Metagenome Family F078857

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078857
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	130 residues
Representative Sequence	MLNLLATLVVSALPASPGAVSTCPDPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA
Number of Associated Samples	99
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.43 %
% of genes near scaffold ends (potentially truncated)	40.52 %
% of genes from short scaffolds (< 2000 bps)	81.90 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.586 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (38.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.034 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 6.21% β-sheet: 0.00% Coil/Unstructured: 93.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13462	Thioredoxin_4	43.97
PF00578	AhpC-TSA	2.59
PF07238	PilZ	0.86
PF07676	PD40	0.86
PF01323	DSBA	0.86
PF00793	DAHP_synth_1	0.86
PF00892	EamA	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.59 %
Unclassified	root	N/A	47.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.59 %
Unclassified	root	N/A	47.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.59 %
Unclassified	root	N/A	47.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	35.34 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	35.34 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	22.41 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	9.48 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.86 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.86 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.86 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.41 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	2.59 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.59 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.86 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.86 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.86 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.41 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	2.59 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.59 %
Paraburkholderia ginsengisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia ginsengisoli	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.86 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.86 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.41 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	2.59 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.59 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.86 %
unclassified Nocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia	0.86 %
Saccharopolyspora spinosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora spinosa	0.86 %
Paraburkholderia ginsengisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia ginsengisoli	0.86 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.41 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.41 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	2.59 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.59 %
Nocardia sp. BMG111209	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. BMG111209	0.86 %
Streptomyces sp. AA4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AA4	0.86 %
Saccharopolyspora spinosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora spinosa	0.86 %
Paraburkholderia ginsengisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia ginsengisoli	0.86 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004058\|Ga0055498_10012212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1149	Open in IMG/M
3300004081\|Ga0063454_101636844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AA4	557	Open in IMG/M
3300004114\|Ga0062593_101707935	Not Available	688	Open in IMG/M
3300004156\|Ga0062589_100348787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1174	Open in IMG/M
3300004463\|Ga0063356_103398681	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300004480\|Ga0062592_100137839	All Organisms → cellular organisms → Bacteria → Proteobacteria	1606	Open in IMG/M
3300004633\|Ga0066395_10001262	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	9077	Open in IMG/M
3300004643\|Ga0062591_102119654	Not Available	583	Open in IMG/M
3300005329\|Ga0070683_100050929	All Organisms → cellular organisms → Bacteria → Proteobacteria	3835	Open in IMG/M
3300005329\|Ga0070683_101544470	Not Available	638	Open in IMG/M
3300005329\|Ga0070683_101677209	Not Available	611	Open in IMG/M
3300005331\|Ga0070670_100077492	All Organisms → cellular organisms → Bacteria → Proteobacteria	2856	Open in IMG/M
3300005332\|Ga0066388_102785706	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005334\|Ga0068869_101287645	Not Available	644	Open in IMG/M
3300005338\|Ga0068868_100273493	Not Available	1428	Open in IMG/M
3300005338\|Ga0068868_100666651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	928	Open in IMG/M
3300005343\|Ga0070687_100028210	Not Available	2720	Open in IMG/M
3300005354\|Ga0070675_100618910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	983	Open in IMG/M
3300005364\|Ga0070673_100021579	All Organisms → cellular organisms → Bacteria	4672	Open in IMG/M
3300005365\|Ga0070688_100376947	Not Available	1045	Open in IMG/M
3300005367\|Ga0070667_101140665	Not Available	729	Open in IMG/M
3300005367\|Ga0070667_101943877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. BMG111209	554	Open in IMG/M
3300005438\|Ga0070701_10009988	All Organisms → cellular organisms → Bacteria	4181	Open in IMG/M
3300005440\|Ga0070705_100146995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1559	Open in IMG/M
3300005444\|Ga0070694_101777706	Not Available	525	Open in IMG/M
3300005466\|Ga0070685_10347797	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1013	Open in IMG/M
3300005544\|Ga0070686_100445347	Not Available	994	Open in IMG/M
3300005548\|Ga0070665_100759206	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005615\|Ga0070702_101048534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia ginsengisoli	648	Open in IMG/M
3300005618\|Ga0068864_101757132	Not Available	625	Open in IMG/M
3300005841\|Ga0068863_101290383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora spinosa	737	Open in IMG/M
3300006237\|Ga0097621_100788513	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	880	Open in IMG/M
3300006844\|Ga0075428_101042379	Not Available	865	Open in IMG/M
3300006881\|Ga0068865_100222936	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300009094\|Ga0111539_10117209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	3122	Open in IMG/M
3300009156\|Ga0111538_12737646	Not Available	618	Open in IMG/M
3300009156\|Ga0111538_13383729	Not Available	554	Open in IMG/M
3300009553\|Ga0105249_10998032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	906	Open in IMG/M
3300009609\|Ga0105347_1238770	Not Available	743	Open in IMG/M
3300011399\|Ga0137466_1032846	Not Available	748	Open in IMG/M
3300011403\|Ga0137313_1019638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1089	Open in IMG/M
3300011417\|Ga0137326_1004306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3530	Open in IMG/M
3300011420\|Ga0137314_1048433	Not Available	1029	Open in IMG/M
3300011437\|Ga0137429_1112111	Not Available	833	Open in IMG/M
3300011439\|Ga0137432_1048762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1273	Open in IMG/M
3300011440\|Ga0137433_1137361	Not Available	782	Open in IMG/M
3300012039\|Ga0137421_1182670	Not Available	618	Open in IMG/M
3300012231\|Ga0137465_1040710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1374	Open in IMG/M
3300012353\|Ga0137367_10014958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6160	Open in IMG/M
3300012469\|Ga0150984_109008992	Not Available	661	Open in IMG/M
3300012672\|Ga0137317_1015135	Not Available	695	Open in IMG/M
3300012891\|Ga0157305_10011556	Not Available	1424	Open in IMG/M
3300012900\|Ga0157292_10067174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1002	Open in IMG/M
3300012903\|Ga0157289_10077437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	905	Open in IMG/M
3300012905\|Ga0157296_10069608	Not Available	884	Open in IMG/M
3300012905\|Ga0157296_10231764	Not Available	609	Open in IMG/M
3300012912\|Ga0157306_10368918	Not Available	551	Open in IMG/M
3300012985\|Ga0164308_10166015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1649	Open in IMG/M
3300012986\|Ga0164304_11303764	Not Available	591	Open in IMG/M
3300012988\|Ga0164306_10275853	Not Available	1216	Open in IMG/M
3300012988\|Ga0164306_11921201	Not Available	515	Open in IMG/M
3300013102\|Ga0157371_10457691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300013306\|Ga0163162_12699129	Not Available	572	Open in IMG/M
3300015371\|Ga0132258_10038608	All Organisms → cellular organisms → Bacteria	10797	Open in IMG/M
3300015371\|Ga0132258_10039842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10644	Open in IMG/M
3300015371\|Ga0132258_11893954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1501	Open in IMG/M
3300015372\|Ga0132256_100211868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1989	Open in IMG/M
3300015372\|Ga0132256_103596959	Not Available	521	Open in IMG/M
3300018073\|Ga0184624_10185951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	924	Open in IMG/M
3300018081\|Ga0184625_10147036	Not Available	1231	Open in IMG/M
3300018083\|Ga0184628_10022245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3131	Open in IMG/M
3300018083\|Ga0184628_10079720	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1670	Open in IMG/M
3300018476\|Ga0190274_10912030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	947	Open in IMG/M
3300019361\|Ga0173482_10103805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1037	Open in IMG/M
3300019361\|Ga0173482_10183236	Not Available	844	Open in IMG/M
3300021082\|Ga0210380_10005274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5371	Open in IMG/M
3300022756\|Ga0222622_10337508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1047	Open in IMG/M
3300022756\|Ga0222622_10639239	Not Available	770	Open in IMG/M
3300023077\|Ga0247802_1040120	Not Available	717	Open in IMG/M
3300025271\|Ga0207666_1003193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2004	Open in IMG/M
3300025315\|Ga0207697_10565056	Not Available	500	Open in IMG/M
3300025901\|Ga0207688_10138801	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1430	Open in IMG/M
3300025919\|Ga0207657_10742123	Not Available	761	Open in IMG/M
3300025925\|Ga0207650_10284016	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1348	Open in IMG/M
3300025926\|Ga0207659_11011934	Not Available	715	Open in IMG/M
3300025930\|Ga0207701_10027484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	5395	Open in IMG/M
3300025930\|Ga0207701_10053338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3712	Open in IMG/M
3300025936\|Ga0207670_11167818	Not Available	651	Open in IMG/M
3300025938\|Ga0207704_10195849	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1474	Open in IMG/M
3300025944\|Ga0207661_10028018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	4310	Open in IMG/M
3300025944\|Ga0207661_11406130	Not Available	640	Open in IMG/M
3300025945\|Ga0207679_10536931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1048	Open in IMG/M
3300025960\|Ga0207651_10417984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1144	Open in IMG/M
3300026023\|Ga0207677_11217380	Not Available	690	Open in IMG/M
3300026088\|Ga0207641_11135290	Not Available	780	Open in IMG/M
3300026088\|Ga0207641_11474134	Not Available	682	Open in IMG/M
3300026089\|Ga0207648_11950360	Not Available	549	Open in IMG/M
3300026095\|Ga0207676_10502390	Not Available	1152	Open in IMG/M
3300026116\|Ga0207674_11258438	Not Available	709	Open in IMG/M
3300026118\|Ga0207675_100030581	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5016	Open in IMG/M
3300027874\|Ga0209465_10003034	All Organisms → cellular organisms → Bacteria	7314	Open in IMG/M
3300027907\|Ga0207428_10019835	All Organisms → cellular organisms → Bacteria → Proteobacteria	5727	Open in IMG/M
3300028379\|Ga0268266_10915354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	848	Open in IMG/M
3300028380\|Ga0268265_12550296	Not Available	517	Open in IMG/M
3300028768\|Ga0307280_10086475	Not Available	1027	Open in IMG/M
3300028802\|Ga0307503_10185472	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	973	Open in IMG/M
3300028819\|Ga0307296_10488940	Not Available	673	Open in IMG/M
3300031562\|Ga0310886_10270746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	959	Open in IMG/M
3300031847\|Ga0310907_10190541	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300031854\|Ga0310904_11085207	Not Available	573	Open in IMG/M
3300031908\|Ga0310900_10085063	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300031908\|Ga0310900_10103595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1832	Open in IMG/M
3300031940\|Ga0310901_10502889	Not Available	543	Open in IMG/M
3300032002\|Ga0307416_101557726	Not Available	766	Open in IMG/M
3300032012\|Ga0310902_10088231	Not Available	1628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.34%
Host-Associated	Host-Associated	39.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	43.97%
Plants	Host-Associated → Plants	39.66%
Aquatic	Environmental → Aquatic	16.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.97%
Sediment	Environmental → Aquatic → Sediment	14.66%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Marine	Environmental → Aquatic → Marine	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.59%
Loam	Environmental → Terrestrial → Soil → Loam	16.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	9.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.31%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300011399	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT842_2	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012672	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT266_2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055498_100122121	3300004058	Natural And Restored Wetlands	PRMLNLLATLVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCGARPTPAQISAPEAPPVALLALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0063454_1016368441	3300004081	Soil	MLNLLATLVVTVLPASPGAYSACPDPTPAAQVEAGECGQTAPLDLWYRMSRFAEPDPGSAGAGPARRAQTNHSAPSCDAPGAPAQVSSPSIPPAALFALPTLLPLHVPSHFDGDARDLPARAIAPPERPPRA*
Ga0062593_1017079351	3300004114	Soil	MLNLLATLVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0062589_1003487872	3300004156	Soil	MLNLLAILVVSVLPASPGAVSTCPDPTPATADLAFGECGEGATAPHVEDLWYRMSRFAETDPGGIGAGPTRRPQANRGAAASCDAPQIPAQISTPDLPPAALVALPTLLPLQGPTHFHGDARDLPARAIAPPERPPRA*
Ga0063356_1033986811	3300004463	Arabidopsis Thaliana Rhizosphere	MLNLLATLVVSALPASPGAVSTCPDPVPPMADVAVGECGEVAPLDLWYRMSRFADSEPGGAGGAPARRPQGNRGLAACDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0062592_1001378392	3300004480	Soil	MFNLLATLVVSALPAAPGAFSACPDPMPATADLGVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQANRGVASCDAPQAPAQLPAPQLPPVALFALPGLLPLHVPTHFDADARDLLARAIAPPERPPRA*
Ga0066395_100012625	3300004633	Tropical Forest Soil	MLNLLATLVVTALPASPGGLSACPDPTPPSADVAFGECGEVAPLDLWYRVSRFADADPGGVGAGPARRSQANRVASCDAPQTPAQVPSPQAPPAALFALPTLLDIQIPLRFEADAHALPARALAPPERPPRA*
Ga0062591_1021196541	3300004643	Soil	MLNLLATLVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFDGDARDL
Ga0070683_1000509292	3300005329	Corn Rhizosphere	MLNFLATLVFSALPASSAAVATCPDPAPAIADVAGECGEVAPLDLWYRMSRIAENEPGGVGAGPARRLQANRAITSCDAPQVPVQFSAPDVPPVALVALPTLLPLQGPTHFDGDARDLPARTIAPLERPPRA*
Ga0070683_1015444701	3300005329	Corn Rhizosphere	MLNLLAILVVSVLPASPGAVSTCPDPTPATADLAFGECGEGATAPHVEDLWYRMSRFAETDPGGIGAGPTRRPQANRGAAASCDAPQIPAQISTPDLPPAALVALPTLLPLQGPTHFDGGARDLPARAIAPPERPPRA*
Ga0070683_1016772091	3300005329	Corn Rhizosphere	MLNLLATLVVTALPATPGASSGAFSACPDPTPPAADECDAVAPLDLWYRMSRFADPEPGGAGAGPARRTQASRGVSCDAPTAPPQVSPPNVSPVALFALPTLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0070670_1000774924	3300005331	Switchgrass Rhizosphere	MLTLFATLLVSALPAQPGAYSACPDQTPETAEVGECGMAAPLDLWYRMSRFAEPEPGSAGAGPARRAQTNRGVPSCDAPQAPAQVSPPQLSPVALFALPTLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0066388_1027857062	3300005332	Tropical Forest Soil	PWAPPMLNLLATLVVSALPAPPAALSTCPDPTPATADVDIGECGEVAPVDLWYRMSRFADGEPGGAGAAPARRMQANRGVPACDTRQAPAQPPAPQAPPVALFALPALLPLQVPSHFDADAHALPARALAPPERPPRG*
Ga0068869_1012876451	3300005334	Miscanthus Rhizosphere	MLNLLATLVVSALPASPGAVSTCPAPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0068868_1002734933	3300005338	Miscanthus Rhizosphere	MLNFLATLVFSALPASSAAVATCPDPAPAIADVAGECGEVAPLDLWYRMSRIAENEPGGVGAGPARRVQPTRAITSCDAPQVPVQFSAPELPPVALVALPTLLPLQGPTHFDGDARD
Ga0068868_1006666511	3300005338	Miscanthus Rhizosphere	SQGGPRMLNLLATLVVSALPASPGAVSTCPDPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0070687_1000282101	3300005343	Switchgrass Rhizosphere	PRMLNLLATLVVSALPASPGAVSTCPDPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0070675_1006189101	3300005354	Miscanthus Rhizosphere	MLNLLATLVVTALPATPGAFSACPDPMPATADVGVGECEQVAPLDLWYRMSRFAEVDPGSAAGAPARRPQASRGAASCDAPQAPAQLPSTELPHVALFALPGLLPLHLPSHFDADARDLPARAIAPPERPPRA*
Ga0070673_1000215792	3300005364	Switchgrass Rhizosphere	MINLLATLLVTALPPQPGAFSACPDPTPPAAEVGECDVVAPLDLWYRMSRFADPEPSGVAAGPARRAQANQGASCDAPNTPAQLSPPSVPPVALFALPTLLPLHVPSHFDADARDLPARALAPPERPPRA*
Ga0070688_1003769471	3300005365	Switchgrass Rhizosphere	MLNLLATLVVSALPASPGAVSTCPDPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHIDGDARDLPARAIAPPDRPPRA*
Ga0070667_1011406652	3300005367	Switchgrass Rhizosphere	PRMLNLLATLVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0070667_1019438771	3300005367	Switchgrass Rhizosphere	PMINLLATLLVTALPPQPGAFSACPDPTPPAAEVGECDVVAPLDLWYRMSRFADPEPSGVAAGPARRAQANQGASCDAPNTPAQLSPPSVPPVALFALPTLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0070701_100099884	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MLNLLATLVVSALPASPGAVSTCPDPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0070705_1001469953	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLNLLATLVVSALPASPGAVSTCPAPVPPMADVAVGECGEVAPLDLWYRMSRFADSEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0070694_1017777061	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0070685_103477972	3300005466	Switchgrass Rhizosphere	PRMLNLLATLVVSALPASPGAVSTCPAPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0070686_1004453472	3300005544	Switchgrass Rhizosphere	MINLLATLLVTALPPQPGAFSACPDPTPPAAEVGECDVVAPLDLWYRMSRFADPEPSGVAAGPARRAQANHGASCDAPNTPAQLSPPSVPPVALFALPTLLPLHVPS
Ga0070693_1005771502	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MLNLLATLVVTALPASPGGLSACPDPTPASADVTFGECDEVAPLDLWYRVSRFADADPGAVGAGPARRGHANHELASCDAPRTPAQLPPPQAPPAALFALPTLLDLQIPLRFEADAHALPARALAPPERPPRA*
Ga0070665_1007592061	3300005548	Switchgrass Rhizosphere	MINLLATLLVTALPPQPGAFSACPDPTPPAAEVGECDVVAPLDLWYRMSRFADPEPSGVAAGPARRAQANHGASCDAPNTPAQLSPPSVPPVALFALPTLLPLHVPSHFDADARDLPARALAPPERPPRA*
Ga0070702_1010485341	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RPSRGSPRMLNLLAALVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0068864_1017571321	3300005618	Switchgrass Rhizosphere	MLNLLATLVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFDGDARDLPARAIAPPERPPRA*
Ga0068863_1012903831	3300005841	Switchgrass Rhizosphere	MLNFLATLVVSALPASSAAAATCPDPTPSTADVAFGECEAAPLDLWYRMSRFAESEPGSVGAGGGVGSTRRLQANRGITSCDAPQVPAQISAPNLPPVALVALPTLLPLSSPTHFDGDARDLPARAIAPPERPPRA*
Ga0097621_1007885132	3300006237	Miscanthus Rhizosphere	LVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0075428_1010423792	3300006844	Populus Rhizosphere	MLSLLATLVASTLPAAPGAFSACPDPMPATADVGAGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQADRGVASCDAPQAPAQLPSPQLPHVALFALPGLLPLQVPSHFDADARDLPARAIAPPERPPRA*
Ga0068865_1002229362	3300006881	Miscanthus Rhizosphere	MITLLATLLVTALPPQPGAFSACPDSTPPAAEVGECDVVAPLDLWYRMSRFADPEPSGVAAGPARRAQANQGASCDAPNTPAQLSPPSVPPVALFALPTLLPLHVPSHFDADARDLPARALAPPERPPRA*
Ga0111539_101172092	3300009094	Populus Rhizosphere	MLSLLATLVASTLPAAPGAFSACPDPMPATADVGAGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQANRGLASCDVPQAPAQLPSSELPHVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0111538_127376461	3300009156	Populus Rhizosphere	MLSLLAALVVSALPATPGAFSACPDPMPATADVGAGECEQVAPLDLWYRMSRFADVDPGSAAGAPARRPQANRGLASCDVPQAPAQVPSTELPHVALFALPGLLPLQVPSHFDADARDLPARAIAPPERPPRA*
Ga0111538_133837291	3300009156	Populus Rhizosphere	MLNLLAILAVSVLPASPGAVSTCPDPTPATADLAFGECGEGATAPHVEDLWYRMSRFAETDPGGIGAGPTRRPQANRGAAASCDAPQIPAQISTPDLPPAALVALPTLLPLQGPTHFHGDARDLPARAIAPPERPPRA*
Ga0105249_109980321	3300009553	Switchgrass Rhizosphere	APVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0105347_12387701	3300009609	Soil	MLSLLATLVVSALPATPGAFSACPDPTQAAADVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQAHRGVASCDAPQTPAQLPSPQLPHVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0137466_10328462	3300011399	Soil	ATLVVTALPATPGAFSACPDPMPATADVGVGACEQVAPLDLWYRMSRFADVDPGSAAGAPARRALASRGVASCDAPQAPAQRPSPELPHVALFALPGLLPLHLPSHFDADARDLPARAIAPPERPPRA*
Ga0137313_10196382	3300011403	Soil	MLNLLATLVVSALPATPGAFSACPDPTQAAADVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQAHRGVASCDAPQTPAQLPSPQLPHVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0137326_10043063	3300011417	Soil	MLNLLATLVVSALPATPGAFSACPDPTQAAADVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQAHRGVASCDAPQTPAQLPSPQLPHVALFALPGLLPLHVPSHFDGDARDLPARAIAPPERPPRA*
Ga0137314_10484332	3300011420	Soil	MLNLLATLVVFALPATPGAFSACADPTPATGDVGECEQVAPVDLWYRMSRFADVDPGSAAAAPARRPQANRGVASCDAPQAPAQLPSSELPYVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0137429_11121111	3300011437	Soil	MLSLLATLVVSALPAAPGAFSACPDPMPAAADVGVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQAHRGVASCDAPQTPAQLPSPQLPHVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0137432_10487621	3300011439	Soil	MLNLLATLVVFALPATPGAFSACADPTPATGDVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQAHRGVASCDAPQTPAQLPSPQLPHVALFALPGLLPLHVPSHFDGDARDLPARAIAPPERPPRA*
Ga0137433_11373611	3300011440	Soil	FALPATPGAFSACADPTPATGDVGECEQVAPVDLWYRMSRFADVDPGSAAAAPARRPQAHRGVASCDAPQTPAQLPSPQLPHVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0137421_11826701	3300012039	Soil	PTQAAADVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPRANRGVASCDAPQAPAQLPSSELPYVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0137465_10407102	3300012231	Soil	MLSLLATLVVSTLPAAPGAFSACPDPMPATADVGAGECEQVAPQDLWYRMSRFADVDPGSAAAAPARRPQANRGVASCDAPQAPARVPSSEPPHVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0137367_100149583	3300012353	Vadose Zone Soil	MLNFLATLVVSALPASSADAATCPDPTPATSEVAFGECEAAPLDLWYRMSRFAESEPGSIGAGSVGSTRRLQANRSITSCDAPQVPAQISAPNLPPVALVALPTLLPLSSPMHFDGDARDLLARAIAPPERPPRA*
Ga0150984_1090089922	3300012469	Avena Fatua Rhizosphere	SSAAAATCPDPTPATADVAFGECEAAPLDLWYRMSRFAEIDPGGIGAGSVGSVGSPRRLQANRSIASCDAPQVPAQISAPNLPPVALVALPTLLPLSSPMHFDGDARDLLARAIAPPERPPRA*
Ga0137317_10151351	3300012672	Soil	MLSLLATLVVSALPATPGAFSACPDPTQAAADVGAGECEPVAPQDLWYRMSRFADVDPGSAAAAPARRPQAHRGVASCDAPQTPAQLPSSELPHVALFALPGLLPLHVPSHFDGDARDLPARAIAPPERPPRA*
Ga0157305_100115563	3300012891	Soil	MLTLLATLVVSALPATPGAFSACPDLTPAAADVGVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQANRGLASCDVPQAPAQLPSSELPHVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0157292_100671741	3300012900	Soil	LPATLPATPGAFSACPDPAPPAADECDVGAPLDLWYRMSRFAEPEPSGAAAGPARRAQANRGVSCEAPTEPAQLTPPNVPPVALFALPTLLPLHVASHFDADARDLPARAIAPPERPPRA
Ga0157289_100774372	3300012903	Soil	MLNLLAILVVSVLPASPGAVSTCPDPTPATADLAFGECGEGATAPHVEDLWYRMSRFAETDPGGIGAGPTRRPQANRGAAASCDAPQIPAQISTPDLPPAALVALPTLLPLQGPTHFDGDARDLPARAIAPPERPPQT*
Ga0157296_100696082	3300012905	Soil	STPLRESSAAAFFPHSDSRNSTSFAYFSEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0157296_102317641	3300012905	Soil	MLNLLAILVVSVLPASPGAVSTCPDPTPATADLAFGECGEGATAPHVEDLWYRMSRFAETDPGGIGAGPTRRPQANRGAAASCDAPQIPAQISTPDLPPAALVALPTLLPLQGPTHFHGDARDLPARAIAP
Ga0157306_103689181	3300012912	Soil	MFNLLATLVVSALPAAPGAFSACPDPMPATADLGVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQANRGVASCDAPQVPAQLPVPQLPPVALFALHGLLPLHVPTHF
Ga0164308_101660151	3300012985	Soil	MLNLLATLVVTALPASSAAGATCPDPTPATADVAVGECGEAAPLDLWYRMSRFAESDPGGVGAGPARRLQANRGVTSCDAPQVPAQISAPDLPPVALVALPTLLPLQGARYFDGDARDLPARAIAPPERPPRA*
Ga0164304_113037641	3300012986	Soil	PTPATADVAFGECGEVVTAPEDLWYRMSRFAETDPGGIGAGPTRRLQANRGAAASCDARQIPAQIATPDLPPAALVALPTLLPLQGPTHFDGDARDLPARAIAPPERPPRA*
Ga0164306_102758532	3300012988	Soil	MLNFLATLVVSVLPASPGAVSTCPDPTPATADVAFGECGEVVTAPEDLWYRMSRSAETDPGGIGAGPTRRLQANRGAAASCDARQIPAQIATPDLPPAALVALPTLLPLQGPTHFDGDARDLPARAIAPPERPPRA*
Ga0164306_119212012	3300012988	Soil	MLNLLATLVVTALPASSAAGATCPDPTPATADVAVGECGEAAPLDLWYRMSRFAESDPGGVGAGPARRLQANRGVTSCDAPQVPAQISAPDLPPVALVALPTLLPLQGPRYFNGDARD
Ga0157371_104576911	3300013102	Corn Rhizosphere	LATLVVSALPASPGAVSTCPDPVPPMADVAVGECGEVALLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA*
Ga0163162_126991292	3300013306	Switchgrass Rhizosphere	MLNLLATLVVSALPASPGAVSTCPAPVPPMADVAVGECGEVAPLDLWYRMSRFADSEPGGAGGAPARRPQGNRGLASCDARPTLAQISAPQTPPVALIALPTLLPLHVP
Ga0132258_100386082	3300015371	Arabidopsis Rhizosphere	MLHLLATLVVYALPASPVAASTCPDPPPPVAEFGECDEAAPLDLWYRMSRFADAEPGGLAAGPSRRAQTHRSVSSCDAPPVPAQLSTPQAPPGALFALPGLLPLHLPSHFDADARDLPARALAPPDRPPRV*
Ga0132258_1003984216	3300015371	Arabidopsis Rhizosphere	MLNLLATLVVSALPASPGAVSTCPDPVPPMVDVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPQHFDGDARDLPARAIAPPDRPPRA*
Ga0132258_118939542	3300015371	Arabidopsis Rhizosphere	MLSLLATLVVSTLPASPAVSTCPDPVPPADVECSEVAPLDLWYRMSRFADSEPGGLAAGPARRAPANRNLDLSSCGAPQVPAQVSSPDAPTPVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRV*
Ga0132256_1002118682	3300015372	Arabidopsis Rhizosphere	MLNLLATLVVSALPASPGAVSTCPDPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGAAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPQHFDGDARDLPARAIAPPDRPPRA*
Ga0132256_1035969591	3300015372	Arabidopsis Rhizosphere	TALPAMPGAFSACPDPVPPAADECDVAAPLDLWYRMSRFADPEPSGAAAGPARRAHTRRIVSCDAPTAPAQMPPPNLPPVALFALPTLLPLHVPSHFDADARDLPARAIAPPERPPRA*
Ga0184624_101859512	3300018073	Groundwater Sediment	IPPSGGPRMLNLLATLVFSALPASSAAATCPDPTPATADVAFGECGESAPLDLWYRMSLFAESEPGGVGAGAGPARRLQANRSVTSCDAPQVPAQISAPDLPPVALVALPTLLPLQGPRYFDGDARDLPARAIAPPERPPRA
Ga0184625_101470361	3300018081	Groundwater Sediment	MLNLLATLVFSALPASSAAATCPDPTPATADVAFGECGESAPLDLWYRMSLFAESEPGGVGAGAGPARRLQANRSVTSCDAPQVPAQISAPDLPPVALVALPTLLPLQGPRYFDGDARDLPARAIAPPERPPRA
Ga0184628_100222454	3300018083	Groundwater Sediment	MFNLLATLVVSALPAMPGAFSACPDPMPATADLGVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQANRGGASCDAPQAPAQLPSPQLPHVALFALPGLLPLQVPTHFDADARDLPARAIAPPERPPRA
Ga0184628_100797202	3300018083	Groundwater Sediment	MLNLLATLVISALPAQPGAYSSCPDATPQTAQVEAGECGQAAPLDLWYRMSRFADPDPGSAGAGPARRAQANHGVPSCDAPSVPAQGSSPNIPPVALVALPTLIPLHVPSHFDADARDLPARSLAPPERPPRA
Ga0190274_109120302	3300018476	Soil	PPMLTLLATLVVTALPATLPATPGAFSACPDPAPPAADECDVGAPLDLWYRMSRFAEPEPSGAAAGPARRAQANRGVSCEAPTAPAQLTPPNVPPVALFALPTLLPLHVASHFDADARDLPARAIAPPERPPRA
Ga0173482_101038051	3300019361	Soil	MLNFLATLVVSVLPASPGAVSTCPAPTPATADLAFGECGEVATAPEDLWYRMSRFAETDPGGIGAGATRRPQANRGAAASCDAPQIPAQISTPDLPPAALVALPTLLPLQGPTHFHGDARDLPARAIAPPERPPRA
Ga0173482_101832361	3300019361	Soil	MLNLLATLVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA
Ga0210380_100052741	3300021082	Groundwater Sediment	MFNLLATLVVSALPAAPGAFSACPDPMPATADLGVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQANRGGASCDAPQAPAQLPSPQLPHVALFALPGLLPLQVPTHFDADARDLPARAIAPPERPPRA
Ga0222622_103375082	3300022756	Groundwater Sediment	MLNLLATLVVSALPASSAAAATCPDPTPATADVAFGECGESAPLDLWYRMSLFAESDPGGVGAGSVGPTRRPQANRSFTSCDAPQVPAQISAPDLPPVALVALPTLLPLQGPRYFDGDARDLPARAIAPPERPPRA
Ga0222622_106392392	3300022756	Groundwater Sediment	LLCAGAWSSLRGVFGIPPSGGPRMLNLLATLVFSALPASSAAATCPDPTPATADVAFGECGESAPLDLWYRMSLFAESEPGGVGAGAGPARRLQANRSVTSCDAPQVPAQISAPDLPPVALVALPTLLP
Ga0247802_10401201	3300023077	Soil	MLNLLAILVVSVLPASPGAVSTCPDPTPATADLAFGECGEGATAPHVEDLWYRMSRFAETDPGGIGAGPTRRPQANRGAAASCDAPQIPAQISTPDLPPAALVALPTLLPLQGPTHFHGDARDLPARAIAPPERPPRA
Ga0207666_10031932	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MLNLLATLVVSALPASPGAVSTCPDPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA
Ga0207697_105650561	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MLNLLATLVVSALPASPGAVSTCPAPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIA
Ga0207688_101388011	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	PSQGGPRMLNLLATLVVSALPASPGAVSTCPAPVPPMADVAVGECGEVAPLDLWYRMSRFADSEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA
Ga0207657_107421232	3300025919	Corn Rhizosphere	GGPRMLNLLATLVVSALPASPGAVSTCPAPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA
Ga0207650_102840162	3300025925	Switchgrass Rhizosphere	MLTLFATLLVSALPAQPGAYSACPDQTPETAEVGECGMAAPLDLWYRMSRFAEPEPGSAGAGPARRAQTNRGVPSCDAPQAPAQVSPPQLSPVALFALPTLLPLHVPSHFDADARDLPARAIAPPERPPRA
Ga0207659_110119342	3300025926	Miscanthus Rhizosphere	MLNLLATLVVTALPATPGAFSACPDPMPATADVGVGECEQVAPLDLWYRMSRFAEVDPGSAAGAPARRPQASRGAASCDAPQAPAQLPSTELPHVALFALPGLLPLHLPSHFDADARDLPARALAPPERPPRA
Ga0207701_100274845	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLNFLATLVVSALPASSGAVSTCPDPAPATADVAGECGEVAPLDLWYRMSRIAENEPGGVGAGPARRVQPTRAITSCDAPQVPVQFSAPELPPVALVALPALLPLQGPTHFDGDARDLPARALAPPERPPRA
Ga0207701_100533386	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MINLLATLLVTALPPQPGAFSACPDPTPPAAEVGECDVVAPLDLWYRMSRFADPEPSGVAAGPARRAQANQGASCDAPNTPAQLSPPSVPPVALFALPTLLPLHVPSHFDADARDLPARALAPPERPPRA
Ga0207670_111678181	3300025936	Switchgrass Rhizosphere	MLNLLATLVVSALPASPGAVSTCPAPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA
Ga0207704_101958492	3300025938	Miscanthus Rhizosphere	MITLLATLLVTALPPQPGAFSACPDSTPPAAEVGECDVVAPLDLWYRMSRFADPEPSGVAAGPARRAQANQGASCDAPNTPAQLSPPSVPPVALFALPTLLPLHVPSHFDADARDLPARALAPPERPPRA
Ga0207661_100280184	3300025944	Corn Rhizosphere	MLNFLATLVFSALPASSAAVATCPDPAPAIADVAGECGEVAPLDLWYRMSRIAENEPGGVGAGPARRLQANRAITSCDAPQVPVQFSAPDVPPVALVALPTLLPLQGPTHFDGDARDLPARTIAPLERPPRA
Ga0207661_114061302	3300025944	Corn Rhizosphere	MLNLLATLVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFD
Ga0207679_105369312	3300025945	Corn Rhizosphere	SPRMLNLLAILVVSVLPASPGAVSTCPDPTPATADLAFGECGEGATAPHVEDLWYRMSRFAETDPGGIGAGPTRRPQANRGAAASCDAPQIPAQISTPDLPPAALVALPTLLPLQGPTHFHGDARDLPARAIAPPERPPRA
Ga0207651_104179842	3300025960	Switchgrass Rhizosphere	MLNLLATLVVTALPATPGAFSACPDPMPATADVGVGECEQVAPLDLWYRMSRFAEVDPGSAAGAPARRPQASRGAASCDAPQAPAQLPSTELPHVALFALPGLLPLHLPSHFDADARDLPARAIAPPERPPRA
Ga0207677_112173802	3300026023	Miscanthus Rhizosphere	MLNFLATLVVSALPASSGAVSTCPDPAPATADVAGECGEVAPLDLWYRMSRIAENEPGGVGAGPARRVQPTRAITSCDAPQVPVQFSAPELPPVALVALPTLLPLQGPTHFDGDARDLPARALAPPERPPRA
Ga0207641_111352901	3300026088	Switchgrass Rhizosphere	MLNFLATLVVSVLPASPGAVSTCPDPTPATADVAFGECGEVVTAPEDLWYRMSRFAETDPGGIGAGPTRRLQANRGAAASCDARQIPAQIATPDLPPAALVALPTLLPLQGPTHFDGDA
Ga0207641_114741341	3300026088	Switchgrass Rhizosphere	MLNFLATLVVSALPASSAAAATCPDPTPSTADVAFGECEAAPLDLWYRMSRFAESEPGSVGAGGGVGSTRRLQANRGITSCDAPQVPAQISAPNLPPVALVALPTLLPLSSPTHFDGDARDLPARAIAPPERPPRA
Ga0207648_119503601	3300026089	Miscanthus Rhizosphere	MLNLLATLVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFDGDA
Ga0207676_105023902	3300026095	Switchgrass Rhizosphere	MLNLLATLVVSALPAAPGAVSTCPEPAPATADVAFGECGEVAPLDLWYRMSRFADGEPGGAAAGPARRPQTNRGVVSCDARPTPAQISAPEAPPVVLVALPTLLPLHVPRHFDGDARDLPARAIAPPERPPRA
Ga0207674_112584382	3300026116	Corn Rhizosphere	MFNLLATLVVSALPAAPGAFSACPDPMPATADLGVGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQANRGVASCDAPQAPAQLPAPQLPPVALFALPGLLPLHVPTHFDADARDLLARAIAPPERPPRA
Ga0207675_1000305811	3300026118	Switchgrass Rhizosphere	PRMLNLLATLVVSALPASPGAVSTCPDPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA
Ga0209465_100030343	3300027874	Tropical Forest Soil	MLNLLATLVVTALPASPGGLSACPDPTPPSADVAFGECGEVAPLDLWYRVSRFADADPGGVGAGPARRSQANRVASCDAPQTPAQVPSPQAPPAALFALPTLLDIQIPLRFEADAHALPARALAPPERPPRA
Ga0207428_100198352	3300027907	Populus Rhizosphere	MLSLLATLVASTLPAAPGAFSACPDPMPATADVGAGECEQVAPLDLWYRMSRFADVDPGSAAAAPARRPQANRGLASCDVPQAPAQLPSSELPHVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA
Ga0268266_109153542	3300028379	Switchgrass Rhizosphere	AFSACPDPTPPAAEVGECDVVAPLDLWYRMSRFADPEPSGVAAGPARRAQANHGASCDAPNTPAQLSPPSVPPVALFALPTLLPLHVPSHFDADARDLPARALAPPERPPRA
Ga0268265_125502961	3300028380	Switchgrass Rhizosphere	PPMINLLATLLVTALPPQPGAFSACPDPTPPAAEVGECDVVAPLDLWYRMSRFADPEPSGVAAGPARRAQANHGASCDAPNTPAQLSPPSVPPVALFALPTLLPLHVPSHFDADARDLPARALAPPERPPRA
Ga0307280_100864751	3300028768	Soil	MLNLLATLVFTALPASSAAAATCPDPTPTTADVAFGECGESAPLDLWYRMSLFAESEPGGVGAGPARRLQANRTVTSCDGPQVPAQISAPDLPPVALVALPTLLPLQ
Ga0307503_101854722	3300028802	Soil	LPAQPGGYSACPDLTPQTAQVEAGECGQAAPLDLWYRMSRFADPDPGSAGAGPARHAQVNHGVPSCDAPSLPSQGSSPNIPPVALVALPTLIPLHVPSHFDADARDLPARSLAPPERPPR
Ga0307296_104889401	3300028819	Soil	ELREDATELAHRAALLCAGAWSSLRGVFGIPPSGGPRMLNLLATLVISALPASSAAAATCPDPTPATADIAFGECGESAPLDLWYRMSLFAESDPGGVGAGPARRLQANRSVTSCDAPQVPAQISAPDLPPVALVALPTLLPLQGPRYFDGDARDLPARAIAPPERPPRA
Ga0310886_102707462	3300031562	Soil	LNLLATLVVSALPATPGAFSACPDPMPATAGVEVGECEQVAPLDLWYRMSRFADVDPGSAAGAPARRPQANRGLASCDVPQAPAQLPSTELPHVALFALPGLLPLHAPSHFDADARDLPARALAPPERPPRA
Ga0310907_101905411	3300031847	Soil	MLNLLATLVVSALPASPGAVSTCPDPVPPMVDVAVGECGEVAPLDLWYRMSRFAESEPGAAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPQHFDGDARDLP
Ga0310904_110852072	3300031854	Soil	PVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGAAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHFDGDARDLPARAIAPPDRPPRA
Ga0310900_100850632	3300031908	Soil	MLSFLAALVVSALPAAPGAFSACPDPTQAAADVGAGECEQVAPLDLWYRMSRFADVDPGSAAGAPARRPQANRGLASCDVPQAPAQLPSTELPHVALFALPGLLPLHVPSHFDADARDLPARAIAPPERPPRA
Ga0310900_101035952	3300031908	Soil	MLNLLATLVVSALPASPGAVSTCPDPVPPMVDVAVGECGEVAPLDLWYRMSRFAESEPGAAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPQHFDGDARDLPARAIAPPDRPPRA
Ga0310901_105028891	3300031940	Soil	FSPSQGGPRMLNLLATLVVSALPASPGAVSTCPDPVPPMVDVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPQHFDGDARDLPARAIAPPDRPPRA
Ga0307416_1015577262	3300032002	Rhizosphere	MLTLLATLVVTALPATPGAFSACPDPAPPAADECDVGAPLDLWYRMSRFAEPEPSGAAAGPARRAQANRGVSCEAPSAPAQLTPPNVSPPVALFALPTLLPLHVPTHFDADARDLPARAIAPPERPPRA
Ga0310902_100882311	3300032012	Soil	MLNLLATLVVSALPASPGAVSTCPAPVPPMADVAVGECGEVAPLDLWYRMSRFAESEPGGAGGAPARRPQGNRGLASCDARPTPAQISAPQTPPVALIALPTLLPLHVPRHIDGDARDLPARAIAPPDRPPRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078857

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences