQLPGCHTTPWPCSP*
JGI20205J14842_10204422	3300001403	Arctic Peat Soil	AFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVTTAATGNARRAADLLREHLASVGCDPLAFRVTAMLRQPAGKNDDFETLASQLPGCHTTPWPCSP*
JGI20188J14859_10200181	3300001418	Arctic Peat Soil	AAAATALRLAVHADPAFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVTTAATGNARRAADLLREHLASVGCDPLAFRVTAMLRQPAGKNDDFETLASQLPGCHTTPWPCSP*
Ga0062384_1005314232	3300004082	Bog Forest Soil	ALRHAVEADPAFELALADLDAITGTSGQRHSRGQMNWERHHIEVVRTAASGNGKRAADLLREHLAAVGCDPLAFRIVAQMRQPAGMDDDFDNLAGQLPDCHPTRWPSPP*
Ga0070730_102428472	3300005537	Surface Soil	DPAFELALADLDAMTGTSGQRHGRGQMNWERHHIEVVRTAASGNVKRAADLLREHLAGVGCDPLAFRIVARMRQPMGMDDDFEGLAGQLPDCHPARWPSSP*
Ga0070733_108531672	3300005541	Surface Soil	QAQRAIDRRRAITALRHAVDADPAFELALTDLDAMTGTSGQRHGRGQMTWERHHIEIVRTAASGHAKRAADLLREHLAGVGCDPLALQIVAQMRQPAETDDDFENLAAQLPDCHRTRWPSSP*
Ga0070732_108197301	3300005542	Surface Soil	WYRQAQRATDRHRATTALRLAVEADPAFELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAASGNGKRAADLLREHLAGVGCDPLAVRIVAQMRQPAGMDDSFEDFAGQLPDCHPARWPSSP*
Ga0075029_1004204572	3300006052	Watersheds	YRHAQRAIDRRRATTALRLAVEADPAFELALADLDAITGTSGQRHSRGQMNWERHHIEVVRTAASGNGKRAADLLREHLAGVGCDPLAFRIVAQMQQPAGMDDDFENLARQLPDCHPTRWPSSP*
Ga0075017_1004319762	3300006059	Watersheds	ARYRQAQRAADSRLAATALRLAVHADPAFGLAVADLDAITGTASQGPGHQQMNWERHHIEVVRAAATGNARRAADLLREHLASIGCDPLAFRIAAMLRQPAGKNDDFENLASHLPGCHATPWPCSP*
Ga0070765_1006117055	3300006176	Soil	LADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAASGNGQRAADLLREHLAGVGCDPLAFRIVAQMRQPAGMDDDFENLAGQLPDCHPTRWPSSP*
Ga0116222_12078402	3300009521	Peatlands Soil	RAAAWYRQAQRAIDRRRAATALRHAVEADPAFELALADLDAMTGTSGQRRGRGQMNWERHHIEVVRTAASGNARRAADLLREHLAGVGCDPLAFRIVAYMRQPTGMDDDFEDLAAQLPDCHPTRWPSSA*
Ga0116218_13430472	3300009522	Peatlands Soil	AATWYRQAQRAIDHRRATTALRLAVEADPAFELARADLDAMTGTSGQRHSRGQMNWERHHIEIVRTAASGNARRAADLLREHLAGVGCDPLAFRIVAQTRQTAGMDDDFEDLAAQLPDCHPTRWPGSP*
Ga0116138_10862751	3300009552	Peatland	FGLAVADLNAITGTASQAPSHQQMNWERHHIEVVRAAATGNARRAADLLREHLASIGCDPLAFRIAAMLRQPAGKNDDFENLASQLPGCHTTPWPCPL*
Ga0116133_12098222	3300009623	Peatland	LRLAVHADPAFGLAVADLDAITGTASQGPSHQQMTWERHHIEVVRAAATGNARRAADLLREHLASVGCDPLAFRITALLRRPAGQNDDVDNLTSQLPGCHATRWPCSP*
Ga0116105_10296492	3300009624	Peatland	AVDADPAFGLAVADLNAITGTASQAPSHRQMNWERHHIEVVRAAATGNARRAADLLREHLASIGCDPLAFRIAAMLRQPAGKNDDFENLASQLPGCHTTPWPCPL*
Ga0116125_11483031	3300009628	Peatland	QAQRAADSRLATTALRLAVDADPAFGLAVADLNAITGTASQAPSHRQMNWERHHIEVVRAAATGNARRAADLLREHLASIGCDPLAFRIAAMLRQPAGKNDDFENLASHLPGCHATPWPCSP*
Ga0116216_103476802	3300009698	Peatlands Soil	QAQRAADSRLATTALRLAVHADPAFGLAVADLDAITATASQIPSHRQMNWERHHIEVVRAAATGNARRAADLLREHHASVGCDPLAFRIAAMLRQPGGKNDDFENLASQLPGCHTTPWPCPP*
Ga0116217_106274531	3300009700	Peatlands Soil	ELARADLDAMTGTSGQRHSRGQMTWERHHIEIVRTAASGNARRAADLLREHLAGVGCDPLAFRIVAQTRQTAGMDDDFEDLAAQLPDCHPTRWPGSP*
Ga0116130_10860672	3300009762	Peatland	AVADLNAITGTASQAPSHQQMNWERHHIEVVRAAATGNARRAADLLREHLASIGCDPLAFRIAAMLRQPAGKNDDFENLASQLPGCHTTAWPCPL*
Ga0074045_101177601	3300010341	Bog Forest Soil	SRLATTALRLAVHADPAFGLAVADLDAITGTASKGPSHQQMNWERHHIEMVHAAATGNARRAADLLREHLASIGCDPLAFRIAALLRQPTGKNDDLENLASHLPGCHATPWPCPP*
Ga0074045_105809761	3300010341	Bog Forest Soil	VRYRQAQRAANSHQAATALRLAVHADPDFGLAVADLGAITGTPARTSRRQQMTWERHHIEVVRTAAAGHAGRAADLLREHLASVGCDPLAVRISAQLWRPSGKDDEFEDLAS*
Ga0181530_106101051	3300014159	Bog	RHQAATALHLAVEADPAFELALADLDAITGTSAERPGHRQVNWERHHNEVVRTAASGDSKRALDLLREHLAGVGCDPLAFRIVAQLRQPEGTDDDFENLASQLPGCHPSRWPSSP*
Ga0181538_104762871	3300014162	Bog	EADPAFDLALADLDALTRTSAHSDSRRQMNWERHHIEVVRTASMGKGKRAADLLREHLAGVGCDPLASRIVAHLRPPGRADDDFESLAGQLPGCHASRWPSSS*
Ga0181538_107400101	3300014162	Bog	AFELALADLDAITGTSAERPGNRQVNWERHHNEVVRNAASGDSKRALDLLREHLAGVGCDPLAFRIVAQLRQPEGTDDDFENLASQLPGCHPSRWPSSP*
Ga0181523_104070121	3300014165	Bog	VHADPAFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVAAAAAGNAGRAADLLREHLASVGCDPLAFRITALLRRPAGQNDDVDNLTSQLPGCHATRWPCSP*
Ga0181523_105405131	3300014165	Bog	KRRAAARYRQAQRAADSRLATAALRLAVHADPAFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVHAAATGNTRRAADLLREHLASVGCDPLAFRIAALLRQPTGKNDDFENLASHLPGCHATPWPCPP*
Ga0182027_120850361	3300014839	Fen	ARYRQAQRAADRHQAATALHLAVEADPAFELALTDLEAITGTSAERPGHRQMNWERHHNEVVRTAASGDSKRSVDLLREHLAGVGCDPLAFRIVAQLRQPEGTDDDFENLASQLPGCHPSRWPSSS*
Ga0187802_104276521	3300017822	Freshwater Sediment	LRLAVEADPAFELALADLDAITGTSGQRHSRGQMNWERHHIEIVRTVACGNGKRAADLLREHLAGVGCDPLAFRIVAQMRQPAGMDDDFENLAGQLPDCHPTRWPSSP
Ga0187807_10668282	3300017926	Freshwater Sediment	AVEADPAFELALADLDAITGTSGQRPSRGQMNWERHHIEIVRTAASGNGKRAADLLREHLAAVGCDPLAFRIVAQTRQPAGRDDDFENLAGQLPHCHPTRWPGSP
Ga0187807_11032291	3300017926	Freshwater Sediment	ALRHAVEADPAFELALADLDAMTGTSGQRLGRGQMNWERHHIEVVRTAASGNARRAADLLREHFAGVGCDPLAFRIVAYMRQSTGMDDDFEDLAAQLPDCHPTRWPSSA
Ga0187806_10970591	3300017928	Freshwater Sediment	DPAFELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAASGNGKRAADLLREHLAAVGCDPLAFRIVAQMRQPAGRDDDFENLAGQLPDCHPTRWPSSP
Ga0187814_101138671	3300017932	Freshwater Sediment	HRRAAAALRHAVEADPAFELALADLDAMTGTSGQHHSRGQMNWERHHIEVVRTAASGNGRRAADLLREHLAGVGCDPLAFRIVAQALQPVGMDDDFEDLAAQLPDCHPTRWPSSPSPPWPTPCS
Ga0187814_102827722	3300017932	Freshwater Sediment	AFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVRAAATGNARRAADLLREHLASVGCDPLAFRIAAMLRQPAGKNDDFENLASHLPGCHATPWPCSP
Ga0187801_103056741	3300017933	Freshwater Sediment	LRHAVEADPAFELALADLDAMTGTSGQRHSRRQMNWERHHIEVVRTAASGNARRAADLLREHLAGVGCDPLAFRTVAYMRQPTGMDDDFEDLAAQLPDCHPTRWPSSA
Ga0187848_101439532	3300017935	Peatland	VVTANQRAAECYRQAQRAVDLRQAMTALRGAISADPAFGLALADLEAITGTAARDPGHRQMNWERHHIEVLRAAASGDAVRAADLLSEHLASVGCDPLAVRIAAQLRQPTGADEPVTSAGQFPSCHPIPWPCSP
Ga0187808_102235282	3300017942	Freshwater Sediment	DPAFELALADLDAITGTSGQRPSRGQMNWERHHIEIVRTAASGNGKRAADLLREHLAAVGCDPLAFRIVAQTRQPAGRDDDFENLAGQLPHCHPTRWPGSP
Ga0187879_108235741	3300017946	Peatland	PAFELALADLDAMTGTSGQRPSRGQMNWERHHIEVVGTAASGNAKRAAGLLREHLAAVGCDPLAFRIVAQMRQPAGRDDDFENLAGQLPDCHPARWPGSP
Ga0187779_113470361	3300017959	Tropical Peatland	TAALRLALEADPAFELALADLDAMTGTSGRRHSRGQMNWERHHIEVVRTAASGNGRRAADLLREHLAGVGCDPLAFRIVAQALQPAGMDDGFEDLAAQLPDCHPARWPGSP
Ga0187816_101732853	3300017995	Freshwater Sediment	ALRHAVEADPAFELALADLDAMTGTSGQRHSRRQMNWERHHIEVVRTAASGNGRRAADLLREHLAGVGCDPLAFRIVAQALQPVGMDDDFEDLAAQLPDCHPTRWPSSP
Ga0187805_101108471	3300018007	Freshwater Sediment	TTALRLAVHDDPAFGLAVADLNAITATASQIPTHRQMNWERHHIEVVRAAATGNARRAADLLREHLASVGCDPLAFRIAAMLRQPAGKNDDFENLASHLPGCHATPWPCSP
Ga0187888_11029461	3300018008	Peatland	VVTANQRAAECYRQARRTVDLRQAMTALRGAISADPAFGLALADLEAITGTAARDPGHRQMNWERHHIEVLRAAASGDAVRAADLLSEHLASVGCDPLAVRIAAQLRQPTGADEPVTSAGQFPSCHPIPWPCSP
Ga0187884_102778072	3300018009	Peatland	VVTANRRAAACYRQAQRAVDLRGAISALRRAVSADPAFGLALADLEAITGTAARDPGHRQMNWERHHIEVLRAAASGDAVRAADLLSEHLASVGCDPLAVRIAAQLRQPTGADEPVTSAGQFPSCH
Ga0187861_101833921	3300018020	Peatland	AQRAVDLRQAMTALRGAISADPAFGLALADLEAITGTAARDPGHRQMNWERHHIEVLRAAASGDAVRAADLLSEHLASVGCDPLAVRIAAQLRQPTGADEPVTSAGQFPSCHPIPWPCSP
Ga0187867_105779541	3300018033	Peatland	AITGTSAERPGHRQVNWERHHNEVVRTAASGDSKRALDLLREHLAGVGCDPLAFRIVAQLRQSEGTDDDFENLASQLPGCHPSRWPSSP
Ga0187883_102680791	3300018037	Peatland	TALRLAVHADPAFGLAVADLDAITGTASQIPSHQQMNWERHHIEVVAAAATGNARRAADLLREHLASVGCDPLAFRIAAMLRQAAGKNDDFEDLSSQLPGCHTTPWPCLP
Ga0187883_104686421	3300018037	Peatland	ADPVFELALADLDAITGTSARRPSHQQMTWERHHNEVVRTAASGDSKRAVDLLREHLAGVGCDPLAFRIVAQLRQPEGTDDDFENLASQLPGCHPSRWPSSP
Ga0187871_100846503	3300018042	Peatland	WYRQAQRAIDRRRATTALRHAVEADPAFELALADLDAITGTSGQRHSRGQMNWERHHIEVVRTAAAGDGKRAADLLREHLAAVGCDPLAFRIVAQTRQAAGMDDDFENLAGQLPDCHPTRWPSSP
Ga0187871_103339822	3300018042	Peatland	LADLDAITGTSAERPGHRQMNWERHHNEVVRTAASGDSKRAVDLLREHLAGVGCDPLAFRIVAQLRQPEGTDDDFENLASQLPGCHPSRWPSSS
Ga0187887_106996842	3300018043	Peatland	VEADPAFELALADLDAITGTSGQRHSRGQMNWERHHIEVVRTAAAGDGKRAADLLREHLAAVGCDPLAFRIVAQTRQAAGMDDDFENLAGQLPDCHPTRWPSSP
Ga0187770_104082132	3300018090	Tropical Peatland	EADPAFELALADLDAMTGTSGRRHSRGQMNWERHHIEIVRTAASGNARRAADLLREHLAGVGCDPLAFRIVAQLRQPAGMDDEFEDLAAQLPDCHPARWPGSP
Ga0187852_14169592	3300019082	Peatland	GAISADPAFGLALADLEAITGTAARDPGHRQMNWERHHIEVLRAAASGDAVRAADLLSEHLASVGCDPLAVRIAAQLRQPTGADEPVTSAGQFPSCHPIPWPCSP
Ga0210395_102211351	3300020582	Soil	HAVEADPAFELALADLDAITGTSGHRRSRGQMNWERHHIEVVRTAVSGNGKRAADLLREHLAAVGCDPLAFRIVAQMRQPAGMDDDFENLAGQLPDCHQTPWPCPP
Ga0210395_110107841	3300020582	Soil	PAFELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHGKRAADLLREHLAAVGCDPLAFRIVAQLRQPAGLDEDFEDLAGQLPACHPTRWPGSA
Ga0210395_113746342	3300020582	Soil	ALRHAVEADPAFELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAASGNSQRAADLLREHLAGVGCDPLAFRIVAQIRQPAGMDDDFENLAGQLPDCHPARWPSSP
Ga0213877_103642852	3300021372	Bulk Soil	DPAFELALADLDAMTGTSGQRHSRGQMNWERHHIEIVRTAASGNAKRATDLLREHLAGVGCDPLAFRIVAQALQPAGMDDGFEDLARQLPDCHPTRWPGSP
Ga0210393_103224014	3300021401	Soil	AFELALADLDAITGTSGQHHSRGQMNWERHHIEVVRTAASGNGQRAADLLREHLAGVGCDPLAFRIVAQMRQPAGMDDDFENLAGQLPDCHPTRWPSSP
Ga0210389_108628492	3300021404	Soil	AAWYRQAQRAIDRHRATTALRHAVEADPAFELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAASGNGQRAADLLREHLAGVGCDPLAFRIVAQIRQPAGMDDDFENLAGQLPDCHPTRWPSSP
Ga0210386_102454195	3300021406	Soil	YRQAQRAIDRRRATTALRLAVEADPAFELARADLDAITGTSGQRHSRRQMNWERHHIEIVRTAAAGNGKRAADLLREHLAAVGCDPLAFRIVTQTRQPAGTDDDFENLARQLPDCHPTRWPSSP
Ga0210383_103086552	3300021407	Soil	ADLDAMTGTSGQRHSRGQMNWERHHIEIVRTAAAGNAERATDLLREHLAAVGCDPLGYRIVAQMRQLAGIDDGFENLASQLPDCHPTRWPGSP
Ga0210390_112532282	3300021474	Soil	VEADPAFELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHGKRAADLLREHLAAVGCDPLAFRIVAQLRQPAGMDEDFEDLAGQLPACHPTRWPGSA
Ga0210398_109071682	3300021477	Soil	MTGTSGQRHSRGQMNWERHHIEVVRTAAAGHGKRAADLLREHLAAVGCDPLAFRIVAQLRQPAGMDEDFEDLAGQLPACHPTRWPGSA
Ga0210398_113656491	3300021477	Soil	ATTALRHAVEADPAFELALADLDAMTGTSGQRPSRRQMNWERHHIEVVRTAASGNGQRAADLLREHLAGVGCDPLAFRIVAQMRQPAGMDDDFENLAGQLPDCHPTRWPSSP
Ga0210410_105738391	3300021479	Soil	AVEADPAFELALADLDAITGTSGQRHSRRQMNWERHHIEVVRTAASGNGKRAADLLREHLAAVGCDPLASRIVAQALQPAGMDDDFEDLAVQLPDCHPTRWPSSP
Ga0224554_10682143	3300023068	Soil	RQAQRAVDRHQAATALHLAVEADPAFELALADLDAITGTSAERPGHRQMNWERHHNEVVRTAASGDSKRAVDLLREHLAGVGCDPLAFRIVAQLRQSEGTDDDFENLASQLPGCHPSPWPSCS
Ga0208076_10313011	3300025464	Arctic Peat Soil	ADPAFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVATAATGNARRAADLLREHLASVGCDPLAFRITAMLRQPAGKNDDFENLASQLPGCHTTPWPCSP
Ga0207930_11339691	3300025604	Arctic Peat Soil	LRRAMTALRRAVSADPAFGLALADLGAITGTAARGPSHRQMNWERHHIEVVRAAASGNAVRAADLLSEHLASVGCDPLAFRIALQLRQPIGPDEFVKLAGQLPSCHPIPWPCSPRPP
Ga0208220_10084725	3300025627	Arctic Peat Soil	LRLAVHADPAFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVTTAATGNARRAADLLREHLASVGCDPLAFRVTAMLRQPAGKNDDFETLASQLPGCHTTPWPCSP
Ga0208480_11595241	3300025633	Arctic Peat Soil	RAVDLPRAITALRRAVSADPAFGLALADLAAITGTAARSPGQRQMNWERHHIEVVRAAASGNAVRAADLLSEHLASVGCDPLAARIAVQLRQPIGMDEFVNLAGQLPSCHPVQWPRSP
Ga0208589_10438353	3300025634	Arctic Peat Soil	RRRAATALRHAVEADPAFELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHGRRATGLLREHLAAVGCDPLAFRIVAQMRQPAGTDDDFENLAGQLPDCHPTRWPGSP
Ga0207693_106418901	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	QAQRAIGRRRATTALRLAVEADPAFELALADLDAITGTSGQRHSHGQMNWERHHIEVVRTAASGNGKRAAGLLREHLADVGCDPLAFRIVAQMQQSIGTGDDLEDLAGQLSGCHPTRWPSSP
Ga0257155_10757111	3300026481	Soil	RRATTALRLAVEADPAFELALADLDAITGTSGQRHSRGQMNWERHHIEVVRTAASGNGKRAADLLREHLAGVGCDPLAYRIVAQALQPAGIDDDFENLAAQLPDCHPARWPSSP
Ga0208239_10287381	3300027168	Forest Soil	AAWYRHAQRAVTGPEATTALRLAVEADPAFELALADLDSITGSSGQRHSRGQMNWERHHIEVVRTAASGNGQRAADLLREHLAAVGCDPLAFRIVAQLRQPEGMDEDFENLAGRLPHCHPTRWPSSP
Ga0209167_107391702	3300027867	Surface Soil	PAFELALTDLDAMTGTSGQRHGRGQMTWERHHIEIVRTAASGHAKRAADLLREHLAGVGCDPLALQIVAQMRQPAETDDDFENLAAQLPDCHRTRWPSSP
Ga0209415_100259866	3300027905	Peatlands Soil	VRYREAQRAVDRSRATEALRLAVDADPAFELALADLDAITGTSAQRPGHQQMTWERHHKEVVRTAASGDSKRAVDLLREHLAGVGCDPLAFRIVAQLRQPEESDDDFENLASQLPGCHPSRWPSSP
Ga0209415_101550841	3300027905	Peatlands Soil	AAATALRLAVHADPAFGLAVADLDAITATASQIPSHRQMNWERHHIEVVRAAAAGNARRAADLLREHLASIGCDPLAFRITAMLRQPAGKNDDLENLASQLPGCHTTPWPCSP
Ga0302232_101188561	3300028789	Palsa	AFELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHFKRAADLLREHLAAVGCDPLAFRIVAQLRQPAGMDEDFEDLAGQLPACHPTRWPNSP
Ga0302228_102162891	3300028808	Palsa	RAAAWYRQAQRAIDRRRAATALRHAVEADPAFELALADLDAIAGTSGQRPSLGQMNWERHHIEVVRTAASGNGKRATDLLREHLAAVGCDPLAFRIVAQMRQPAGTDDDFENLAGQLPDCHPTRWPSSP
Ga0311327_104057722	3300029883	Bog	DSRLATAALRLAVHADPAFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVHAAATGNARRAADLLREHLASVGCDPLAFRIAAMLRQPTGKNDDFENVASHLPGCHATPWPCPP
Ga0311362_104676602	3300029913	Bog	LAVADLDAITGTASQGPSHQQMNWERHHIEVVHAAATGNARRAADLLREHLASVGCDPLAFRIAAMLRQPTGKNDDFENVASHLPGCHATPWPCPP
Ga0311326_103170441	3300029917	Bog	YRQAQRAADSRLATAALRLAVHADPAFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVHAAATGNARRAADLLREHLASVGCDPLAFRIAAMLRQPTGKNDDFENVASHLPGCHATPWPCPP
Ga0302190_101339803	3300029988	Bog	QAQRAVDRHQAATALHLAVEADPAFELALADLDAITGTSAERPGHRQMNWERHHNEVVRTAASGDSKRAVDLLREHLAGVGCDPLAFRIVAQLRQSEGTDDDFENLASQLPGCHPSPWPSCS
Ga0311339_101471692	3300029999	Palsa	MTGTSGQRHSRGQMNWERHHIEVVRTAAAGHFKRAADLLREHLAAVGCDPLAFRIVAQLRQPAGMDEDFEDLAGQLPACHPTRWPNSP
Ga0311338_103358201	3300030007	Palsa	ELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHFKRAADLLREHLAAVGCDPLAFRIVAQLRQPAGMDEDFEDLAGQLPACHPTRWPNSP
Ga0311338_104517321	3300030007	Palsa	ALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHGKRAADLLREHLAGVGCDPLAFRIVAQLRQRAGMDEDFEDLAGQLPACHPTRWPSSP
Ga0311338_112091552	3300030007	Palsa	IDRPEATAALRLAVEVDPAFELALADLDAITGSSGQRHGRGKMNWERHHIEVVRTAASGNCKRAADLLREHLATIGCDPLAFRIVAQMRQLEGMDDDFENLAGRLPRCHPTRWPSSP
Ga0302178_100037281	3300030013	Palsa	QVAADSAAAATALRLAVHADPAFGLAVADLDAITGTASQGPGHQQMNWERHHIEVVRAAATGNARRAADLLREHLASVGCDPLAFRITAMLRPPAGKNDDFENLASHLPGCHATPWPCSP
Ga0302181_100943861	3300030056	Palsa	ADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHFKRAADLLREHLAAVGCDPLAFRIVAQLRQPAGMDEDFEDLAGQLPACHPTRWPNSP
Ga0310037_104365401	3300030494	Peatlands Soil	AIIGTSGQRHSRGQMNWERHHIEVVRTAASGNAKRAADLLREHLAGVGCDPLAFRIVAYMRQSMGMDDDFEDLAGQLPDCHPTSWPSSP
Ga0302183_103905681	3300030509	Palsa	LADLDAIAGTSGQRPSLGQMNWERHHIEVVRTAASGNGKRATDLLREHLAAVGCDPLAYRIVAQTRQPAGMDDDFDNLAGQLPDCHPTRWSSPP
Ga0311357_100556735	3300030524	Palsa	ALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHFKRAADLLREHLAAVGCDPLAFRIVAQLRQPAGMDEDFEDLAGQLPACHPTRWPNSP
Ga0311355_103574582	3300030580	Palsa	ATALRHAVEADPAFELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHFKRAADLLREHLAAVGCDPLAFRIVAQLRQPAGMDEDFEDLAGQLPACHPTRWPNSP
Ga0311356_104899322	3300030617	Palsa	DLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHGKRAVDLLREHLAAVGCDPLAFRIVAQLRQPAGLDEDFEDLAGQLPACHPTRWPSSA
Ga0311356_117979391	3300030617	Palsa	LRLAVNADPAFGLAIADLGAVTATASKDPSRPQMSWERHHIEVVRTAATGKAQRAADLLREHLATVGCDPLAVRIAAQLRPPDGQDDDFEDLVRRLPGCHATLWPSSA
Ga0302313_102684931	3300030693	Palsa	AAARYRQAQRAADSRLATAALRLAVHADPAFGLAVADLDAITGTASQGPSHQQMNWERHHIEVVHAAATGNARRAADLLREHLASVGCDPLAFRIAAMLRQPTGKNDDFENVASHLPGCHATPWPCPP
Ga0265754_10087692	3300031040	Soil	DAMTGTSGQPHGRRQVNWERHHIEIVRTAASGHGKRAADLLREHLAAVGCDPLAFRIVAQMRQPAGMDDDFENLAGQLPDCHPTRWPSSP
Ga0265760_100482774	3300031090	Soil	AFELALADLDAITGTSDQHHSRGQMNWERHHIEVVRTAASGNGKRAADLLREHLAGVGCDPLAFRIVAQLRQPAGMDDDFENLAGQLLDCHPTRWPSSP
Ga0265760_101872582	3300031090	Soil	LATTALRLAVHADPAFGLAVADLDAITGTASQGRGHQQMNWERHHIEVVHAAATGNATRAADLLREHLASIGCDPLAFRIAAMLRQPAGKNDDFENLASHLPGCHATPWPCSP
Ga0302324_1004163712	3300031236	Palsa	EATAALRLAVEVDPAFELALADLDAITGSSGQRHGRGKMNWERHHIEVVRTAASGNCKRAADLLREHLATIGCDPLAFRIVAQMRQLEGMDDDFENLAGRLPRCHPTRWPSSP
Ga0302326_132113942	3300031525	Palsa	RQAQRAIDRRRAATALRHAVEADPAFELALADLDAMTGTSGQRHSRGQMNWERHHIEVVRTAAAGHGKRAVDLLREHLAAVGCDPLAFRIVAQLRQPAGLDEDFEDLAGQLPACHPTRWPSSA
Ga0310686_1032813092	3300031708	Soil	RHAVEADPAFELSLADLDAMTGTSGQRRGRGQMNWERHHIEVVRTAASGNARRAADLLREHLAGVGCDPLAFRIVAYMRQPTGMDDDFEDLAAQLPDCHPTRWPSSA
Ga0310686_1060941671	3300031708	Soil	AATWYRQAQRAIDRRRATTALRLAVEADPAFELARADLDAITGTSGQRHSRRQMNWERHHIEIVRTAAAGNGQRAADLLREHLAAVGCDPLAFRIVTQTRQPAGTDDDFENLAGQLPACHPTRWPSSP
Ga0310686_1159747791	3300031708	Soil	PRPRPSRRARIPDRARTVSHAQAVDLRGATTALRRAVNADPAFGLALADLGAITVTAARGPSHRQMNWERHHIEVVRAAVSGNAVRAADLLSEHLASVGCDPLAFRIAVQLRQPIGTDEFVNLAGQLPSCHPIPWPCSP
Ga0310686_1188030291	3300031708	Soil	AVEADPAFELALADLDAITGTSGQRHSRGQMNWERHHIEVVRAAASGNGKRAADLLREHLAGVGCDPLAFRIVAQMLQLAGLDDDFENLAGQLPDCHPTRWPSPP
Ga0307474_109018842	3300031718	Hardwood Forest Soil	IDRCRAATALRHAVEADPAFELALADLDAITGTSGQRHSRGQMNWERHHIEVVRTAASGNGKRAADLLREHLAAVGCDPLASRIVAQALQPVGMDDDFEDLAVQLPDCHPTRWPSSP
Ga0307478_108541061	3300031823	Hardwood Forest Soil	LDALTGTSGQRHSRGQMNWERHHIEIVRTAAAGNAKRATDLLREHLAAVGCDPLACRIVAQMRQLAGIDDGFKNLASQLPDCHPTRWPSSP
Ga0348332_136744423	3300032515	Plant Litter	YRHAQRATDRHRATTALRLAVEADPAFELALADLDAITGTSGQRHSRGQMNWERHHIEVVRTAAAGHGKRAADLLREHLAGVGCDPLAFRIVAQMRQPAEMDDDFENLAGQLPDCHPTRWPSSP
Ga0335081_101879991	3300032892	Soil	RQAQRATDRRRAATALRHAVDADPAFELALADLDAMTGTSGQRPSLGQMNWERHHIEIIRTAASGNAKRAADLLREHLAAVGCDPLAFRIVAQMRQPAGMDDDFENLAGQLPGCHPTRWPSSP
Ga0335081_109060642	3300032892	Soil	AFGLAVADLDAITGTASHGPSHQQMTWERHHIEVVRAAAAGNASRAADLLREHLASVGCDPLAFRIAAMLGQPAGKSDDFENLASHLPGCHATPWPGSP
Ga0335081_117582531	3300032892	Soil	LRLAVEADPAFGLALADLDAMTGTSGQRRSRGQMNWERHHIEVVRTAASGNGERAAGLLREHLAGVGCDPLAFRIVAQARQLAGMDDGFEDLAAQLPDCHPARWPGSPSPPRPTPSA
Ga0335083_102441061	3300032954	Soil	ARDTDADPAFGLAVADLDAITGTASQGPSHQQMNWERHHIEAVRAAAAGNARRAADLLREHLASVGCDPLAFRIAAMLRQPAGKNDDFENLASHLPGCHATPWPGPP
Ga0335076_103682272	3300032955	Soil	GGDGASVNHAERGAAAAARGAAGRLHLADPAFELALADLDAMTGTSGQRHSRGQMNWERHHIEIVGTAASGNGRRAAGLLREHLAAVGCDPLAFRIVAQMRQPAGMDDDFEDLAGQLPDCHPTRWPGSP
Ga0335073_120394571	3300033134	Soil	AADSRLASTALRLAIHDDPAFGLAVADLDAITGTASHGRSHQQMAWERHHVEVVRAAAVGNASRAADLLREHLASVGCDPLAFRIAAMLGQPAGKSDDFENLASHLPGCHATLWPGSP
Ga0335077_118302551	3300033158	Soil	NHAERGAAAAARGAAGRLHLADPAFELALADLAAMTGTSGQRHSRGQMNWERHHIEIVRTAASGNARRAADLLREHLAGVGCDPLAFRIVAQTRQTAGADDDFEDLAAQLPDCHPTRWPGSP
Ga0326728_104120762	3300033402	Peat Soil	MPVCAAEADPAFELALSDLDATTGTSGQRHSRGQMNWERHHVEVLRTAASGNLERATDLLRDHLDSVGCDPLLLHIVADLRQAFGKDDNLEDFVGRLPDCHPVAWQYPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078963

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences