Metagenome / Metatranscriptome Family F078961

Basic Information
Family ID	F078961
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	41 residues
Representative Sequence	PAEQTDLGELTWELPLEGGQAATIRHRFTVEHPAQVTVTGL
Number of Associated Samples	101
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.86 %
% of genes near scaffold ends (potentially truncated)	99.14 %
% of genes from short scaffolds (< 2000 bps)	85.34 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (75.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.276 % of family members)
Environment Ontology (ENVO)	Unclassified (20.690 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.379 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.35% β-sheet: 39.13% Coil/Unstructured: 56.52%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01740	STAS	12.93
PF00892	EamA	5.17
PF04672	Methyltransf_19	5.17
PF02311	AraC_binding	4.31
PF07228	SpoIIE	3.45
PF02233	PNTB	3.45
PF03711	OKR_DC_1_C	3.45
PF00005	ABC_tran	2.59
PF12833	HTH_18	2.59
PF13466	STAS_2	1.72
PF14024	DUF4240	1.72
PF00296	Bac_luciferase	1.72
PF08818	DUF1801	1.72
PF13620	CarboxypepD_reg	1.72
PF01042	Ribonuc_L-PSP	1.72
PF13556	HTH_30	1.72
PF00561	Abhydrolase_1	0.86
PF13193	AMP-binding_C	0.86
PF04028	DUF374	0.86
PF12697	Abhydrolase_6	0.86
PF02012	BNR	0.86
PF12762	DDE_Tnp_IS1595	0.86
PF13424	TPR_12	0.86
PF01053	Cys_Met_Meta_PP	0.86
PF12849	PBP_like_2	0.86
PF01904	DUF72	0.86
PF03372	Exo_endo_phos	0.86
PF13598	DUF4139	0.86
PF04264	YceI	0.86
PF14518	Haem_oxygenas_2	0.86
PF03060	NMO	0.86
PF09234	DUF1963	0.86
PF13336	AcetylCoA_hyd_C	0.86
PF08281	Sigma70_r4_2	0.86
PF12802	MarR_2	0.86
PF14833	NAD_binding_11	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	4.31
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	3.45
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.72
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.72
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.72
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.72
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.72
COG2121	Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamily	Function unknown [S]	0.86
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.86
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.86
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.86
COG3878	Uncharacterized conserved protein YwqG, DUF1963 family	Function unknown [S]	0.86
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.86
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.86
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.86
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.86
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.86
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.86
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.86
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.86
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.86
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.45 %
Unclassified	root	N/A	25.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.41 %
Unclassified	root	N/A	25.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.76 %
Unclassified	root	N/A	25.00 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.59 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	12.07 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	4.31 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.72 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	0.86 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.86 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.45 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.59 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Baekduiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae	0.86 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.86 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.86 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.86 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.59 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Baekduia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia	0.86 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.86 %
Labedaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea	0.86 %
Sciscionella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella	0.86 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.86 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.86 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.86 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.59 %
Pseudonocardia spinosispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia spinosispora	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
unclassified Sciscionella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella → unclassified Sciscionella	0.86 %
Nonomuraea fuscirosea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea fuscirosea	0.86 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.86 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	0.86 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	0.86 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.86 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.86 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.59 %
Pseudonocardia spinosispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia spinosispora	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Sciscionella sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella → unclassified Sciscionella → Sciscionella sp.	0.86 %
Nonomuraea fuscirosea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea fuscirosea	0.86 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.86 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	0.86 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	0.86 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.86 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.86 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10466194	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300003505\|JGIcombinedJ51221_10135814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	990	Open in IMG/M
3300005332\|Ga0066388_107749969	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005341\|Ga0070691_10787667	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005435\|Ga0070714_100044116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3774	Open in IMG/M
3300005435\|Ga0070714_100690496	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300005436\|Ga0070713_102275783	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005445\|Ga0070708_100426648	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300005518\|Ga0070699_100060072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3293	Open in IMG/M
3300005518\|Ga0070699_100504277	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300005537\|Ga0070730_10854607	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005541\|Ga0070733_10233216	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300005542\|Ga0070732_10756880	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005577\|Ga0068857_100135715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2221	Open in IMG/M
3300005602\|Ga0070762_10267700	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300006028\|Ga0070717_10683621	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300006028\|Ga0070717_10700230	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300006028\|Ga0070717_11624797	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300006059\|Ga0075017_101328433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	565	Open in IMG/M
3300006176\|Ga0070765_100734247	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300006871\|Ga0075434_100976829	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300009089\|Ga0099828_10072647	All Organisms → cellular organisms → Bacteria	2917	Open in IMG/M
3300009090\|Ga0099827_10213386	Not Available	1610	Open in IMG/M
3300009093\|Ga0105240_10690677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1115	Open in IMG/M
3300009143\|Ga0099792_10365381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	874	Open in IMG/M
3300009628\|Ga0116125_1259679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	505	Open in IMG/M
3300009700\|Ga0116217_10860578	Not Available	557	Open in IMG/M
3300009824\|Ga0116219_10368507	Not Available	804	Open in IMG/M
3300010329\|Ga0134111_10250101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300010359\|Ga0126376_11572372	Not Available	689	Open in IMG/M
3300010396\|Ga0134126_10307515	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300010398\|Ga0126383_10218097	Not Available	1846	Open in IMG/M
3300010876\|Ga0126361_10388662	Not Available	546	Open in IMG/M
3300010876\|Ga0126361_10762975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	614	Open in IMG/M
3300011271\|Ga0137393_10122149	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300012205\|Ga0137362_11015647	Not Available	706	Open in IMG/M
3300012351\|Ga0137386_10468304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	908	Open in IMG/M
3300012357\|Ga0137384_11539443	Not Available	514	Open in IMG/M
3300012359\|Ga0137385_11203645	Not Available	619	Open in IMG/M
3300012359\|Ga0137385_11336130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300012924\|Ga0137413_11081667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia spinosispora	633	Open in IMG/M
3300012971\|Ga0126369_11489637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300016319\|Ga0182033_10785722	Not Available	838	Open in IMG/M
3300016371\|Ga0182034_10036180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3138	Open in IMG/M
3300016422\|Ga0182039_11404989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	634	Open in IMG/M
3300017821\|Ga0187812_1135659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300017932\|Ga0187814_10062809	Not Available	1363	Open in IMG/M
3300017946\|Ga0187879_10334850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300017948\|Ga0187847_10599594	Not Available	615	Open in IMG/M
3300017959\|Ga0187779_10755692	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300017974\|Ga0187777_10373677	Not Available	983	Open in IMG/M
3300017974\|Ga0187777_11152942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	565	Open in IMG/M
3300018006\|Ga0187804_10070701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1396	Open in IMG/M
3300018060\|Ga0187765_10878043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300020069\|Ga0197907_10540609	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300020581\|Ga0210399_11103620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300020583\|Ga0210401_10091950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2851	Open in IMG/M
3300021374\|Ga0213881_10007994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4333	Open in IMG/M
3300021374\|Ga0213881_10051093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1750	Open in IMG/M
3300021402\|Ga0210385_10432346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	992	Open in IMG/M
3300021402\|Ga0210385_10761904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	742	Open in IMG/M
3300021407\|Ga0210383_10386465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1207	Open in IMG/M
3300021433\|Ga0210391_10086539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2473	Open in IMG/M
3300021474\|Ga0210390_10358475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1234	Open in IMG/M
3300021478\|Ga0210402_11953286	Not Available	513	Open in IMG/M
3300021560\|Ga0126371_11448084	Not Available	817	Open in IMG/M
3300022467\|Ga0224712_10054411	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300025910\|Ga0207684_10227895	Not Available	1608	Open in IMG/M
3300025921\|Ga0207652_11591672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300025922\|Ga0207646_10133806	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2232	Open in IMG/M
3300025929\|Ga0207664_10481441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300025929\|Ga0207664_12017343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	500	Open in IMG/M
3300027158\|Ga0208725_1032507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	818	Open in IMG/M
3300027568\|Ga0208042_1150813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300027641\|Ga0208827_1086421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300027748\|Ga0209689_1392405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia spinosispora	531	Open in IMG/M
3300027765\|Ga0209073_10472501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300027775\|Ga0209177_10511319	Not Available	502	Open in IMG/M
3300027884\|Ga0209275_10305916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	883	Open in IMG/M
3300027889\|Ga0209380_10143506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1393	Open in IMG/M
3300027905\|Ga0209415_10101149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3162	Open in IMG/M
3300028877\|Ga0302235_10456240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	544	Open in IMG/M
3300030503\|Ga0311370_12336476	Not Available	520	Open in IMG/M
3300030707\|Ga0310038_10451533	Not Available	550	Open in IMG/M
3300030739\|Ga0302311_10487150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	850	Open in IMG/M
3300030739\|Ga0302311_10599912	Not Available	741	Open in IMG/M
3300030743\|Ga0265461_13686644	Not Available	520	Open in IMG/M
3300031234\|Ga0302325_10167301	Not Available	3881	Open in IMG/M
3300031671\|Ga0307372_10174421	Not Available	1449	Open in IMG/M
3300031680\|Ga0318574_10899575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300031681\|Ga0318572_10038719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	2520	Open in IMG/M
3300031713\|Ga0318496_10004709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea fuscirosea	6115	Open in IMG/M
3300031744\|Ga0306918_11298347	All Organisms → cellular organisms → Bacteria → Terrabacteria group	560	Open in IMG/M
3300031748\|Ga0318492_10506069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	641	Open in IMG/M
3300031754\|Ga0307475_10805831	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300031778\|Ga0318498_10180577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300031779\|Ga0318566_10502028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella → unclassified Sciscionella → Sciscionella sp.	594	Open in IMG/M
3300031793\|Ga0318548_10142126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1168	Open in IMG/M
3300031795\|Ga0318557_10381585	Not Available	648	Open in IMG/M
3300031819\|Ga0318568_10853278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	564	Open in IMG/M
3300031819\|Ga0318568_11035188	Not Available	507	Open in IMG/M
3300031819\|Ga0318568_11037580	Not Available	506	Open in IMG/M
3300031819\|Ga0318568_11038252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300031832\|Ga0318499_10357601	All Organisms → cellular organisms → Bacteria → Terrabacteria group	561	Open in IMG/M
3300031835\|Ga0318517_10372937	Not Available	645	Open in IMG/M
3300032044\|Ga0318558_10024976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2466	Open in IMG/M
3300032064\|Ga0318510_10444298	All Organisms → cellular organisms → Bacteria → Terrabacteria group	556	Open in IMG/M
3300032066\|Ga0318514_10398398	Not Available	730	Open in IMG/M
3300032160\|Ga0311301_10923728	Not Available	1170	Open in IMG/M
3300032261\|Ga0306920_100017247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9966	Open in IMG/M
3300032261\|Ga0306920_100069835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5145	Open in IMG/M
3300032805\|Ga0335078_12639530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300032895\|Ga0335074_11114754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	678	Open in IMG/M
3300032898\|Ga0335072_10442724	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300033290\|Ga0318519_10927308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	539	Open in IMG/M
3300033544\|Ga0316215_1008361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1017	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.55%
Host-Associated	Host-Associated	3.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.52%
Aquatic	Environmental → Aquatic	6.03%
Plants	Host-Associated → Plants	3.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.48%
Freshwater	Environmental → Aquatic → Freshwater	5.17%
Peat	Environmental → Terrestrial → Peat	4.31%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.72%
Sediment	Environmental → Aquatic → Sediment	0.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.76%
Loam	Environmental → Terrestrial → Soil → Loam	19.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.31%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Clay	Environmental → Terrestrial → Soil → Clay	0.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.17%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.45%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.72%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.72%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033544	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078961

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_104661942	3300001661	Forest Soil	RPRETTPAPEGTDDLGELTWTLILPAGESSAVRHRFTVEHPAQVTVVGL*
JGIcombinedJ51221_101358141	3300003505	Forest Soil	GDVKVRGRETSPPPAETDDLGELTWNLVLAPRASATIRHRFVVEHPVHVTVTGL*
Ga0066388_1077499692	3300005332	Tropical Forest Soil	PATQTDLGELTWELPLDGGQAATVRYRFTVEHPAQVTVIGL*
Ga0070691_107876671	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	PAPDSTDDLGELTWTLILPPGESAAVRHRFTVEHPAQVTVVGL*
Ga0070714_1000441164	3300005435	Agricultural Soil	TPAPDSTDDLGELTWTLILPPGESAAVRHRFTVEHPAQVTVVGL*
Ga0070714_1006904963	3300005435	Agricultural Soil	APAEQTDLGELSWEVRLDAGKSAEVRYRFTVEHPAQVTVAGL*
Ga0070713_1022757832	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AGLDDLGEITWDLTLDGGKSALIKHRFTVEHPANVQVAGL*
Ga0070708_1004266481	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SPSPAEQTDLGELTWDLTLEAGQSATIRHRFTVEHPAQVSIVGL*
Ga0070699_1000600724	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	SPNPAEQTDLGELTWELSLDGGQAATIRHRFTVEHPAQVTIAGL*
Ga0070699_1005042771	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	NPAEQTDLGELTWELSLDGGQAATIRHRFTVEHPAQVIIAGL*
Ga0070730_108546071	3300005537	Surface Soil	AETDDLGELTWNLTLDPGGSSTITHRFTVEHPPQVTVTGL*
Ga0070733_102332162	3300005541	Surface Soil	DPAAQNDLGELTWELPLEGGQAATVRYRFTVEHPAQVAVTGL*
Ga0070732_107568801	3300005542	Surface Soil	AQNDLGELTWELPLEGGQAATVRYRFTVEHPAQVAVTGL*
Ga0068857_1001357154	3300005577	Corn Rhizosphere	GELTWELALDGGQEAAVRYRFTVEHPAQVTVTGL*
Ga0070762_102677003	3300005602	Soil	PPAETDDLGELTWNLVLTPRESATIRHRFTVEHPAQVAVTGL*
Ga0070717_106836211	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TDDLGELTWTLILPAGESSAIRHRFTVEHPAQVTVSGL*
Ga0070717_107002301	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AEQTDLGELTWELSLDGGQAATIRHRFTVEHPAQVTIAGL*
Ga0070717_116247972	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DLGELTWELALDGGQEAAVRYRFTVEHPAQVTVTGL*
Ga0075017_1013284331	3300006059	Watersheds	LRETSPDPAERNDLGELTWELSLDGGQTATIHHRFTVEHPAQVTVAGL*
Ga0070765_1007342471	3300006176	Soil	APDSSDDLGELSWTLTLPPGESSAIRHRFTVEHPAQATVTGL*
Ga0075434_1009768291	3300006871	Populus Rhizosphere	TPAPDSTDDLGELTWTLILPPGESAAVSHRFTVEHPAQVTVVGL*
Ga0099828_100726471	3300009089	Vadose Zone Soil	LGELTWELSLEGGQTAAIRYRFTVEHPAQVTIAGL*
Ga0099827_102133862	3300009090	Vadose Zone Soil	WEASPSPAGHSDLGELTWDLALDGGQAATIRYRFTVEHPAQVTVAGL*
Ga0105240_106906773	3300009093	Corn Rhizosphere	VRSRETTPAPDSTDDLGELTWTLILPPGESAAVRHRFTVEHPAQVTVVGL*
Ga0099792_103653811	3300009143	Vadose Zone Soil	LGELTWELSLDGGQEATVRYRFSVEHPAQVTVTGI*
Ga0116125_12596791	3300009628	Peatland	LGELTWNLALAPRESATIKHRFTVEHPAQTAVTGL*
Ga0116217_108605782	3300009700	Peatlands Soil	DLGELSWELSLDSGQSATIRYRFTVEHPAQVTITGL*
Ga0116219_103685072	3300009824	Peatlands Soil	SPDPAAHSDLGELTWQLELDGGQAQTIRYRFTVEHPAQVTITGL*
Ga0134111_102501011	3300010329	Grasslands Soil	GELTWELSLDGGQEATVRYRFTVEHPAQVTVTGI*
Ga0126376_115723721	3300010359	Tropical Forest Soil	PDPAGQDDLGELTWELSLDGGQTTKIRYRFTVEHPAQVTVTGL*
Ga0134126_103075151	3300010396	Terrestrial Soil	EQNDLGELTWDLSLEGGQAATIRHRFTVEHPAQVTIAGL*
Ga0126383_102180971	3300010398	Tropical Forest Soil	RLRETSPNPAEQNDLGELTWELSLDGGQAAKIRYRFTVEHPAQVTVAGL*
Ga0126361_103886621	3300010876	Boreal Forest Soil	PAEQNDLGELIWDLSLDGGQAATIRYRFTVEHPAQVTVVGL*
Ga0126361_107629751	3300010876	Boreal Forest Soil	EQNDLGELTWDLSLEGGQAATIRHRFTVEHPAQVTITGL*
Ga0137393_101221494	3300011271	Vadose Zone Soil	GELTWELSLEGGHTTTIRYRFTVEHPAQVTIAGL*
Ga0137362_110156471	3300012205	Vadose Zone Soil	EQTDLGELTWELTLEAGQSATIRHRFTVEHPAQVSIVGL*
Ga0137386_104683043	3300012351	Vadose Zone Soil	APATQTDLGELTWELSLEGGREATIRYRFTVEHPAQVTVTGL*
Ga0137384_115394431	3300012357	Vadose Zone Soil	VRLRETSPDPAGHDDLGELTWELSLAGGQTATIRHRFTVEHPAQVTVAGL*
Ga0137385_112036451	3300012359	Vadose Zone Soil	LGELTWDLSLEAGQSATIRHRFTIEHSAQVAVAGL*
Ga0137385_113361301	3300012359	Vadose Zone Soil	PAPAEQTDLGELVWELPLDAGKSATIRYRFTVEHPAQVTVTGL*
Ga0137413_110816671	3300012924	Vadose Zone Soil	TDLGELTWELALDGGQEATVRYRFTVEHPAQVTVSGL*
Ga0126369_114896371	3300012971	Tropical Forest Soil	PAEQTDLGELTWELSLDGGQAATLRHRFTVEHPAQVTIAGL*
Ga0182033_107857221	3300016319	Soil	PNPASQTDLGELTWDLSLEPGQAATIRHRFTVEHPAQVTITGL
Ga0182034_100361801	3300016371	Soil	PASQTDLGELTWDLSLEPGQAATIRHRFTVEHPAQVTITGL
Ga0182039_114049891	3300016422	Soil	QSDLGELTWNLTLDPGRAATIRYRFTVEHPAQLTVAGL
Ga0187812_11356591	3300017821	Freshwater Sediment	DPAGHDDLGELTWELSLEGGQAAAIRYRFTVEHPAQVTVTGL
Ga0187814_100628091	3300017932	Freshwater Sediment	EQTDLGELTWELSLEGGQAATIRHRFTVEHPAQVTITGL
Ga0187879_103348501	3300017946	Peatland	QSDLGELTWELKLDGGQAASVRYRFTVEHPAQVVVTGL
Ga0187847_105995941	3300017948	Peatland	RESSPPPAETDDLGELTWNLVLAPRESAAIRHRFTVEHPAQTTVTGL
Ga0187779_107556922	3300017959	Tropical Peatland	QDDLGELTWELSLAGGQTATVRYRFTVEHPAQVIIAGL
Ga0187777_103736771	3300017974	Tropical Peatland	DLGELTWVLPLDSGRSAAIRFRFTVEHPAQVTVAGL
Ga0187777_111529421	3300017974	Tropical Peatland	AEQTDLGELTWELVLDAGQTATIRHRFTVEHPAQVTVAGL
Ga0187804_100707011	3300018006	Freshwater Sediment	SDLGELTWELPLEGGQAATVRYRFTVEHPAQVGVTGL
Ga0187765_108780431	3300018060	Tropical Peatland	EQTDLGELIWELPLDGGQTATIRHRFTVEHPAQVTVAGL
Ga0197907_105406091	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	SREASPAPAGLDDLGEITWDLTLDGGKSAVIKHRFTVEHPANVQVSGL
Ga0210399_111036201	3300020581	Soil	DLGELTWELSLDAGQEATVRYRFTVEHPAQVTVTGI
Ga0210401_100919504	3300020583	Soil	RETTPAPASTDDLGELTWNLILPAGESSAIRHRFTVEHPAQATVAGL
Ga0213881_100079941	3300021374	Exposed Rock	PAEQTDLGELTWELPLEGGQAATIRHRFTVEHPAQVTVTGL
Ga0213881_100510931	3300021374	Exposed Rock	LGELTWELPLEGGQAATIRHRFTVEHPAQVTVTGL
Ga0210385_104323463	3300021402	Soil	PTDGDVKVRGRETSPPPAETDDLGELTWNLVLAPRASATIRHRFVVEHPVHVTVTGL
Ga0210385_107619041	3300021402	Soil	LRETSPAPAEQDDLGELTWNLTLDRGQTATVRYRFTVEHPAQLTVVGL
Ga0210383_103864651	3300021407	Soil	DLGELTWNLVLTPRASATIRHRFTVEHPAQVTVTGL
Ga0210391_100865394	3300021433	Soil	ETDDLGELTWNLVLTPRESATIRHRFTVEHPAQITVTGL
Ga0210390_103584753	3300021474	Soil	ETSPPPAATVDLGELTWNLVLTPRQSATIRHRFTVEHPAQVAVTGL
Ga0210402_119532861	3300021478	Soil	EQNDLGELTWELSLEGGQAATIRHRFTIEHPAQVTIAGL
Ga0126371_114480842	3300021560	Tropical Forest Soil	APAEQTDLGELTWEVRLDGGKAAEVRYRFTVEHPAQVTVAGL
Ga0224712_100544112	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	REASPAPAGLDDLGEITWDLTLDGGKSAVIKHRFTVEHPANVQVSGL
Ga0207684_102278951	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PAEQTDLGELTWELTLEAGQSATIRHRFTVEHPAQVSITGL
Ga0207652_115916722	3300025921	Corn Rhizosphere	DLGELSWELRLDAGKSAAVRYRFTVEHPAQVTVTGL
Ga0207646_101338063	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AGQTDLGELTWDLALDGGQSATIRYRFTVEHPAQVTVAGL
Ga0207664_104814411	3300025929	Agricultural Soil	LGELTWELALDGGQEAAVRYRFTVEHPAQVTVTGL
Ga0207664_120173431	3300025929	Agricultural Soil	LGELTWELPLDAGKAATIRYRFTVEHPAQVTVTGL
Ga0208725_10325071	3300027158	Forest Soil	PPAETDDLGEITWNLVLTPRAAATIRHRFTVEHPAQVSVTGL
Ga0208042_11508131	3300027568	Peatlands Soil	DDLGELTWELPLEGGQAATIRYRFTVEHPAQVTVTGL
Ga0208827_10864211	3300027641	Peatlands Soil	PAGHDDLGELTWELPLEGGQAATIRYRFTVEHPAQVTVTGL
Ga0209689_13924051	3300027748	Soil	LGELTWELSLDGGQEATVRYRFTVEHPAQVTVTGI
Ga0209073_104725012	3300027765	Agricultural Soil	EQTDLGELSWELRLDAGKSAAVRYRFTVEHPAQVTVTGL
Ga0209177_105113192	3300027775	Agricultural Soil	GDIKVRSRETTPAPDSTDDLGELTWTLILPPGESAAVRHRFTVEHPAQVTVVGL
Ga0209275_103059163	3300027884	Soil	PPAETDDLGELTWNLVLTPRESATIRHRFTVEHPAQVAVTGL
Ga0209380_101435062	3300027889	Soil	VRSRETSPNPVERNDLGELTWELSLEGGQAATIRHRFTVEHPAQVTVVGL
Ga0209415_101011495	3300027905	Peatlands Soil	LGELTWDLSLDRGQAATIRYRFTVEHPAQVSVAGL
Ga0302235_104562402	3300028877	Palsa	PPAEADDLGELTWNLVLAPRKSAVITHRFTVEHPAQVAVTGL
Ga0311370_123364762	3300030503	Palsa	PPAQTDDLGELTWNLTLGSRESATIKHRFTVEHPAQTTVTGL
Ga0310038_104515332	3300030707	Peatlands Soil	DLGELSWELSLDSGQSATIRYRFTVEHPAQVTITGL
Ga0302311_104871503	3300030739	Palsa	DLGELTWNLVLTPRESATIRHRFTVEHPAQVAVTGL
Ga0302311_105999122	3300030739	Palsa	DLGELTWNLTLGSRESATIKHRFTVEHPAQTTVTGL
Ga0265461_136866442	3300030743	Soil	IFSLIFFFLGELTWDLVLDSGKSGTIKYRFTVEHPASVTVTGL
Ga0302325_101673011	3300031234	Palsa	DLGELTWNLALAPRESAVIKHRFTVEHPAQAAVTGL
Ga0307372_101744211	3300031671	Soil	VRLREASPSPAGHTDLGELTWELALPAGQSATIRHRFTVEHPAQVSVAGL
Ga0318574_108995753	3300031680	Soil	LRETSPNPAEHDDLGELTWVLSLDSGQASTIRHRFTVEHPAQVTIAGL
Ga0318572_100387193	3300031681	Soil	RETSPNPASQTDLGELTWDLSLEPGQAATIRHRFTVEHPAQVTITGL
Ga0318496_100047091	3300031713	Soil	PNPAEHDDLGELTWVLSLDSGQASTIRHRFTVEHPAQVTIAGL
Ga0306918_112983472	3300031744	Soil	PAEHDDLGELTWVLSLDSGQASTIRHRFTVEHPAQVTIAGL
Ga0318492_105060693	3300031748	Soil	RLREASPDPAGQDDLGELTWELSLDGGQTATIRYRFTVEHPAQVTVAGL
Ga0307475_108058312	3300031754	Hardwood Forest Soil	DDLGELTWTLVLPPGESSAIFHRFTVEHPAQVTVVGL
Ga0318498_101805771	3300031778	Soil	TSPEPASQTDMGELTWDLSLEPGQAATIRHRFTVEHPAQVTIVGL
Ga0318566_105020281	3300031779	Soil	DLGELTWVLSLDSGQASTIRHRFTVEHPAQVTIAGL
Ga0318548_101421263	3300031793	Soil	TQSDLGELTWELPLDGGQAATVRYRFTVEHPAQVTVIGL
Ga0318557_103815851	3300031795	Soil	ASPDPASQTDLGELTWDLSLDAGQTATIRHRFTVEHPAQVTIIGL
Ga0318568_108532781	3300031819	Soil	LREASPDPAGQDDLGELTWELSLDGGQTATIRYRFTVEHPAQVTVAGL
Ga0318568_110351881	3300031819	Soil	LGELTWELPLDGGQAATIRHRFTVEHPAQVTVAGL
Ga0318568_110375801	3300031819	Soil	LGELTWVLSLDSGQASTIRHRFTVEHPAQVTIAGL
Ga0318568_110382522	3300031819	Soil	QTDLGELTWELSLDGGQEAAVRYRFTVEHPAQVTVTGL
Ga0318499_103576012	3300031832	Soil	ETSPNPAEHDDLGELTWVLSLDSGQASTIRHRFTVEHPAQVTIAGL
Ga0318517_103729371	3300031835	Soil	NDLGELTWELSLESGHAATIRHRFTVEHPAQVTITGL
Ga0318558_100249765	3300032044	Soil	TDLGELTWDLSLDAGQTATIRHRFTVEHPAQVTIVGL
Ga0318510_104442981	3300032064	Soil	NPAEHDDLGELTWVLSLDSGQASTIRHRFTVEHPAQVTIAGL
Ga0318514_103983981	3300032066	Soil	DLGELTWELSLDGGQEATVRYRFTVEHPAQVTVTGL
Ga0311301_109237281	3300032160	Peatlands Soil	ERNDLGELTWQLSLDGGQAATIRHRFTVEHPAQVTVAGL
Ga0306920_10001724712	3300032261	Soil	AEHDDLGELTWVLSLDSGQASTIRHRFTVEHPAQVTIAGL
Ga0306920_1000698351	3300032261	Soil	DLGELTWDLSLEPGQAATIRHRFTVEHPAQVTITGL
Ga0335078_126395301	3300032805	Soil	HTDLGELRWELTLAAGQSATIRHRFTVEHPPGVTLTGL
Ga0335074_111147542	3300032895	Soil	TTPPPDQTHDLGELIWKLALGPRASAAVTHRFTVEHPAQVTVTGL
Ga0335072_104427241	3300032898	Soil	RETTPAPVKADDLGELTWELPLDGGKSAAIRHRFTVEHPASVSVTGL
Ga0318519_109273082	3300033290	Soil	LGELTWELSLDGGQTATIRYRFTVEHPAQVTVAGL
Ga0316215_10083613	3300033544	Roots	APDSSDDLGELSWTLTLPPGESSAIRHRFTVEHPAQAAVTGL

Hidden Markov Model


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