NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F078867

Metagenome / Metatranscriptome Family F078867

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F078867
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 58 residues
Representative Sequence MFVKTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMMTRLNRRE
Number of Associated Samples 98
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 89.66 %
% of genes near scaffold ends (potentially truncated) 23.28 %
% of genes from short scaffolds (< 2000 bps) 78.45 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands
(10.345 % of family members)
Environment Ontology (ENVO) Unclassified
(19.828 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(24.138 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 56.98%    β-sheet: 0.00%    Coil/Unstructured: 43.02%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF01713Smr 32.76
PF01553Acyltransferase 30.17
PF01434Peptidase_M41 0.86
PF00072Response_reg 0.86
PF07992Pyr_redox_2 0.86
PF00044Gp_dh_N 0.86
PF00775Dioxygenase_C 0.86
PF03840SecG 0.86
PF13185GAF_2 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0057Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenaseCarbohydrate transport and metabolism [G] 0.86
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 0.86
COG1314Protein translocase subunit SecGIntracellular trafficking, secretion, and vesicular transport [U] 0.86
COG3485Protocatechuate 3,4-dioxygenase beta subunitSecondary metabolites biosynthesis, transport and catabolism [Q] 0.86

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003310|D1draft_1000090All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii179663Open in IMG/M
3300003310|D1draft_1001447All Organisms → cellular organisms → Bacteria23196Open in IMG/M
3300004011|Ga0055460_10153064All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae694Open in IMG/M
3300004058|Ga0055498_10145892All Organisms → cellular organisms → Bacteria → Nitrospirae514Open in IMG/M
3300004061|Ga0055487_10105173All Organisms → cellular organisms → Bacteria → Nitrospirae518Open in IMG/M
3300004071|Ga0055486_10062884All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae773Open in IMG/M
3300004114|Ga0062593_100004162All Organisms → cellular organisms → Bacteria5752Open in IMG/M
3300004281|Ga0066397_10081301All Organisms → cellular organisms → Bacteria → Nitrospirae647Open in IMG/M
3300004282|Ga0066599_100036734All Organisms → cellular organisms → Bacteria1869Open in IMG/M
3300004282|Ga0066599_100191609All Organisms → cellular organisms → Bacteria → Nitrospirae1103Open in IMG/M
3300004282|Ga0066599_101076630All Organisms → cellular organisms → Bacteria → Nitrospirae591Open in IMG/M
3300004479|Ga0062595_101822351All Organisms → cellular organisms → Bacteria → Nitrospirae579Open in IMG/M
3300004480|Ga0062592_100401922All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1090Open in IMG/M
3300004643|Ga0062591_100337342All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1210Open in IMG/M
3300005183|Ga0068993_10028092All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1497Open in IMG/M
3300005204|Ga0068997_10106829All Organisms → cellular organisms → Bacteria → Nitrospirae610Open in IMG/M
3300005218|Ga0068996_10024412All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1011Open in IMG/M
3300005332|Ga0066388_100921790All Organisms → cellular organisms → Bacteria1449Open in IMG/M
3300005332|Ga0066388_103375060All Organisms → cellular organisms → Bacteria → Nitrospirae816Open in IMG/M
3300005340|Ga0070689_100792254All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae833Open in IMG/M
3300005341|Ga0070691_10766239All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae585Open in IMG/M
3300005367|Ga0070667_101990650All Organisms → cellular organisms → Bacteria → Nitrospirae547Open in IMG/M
3300005441|Ga0070700_100256086All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1258Open in IMG/M
3300005444|Ga0070694_100288271All Organisms → cellular organisms → Bacteria → Nitrospirae1254Open in IMG/M
3300005444|Ga0070694_100341468All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1158Open in IMG/M
3300005445|Ga0070708_101944046All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.545Open in IMG/M
3300005459|Ga0068867_100525641All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300005518|Ga0070699_100899090All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae811Open in IMG/M
3300005545|Ga0070695_100943345All Organisms → cellular organisms → Bacteria → Nitrospirae699Open in IMG/M
3300005829|Ga0074479_10986919All Organisms → cellular organisms → Bacteria → Nitrospirae907Open in IMG/M
3300005831|Ga0074471_10496029All Organisms → cellular organisms → Bacteria → Nitrospirae608Open in IMG/M
3300005833|Ga0074472_10328528All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300005833|Ga0074472_10380332All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.676Open in IMG/M
3300005833|Ga0074472_10468670All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae567Open in IMG/M
3300005833|Ga0074472_10643203All Organisms → cellular organisms → Bacteria → Nitrospirae764Open in IMG/M
3300005836|Ga0074470_10525037All Organisms → cellular organisms → Bacteria11800Open in IMG/M
3300005836|Ga0074470_10656585All Organisms → cellular organisms → Bacteria → Nitrospirae671Open in IMG/M
3300005836|Ga0074470_10755859All Organisms → cellular organisms → Bacteria → Nitrospirae627Open in IMG/M
3300005836|Ga0074470_10947685All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii13403Open in IMG/M
3300005940|Ga0073913_10085729All Organisms → cellular organisms → Bacteria → Nitrospirae536Open in IMG/M
3300005992|Ga0073924_1063834All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae545Open in IMG/M
3300006041|Ga0075023_100527932All Organisms → cellular organisms → Bacteria → Nitrospirae536Open in IMG/M
3300006058|Ga0075432_10233623All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae740Open in IMG/M
3300006237|Ga0097621_100280146All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300006854|Ga0075425_100554586All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300006880|Ga0075429_101180432All Organisms → cellular organisms → Bacteria → Nitrospirae668Open in IMG/M
3300009078|Ga0105106_10020398All Organisms → cellular organisms → Bacteria4874Open in IMG/M
3300009091|Ga0102851_10037407All Organisms → cellular organisms → Bacteria3779Open in IMG/M
3300009091|Ga0102851_10960575All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.926Open in IMG/M
3300009111|Ga0115026_10377120All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1020Open in IMG/M
3300009131|Ga0115027_11628555All Organisms → cellular organisms → Bacteria → Nitrospirae534Open in IMG/M
3300009167|Ga0113563_10024840All Organisms → cellular organisms → Bacteria4643Open in IMG/M
3300009777|Ga0105164_10434666All Organisms → cellular organisms → Bacteria → Nitrospirae651Open in IMG/M
3300009798|Ga0105060_103980All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium815Open in IMG/M
3300010046|Ga0126384_11000593All Organisms → cellular organisms → Bacteria → Nitrospirae761Open in IMG/M
3300010399|Ga0134127_13304420All Organisms → cellular organisms → Bacteria → Nitrospirae527Open in IMG/M
3300010401|Ga0134121_10002118All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae17602Open in IMG/M
3300010401|Ga0134121_12445857All Organisms → cellular organisms → Bacteria → Nitrospirae563Open in IMG/M
3300010403|Ga0134123_10034873All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae3693Open in IMG/M
3300013296|Ga0157374_11698256All Organisms → cellular organisms → Bacteria → Nitrospirae656Open in IMG/M
3300014269|Ga0075302_1119830All Organisms → cellular organisms → Bacteria → Nitrospirae611Open in IMG/M
3300014313|Ga0075347_1127544All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae596Open in IMG/M
3300014318|Ga0075351_1010120All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira1328Open in IMG/M
3300014319|Ga0075348_1206167All Organisms → cellular organisms → Bacteria → Nitrospirae546Open in IMG/M
3300014326|Ga0157380_10047052All Organisms → cellular organisms → Bacteria3391Open in IMG/M
3300015360|Ga0163144_10133423All Organisms → cellular organisms → Bacteria → Nitrospirae3750Open in IMG/M
3300018064|Ga0187773_10171963All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1133Open in IMG/M
3300018469|Ga0190270_13337666All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae509Open in IMG/M
3300019361|Ga0173482_10007186All Organisms → cellular organisms → Bacteria2703Open in IMG/M
3300019377|Ga0190264_10269093All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1005Open in IMG/M
3300020059|Ga0193745_1007891All Organisms → cellular organisms → Bacteria2283Open in IMG/M
3300020167|Ga0194035_1000028All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira90146Open in IMG/M
3300021859|Ga0210334_10941359All Organisms → cellular organisms → Bacteria → Nitrospirae572Open in IMG/M
3300022549|Ga0212091_10053133All Organisms → cellular organisms → Bacteria1473Open in IMG/M
3300025521|Ga0210083_1002036All Organisms → cellular organisms → Bacteria2100Open in IMG/M
3300025899|Ga0207642_10347169All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira874Open in IMG/M
3300025899|Ga0207642_11142992All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae504Open in IMG/M
3300025905|Ga0207685_10512866All Organisms → cellular organisms → Bacteria → Nitrospirae633Open in IMG/M
3300025917|Ga0207660_10008085All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira6804Open in IMG/M
3300025921|Ga0207652_11463395All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae587Open in IMG/M
3300025938|Ga0207704_11471153All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae584Open in IMG/M
3300025941|Ga0207711_10016117All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira6203Open in IMG/M
3300025954|Ga0210135_1014909All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae756Open in IMG/M
3300025966|Ga0210105_1009042All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1430Open in IMG/M
3300025971|Ga0210102_1032188All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1132Open in IMG/M
3300025979|Ga0210078_1029348All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae732Open in IMG/M
3300026018|Ga0208418_1013501All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira806Open in IMG/M
3300026075|Ga0207708_10154707All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1808Open in IMG/M
3300026089|Ga0207648_11886238All Organisms → cellular organisms → Bacteria → Nitrospirae559Open in IMG/M
3300026888|Ga0209900_1007512All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae812Open in IMG/M
3300027393|Ga0209867_1003990All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira2087Open in IMG/M
3300027393|Ga0209867_1026903All Organisms → cellular organisms → Bacteria → Nitrospirae835Open in IMG/M
3300027646|Ga0209466_1080271All Organisms → cellular organisms → Bacteria → Nitrospirae659Open in IMG/M
3300027695|Ga0209966_1038233All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae993Open in IMG/M
3300027877|Ga0209293_10510942All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae631Open in IMG/M
3300027910|Ga0209583_10079210All Organisms → cellular organisms → Bacteria1224Open in IMG/M
3300027910|Ga0209583_10644461All Organisms → cellular organisms → Bacteria → Nitrospirae545Open in IMG/M
3300027915|Ga0209069_10405732All Organisms → cellular organisms → Bacteria → Nitrospirae748Open in IMG/M
3300027979|Ga0209705_10068327All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1952Open in IMG/M
3300031170|Ga0307498_10018959All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1537Open in IMG/M
3300031455|Ga0307505_10008312All Organisms → cellular organisms → Bacteria5439Open in IMG/M
3300031547|Ga0310887_10206957All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1070Open in IMG/M
3300031847|Ga0310907_10127759All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1138Open in IMG/M
3300031854|Ga0310904_10010545All Organisms → cellular organisms → Bacteria3727Open in IMG/M
3300031858|Ga0310892_10215486All Organisms → cellular organisms → Bacteria1164Open in IMG/M
3300031892|Ga0310893_10067284All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1237Open in IMG/M
3300031940|Ga0310901_10039587All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1489Open in IMG/M
3300032000|Ga0310903_10025982All Organisms → cellular organisms → Bacteria → Nitrospirae2043Open in IMG/M
3300032003|Ga0310897_10107247All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1119Open in IMG/M
3300032003|Ga0310897_10362468All Organisms → cellular organisms → Bacteria → Nitrospirae678Open in IMG/M
3300032179|Ga0310889_10116437All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira1159Open in IMG/M
3300033414|Ga0316619_11051136All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium712Open in IMG/M
3300034194|Ga0370499_0000435All Organisms → cellular organisms → Bacteria7396Open in IMG/M
3300034257|Ga0370495_0001135All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira8552Open in IMG/M
3300034257|Ga0370495_0013307All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae2436Open in IMG/M
3300034817|Ga0373948_0173382All Organisms → cellular organisms → Bacteria → Nitrospirae550Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands10.34%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)8.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil8.62%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.17%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands4.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.31%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.45%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.45%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand3.45%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland2.59%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands2.59%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater2.59%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil2.59%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.59%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.72%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.72%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.72%
Down-Flow Hanging Sponge ReactorEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor1.72%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.86%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.86%
WastewaterEnvironmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater0.86%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.86%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.86%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.86%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.86%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.86%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.86%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003310Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - L1-648F-DHSEngineeredOpen in IMG/M
3300004011Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004061Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004071Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004282Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sedimentEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005204Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2EnvironmentalOpen in IMG/M
3300005218Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005831Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBMEnvironmentalOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005940Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14EnvironmentalOpen in IMG/M
3300005992Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_14-Oct-14EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009777Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking waterEnvironmentalOpen in IMG/M
3300009798Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014269Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1EnvironmentalOpen in IMG/M
3300014313Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1EnvironmentalOpen in IMG/M
3300014318Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rdEnvironmentalOpen in IMG/M
3300014319Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300020167Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L239-20mEnvironmentalOpen in IMG/M
3300021859Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022549Cold Creek_combined assemblyEnvironmentalOpen in IMG/M
3300025521Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025954Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025966Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025971Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025979Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026018Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026888Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027393Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027695Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300034194Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17EnvironmentalOpen in IMG/M
3300034257Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
D1draft_1000090503300003310Down-Flow Hanging Sponge ReactorMMFVKTLAQTKMWGFWQYMFDFCNENFSCVLGSLTAIVLFFLAIVLGLGTMMTRLNRRE*
D1draft_100144773300003310Down-Flow Hanging Sponge ReactorMFVKTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGAMMTRLNNRRG*
Ga0055460_1015306423300004011Natural And Restored WetlandsMFVKTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVMGLGAMMTRLNNRRG*
Ga0055498_1014589223300004058Natural And Restored WetlandsMFVQTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAVVLGLGAMVTRLNNRRG*
Ga0055487_1010517313300004061Natural And Restored WetlandsNLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAVVLGLGAMVTRLNRRE*
Ga0055486_1006288423300004071Natural And Restored WetlandsMFVENLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAVVLGLGAMVTRLNRRE*
Ga0062593_10000416273300004114SoilMFVKALAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGAMMTHLNNRRGAR*
Ga0066397_1008130113300004281Tropical Forest SoilMLVKTLAQTKMWGFWQYMFDFCNESFTCVLGSLTAIILVFLALVLGLGTMMTHLNRRE*
Ga0066599_10003673423300004282FreshwaterMFVKTLAQTKMWGVWQYMFDFCNESFSCVLGSLTAIVLVFLAIVLGFGAMMTRLNKRE*
Ga0066599_10019160923300004282FreshwaterMFVKTLAQTKMWGLWQYMFDLCNESFSCVLGSLAAIVLVFLATVLGLNAMMTRRNKRE*
Ga0066599_10107663013300004282FreshwaterMFVKTLAQTKMWGFWQYMFDLCNESFPCVIGSLTVIIMIFLAIVMGLGTMMTRLNRRK*
Ga0062595_10182235113300004479SoilRYRRTEGKCQGGDTMFVKTLAQTKMWGFWQYMFDLCNESFSCVLGLLTAIILAFLAIVFGLSAMMTRLNRRE*
Ga0062592_10040192213300004480SoilMFVKTLAQTKMWGFWQYMFDFCHESFSCVLGSLTVIVLVFLAIVLGLGTMMTRLNRRE*
Ga0062591_10033734223300004643SoilMFVKTLAQTKMWGFWQYMFDFCHESFSCVLGSLTVIVLVFLPIVLGLGTMMTRLNRRE*
Ga0068993_1002809213300005183Natural And Restored WetlandsMFVKNLAQTKMWGFWQYMFDLCNEDFSCVIGSLTAVLLVFLAIVLGLGAMMTRLNNRRG*
Ga0068997_1010682923300005204Natural And Restored WetlandsMFVKTLAQTKMWGFWQYMFDFCNESFPCVLGSLTAILLVFLAIVLGLGAMMTRLNRRE*
Ga0068996_1002441213300005218Natural And Restored WetlandsMFVENLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLALGAMMTHLNNRRG*
Ga0066388_10092179033300005332Tropical Forest SoilMFGQILAQTKMWGFWQYMFDLCNEDFSCVLSSLTTMLLVFLAIVLGLGAMMTRLNNRRE*
Ga0066388_10337506013300005332Tropical Forest SoilMFGQILAQTKMWGFWQYMFDLCNEDFSCVLGSLTTMLLVFLAIVLGLGAMMTRLNNRRR*
Ga0070689_10079225413300005340Switchgrass RhizosphereMFVKTLAQTKMWGFWQYMFDFCNESFSCVLGSLTAISLVFLANVLGLGAMMTRLNNRRG*
Ga0070691_1076623913300005341Corn, Switchgrass And Miscanthus RhizosphereMFVKALAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLG
Ga0070667_10199065013300005367Switchgrass RhizosphereMFVKTLAQTKMWGFWQYMFDLCNESFSCVLGLLTAIILAFLAIVFGLSAMMTRLNRRE*
Ga0070700_10025608633300005441Corn, Switchgrass And Miscanthus RhizosphereMFVKTLAQTKMWGFWQYMFDFCNEDFSCVLGSLTAILLVFLAIVFGLGAMMTRINNKRG*
Ga0070694_10028827113300005444Corn, Switchgrass And Miscanthus RhizosphereMFVKILAQTKMWGFWQYMFDLCNESFPCVLGWLTAILFVFLAVLLGLIVMMTRLKNRRG*
Ga0070694_10034146813300005444Corn, Switchgrass And Miscanthus RhizosphereMFVKTLAQTKMWGFWQYMFDFCNESFSCVLGSLTAITLVFVAIVLGLGAMMTRLNRRE*
Ga0070708_10194404623300005445Corn, Switchgrass And Miscanthus RhizosphereMFVKILAQTKMWGFWQYMFDLCNESFPCVLGWLTAILVVFLAVLLGLIVMMTRLKNRRG*
Ga0068867_10052564123300005459Miscanthus RhizosphereMFVRTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGAMMTHLNNRRGAR*
Ga0070699_10089909023300005518Corn, Switchgrass And Miscanthus RhizosphereMFVKILAQTKMWGFWQYMFDLCHESFPCVLGWLTAILFVFLAVLLGLIVMMTRLKNRRG*
Ga0070695_10094334523300005545Corn, Switchgrass And Miscanthus RhizosphereTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGAMMTHLNNRRGAR*
Ga0074479_1098691913300005829Sediment (Intertidal)MFVKIMAKTEMWGFWQYMFDLCNESFPCVLGWLTGILLGFLAILLGLVTMMTRLNKKK*
Ga0074471_1049602923300005831Sediment (Intertidal)MFVKTLAQAKMWGFWQYMFDFCNESFSCVLGSLTAIVLVFLAIVLGLGAMMTRLNRRE*
Ga0074472_1032852833300005833Sediment (Intertidal)MFVKTLAQAKMWGFWQYMFDLCNEDFTCVLGSLTAILLVFLAIVLGLGAMMTHLNNRRG*
Ga0074472_1038033213300005833Sediment (Intertidal)MFAKTLAQTKMWGFWQYMFDLCHEDFSCVLGSLTAILLVFLAIVVGLGAMMTHLNKRRG*
Ga0074472_1046867023300005833Sediment (Intertidal)MFVITLAQTKMWGFWQYMFDFCNQSFSCVLGSLTAIILVFLAIVLGLGSMMTRLNRR
Ga0074472_1064320323300005833Sediment (Intertidal)MFAKTLAQTKMWGFWQYMFDLCNESFPCVIGSLTAITLVFLAIVLGLGAMMTRLNRRE
Ga0074470_1052503773300005836Sediment (Intertidal)MFVKIMAKTEMWGFWQYMFDLCNESFPCVLGWLTAILVGFLGVLLGLVAMMSRLNKKNRSTDE*
Ga0074470_1065658523300005836Sediment (Intertidal)MFVKILAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVMGLGAIMTRLNNRRG*
Ga0074470_1075585913300005836Sediment (Intertidal)MFVKILAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVMGLGAMMTRLNNRRG*
Ga0074470_1094768523300005836Sediment (Intertidal)MFVKILAKTEMWGFWQYMFDLCNESFPCVLGWLTAILVGFLGILLGLVAMMSRLNNKRKT
Ga0073913_1008572923300005940SandMFVKTLAQTKMWGFWQYMFDFCNESFPCVLGLLTAIILVFLAIVLGLGAMMTHLNRRE*
Ga0073924_106383413300005992SandMFAKILAQNKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMMTHLNNRRG*
Ga0075023_10052793213300006041WatershedsMFIKILAQTQMWGFWQYMFDLCNEGFSCVLGWLAAILLAFLAIVVGLGVRMTRLNKK*
Ga0075432_1023362323300006058Populus RhizosphereMFAKILAQTKMWGFWQYMFDLCNESFPCVLGWLTAILFVFLAVLLGLIV
Ga0097621_10028014623300006237Miscanthus RhizosphereMFVKTLAQTKMWGFWQYMFDLCNESFSCVLGLLTATTLVFLAIVLGLGAMMTRLNRRE*
Ga0075425_10055458623300006854Populus RhizosphereMFVKTLAQTKMWGFWQYMFDLCNESFSCVLGSLTAITLVFLAIVLSLGAMMTRLNRRE*
Ga0075429_10118043213300006880Populus RhizosphereMFAKILAQTKMWGFWQYMFDLCNESFPCVLGWLTAILFVFLAVLLGLIVMMTRLKNRRG*
Ga0105106_1002039823300009078Freshwater SedimentMFVKTLAQTKMWGVWQYMFDFCNESFSCVLGSLTAIVLVFLAIVLGFGAMMTRLNRRE*
Ga0102851_1003740723300009091Freshwater WetlandsMFIKTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMMTRLNNRRG*
Ga0102851_1096057523300009091Freshwater WetlandsMFVKTLAQTKMWGFWQYMFDFCNESFFCVLGSLTAIVLVFLAIVLSFGAMMTRLNKRE*
Ga0115026_1037712023300009111WetlandMFVKTLAQTKMWGFWQYMFDFCNESFFCVLGSLTAIVLVFLAIVLGFGAMMTRLNKRE*
Ga0115027_1162855513300009131WetlandMFVNNLAQTKMWGFWQYMFDFCNESFFCVLGSLTAIVLVFLAIVLSFGAMMTRLNKRE*
Ga0113563_1002484033300009167Freshwater WetlandsMFVKTLAQTKMWGFWQYMFDFCNESFLCVLGSLTAIVLVFLAIVLGFGAMMTRLNKRE*
Ga0105164_1043466613300009777WastewaterDEDMMFVKTLAQTKMWGFWQYMFDFCNESFSCVLGSLTAIILVFLAIVLGLGTMMTRLNRRK*
Ga0105060_10398023300009798Groundwater SandMFVKTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMMTRLNRRE*
Ga0126384_1100059313300010046Tropical Forest SoilTKMLGFWQYMFDLCNEDFSCVLGSLTTMLLVFLAIVLGLGAMMTRLNNRRR*
Ga0134127_1330442023300010399Terrestrial SoilMFVKILAQTKMWGFWQYMFDLCNESFPCVLGWLTAILVVFLAVLLGLIVMMTRLKNRRE*
Ga0134121_1000211863300010401Terrestrial SoilMFIKILAQTQMWGFWQYMFDLCDEGFSCVLGWLAAILLAFLAIVVGLGARMTRLNKNRRV
Ga0134121_1244585723300010401Terrestrial SoilMMFIKILAQTQMWGLWQYMFDLCNEGFSCVLGWLAAILLAFLAIVVALGARMTRLNKNRRV*
Ga0134123_1003487343300010403Terrestrial SoilMFVKTLAQTKMWGFWQYMFDFCNEDFSCVLGSLTAILLFFLAIVFGLGAMMTRINNKRG*
Ga0157374_1169825613300013296Miscanthus RhizosphereMFVKALAQTKMWGFWQYMFDFCNESFSCVLGSLTAISLVFLANVLGLGAMMTRLNNRRG*
Ga0075302_111983023300014269Natural And Restored WetlandsMFGEILAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMMTHLNKRRE*
Ga0075347_112754423300014313Natural And Restored WetlandsMFVKTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAVVLGLGAMVTRLNRRE*
Ga0075351_101012023300014318Natural And Restored WetlandsMFVENLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAVVLGLGAMVTRLNNRRG*
Ga0075348_120616713300014319Natural And Restored WetlandsEERCQGGDTMFVLTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMVTRLNRRE*
Ga0157380_1004705243300014326Switchgrass RhizosphereMFVRTLAQTKMWGFWQYMFDLCNESFPCVLGSLTAIALGFLAIILGLGAMMTRLNRRE*
Ga0163144_1013342323300015360Freshwater Microbial MatMFVKTLAQTKMWGFWQYLFDFCNESFSCVLGSLTAIVLVFLAIVLGFGAMMMRLNKRE*
Ga0187773_1017196323300018064Tropical PeatlandMFGEILAQTKMWGFWQYMFDLCNEDFSCVLGSLTAVLLVFLAIVLGLGAMMTRLNNNRRG
Ga0190270_1333766613300018469SoilMFVKTLAQTKMWGFWQYLFDFCNESFSCVLGSLTAIVLVFLAIVLGFGAMMMRLNRRE
Ga0173482_1000718653300019361SoilMFVKALAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGAMMTHLNNRRGA
Ga0190264_1026909323300019377SoilMFVKTLAQTKMWGFWQYLFDFCNESFSCVLGSLTAIVLVFLAIVLGFGAMMMRLNKRE
Ga0193745_100789143300020059SoilMFVKTLAQTKMWGFWQYMSDLCNESFSCVLGSLTAITLVFLAIVLVLGTMMTRLNRRE
Ga0194035_1000028853300020167Anoxic Zone FreshwaterMFVKTLAQTKMWGFWQYMFDFCNESFSCVLGSLTAIILVFLAIVLGLGSMMTRLNRRE
Ga0210334_1094135923300021859EstuarineMFVKILTQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVMGLGAIMTRLNNRRG
Ga0212091_1005313333300022549GroundwaterMFVKTLAQTKMWGLWQYMFDLCNESFSCVLGSLAAIVLVFLATVLGLNAMMTRRNKRE
Ga0210083_100203623300025521Natural And Restored WetlandsMFVKNLAQTKMWGFWQYMFDLCNEDFSCVIGSLTAVLLVFLAIVLGLGAMMTRLNNRRG
Ga0207642_1034716923300025899Miscanthus RhizosphereMFVKTLAQTKMWGFWQYMFDFCNEDFSCVLGSLTAILLVFLAIVFGLGAMMTRINNKRG
Ga0207642_1114299223300025899Miscanthus RhizosphereMFVKTLAQTKMWGFWQYMFDLCNESFSCVLGLLTAIILAFLAIVFGLSAMMTRLNRRE
Ga0207685_1051286613300025905Corn, Switchgrass And Miscanthus RhizosphereAIGEGDIMFIKILAQTQMWGFWQYMFDLCDEGFSCVLGWLAAILLAFLAIVVGLGARMTRLNKNRRV
Ga0207660_1000808583300025917Corn RhizosphereMFVKTLAQTKMWGFWQYMFDFCHESFSCVLGSLTVIVLVFLAIVLGLGTMMTRLNRRE
Ga0207652_1146339513300025921Corn RhizosphereMFIKILAQTQMWGFWQYMFDLCDEGFSCVLGWLAAILLAFLAIVVGLGARMTRL
Ga0207704_1147115323300025938Miscanthus RhizosphereMFVKALAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGAM
Ga0207711_1001611753300025941Switchgrass RhizosphereMFVKALAHTKMWGFLQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGAMMTHLNNRRGA
Ga0210135_101490923300025954Natural And Restored WetlandsMFVENLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLALGAMMTHLNNRRG
Ga0210105_100904233300025966Natural And Restored WetlandsMFVKTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGAMMT
Ga0210102_103218813300025971Natural And Restored WetlandsMFVKTLAQTKMWGFWQYMFDFCNESFSCVLGSLTAIVLVFLAIVLGLGTMMTRLNRRRE
Ga0210078_102934813300025979Natural And Restored WetlandsMFVENLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAVVLGLGAMVTRLNNRRG
Ga0208418_101350113300026018Natural And Restored WetlandsEEKCQGGDTMFGEILAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMMTHLNKRRE
Ga0207708_1015470723300026075Corn, Switchgrass And Miscanthus RhizosphereMFVKTLAQTKMWGFWQYMFDFCHESFSCVLGSLTAIVLVFLAIVLGLGTMMTRLNRRE
Ga0207648_1188623823300026089Miscanthus RhizosphereMFVRTLAQTKMWGFWQYMFDLCNESFPCVLGSLTAIALGFLAIILGLG
Ga0209900_100751213300026888Groundwater SandMFVKTLAQTKMWGFWQYMFDLCNESFPCVLGSLTAITLGFLAIVLGLGAMMTRLNRRE
Ga0209867_100399033300027393SandMFVKTLAQTKMWGFWQYMFDFCNESFPCVLGLLTAIILVFLAIVLGLGAMMTHLNRRE
Ga0209867_102690313300027393SandMFAKILAQNKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMMTRLNNRRG
Ga0209466_108027113300027646Tropical Forest SoilMLVKTLAQTKMWGFWQYMFDFCNESFTCVLGSLTAIILVFLALVLGLGTMMTHLNRRE
Ga0209966_103823313300027695Arabidopsis Thaliana RhizosphereMFVKTLAQTKMWGFWQYMFDFCHESFSCVLGSLTVIVLVFLAIVLGLGT
Ga0209293_1051094213300027877WetlandMFIKTLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMMTRLNNRRG
Ga0209583_1007921023300027910WatershedsMFVKTLAQTKMWGFWQYMFDFCNESFSCVLGSLTAIILVFLAIVLGLGAMMTHLNRRE
Ga0209583_1064446113300027910WatershedsMFIKILAQTQMWGFWQYMFDLCNEGFSCVLGWLAAILLAFLAIVVGLGVRMTRLNKK
Ga0209069_1040573213300027915WatershedsMFAKTLAQTKMWGFWQYMFDLCNESFSCVLGLLTATTLVFLAIVLGLGAM
Ga0209705_1006832723300027979Freshwater SedimentMFVKTLAQTKMWGVWQYMFDFCNESFSCVLGSLTAIVLVFLAIVLGFGAMMTRLNRRE
Ga0307498_1001895943300031170SoilMFVKTLAQTKMWGFWQYMFDFCNESFSCVLGSLTAISLVFLAIVLGLGAMMTRLNNRRG
Ga0307505_1000831233300031455SoilMFVKTLAQTKMWGFWQYMFDFCNESFSCVLGWLTAILLVFLAIVLGLQAMMTRLNRRE
Ga0310887_1020695723300031547SoilMFVKALAQTKMWGFWQYMFDFCHESFSCVLGSLTVIVLVFLAIVLGLGTMMTRLNRRE
Ga0310907_1012775923300031847SoilMFVKTLAQTKMWGFWQYMFDLCNEDFSCVLGSLIAILLVFLAIVFGLGAMMTHLNNRRGA
Ga0310904_1001054523300031854SoilMFVKALAQTKMWGFWQYMFDLCNEDFSCVLGSLIAILLVFLAIVFGLGAMMTHLNNRRGA
Ga0310892_1021548623300031858SoilMFVKILAQTKMWGFWQYMFDLCNESFSCVLGLLTAIILAFLAIVLGLSAMMMRLNRRRE
Ga0310893_1006728423300031892SoilMFVKALAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGAMMTHLNN
Ga0310901_1003958713300031940SoilMFVKALAQTKMWGFWQYMFDFCHESFSCVLGSLTAIVLVFLAIVLGLG
Ga0310903_1002598243300032000SoilMFVKALAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGA
Ga0310897_1010724713300032003SoilGDTMFVKALAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVFGLGAMMTHLNNRRGAR
Ga0310897_1036246823300032003SoilMFVKTLAQTKMWGFWQYMFDFCHESFSCVLGSLTAIVLVFLAIVLGLGAMMTRLNRRE
Ga0310889_1011643713300032179SoilAQTKMWGFWQYMFDFCHESFSCVLGSLTAIVLVFLAIVLGLGAMMTRLNRRE
Ga0316619_1105113613300033414SoilLAQTKMWGFWQYMFDLCNEDFSCVLGSLTAILLVFLAIVLGLGAMMTRLNNRRG
Ga0370499_0000435_627_8033300034194Untreated Peat SoilMFVKTLAQTKMWGFWQYLFDFCNESFSCVLGSLTAIVLVFLAIVLSFGAMMMRLNKRE
Ga0370495_0001135_951_11273300034257Untreated Peat SoilMFVKTLAQTKMWGFWQYMFDLCNESFSCVLGLLTVIILAFLAIVLGLSAMMTRLNRRE
Ga0370495_0013307_1931_21073300034257Untreated Peat SoilMFVKTLAQTKMWGFWQYMFDFCNESFSCVLGSLTAIILVFLAIVLGLGAMMTRLNRRE
Ga0373948_0173382_129_3053300034817Rhizosphere SoilMFVKTLAQTKMWGFWQYMFDFCHESFSCVLGSLTVIVLVFLPIVLGLGTMMTRLNRRE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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