Metagenome / Metatranscriptome Family F078900

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078900
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	95 residues
Representative Sequence	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECADESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG
Number of Associated Samples	108
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.41 %
% of genes near scaffold ends (potentially truncated)	34.48 %
% of genes from short scaffolds (< 2000 bps)	84.48 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.759 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (38.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.966 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 43.75% Coil/Unstructured: 56.25%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF12802	MarR_2	31.03
PF13412	HTH_24	10.34
PF00089	Trypsin	6.90
PF00571	CBS	4.31
PF01522	Polysacc_deac_1	0.86
PF13493	DUF4118	0.86
PF12681	Glyoxalase_2	0.86
PF03734	YkuD	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.86
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.86
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.76 %
Unclassified	root	N/A	17.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.76 %
Unclassified	root	N/A	17.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.76 %
Unclassified	root	N/A	17.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.69 %
Unclassified	root	N/A	17.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.69 %
Unclassified	root	N/A	17.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.72 %
Unclassified	root	N/A	17.24 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	19.83 %
Unclassified	root	N/A	17.24 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9.48 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	19.83 %
Unclassified	root	N/A	17.24 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	9.48 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	19.83 %
Unclassified	root	N/A	17.24 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	9.48 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	19.83 %
Unclassified	root	N/A	17.24 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	4.31 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_1368_length_1136_cov_7.102993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1168	Open in IMG/M
3300000550\|F24TB_11507417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300001686\|C688J18823_10259678	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300004114\|Ga0062593_101187166	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300004156\|Ga0062589_102485416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	536	Open in IMG/M
3300004157\|Ga0062590_101215251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	736	Open in IMG/M
3300004479\|Ga0062595_100314150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1066	Open in IMG/M
3300004643\|Ga0062591_100581012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	985	Open in IMG/M
3300005330\|Ga0070690_100442817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300005344\|Ga0070661_100450563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1024	Open in IMG/M
3300005345\|Ga0070692_10384266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	882	Open in IMG/M
3300005347\|Ga0070668_101278888	Not Available	666	Open in IMG/M
3300005355\|Ga0070671_102117386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	501	Open in IMG/M
3300005366\|Ga0070659_100213469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1591	Open in IMG/M
3300005438\|Ga0070701_10426863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	846	Open in IMG/M
3300005441\|Ga0070700_101691319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300005535\|Ga0070684_100267124	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300005547\|Ga0070693_100830270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300005549\|Ga0070704_101554790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	609	Open in IMG/M
3300005577\|Ga0068857_100888672	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300005614\|Ga0068856_100360197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1473	Open in IMG/M
3300005615\|Ga0070702_100228003	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300005618\|Ga0068864_100150620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2107	Open in IMG/M
3300005834\|Ga0068851_10207021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1097	Open in IMG/M
3300005842\|Ga0068858_101762491	Not Available	612	Open in IMG/M
3300005844\|Ga0068862_101390801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	705	Open in IMG/M
3300006058\|Ga0075432_10063115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1322	Open in IMG/M
3300006196\|Ga0075422_10115676	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300006237\|Ga0097621_100264104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1511	Open in IMG/M
3300006844\|Ga0075428_100172638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2342	Open in IMG/M
3300006881\|Ga0068865_101145624	Not Available	687	Open in IMG/M
3300009100\|Ga0075418_10086197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3339	Open in IMG/M
3300009147\|Ga0114129_11372909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	873	Open in IMG/M
3300009553\|Ga0105249_12388063	Not Available	601	Open in IMG/M
3300010036\|Ga0126305_10001466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10531	Open in IMG/M
3300010038\|Ga0126315_10058704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2111	Open in IMG/M
3300010039\|Ga0126309_11138149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300010040\|Ga0126308_10013653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4202	Open in IMG/M
3300010041\|Ga0126312_10092284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2062	Open in IMG/M
3300010041\|Ga0126312_10302881	Not Available	1128	Open in IMG/M
3300010042\|Ga0126314_10190756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1441	Open in IMG/M
3300010147\|Ga0126319_1176119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1123	Open in IMG/M
3300010147\|Ga0126319_1533468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	842	Open in IMG/M
3300010399\|Ga0134127_10770943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1008	Open in IMG/M
3300010400\|Ga0134122_11871100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300010403\|Ga0134123_11454220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300011000\|Ga0138513_100031032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300012212\|Ga0150985_107123037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300012212\|Ga0150985_114500310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1270	Open in IMG/M
3300012884\|Ga0157300_1017286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300012893\|Ga0157284_10225536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300012897\|Ga0157285_10140602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300012902\|Ga0157291_10361078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300012904\|Ga0157282_10047562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1035	Open in IMG/M
3300012914\|Ga0157297_10264565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300013297\|Ga0157378_10754996	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300013306\|Ga0163162_10749814	Not Available	1096	Open in IMG/M
3300013308\|Ga0157375_10370124	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300014325\|Ga0163163_10570936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1194	Open in IMG/M
3300014326\|Ga0157380_11380104	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300014745\|Ga0157377_10315223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1037	Open in IMG/M
3300014968\|Ga0157379_10138677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2192	Open in IMG/M
3300014969\|Ga0157376_11893746	Not Available	633	Open in IMG/M
3300015077\|Ga0173483_10004428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4688	Open in IMG/M
3300015371\|Ga0132258_10275449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4126	Open in IMG/M
3300015374\|Ga0132255_103027379	Not Available	717	Open in IMG/M
3300017792\|Ga0163161_10248152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1387	Open in IMG/M
3300018028\|Ga0184608_10043893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1736	Open in IMG/M
3300018051\|Ga0184620_10017795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1723	Open in IMG/M
3300018073\|Ga0184624_10212245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300019356\|Ga0173481_10006780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3109	Open in IMG/M
3300021510\|Ga0222621_1100280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300022694\|Ga0222623_10097341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1144	Open in IMG/M
3300023077\|Ga0247802_1034149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300025901\|Ga0207688_10167841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1304	Open in IMG/M
3300025920\|Ga0207649_10615747	Not Available	836	Open in IMG/M
3300025923\|Ga0207681_10862375	Not Available	758	Open in IMG/M
3300025927\|Ga0207687_11441709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300025942\|Ga0207689_10592273	Not Available	932	Open in IMG/M
3300025972\|Ga0207668_10749387	Not Available	862	Open in IMG/M
3300026035\|Ga0207703_11475889	Not Available	654	Open in IMG/M
3300026075\|Ga0207708_10414665	Not Available	1116	Open in IMG/M
3300026078\|Ga0207702_12313099	Not Available	525	Open in IMG/M
3300026116\|Ga0207674_11245775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300027907\|Ga0207428_10187156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1562	Open in IMG/M
3300028381\|Ga0268264_11375237	Not Available	716	Open in IMG/M
3300028592\|Ga0247822_10347050	All Organisms → cellular organisms → Bacteria → Proteobacteria	1146	Open in IMG/M
3300028719\|Ga0307301_10038623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300028744\|Ga0307318_10001910	All Organisms → cellular organisms → Bacteria	6894	Open in IMG/M
3300028754\|Ga0307297_10254536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300028811\|Ga0307292_10082236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1247	Open in IMG/M
3300028876\|Ga0307286_10009243	All Organisms → cellular organisms → Bacteria	3021	Open in IMG/M
3300028881\|Ga0307277_10098828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300028889\|Ga0247827_10527133	Not Available	744	Open in IMG/M
3300031091\|Ga0308201_10045116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1079	Open in IMG/M
3300031152\|Ga0307501_10146619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300031547\|Ga0310887_10092700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1478	Open in IMG/M
3300031548\|Ga0307408_100270230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1411	Open in IMG/M
3300031562\|Ga0310886_10155134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300031731\|Ga0307405_10158016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1602	Open in IMG/M
3300031824\|Ga0307413_10670419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	858	Open in IMG/M
3300031858\|Ga0310892_10316591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	990	Open in IMG/M
3300031858\|Ga0310892_10317052	All Organisms → cellular organisms → Bacteria → Proteobacteria	989	Open in IMG/M
3300031901\|Ga0307406_10568395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300031901\|Ga0307406_10646481	Not Available	877	Open in IMG/M
3300031901\|Ga0307406_11648733	Not Available	567	Open in IMG/M
3300031908\|Ga0310900_10566978	Not Available	893	Open in IMG/M
3300031911\|Ga0307412_10225337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1440	Open in IMG/M
3300031938\|Ga0308175_100130914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2372	Open in IMG/M
3300031943\|Ga0310885_10413582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300031995\|Ga0307409_100088401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2529	Open in IMG/M
3300032002\|Ga0307416_100047352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3402	Open in IMG/M
3300032002\|Ga0307416_100104340	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300032002\|Ga0307416_101042021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300032003\|Ga0310897_10153054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	971	Open in IMG/M
3300032013\|Ga0310906_10003495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5169	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.31%
Host-Associated	Host-Associated	45.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.28%
Plants	Host-Associated → Plants	45.69%
Aquatic	Environmental → Aquatic	6.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.38%
Sediment	Environmental → Aquatic → Sediment	4.31%
Freshwater	Environmental → Aquatic → Freshwater	1.72%
Roots	Host-Associated → Plants → Roots	1.72%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.93%
Loam	Environmental → Terrestrial → Soil → Loam	9.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	9.48%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.59%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01584490	2140918013	Soil	MPERAVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYEQSSG
F24TB_115074172	3300000550	Soil	MAMPERAARNSLLIRGVNERINGFSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSAXXXXTGIQVLMARDGYSIVEYQQSSG*
C688J18823_102596781	3300001686	Soil	LATSDRAVRNSLLIRGVNERINGLSDSWFEDEPRELLCECGDESCIDGILVSRADYEVVMGHPGRYLVTSDHGDDAGIRVLVTRDGYSIVEYP*
Ga0062593_1011871662	3300004114	Soil	MTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0062589_1024854161	3300004156	Soil	LIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0062590_1012152511	3300004157	Soil	VNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0062595_1003141502	3300004479	Soil	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0062591_1005810122	3300004643	Soil	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAS*
Ga0070690_1004428172	3300005330	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECGDESCIEAILVTRADYKVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0070661_1004505632	3300005344	Corn Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECADESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0070692_103842663	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYPPS*
Ga0070668_1012788882	3300005347	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0070671_1021173861	3300005355	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGMTLLSRDGYSIVEYRPS*
Ga0070659_1002134694	3300005366	Corn Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0070701_104268631	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECGDESCIEAILVTRADYKVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPTSV*
Ga0070700_1016913192	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	SLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTRADYDVALEHPGRYLVTSDHGDETGVTLLSRDGYSIVEYPPS*
Ga0070684_1002671241	3300005535	Corn Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECGDESCIEAILVTRADYKVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYPPS*
Ga0070693_1008302701	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPTSV*
Ga0070704_1015547901	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYPPS*
Ga0068857_1008886722	3300005577	Corn Rhizosphere	MAMPERAVRNSLLIRGVNERINGLSDSWFDEEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYQQSSG*
Ga0068856_1003601974	3300005614	Corn Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEYPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0070702_1002280033	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGMTLLSRDGYSIVEYRPS*
Ga0068864_1001506204	3300005618	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPTSV*
Ga0068851_102070213	3300005834	Corn Rhizosphere	VTTPDWGIRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGMTLLSRDGYSIVEYRPS*
Ga0068858_1017624911	3300005842	Switchgrass Rhizosphere	VTTPDWGIRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYPPS*
Ga0068862_1013908012	3300005844	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYPPS*
Ga0075432_100631151	3300006058	Populus Rhizosphere	PEANVAAPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNSDHGDETGIRVLMTRGGYSIVEYPQSSG*
Ga0075422_101156762	3300006196	Populus Rhizosphere	VAAPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNSDHGDETGIRVLMTRGGYSIVEYPQSSA*
Ga0097621_1002641044	3300006237	Miscanthus Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGMTLLSRDGYSIVEYRPSAS*
Ga0075428_1001726382	3300006844	Populus Rhizosphere	VATPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNSDHGDETGIRVLMTRGGYSIVEYPQSSG*
Ga0068865_1011456242	3300006881	Miscanthus Rhizosphere	VTTPDWGVRNSLLIRGVNERLNGLSLSWSDDEPRELLCECANESCIEAILVTRADYKVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPTSV*
Ga0075418_100861973	3300009100	Populus Rhizosphere	VAAPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNSDHDDETGIRVLMARDGYSIVEYPQSSG*
Ga0114129_113729092	3300009147	Populus Rhizosphere	VAAPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNSDHGDETGIRVLMTRGGYSIVEYPQSSG*
Ga0105249_123880632	3300009553	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRNEYSIVEYRPSAG*
Ga0126305_100014666	3300010036	Serpentine Soil	VVTTRERAARNSLLIREVNERITGLSDSWFDGEPRELLCECGDGSCIEAILVTRGDYEVALEQPGRYLVNSDHSDEPGIRVLMTRDGYSIVEYRHDSD*
Ga0126315_100587043	3300010038	Serpentine Soil	VRNSLLIRGVNERINGLSDSWFEDEPRELLCECGDDSCIDAILVSRADYEVAMEHPGHYLVNADHGDETGIRVLVTRNGYSIVEYPQSSR*
Ga0126309_111381492	3300010039	Serpentine Soil	MGFRGRRRARVTTREWAVRNSLLIREVNERIAELSESWLDGEPRELLCECGDDSCIQVILVTRADYDVARNHSGRYLIASNHGEDAGTKVRTTRDGYSVVEYAPV
Ga0126308_100136531	3300010040	Serpentine Soil	VVTTRERAARNSLLIREVNERITGLSDSWFDGEPRELLCECGDGSCIEAIRVTRGDYEVALEQPGRYLVNSDHSDEPGIRVLMTRDGYS
Ga0126312_100922842	3300010041	Serpentine Soil	LIRHPVRAKVTKPERAARNSLLIRGVNERINELSDSWSDEEPHELLCECGDEGCIEGIFVTRGDYEAALRQPGRYLVDSDHGDDPGVTVLMSRDGYSIVEYQENSTG*
Ga0126312_103028812	3300010041	Serpentine Soil	VRNSLLIREVNERIAELSESWLDGEPRELLCECGDESCIQVILVTRADYDVARNHFGRYLITSNHGEDAGTKVRTTRNGYSIVEYAPAPAT*
Ga0126314_101907563	3300010042	Serpentine Soil	ERITGLSDSWFDGEPRELLCECGDGSCIEAIRVTRGDYEVALEQPGRYLVNSDHSDEPGIRVLMTRDGYSIVEYRHDSD*
Ga0126319_11761191	3300010147	Soil	RVVFVLFPSEDTKASIRHPEANVATPERAVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDDSCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGSQVLMARDGYSIVEYQQSSG*
Ga0126319_15334683	3300010147	Soil	RVVFVLFRSKDTKASIRHPEADVATPERAVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGSQVLMARDGYSIIEYQQSSG*
Ga0134127_107709433	3300010399	Terrestrial Soil	VATPERTVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSQADYEVALGHPGHYLVNSDHSDETGIQVLMARDGYSIVQYQQSSG*
Ga0134122_118711001	3300010400	Terrestrial Soil	KASIRHPEANVATPERTVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLTARDGYLIVEYRQTSG*
Ga0134123_114542202	3300010403	Terrestrial Soil	VTTPDWGIRNSLLIRGVNERINGLSLSWSDDEPRELLCECADESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYPPS*
Ga0138513_1000310321	3300011000	Soil	MAMPERAVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVARADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYQQSSG*
Ga0150985_1071230373	3300012212	Avena Fatua Rhizosphere	LVVFVLFRSKDTKASIRHPGAKVATSDRAVRNSLLIRGVNERINGLSDSWFEDEPRELLCECGDESCIDAILVSRADYEVAMKHPGRYLVTSDHGDETGIRVLVTRDGYSIVEYP*
Ga0150985_1145003101	3300012212	Avena Fatua Rhizosphere	VRNSLLIRGVNERINGLSDSWFEDEPRELLCECGDESCIDGILVSRADYEVVMGHPGRYLVTSDHGDDAGIRVLVTRDGYSIV
Ga0157300_10172862	3300012884	Soil	MAMPERAARNSLLIRGVNERINGFSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYQQSSG*
Ga0157284_102255362	3300012893	Soil	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECGDESCIEAILVTRADYKVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPTSV*
Ga0157285_101406023	3300012897	Soil	LLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0157291_103610782	3300012902	Soil	MAMPERAARNSLLIRGVNERINGFSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMA
Ga0157282_100475622	3300012904	Soil	MPERAVRNSLLIRGVNEHITGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMEHPRRYLVNSDHNDETGIQVLMTRDGYSIVEYQPSAG*
Ga0157297_102645651	3300012914	Soil	VRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0157378_107549961	3300013297	Miscanthus Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSLSWSDDEPRELLCECASESCIEAILVTRADYEVALEHPGRYLITSDHGDETGVTLLSRDGYSIVEYKPSVG*
Ga0163162_107498142	3300013306	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPS*
Ga0157375_103701244	3300013308	Miscanthus Rhizosphere	VTTPDWGIRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEY
Ga0163163_105709361	3300014325	Switchgrass Rhizosphere	FPGAKVTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGMTLLSRDGYSIVEYRPS*
Ga0157380_113801042	3300014326	Switchgrass Rhizosphere	MTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYPPS*
Ga0157377_103152233	3300014745	Miscanthus Rhizosphere	EMTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECGDESCIEAILVTRADYKVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPS*
Ga0157379_101386771	3300014968	Switchgrass Rhizosphere	GVNESINGLSLSWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG*
Ga0157376_118937462	3300014969	Miscanthus Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGMTLL
Ga0173483_100044285	3300015077	Soil	MAMPERAVRNSLLIRGVNERINGLSDPWFDDDPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYQQSSG*
Ga0132258_102754491	3300015371	Arabidopsis Rhizosphere	AKVTTPDWGVRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGMTLLSRDGYSIVEYRPS*
Ga0132255_1030273791	3300015374	Arabidopsis Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDG
Ga0163161_102481524	3300017792	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGMTLLSRDGYSIVEYRPS
Ga0184608_100438931	3300018028	Groundwater Sediment	VATPERTVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLTARDGYLIVEYQQSSG
Ga0184620_100177954	3300018051	Groundwater Sediment	IRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLTARDGYLIVEYQQSPG
Ga0184624_102122453	3300018073	Groundwater Sediment	MRERAVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVTRADYEVAMDEPGRYLVTSAHCGETGVTLLMTRDAYSIVEYRQSSG
Ga0173481_100067806	3300019356	Soil	MAMPERAARNSLLIRGVNERINGFSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYQQSSG
Ga0222621_11002803	3300021510	Groundwater Sediment	NERINGLSDSWFDDEPRELLCECGDESCIEAILVTRADYEVAMDEPGRYLVTSAHCGETGVTLLMTRDAYSIVEYRQSSG
Ga0222623_100973411	3300022694	Groundwater Sediment	KASIQHPEANVATPERTVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLTARDGYLIVEYQQSSG
Ga0247802_10341491	3300023077	Soil	GVNERINGFSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYQQSSG
Ga0207688_101678413	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPTSV
Ga0207649_106157471	3300025920	Corn Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG
Ga0207681_108623752	3300025923	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNR
Ga0207687_114417092	3300025927	Miscanthus Rhizosphere	MTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECGDESCIEAILVTRADYKVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYPPS
Ga0207689_105922733	3300025942	Miscanthus Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPTSV
Ga0207668_107493871	3300025972	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG
Ga0207703_114758892	3300026035	Switchgrass Rhizosphere	VTTPDWGIRNSLLIRGVNERINGLSLSWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYPPS
Ga0207708_104146653	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VTTPDWGIRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEHPGRYLVTSDHGDETGMTLLSRDGYSIVEYRPTSV
Ga0207702_123130991	3300026078	Corn Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTREDYEVALEYPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG
Ga0207674_112457752	3300026116	Corn Rhizosphere	MAMPERAVRNSLLIRGVNERINGLSDSWFDEEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYQQSTG
Ga0207428_101871561	3300027907	Populus Rhizosphere	VAAPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNSDHGDETGIRVLMTRGGYSIVEYPQSSG
Ga0268264_113752371	3300028381	Switchgrass Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSISWSDDEPRELLCECANESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGVTLLNRDGYSIVEYRPSAG
Ga0247822_103470504	3300028592	Soil	VATPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNSDHGDETGIRVLMTRGGYSIVEYPQSSG
Ga0307301_100386231	3300028719	Soil	VATPERTVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLRARDG
Ga0307318_100019109	3300028744	Soil	RNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVTRADYEVAMDEPGRYLVTSAHCGETGVTLLMTRDAYSIVEYRQSSG
Ga0307297_102545362	3300028754	Soil	SIRHPGAKVATSDRAVRNSLLIRGVNERINGLSDSWFEDEPRELLCECGDESCIDAILVSRADYEVAMEHPGHYLVNADHGDDTGVRVLMTRDGYSIVEYPHSSR
Ga0307292_100822361	3300028811	Soil	RINGLSDSWFDDEPRELLCECGDESCIEAILVTRADYEVAMDEPGRYLVTSAHCGETGVTLLMTRDAYSIVEYRQSSG
Ga0307286_100092432	3300028876	Soil	VATPERTVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLTARDGYLIVEYQQTSG
Ga0307277_100988283	3300028881	Soil	VATSDRAVRNSLLIRGVNERINGLSDSWFEDEPRELLCECGDESCIDAILVSRADYEVAMEHPGHYLVNADHGDDTGVRVLMTRDGYSIVEYPHSSR
Ga0247827_105271332	3300028889	Soil	VATPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNSDHGDETGIRVLMTRGGY
Ga0308201_100451163	3300031091	Soil	SIRHPEANVATPERTVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLTARDGYLIVEYQQSSG
Ga0307501_101466191	3300031152	Soil	VATPERAVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDDSCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGSQVLMARDGYSIVEYQQSSG
Ga0310887_100927001	3300031547	Soil	VAAPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNSDHGDETGIRVLMTRGGYSIVEYPQSSA
Ga0307408_1002702302	3300031548	Rhizosphere	VTTPDGGVRNSLLIRGVNERINGLSHSWSDDEPRELLCECGDESCIEAILVTRADYEVALELPGRYLVTSAHGKETGVTPIMNRDGYSIVEYRPIAG
Ga0310886_101551345	3300031562	Soil	VATPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMA
Ga0307405_101580163	3300031731	Rhizosphere	MSYDLCRELYIVSFWSCLLSQNTKASIRHPATMEVVVTTRERAARNSLLIREVNERITGLSDSWFDGEPRELLCECGDGSCIEAILVTRGDYEVALDQPGRYLVNSDHSDEPGIRVLMKRDGYSIVEYRQDSD
Ga0307413_106704191	3300031824	Rhizosphere	RAKVTTPDGGVRNSLLIRGVNERINGLSHSWSDDEPRELLCECGDESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGRTLLMNRDGYSIVEYPQSSG
Ga0310892_103165912	3300031858	Soil	VATPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNSDHDDETGIRVLMTRDGYSIVEYPQSSG
Ga0310892_103170521	3300031858	Soil	MAMPERAVRNSLLIRGVNERINGLSDSWFEDEPRELLCECGDESCIEAILVSQADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVQYQQSSG
Ga0307406_105683953	3300031901	Rhizosphere	TTRERAARNSLLIREVNERITGLSDSWFDGEPRELLCECGDGGCIEAILVTRGDYEVALDQPDRYLVNSDHSDEPGIRVLMKRDGYSIVEYRQDSD
Ga0307406_106464812	3300031901	Rhizosphere	VTTPDGGVRNSLLIRGVNERINGLSHSWSDDEPRELLCECGDESCIEAILVTRADYEVALELPGCYLVTSAHGEETGVTPLMNRDGYSIVEYQESSG
Ga0307406_116487332	3300031901	Rhizosphere	VTTPDWGVRNSLLIRGVNERINGLSMSWSDDEPRELLCECGDESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGRTLLMNRDGYSIVEYPQSSG
Ga0310900_105669782	3300031908	Soil	MAMPERAVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIAAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYQQSSG
Ga0307412_102253373	3300031911	Rhizosphere	VTTRERAARNSLLIREVNERITGLSDSWFDGEPRELLCECGDGGCIEAILVTRGDYEVALDQPGRYLVNSDHSDEPGIRVLMKRDGYSIVEYRQDSD
Ga0308175_1001309144	3300031938	Soil	VATSDRAVRNSLLIRGVNERIKALSDSWFEDEPRELLCECGNESCIDAILVSRADYEVAMKHPGHYLVNADHGDDTGVRVLMTRDEYSIVEYAQSSR
Ga0310885_104135822	3300031943	Soil	MAMPERAVRNSLLIRGVNERINGLSDSWFDDEPRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYQQSSG
Ga0307409_1000884014	3300031995	Rhizosphere	MEVVVTTRERAARNSLLIREVNERITGLSDSWFDGEPRELLCECGDGSCIEAILVTRGDYEVALDQPGRYLVNSDHSDEPGIRVLMKRDGYSIVEYRQDSD
Ga0307416_1000473524	3300032002	Rhizosphere	VTTRERAARNSLLIREVNERITGLSDSWFDGEPRELLCECGDGSCIEAILVTRGDYEVALDQPGRYLVNSDHSDEPGIRVLMKRDGYSIVEYRQDSD
Ga0307416_1001043403	3300032002	Rhizosphere	VTTPDGGVRNSLLIRGVNERINGLSHSWSDDEPRELLCECGDESCIEAILVTRADYEVALELPGRYLVTSAHGEETGVTPLMNRDGYSIVEYQESSG
Ga0307416_1010420212	3300032002	Rhizosphere	VENTKTLIRHPWASARAKVTTPDWGVRNSLLIRGVNERINGLSMSWSDDEPRELLCECGDESCIEAILVTRADYEVALEHPGRYLVTSDHGDETGRTLLMNRDGYSIVEYPQSSG
Ga0310897_101530541	3300032003	Soil	MAMPERAVRNSLLIRGVNERINGLSDSWFDDELRELLCECGDESCIEAILVSRADYEVAMGHPGHYLVNSDHSDETGIQVLMARDGYSIVEYQQSSG
Ga0310906_100034954	3300032013	Soil	VAAPERTVRNSLLIRGVNERINGLSDSWLDDEPRELLCECGDESCIEAILVSRADYEVAMGRPGRYLVNADHGDETGIRVLMTRDGYSIVEYPQSSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078900

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences