Metagenome / Metatranscriptome Family F078899

Basic Information
Family ID	F078899
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	66 residues
Representative Sequence	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH
Number of Associated Samples	101
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.69 %
% of genes near scaffold ends (potentially truncated)	39.66 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (77.586 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.103 % of family members)
Environment Ontology (ENVO)	Unclassified (50.862 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.069 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.59% β-sheet: 0.00% Coil/Unstructured: 29.41%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00255	GSHPx	25.00
PF00126	HTH_1	20.69
PF03466	LysR_substrate	15.52
PF01799	Fer2_2	7.76
PF03450	CO_deh_flav_C	4.31
PF00120	Gln-synt_C	1.72
PF01541	GIY-YIG	0.86
PF03741	TerC	0.86
PF13378	MR_MLE_C	0.86
PF14127	DUF4294	0.86
PF02738	MoCoBD_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	25.00
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.59 %
Unclassified	root	N/A	22.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.59 %
Unclassified	root	N/A	22.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.59 %
Unclassified	root	N/A	22.41 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.34 %
Unclassified	root	N/A	22.41 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.86 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	23.28 %
Unclassified	root	N/A	22.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.41 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	3.45 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.41 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.45 %
Rhodovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae	0.86 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.41 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.45 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.86 %
Rhodovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio	0.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.41 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.45 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.86 %
Rhodovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio	0.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.41 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.45 %
Mucilaginibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter	0.86 %
Rhodovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio	0.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002128\|JGI24036J26619_10053836	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300002155\|JGI24033J26618_1073044	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300004114\|Ga0062593_101581229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	710	Open in IMG/M
3300004156\|Ga0062589_102473717	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300004479\|Ga0062595_101928912	Not Available	567	Open in IMG/M
3300005290\|Ga0065712_10628770	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300005327\|Ga0070658_10952823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	746	Open in IMG/M
3300005328\|Ga0070676_10869472	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300005330\|Ga0070690_100291888	All Organisms → cellular organisms → Bacteria → Proteobacteria	1166	Open in IMG/M
3300005331\|Ga0070670_100205831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1710	Open in IMG/M
3300005340\|Ga0070689_100233231	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300005353\|Ga0070669_100682053	Not Available	866	Open in IMG/M
3300005353\|Ga0070669_101549300	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300005354\|Ga0070675_101112349	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300005354\|Ga0070675_101405080	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300005354\|Ga0070675_101767084	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300005355\|Ga0070671_100106902	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300005355\|Ga0070671_101173147	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300005440\|Ga0070705_100089068	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300005456\|Ga0070678_101871716	Not Available	566	Open in IMG/M
3300005548\|Ga0070665_100534976	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184	Open in IMG/M
3300005585\|Ga0049084_10220202	Not Available	643	Open in IMG/M
3300005617\|Ga0068859_102038524	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300005618\|Ga0068864_100109023	All Organisms → cellular organisms → Bacteria → Proteobacteria	2464	Open in IMG/M
3300005618\|Ga0068864_100586614	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300005840\|Ga0068870_10670125	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300005840\|Ga0068870_11014412	Not Available	592	Open in IMG/M
3300006059\|Ga0075017_101088542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	624	Open in IMG/M
3300006196\|Ga0075422_10181521	Not Available	856	Open in IMG/M
3300006237\|Ga0097621_100577536	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300006237\|Ga0097621_101296252	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300006358\|Ga0068871_101492448	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300006953\|Ga0074063_12513748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	709	Open in IMG/M
3300006969\|Ga0075419_10513387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	834	Open in IMG/M
3300009094\|Ga0111539_10932947	Not Available	1009	Open in IMG/M
3300009094\|Ga0111539_11544059	Not Available	770	Open in IMG/M
3300009098\|Ga0105245_10917167	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M
3300009101\|Ga0105247_10921274	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300009148\|Ga0105243_10051035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3270	Open in IMG/M
3300009156\|Ga0111538_10724906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1259	Open in IMG/M
3300009159\|Ga0114978_10004176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	11731	Open in IMG/M
3300009161\|Ga0114966_10004384	All Organisms → cellular organisms → Bacteria → Proteobacteria	12148	Open in IMG/M
3300009176\|Ga0105242_10240270	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300009553\|Ga0105249_11461883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	756	Open in IMG/M
3300009661\|Ga0105858_1107146	Not Available	757	Open in IMG/M
3300010400\|Ga0134122_11668164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio	664	Open in IMG/M
3300010403\|Ga0134123_10230517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1598	Open in IMG/M
3300010885\|Ga0133913_10388005	All Organisms → cellular organisms → Bacteria	3692	Open in IMG/M
3300011119\|Ga0105246_10046074	All Organisms → cellular organisms → Bacteria → Proteobacteria	2973	Open in IMG/M
3300012891\|Ga0157305_10040157	Not Available	957	Open in IMG/M
3300012895\|Ga0157309_10146369	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300012898\|Ga0157293_10260461	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300012899\|Ga0157299_10062222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	871	Open in IMG/M
3300012901\|Ga0157288_10007833	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300012902\|Ga0157291_10166528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	669	Open in IMG/M
3300012904\|Ga0157282_10009657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1709	Open in IMG/M
3300012906\|Ga0157295_10228740	Not Available	610	Open in IMG/M
3300012907\|Ga0157283_10042076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1004	Open in IMG/M
3300013296\|Ga0157374_12805973	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300013306\|Ga0163162_11299971	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300013308\|Ga0157375_10367951	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300014325\|Ga0163163_12482508	Not Available	576	Open in IMG/M
3300014969\|Ga0157376_10548536	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300015077\|Ga0173483_10472837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	662	Open in IMG/M
3300015373\|Ga0132257_100171038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2558	Open in IMG/M
3300017965\|Ga0190266_10004847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2997	Open in IMG/M
3300017965\|Ga0190266_10086142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1246	Open in IMG/M
3300018031\|Ga0184634_10550786	Not Available	510	Open in IMG/M
3300018067\|Ga0184611_1011892	All Organisms → cellular organisms → Bacteria → Proteobacteria	2506	Open in IMG/M
3300018073\|Ga0184624_10065478	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300018081\|Ga0184625_10631225	Not Available	521	Open in IMG/M
3300018083\|Ga0184628_10252135	Not Available	927	Open in IMG/M
3300018469\|Ga0190270_10900592	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300018476\|Ga0190274_12222138	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300019263\|Ga0184647_1435026	Not Available	512	Open in IMG/M
3300019362\|Ga0173479_10034290	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300020027\|Ga0193752_1265672	Not Available	619	Open in IMG/M
3300021082\|Ga0210380_10322030	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300021082\|Ga0210380_10557673	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300021363\|Ga0193699_10245252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	746	Open in IMG/M
3300023184\|Ga0214919_10029492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5777	Open in IMG/M
3300025271\|Ga0207666_1037587	Not Available	753	Open in IMG/M
3300025315\|Ga0207697_10004215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6911	Open in IMG/M
3300025893\|Ga0207682_10002243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8727	Open in IMG/M
3300025899\|Ga0207642_10067645	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300025901\|Ga0207688_10027894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3105	Open in IMG/M
3300025907\|Ga0207645_10123687	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300025908\|Ga0207643_10029889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3031	Open in IMG/M
3300025925\|Ga0207650_10954779	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300025925\|Ga0207650_11847357	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300025927\|Ga0207687_10436839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1083	Open in IMG/M
3300025931\|Ga0207644_10189968	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300025931\|Ga0207644_10464386	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300025935\|Ga0207709_10908990	Not Available	716	Open in IMG/M
3300025938\|Ga0207704_10120864	All Organisms → cellular organisms → Bacteria → Proteobacteria	1792	Open in IMG/M
3300025940\|Ga0207691_11287915	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300025961\|Ga0207712_10090085	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter	2256	Open in IMG/M
3300025961\|Ga0207712_10210315	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300026023\|Ga0207677_10325193	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300026023\|Ga0207677_12285589	Not Available	503	Open in IMG/M
3300026067\|Ga0207678_10978393	Not Available	749	Open in IMG/M
3300026067\|Ga0207678_11578866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	578	Open in IMG/M
3300026089\|Ga0207648_11052809	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300028379\|Ga0268266_10193772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1857	Open in IMG/M
3300028381\|Ga0268264_11971490	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300028577\|Ga0265318_10074363	All Organisms → cellular organisms → Bacteria → Proteobacteria	1258	Open in IMG/M
3300028802\|Ga0307503_10194902	Not Available	955	Open in IMG/M
3300031199\|Ga0307495_10193065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	555	Open in IMG/M
3300031238\|Ga0265332_10188602	Not Available	858	Open in IMG/M
3300031562\|Ga0310886_10582630	Not Available	685	Open in IMG/M
3300031908\|Ga0310900_11268206	Not Available	615	Open in IMG/M
3300031938\|Ga0308175_102173606	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300032075\|Ga0310890_10120579	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300032211\|Ga0310896_10835591	Not Available	530	Open in IMG/M
3300032421\|Ga0310812_10404561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	614	Open in IMG/M
3300033475\|Ga0310811_11358244	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.17%
Environmental	Environmental	44.83%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.17%
Terrestrial	Environmental → Terrestrial	32.76%
Aquatic	Environmental → Aquatic	12.07%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.34%
Soil	Environmental → Terrestrial → Soil	32.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.38%
Freshwater	Environmental → Aquatic → Freshwater	6.90%
Sediment	Environmental → Aquatic → Sediment	5.17%
Roots	Host-Associated → Plants → Roots	3.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	19.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.17%
Lake	Environmental → Aquatic → Freshwater → Lake	3.45%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.59%
Loam	Environmental → Terrestrial → Soil → Loam	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	19.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.31%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.45%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.45%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.59%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.72%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.86%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24036J26619_100538362	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDXIMWAVAAVRRLFTRSRADGKLLHNH*
JGI24033J26618_10730441	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	MEMTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH*
Ga0062593_1015812291	3300004114	Soil	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0062589_1024737172	3300004156	Soil	MTTYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0062595_1019289122	3300004479	Soil	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH*
Ga0065712_106287701	3300005290	Miscanthus Rhizosphere	ASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH*
Ga0070658_109528231	3300005327	Corn Rhizosphere	MIKYTEDASKSDLYARVRLAPVNAIQRAIAVDTLRQADALTDAIMWAVAAVRRLFSRTGNSAGRLLHGN*
Ga0070676_108694722	3300005328	Miscanthus Rhizosphere	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH*
Ga0070690_1002918882	3300005330	Switchgrass Rhizosphere	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH*
Ga0070670_1002058312	3300005331	Switchgrass Rhizosphere	MTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH*
Ga0070689_1002332311	3300005340	Switchgrass Rhizosphere	SKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH
Ga0070669_1006820532	3300005353	Switchgrass Rhizosphere	MTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH*
Ga0070669_1015493001	3300005353	Switchgrass Rhizosphere	LYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH*
Ga0070675_1011123491	3300005354	Miscanthus Rhizosphere	ASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0070675_1014050802	3300005354	Miscanthus Rhizosphere	KSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH*
Ga0070675_1017670842	3300005354	Miscanthus Rhizosphere	KSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH*
Ga0070671_1001069021	3300005355	Switchgrass Rhizosphere	SDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH*
Ga0070671_1011731472	3300005355	Switchgrass Rhizosphere	ASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH*
Ga0070705_1000890683	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0070678_1018717162	3300005456	Miscanthus Rhizosphere	MIKYTEDASKSDLYARVRLAPVNAIQRAIAVDTLRQADALTDAIMWAVATVRRLFSRTGNSAGRLLHGN*
Ga0070665_1005349762	3300005548	Switchgrass Rhizosphere	MTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0049084_102202022	3300005585	Freshwater Lentic	MSKYDEKASKTDLYARVKLVPVNAIQRALAVNALRDADAISNGIMWAMKGIGRLFTRANSGQLIQNH*
Ga0068859_1020385241	3300005617	Switchgrass Rhizosphere	SEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0068864_1001090231	3300005618	Switchgrass Rhizosphere	LYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0068864_1005866143	3300005618	Switchgrass Rhizosphere	YSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0068870_106701252	3300005840	Miscanthus Rhizosphere	SKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH
Ga0068870_110144121	3300005840	Miscanthus Rhizosphere	MTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0075017_1010885421	3300006059	Watersheds	MLKYDEKASKSDLYARIKAAPVNARQRAAAMNALRDADAVSDGIMWMVTAIRRLFTHTHSGASQLSHTH*
Ga0075422_101815212	3300006196	Populus Rhizosphere	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAAAAVRRLFTRSRGDGKLLHYH
Ga0097621_1005775363	3300006237	Miscanthus Rhizosphere	YARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0097621_1012962521	3300006237	Miscanthus Rhizosphere	MVNYSEKSSKSDLYARVKLAPVNAIQRAVAVNALRDADAISNAIVWALVAIRRLFGRGSDGANSLLHNH*
Ga0068871_1014924481	3300006358	Miscanthus Rhizosphere	SDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0074063_125137482	3300006953	Soil	MTKYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVKAVRRLLTRSGADGKLLHNH*
Ga0075419_105133872	3300006969	Populus Rhizosphere	MTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIIWAAAAVRRLFTRSRADGKLLHNH*
Ga0111539_109329472	3300009094	Populus Rhizosphere	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRADGKLLHNH*
Ga0111539_115440592	3300009094	Populus Rhizosphere	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIIWAAAAVRRLFTRS
Ga0105245_109171672	3300009098	Miscanthus Rhizosphere	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIVWAVAAIRRLFTRSRAEGKLLHNH*
Ga0105247_109212741	3300009101	Switchgrass Rhizosphere	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0105243_100510354	3300009148	Miscanthus Rhizosphere	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH*
Ga0111538_107249062	3300009156	Populus Rhizosphere	MEMTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRADGKLLHNH*
Ga0114978_100041766	3300009159	Freshwater Lake	MIMSKYDEKASKTDLYARVKLAPVNAIQRAVAVNALRDADAISNGIMWAMKGIGRLFARANSGQLIQNH*
Ga0114966_100043844	3300009161	Freshwater Lake	MIMSKYDEKASKTDLYARVKLAPVNAIQRAVAVNALRDADAISNGIMWAMKGIGRLFTRANSGQLIQNH*
Ga0105242_102402703	3300009176	Miscanthus Rhizosphere	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAVIRRLFTRARAEGKLLHNH*
Ga0105249_114618832	3300009553	Switchgrass Rhizosphere	MEMTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH*
Ga0105858_11071461	3300009661	Permafrost Soil	MNMLKYDETASKSDLYARVKLAPVNAIQRAVALNALRDADAISNGILWVFTAIRRLFTRANTDASHLLHN*
Ga0134122_116681642	3300010400	Terrestrial Soil	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0134123_102305172	3300010403	Terrestrial Soil	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAVIRRLFTRARAEGKLLHNH*
Ga0133913_103880055	3300010885	Freshwater Lake	VNAIQRAVAVNALRDADAISNGIMWAMKGIGRLFTRANSGQLIQNH*
Ga0105246_100460742	3300011119	Miscanthus Rhizosphere	MEMTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0157305_100401572	3300012891	Soil	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAAAAVRRLFTRS
Ga0157309_101463691	3300012895	Soil	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRGDGKLLHYH*
Ga0157293_102604611	3300012898	Soil	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLL
Ga0157299_100622222	3300012899	Soil	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIIWAAAAVRRLFTRSRADGKLLHNH*
Ga0157288_100078331	3300012901	Soil	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVKAVRRLLTRSGADGKLLHNH*
Ga0157291_101665282	3300012902	Soil	MEMTTYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAAAAVRRLFTRSRADGKLLHNH*
Ga0157282_100096572	3300012904	Soil	MEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAAAAVRRLFTRSRGDGKLLHYH*
Ga0157295_102287402	3300012906	Soil	PTGLSEDSFSNSRIKEMEMTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0157283_100420762	3300012907	Soil	MEMTTYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0157374_128059731	3300013296	Miscanthus Rhizosphere	KASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0163162_112999711	3300013306	Switchgrass Rhizosphere	MEMTNHSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH*
Ga0157375_103679511	3300013308	Miscanthus Rhizosphere	DLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH*
Ga0163163_124825082	3300014325	Switchgrass Rhizosphere	MEMTKYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0157376_105485363	3300014969	Miscanthus Rhizosphere	NYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0173483_104728372	3300015077	Soil	MEMTTYSEKASKSDLYARVKLAPVNEIQRAVAVNALRDADAITDAIMWAAAAVRRLFTRSRADGKLLHNH*
Ga0132257_1001710383	3300015373	Arabidopsis Rhizosphere	MEMTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH*
Ga0190266_100048471	3300017965	Soil	KSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH
Ga0190266_100861422	3300017965	Soil	MTNYSEKASKSDLYARVKLAPVNEIQRAVAMNALRDADAITDAIMWAAAAVRRLFTRSRADGKLLHNH
Ga0184634_105507862	3300018031	Groundwater Sediment	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIIWAAAAVRRLFTRSRADGKLLHNH
Ga0184611_10118922	3300018067	Groundwater Sediment	MTTYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIIWAAAAVRRLFTRSRADGKLLHNH
Ga0184624_100654783	3300018073	Groundwater Sediment	MTTYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH
Ga0184625_106312251	3300018081	Groundwater Sediment	MTKYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH
Ga0184628_102521352	3300018083	Groundwater Sediment	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH
Ga0190270_109005922	3300018469	Soil	MTTYNEKASKSDLYARVKLAPVNAIEREIAVAALRDADAISDAIVWVITAVRRLFTRTPASGKLLPNH
Ga0190274_122221382	3300018476	Soil	MTNHSEKASKSDLYARVKLTPVNAIQRAVAVNALRDADAITDAIMWAVTAVRRLFTRSRADGKLLHNH
Ga0184647_14350261	3300019263	Groundwater Sediment	MTKYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAAAAVRRVFTRSRADGKLLHNH
Ga0173479_100342902	3300019362	Soil	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH
Ga0193752_12656721	3300020027	Soil	MVNYSEKASKSDLYARVTLAPVNAIQRAVAVNALRDAEAISNAIVWAMSAVRRLVSRAGNGANNLLHNH
Ga0210380_103220301	3300021082	Groundwater Sediment	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWTAAAVRRLFTRSRADGKLLHNH
Ga0210380_105576731	3300021082	Groundwater Sediment	MTKYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVKAVRRLLTRSGA
Ga0193699_102452522	3300021363	Soil	MVKYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAISDAIMWMVAAVRRLFTRSSSDARLLHDH
Ga0214919_100294924	3300023184	Freshwater	MSKYDEKASKTDLYARVKLAPVNAIQRAVAVNALRDADAISNGIMWAMKGIGRLFTRANSGQLIQNH
Ga0207666_10375871	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MTNYSEKASKLDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH
Ga0207697_100042152	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH
Ga0207682_100022431	3300025893	Miscanthus Rhizosphere	KASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH
Ga0207642_100676452	3300025899	Miscanthus Rhizosphere	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH
Ga0207688_100278942	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTTYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH
Ga0207645_101236874	3300025907	Miscanthus Rhizosphere	SKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH
Ga0207643_100298893	3300025908	Miscanthus Rhizosphere	MTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH
Ga0207650_109547792	3300025925	Switchgrass Rhizosphere	TNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH
Ga0207650_118473572	3300025925	Switchgrass Rhizosphere	SEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIIWAAAAVRRLFTRSRADGKLLHNH
Ga0207687_104368392	3300025927	Miscanthus Rhizosphere	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAVIRRLFTRARAEGKLLHNH
Ga0207644_101899684	3300025931	Switchgrass Rhizosphere	EKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH
Ga0207644_104643861	3300025931	Switchgrass Rhizosphere	SDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHNH
Ga0207709_109089902	3300025935	Miscanthus Rhizosphere	ASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRADGKLLHN
Ga0207704_101208641	3300025938	Miscanthus Rhizosphere	MTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH
Ga0207691_112879152	3300025940	Miscanthus Rhizosphere	ARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH
Ga0207712_100900854	3300025961	Switchgrass Rhizosphere	DSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHN
Ga0207712_102103151	3300025961	Switchgrass Rhizosphere	MTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVVAVRRLFTRSRA
Ga0207677_103251931	3300026023	Miscanthus Rhizosphere	NYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHNH
Ga0207677_122855891	3300026023	Miscanthus Rhizosphere	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADG
Ga0207678_109783931	3300026067	Corn Rhizosphere	MIKYTEDVSKSDLYARVRLAPVNEIQRAIAVDTLRQADALTDAILWTISAVRRLFSRGGSDSTCPRESAEL
Ga0207678_115788661	3300026067	Corn Rhizosphere	MIKYTEDASKSDLYARVRLAPVNAIQRAIAVDTLRQADALTDAIMWAVATVRRLFSRTGNSAGRLLHGN
Ga0207648_110528091	3300026089	Miscanthus Rhizosphere	YARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH
Ga0268266_101937722	3300028379	Switchgrass Rhizosphere	MTNYSEKDSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDVIMWAVAAVRRLFTRSRADGKLLHNH
Ga0268264_119714902	3300028381	Switchgrass Rhizosphere	DSKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRAEGKLLHN
Ga0265318_100743633	3300028577	Rhizosphere	MSKYAEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAISNAIIWAISAVRRLASRSGTSASHLLHNH
Ga0307503_101949021	3300028802	Soil	MTKYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVKAVRRLLTRSGADGKLLHNH
Ga0307495_101930652	3300031199	Soil	SEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH
Ga0265332_101886021	3300031238	Rhizosphere	SNFGIKETEMSKYAEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAISNAIIWAISAVRRLASRSGTSASHLLHNH
Ga0310886_105826301	3300031562	Soil	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAIRRLFTRSRA
Ga0310900_112682062	3300031908	Soil	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAAAAVRRLFTRSRADGKLLHNH
Ga0308175_1021736062	3300031938	Soil	MIRYTEDASKLDLYARVRLAPVNAIQREIAVDTLRQADALTDALLWAITAVRRLFSRGGSDSSRLVHGN
Ga0310890_101205791	3300032075	Soil	SKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHNH
Ga0310896_108355911	3300032211	Soil	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVKAVRRLLTRSGADGKLLHNH
Ga0310812_104045611	3300032421	Soil	MTKYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKLLHN
Ga0310811_113582442	3300033475	Soil	MTNYSEKASKSDLYARVKLAPVNAIQRAVAVNALRDADAITDAIMWAVAAVRRLFTRSRADGKL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078899

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign