Metagenome Family F078851

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078851
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	67 residues
Representative Sequence	YYAGETFFNGAPTPTSRTAGVALAGVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Number of Associated Samples	102
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.86 %
% of genes near scaffold ends (potentially truncated)	99.14 %
% of genes from short scaffolds (< 2000 bps)	96.55 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.276 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.931 % of family members)
Environment Ontology (ENVO)	Unclassified (46.552 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.034 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.44% β-sheet: 0.00% Coil/Unstructured: 50.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00817	IMS	1.72
PF12802	MarR_2	0.86
PF00501	AMP-binding	0.86
PF13358	DDE_3	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	1.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	97.41 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	96.55 %
Unclassified	root	N/A	1.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	68.97 %
Unclassified	root	N/A	1.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %

Name	Rank	Taxonomy	Distribution
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	45.69 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	2.59 %
Unclassified	root	N/A	1.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.86 %

Name	Rank	Taxonomy	Distribution
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	43.97 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	2.59 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	1.72 %
Unclassified	root	N/A	1.72 %
Oleomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Oleomonas	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Rhizobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter	43.97 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	2.59 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	1.72 %
Unclassified	root	N/A	1.72 %
Oleomonas cavernae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Oleomonas → Oleomonas cavernae	0.86 %

Name	Rank	Taxonomy	Distribution
Rhizobacter sp. Root404	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	43.97 %
Sphaerotilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	2.59 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	1.72 %
Unclassified	root	N/A	1.72 %
Oleomonas cavernae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Oleomonas → Oleomonas cavernae	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004480\|Ga0062592_102240604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	545	Open in IMG/M
3300005327\|Ga0070658_11382544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	611	Open in IMG/M
3300005333\|Ga0070677_10061768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1548	Open in IMG/M
3300005333\|Ga0070677_10157454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1062	Open in IMG/M
3300005333\|Ga0070677_10496686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	660	Open in IMG/M
3300005338\|Ga0068868_100758212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	872	Open in IMG/M
3300005344\|Ga0070661_100791555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	778	Open in IMG/M
3300005345\|Ga0070692_10500113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	787	Open in IMG/M
3300005345\|Ga0070692_11020835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	579	Open in IMG/M
3300005355\|Ga0070671_100255322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1489	Open in IMG/M
3300005356\|Ga0070674_100171504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1654	Open in IMG/M
3300005364\|Ga0070673_101138128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	730	Open in IMG/M
3300005444\|Ga0070694_101488709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	573	Open in IMG/M
3300005457\|Ga0070662_101667124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	550	Open in IMG/M
3300005459\|Ga0068867_100620251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	945	Open in IMG/M
3300005545\|Ga0070695_100190508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1459	Open in IMG/M
3300005547\|Ga0070693_101151628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	593	Open in IMG/M
3300005598\|Ga0066706_10846681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	717	Open in IMG/M
3300005616\|Ga0068852_100039901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	3956	Open in IMG/M
3300005834\|Ga0068851_10572530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	685	Open in IMG/M
3300005993\|Ga0080027_10142216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	918	Open in IMG/M
3300006237\|Ga0097621_101217511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	709	Open in IMG/M
3300006358\|Ga0068871_100348972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1308	Open in IMG/M
3300006804\|Ga0079221_11786030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	503	Open in IMG/M
3300006881\|Ga0068865_102116802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	512	Open in IMG/M
3300009093\|Ga0105240_10904760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	949	Open in IMG/M
3300009174\|Ga0105241_10285435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1411	Open in IMG/M
3300009176\|Ga0105242_10117058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2281	Open in IMG/M
3300009553\|Ga0105249_10937065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	934	Open in IMG/M
3300009649\|Ga0105855_1237536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Oleomonas → Oleomonas cavernae	559	Open in IMG/M
3300010400\|Ga0134122_11165562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	769	Open in IMG/M
3300010403\|Ga0134123_12384621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	594	Open in IMG/M
3300012046\|Ga0136634_10292653	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012500\|Ga0157314_1055616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	517	Open in IMG/M
3300012506\|Ga0157324_1045123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	554	Open in IMG/M
3300012680\|Ga0136612_10704301	Not Available	511	Open in IMG/M
3300012684\|Ga0136614_11114648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	539	Open in IMG/M
3300012883\|Ga0157281_1083472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	553	Open in IMG/M
3300012893\|Ga0157284_10272833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	543	Open in IMG/M
3300012907\|Ga0157283_10356787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	528	Open in IMG/M
3300012914\|Ga0157297_10046971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1113	Open in IMG/M
3300012951\|Ga0164300_11152340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	510	Open in IMG/M
3300012961\|Ga0164302_11685745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	531	Open in IMG/M
3300012984\|Ga0164309_11825630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	521	Open in IMG/M
3300014325\|Ga0163163_11387110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	764	Open in IMG/M
3300014325\|Ga0163163_11982310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	642	Open in IMG/M
3300014745\|Ga0157377_10839027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	681	Open in IMG/M
3300014968\|Ga0157379_11014552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	792	Open in IMG/M
3300015371\|Ga0132258_12644306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1253	Open in IMG/M
3300015373\|Ga0132257_104271171	Not Available	520	Open in IMG/M
3300016445\|Ga0182038_10588784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	959	Open in IMG/M
3300017792\|Ga0163161_11000666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	714	Open in IMG/M
3300017965\|Ga0190266_10174626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	997	Open in IMG/M
3300018476\|Ga0190274_10742559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1032	Open in IMG/M
3300018476\|Ga0190274_11170968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	851	Open in IMG/M
3300018482\|Ga0066669_12083795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	534	Open in IMG/M
3300019362\|Ga0173479_10856717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	509	Open in IMG/M
3300020034\|Ga0193753_10073452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1764	Open in IMG/M
3300020061\|Ga0193716_1186018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	802	Open in IMG/M
3300021445\|Ga0182009_10548367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	614	Open in IMG/M
3300023275\|Ga0247776_10344194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	550	Open in IMG/M
3300025321\|Ga0207656_10176876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1022	Open in IMG/M
3300025321\|Ga0207656_10413834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	679	Open in IMG/M
3300025474\|Ga0208479_1062525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	719	Open in IMG/M
3300025482\|Ga0208715_1044896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	812	Open in IMG/M
3300025893\|Ga0207682_10514276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	567	Open in IMG/M
3300025912\|Ga0207707_10350687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1272	Open in IMG/M
3300025918\|Ga0207662_11094227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	566	Open in IMG/M
3300025919\|Ga0207657_10418261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1054	Open in IMG/M
3300025920\|Ga0207649_10209491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1382	Open in IMG/M
3300025923\|Ga0207681_10496066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	999	Open in IMG/M
3300025923\|Ga0207681_11712203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	525	Open in IMG/M
3300025926\|Ga0207659_10703355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	865	Open in IMG/M
3300025937\|Ga0207669_11486982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	577	Open in IMG/M
3300025944\|Ga0207661_10038442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3750	Open in IMG/M
3300025944\|Ga0207661_10747021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	900	Open in IMG/M
3300025960\|Ga0207651_10723308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	878	Open in IMG/M
3300025960\|Ga0207651_12131754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	503	Open in IMG/M
3300025981\|Ga0207640_10520717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	994	Open in IMG/M
3300025986\|Ga0207658_10455383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1133	Open in IMG/M
3300026023\|Ga0207677_10309488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1308	Open in IMG/M
3300026023\|Ga0207677_11068665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	734	Open in IMG/M
3300026023\|Ga0207677_11484356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	626	Open in IMG/M
3300026041\|Ga0207639_10294381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1432	Open in IMG/M
3300026067\|Ga0207678_10516875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1042	Open in IMG/M
3300026078\|Ga0207702_10399038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1326	Open in IMG/M
3300026088\|Ga0207641_10598085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1079	Open in IMG/M
3300026116\|Ga0207674_10537938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1129	Open in IMG/M
3300026294\|Ga0209839_10263980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	536	Open in IMG/M
3300028380\|Ga0268265_12473002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	525	Open in IMG/M
3300028381\|Ga0268264_11170364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	778	Open in IMG/M
3300028587\|Ga0247828_10212889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1015	Open in IMG/M
3300028589\|Ga0247818_10643331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	732	Open in IMG/M
3300028596\|Ga0247821_10470489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	795	Open in IMG/M
3300028597\|Ga0247820_10346850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	982	Open in IMG/M
3300028889\|Ga0247827_10422020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	815	Open in IMG/M
3300028889\|Ga0247827_11019626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	563	Open in IMG/M
3300031226\|Ga0307497_10122527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1045	Open in IMG/M
3300031366\|Ga0307506_10426579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	548	Open in IMG/M
3300031640\|Ga0318555_10166980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1182	Open in IMG/M
3300031740\|Ga0307468_100539263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	936	Open in IMG/M
3300031793\|Ga0318548_10112390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1312	Open in IMG/M
3300031824\|Ga0307413_10577989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	916	Open in IMG/M
3300031858\|Ga0310892_10967589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	599	Open in IMG/M
3300031890\|Ga0306925_12279721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	501	Open in IMG/M
3300031938\|Ga0308175_101639653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	720	Open in IMG/M
3300031939\|Ga0308174_10018561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	4252	Open in IMG/M
3300031996\|Ga0308176_12660015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sphaerotilaceae	533	Open in IMG/M
3300031996\|Ga0308176_12970920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	502	Open in IMG/M
3300032002\|Ga0307416_100349074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1496	Open in IMG/M
3300032010\|Ga0318569_10562569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	531	Open in IMG/M
3300032043\|Ga0318556_10495592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	639	Open in IMG/M
3300032074\|Ga0308173_10513719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1074	Open in IMG/M
3300032074\|Ga0308173_11938670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	555	Open in IMG/M
3300034125\|Ga0370484_0213965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	529	Open in IMG/M
3300034268\|Ga0372943_0850480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.45%
Host-Associated	Host-Associated	46.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.86%
Plants	Host-Associated → Plants	46.55%
Aquatic	Environmental → Aquatic	2.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.97%
Roots	Host-Associated → Plants → Roots	3.45%
Freshwater	Environmental → Aquatic → Freshwater	2.59%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.24%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.24%
Loam	Environmental → Terrestrial → Soil → Loam	7.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.45%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.45%
Ice	Environmental → Aquatic → Freshwater → Ice	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.21%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.86%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.86%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062592_1022406042	3300004480	Soil	LVRRGWLLAAVAVIYYAGETFFNGTPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0070658_113825441	3300005327	Corn Rhizosphere	AYYNGAPTTTSRIAALVLVLLGFFGVYMLFCGVHGNRWLGDSLRRRGFTLVGEERR*
Ga0070677_100617682	3300005333	Miscanthus Rhizosphere	LKAIVRRTWLLAVIGLLLYVMTAFYNGAPSATSRTAALLLVLLGFYGVYMLFCGVNGNRWLGDSLRRRGFTLVGEERR*
Ga0070677_101574541	3300005333	Miscanthus Rhizosphere	ETFFNGAPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0070677_104966861	3300005333	Miscanthus Rhizosphere	AIVKRGWLLAAVAVIYYAGETFFNGTPTPTSRTAGVALAGVGFYAIYMLFCGVNGNRWLGDSLRRRGFTLIGEERR*
Ga0068868_1007582121	3300005338	Miscanthus Rhizosphere	WRAFFVGSMSAVIRRTWLLFVVAALYYASEAYFYGVPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0070661_1007915551	3300005344	Corn Rhizosphere	VAVIYYAGETFFNGAPTPTSRTAGVALAGVGFYAIYMLFCGVNGNRWLGDSLRRRGFTLIGEERR*
Ga0070692_105001132	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	PTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0070692_110208352	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	PTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERG*
Ga0070671_1002553221	3300005355	Switchgrass Rhizosphere	GALFYVITAFYNGAPTPTSRTAALFLVLLGFYGVYMLFCGVNGNRWLGDSLRRRGFMLVGEERR*
Ga0070674_1001715041	3300005356	Miscanthus Rhizosphere	SRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0070673_1011381282	3300005364	Switchgrass Rhizosphere	LAAVAVIYYAGETFFNGAPTPTSRTAGVALAGVAFYAIYMLFCGVNGNRWLGDSLRRRGFTLIGEERR*
Ga0070694_1014887091	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	WRAFFVGSMSAVIRRTWLLFVVAALYYASEAYFYGVPTPTSRTAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0070662_1016671242	3300005457	Corn Rhizosphere	GVPTPTSRTAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0068867_1006202512	3300005459	Miscanthus Rhizosphere	PTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0070695_1001905081	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AALYYASEAYFYGVPTPTSRTAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0070693_1011516282	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LAAVAVIYYAGETFFNGAPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0066706_108466811	3300005598	Soil	FYVITAFYNGAPTPTSRTAALFLVLLGFYGVYMLFCGVNGNRWLGDSLRRRGFMLVGEERK*
Ga0068852_1000399015	3300005616	Corn Rhizosphere	AGETFFNGTPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0068851_105725301	3300005834	Corn Rhizosphere	IIRRGWLLAAVAVIYYAGETFFNGAPTPTSRTAGVALAGVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERG*
Ga0080027_101422162	3300005993	Prmafrost Soil	FYSGAPTVTSRTAALMLVMLGFYAVYMLFCGVNGNRWLGDSLRRRGFTLIGEERR*
Ga0097621_1012175112	3300006237	Miscanthus Rhizosphere	SLSAIVRRTWLLAAVAFIYYMGETFYNGAPTATSRTFAVALAGLGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0068871_1003489722	3300006358	Miscanthus Rhizosphere	SAIVRRTWLLAAVAFIYYMGETFYNGAPTATSRTFAVALAGLGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0079221_117860301	3300006804	Agricultural Soil	TPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0068865_1021168022	3300006881	Miscanthus Rhizosphere	VRRTWLLAVIGLLLYVVTAFYNGAPTATSRTAALLLVLLGFYGVYMLFCGVNGNRWLGDSLRRRGFTLVGEERR*
Ga0105240_109047602	3300009093	Corn Rhizosphere	YYASEAYFYGVPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0105241_102854352	3300009174	Corn Rhizosphere	WLLFVVAALYYASEAYFYGVPTPTSRTAGVALAGVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0105242_101170583	3300009176	Miscanthus Rhizosphere	AIYYAGETFFNGAPTPTSRTAGVALAGVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERG*
Ga0105249_109370651	3300009553	Switchgrass Rhizosphere	TPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTMIGEERR*
Ga0105855_12375362	3300009649	Permafrost Soil	VSSRTAALLLVVLGFYAVYMLFCGVNGNRWLGDSLRRRGFTLVGEERR*
Ga0134122_111655622	3300010400	Terrestrial Soil	VGSLSTLIRRGWLLAAVAVIYYAGETFFNGAPTPTSRTAGVALAGVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0134123_123846211	3300010403	Terrestrial Soil	IVRRTWLLAAIGLLVYLMTAFYNGAPTATSRTAALLLVLLGFYGVYMLFCGVNGNRWLGDSLRRRGFTLVGEERR*
Ga0136634_102926532	3300012046	Polar Desert Sand	FFIDSLRAIVRRTWVLGAVALIFYVSFAFFDGAPTASSRTAAFAFALLGLYAAYMFFCGVNGARWLSDSLRRRGFILIGEERG*
Ga0157314_10556161	3300012500	Arabidopsis Rhizosphere	FVGSLSAVIRRTWLLFVVAALYYASEAYFYGVPTPTSRTAGVVLAAIGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0157324_10451232	3300012506	Arabidopsis Rhizosphere	WQAFFVGSLSTLVRRGWLLAAVAVIYYAGETFFNGAPTPTSRTAGVALAGLGFYAVYMLFCGVNGNRWLGDSLRRRGFTLIGEERR*
Ga0136612_107043011	3300012680	Polar Desert Sand	VWLLLAVACLFLLSEAYSSGAPTPTSRTAALALLLLGLYAAYMLFCGVHGNRWLGDSLRRRGFVLIGEERR*
Ga0136614_111146481	3300012684	Polar Desert Sand	GSLTAIVRRVWLLLAVACLFLLSEAYSSGAPTPTSRTAALALVLLGLYAAYMLFCGVHGNRWLADSLRRRGFTLIGEESR*
Ga0157281_10834722	3300012883	Soil	YYAGETFFNGAPTPTSRTAGVALAGVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0157284_102728332	3300012893	Soil	LLLYVVTAFYNGAPTATSRTAALLLVLLGFYGVYMLFCGVNGNRWLGDSLRRRGFTLVGEERR*
Ga0157283_103567871	3300012907	Soil	IVKRGWLLAAVAVIYYAGEIFFNGAPTPTSRTAGVALAGVAFYAIYMLFCGVNGNRWLGDSLRRRGFTLVGEERR*
Ga0157297_100469712	3300012914	Soil	VAGLYYAGETFYNGAPTLTTRTFGVALAALAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0164300_111523402	3300012951	Soil	TSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0164302_116857452	3300012961	Soil	ETFFNGTPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0164309_118256301	3300012984	Soil	WLLFVVAALYYASEAYFYGVPTPTSRTAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRQNFTLIGEERR*
Ga0163163_113871101	3300014325	Switchgrass Rhizosphere	YLMAAFYGGAPAATSRIAALLLVLLTFYAAYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0163163_119823102	3300014325	Switchgrass Rhizosphere	FFNGTPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0157377_108390271	3300014745	Miscanthus Rhizosphere	AAVAVIYYAGETFFNGTPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0157379_110145521	3300014968	Switchgrass Rhizosphere	LAAVAVIYYAGETFFNGAPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERG*
Ga0132258_126443061	3300015371	Arabidopsis Rhizosphere	NGAPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0132257_1042711712	3300015373	Arabidopsis Rhizosphere	SAIVRRTWLLVAVAGLYYAGETFYNGAPTLTTRTFGVALAALAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR*
Ga0182038_105887841	3300016445	Soil	VAALYYASEAYFYGVPTPTSRIAGVALAALGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0163161_110006661	3300017792	Switchgrass Rhizosphere	TPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0190266_101746261	3300017965	Soil	APTPTSRTAGVALAGVGFYAIYMLFCGVNGNRWLGDSLRRRGFTLVGEEPR
Ga0190274_107425592	3300018476	Soil	LYFAGETFYNGAPTPTSRTFGVALAGLAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0190274_111709681	3300018476	Soil	ETFFNGAPTPTSRTAGVALAGVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0066669_120837952	3300018482	Grasslands Soil	GWLLAAVVVVYYAGETFFNGAPTPTSRTAGVALAGVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0173479_108567171	3300019362	Soil	MLVVIGLLLYVVTAFYNGAPTATSRTAALLLVLLGFYGVYMLFCGVNGNRWLGDSLRRRGFTLVGEERR
Ga0193753_100734521	3300020034	Soil	GVLFYVVSAFYSGAPTATSRTAALLLVLLVFYAVYMLFCGVNGNRWLGDSLRRRGFTLVGEEQR
Ga0193716_11860182	3300020061	Soil	YFNGVPTPTSRTAAVALAGLGFYAVYMLFCGVNGNRWLGDSLRRRGFTLIGEERR
Ga0182009_105483672	3300021445	Soil	VAALIYVITAFYNGAPTPTSRTAALFLVLLAFYAVYMLFCGVNGNRWLGDSLRRRGFMLVGEERR
Ga0247776_103441942	3300023275	Plant Litter	ALVRRTWMLAAVAALFFAISAFHAEAPTGTSRTAALSLALLGLCAVFMLFCGVNGNRWLCHSLHRRGFTLVGEERR
Ga0207656_101768761	3300025321	Corn Rhizosphere	VGSLRAIVRRTWLVAVVGALFYVITAFYNGAPTPTSRTAALFLVLLGFYAAYMLFCGVNGNRWLGDSLRRRGFMLVGEERR
Ga0207656_104138341	3300025321	Corn Rhizosphere	AVAAIYYAGETFFNGAPTPTSRTAGVALAGVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERG
Ga0208479_10625252	3300025474	Arctic Peat Soil	ASSRTEAFLLVMLAFYAIYMLFCGVNGNRWLSESLRRRGFTVVGEERR
Ga0208715_10448962	3300025482	Arctic Peat Soil	LALAVVGGLAYVGWTFYNGAPTVSSRTDALVLVLLGFYAVYMLFCGVNGNRWLIDSLRRRGFTMVGEERR
Ga0207682_105142762	3300025893	Miscanthus Rhizosphere	KSIVRGTWLLAAIGLVVYLVTAYYNGAPTTTSRIAALVLVLLGFFGVYMLFCGVHGNRWLGDSLRRRGFTLVGEERR
Ga0207707_103506872	3300025912	Corn Rhizosphere	GWLLAAVAVIYYAGETFFNGTPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207662_110942272	3300025918	Switchgrass Rhizosphere	YFYGVPTPTSRTAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207657_104182611	3300025919	Corn Rhizosphere	AVIRRTWLLFVVAALYYASEAYFYGVPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207649_102094912	3300025920	Corn Rhizosphere	SLSTLVRRGWLLAAVAVIYYAGETFFNGAPTPTSRTAGVALAGVGFYAIYMLFCGVNGNRWLGDSLRRRGFTLIGEERR
Ga0207681_104960661	3300025923	Switchgrass Rhizosphere	YYNGAPTTTSRIAALLLVLLGFFGVYMLFCGVNGNRWLGDSLRRRGFTLVGEERR
Ga0207681_117122032	3300025923	Switchgrass Rhizosphere	NGTPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207659_107033551	3300025926	Miscanthus Rhizosphere	ETFFNGAPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207669_114869821	3300025937	Miscanthus Rhizosphere	LKAIVRRTWLLAVIGLPVYLITAYYNGAPTTTSRIAALVLVLLGFFGVYMLFCGVHGNRWLGDSLRRRGFTLVGEERR
Ga0207661_100384421	3300025944	Corn Rhizosphere	GSLSAVIRRTWLLFVVAALYYASEAYFYGVPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207661_107470211	3300025944	Corn Rhizosphere	VIRRTWLLFVVAALYYASEAYFYGVPTPTSRTAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207651_107233082	3300025960	Switchgrass Rhizosphere	QAFFVGSLSAIVRRTWLLAAVAFIYYMGETFYNGAPTATSRTFAVALAGLGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207651_121317542	3300025960	Switchgrass Rhizosphere	LSAIVKRGWLLAAVAVIYYAGETFFNGAPTPTSRTAGVALAGVAFYAIYMLFCGVNGNRWLGDSLRRRGFTLIGEERR
Ga0207640_105207172	3300025981	Corn Rhizosphere	IYYAGETFFNGTPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207658_104553831	3300025986	Switchgrass Rhizosphere	AIVKRGWLLAAVAVIYYAGETFFNGAPTPTSRTAGVALAGVAFYAIYMLFCGVNGNRWLGDSLRRRGFTLIGEERR
Ga0207677_103094882	3300026023	Miscanthus Rhizosphere	LAAVAVIYYAGETFFNGAPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207677_110686651	3300026023	Miscanthus Rhizosphere	GSLSAIVRRTWLLAAVAFIYYMGETFYNGAPTATSRTFAVALAGLGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207677_114843561	3300026023	Miscanthus Rhizosphere	FVGSLSAIVRRTWLLAAVAFIYYMGETFYNGAPTATSRTFAVALAGLGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207639_102943812	3300026041	Corn Rhizosphere	ASEAYFYGVPTPTSRTAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207678_105168751	3300026067	Corn Rhizosphere	AVAVIYYAGETFFNGTPTPTSRTAGVALAGVAFYAIYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207702_103990382	3300026078	Corn Rhizosphere	SEAYFYGVPTPTSRTAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207641_105980852	3300026088	Switchgrass Rhizosphere	YASEAYFYGVPTPTSRTAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0207674_105379381	3300026116	Corn Rhizosphere	LYYASEAYFYGVPTPTSRTAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0209839_102639802	3300026294	Soil	TSRTAAVALAGLGFYAVYMLFCGVNGNRWLGDSLRRRGFTLIGEERR
Ga0268265_124730021	3300028380	Switchgrass Rhizosphere	GVPTATSRTAALLLVLLGFYGVYMLFCGVNGNRWLGDSLRRRGFTLVGEERR
Ga0268264_111703641	3300028381	Switchgrass Rhizosphere	SAVVRRTWLLFTAVALYYASDVYFNGAATPTSRTAGVALAALGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0247828_102128891	3300028587	Soil	TLVRRGWLLAAVAVIYYAGETFFNGAPTPTSRTAGVALAGVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0247818_106433311	3300028589	Soil	AVIYYAGETFFNGTPTPTSRTAGVALAAVAFHAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0247821_104704891	3300028596	Soil	STLVRRGWLLAAVAAIYYAGETFFNGAPTPTSRTAGVALAGVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERG
Ga0247820_103468502	3300028597	Soil	NGAPTTTSRIAALLLVLLGFFGVYMLFCGVNGNRWLGDSLRRRGFTLVGEERR
Ga0247827_104220202	3300028889	Soil	LSTIIRRGWLLAAVAVIYYAGETFFNGTPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0247827_110196262	3300028889	Soil	VAVIYYAGETFFNGAPTPTSRTAGVALAAVAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0307497_101225272	3300031226	Soil	TLVRRGWLLAAVAVIYYAGETFFNGAPTPTSRTAGVALAGVGFYAVYMLFCGINGNRWLSDSLRRRGFTLIGEERH
Ga0307506_104265791	3300031366	Soil	FYNGAPTPTSRTLGVALAGLAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0318555_101669802	3300031640	Soil	FVGSLSAMIRRTWLLFVVAALYYASEAYFYGVPTPTSRIAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0307468_1005392632	3300031740	Hardwood Forest Soil	GVNGVPTLTSRTAGVALAGLAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0318548_101123902	3300031793	Soil	FVGSMAAMIRRTWLLFVVAALYYASEAYFYGVPTPTSRIAGVALAALGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0307413_105779891	3300031824	Rhizosphere	ASEAYFNGVPTPTSRTAGVALAGVGFYAVYMLFCGVHGNRWLSDSLRRRGFTLIGEERR
Ga0310892_109675891	3300031858	Soil	NGAPTTTSRIAALLLVLLGFFGVYMLFCGVNGNRWLGDSLRRRGFSLVGEERR
Ga0306925_122797211	3300031890	Soil	WRAFFVGSMSAMIRRTWLLFVVAALYYASEAYFYGVPTPTSRIAGVALAALGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0308175_1016396532	3300031938	Soil	FAVAALYYAGETYFNGAPTATSRTAGVALAGLAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0308174_100185611	3300031939	Soil	FFVGSLSALVKRGWLLAVVAAIYSAGETFFNGAPTPTSRTAGVALAGVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0308176_126600151	3300031996	Soil	QAFFVGSLSTLVRRGWLLAAVAVVYYAGETFFNGAPTPTSRTAGVALAGLGFYAVYMLFCGVNGNRWLSESLRRRGFTLVGEERR
Ga0308176_129709201	3300031996	Soil	WQAFFVGSLSAVIRRTWLLFAVAALYYASEAYFNGVPTPTSRTAGVALAGLAFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0307416_1003490742	3300032002	Rhizosphere	FNGVPTPTSRTAGVALAGVGFYAVYMLFCGVHGNRWLSDSLRRRGFTLIGEERR
Ga0318569_105625692	3300032010	Soil	MIRRTWLLFVVAALYYASEAYFYGVPTPTSRIAGVALAAVGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0318556_104955921	3300032043	Soil	IRRTWLLFVVAALYYASEAYFYGVPTPTSRIAGVALAALGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0308173_105137192	3300032074	Soil	YYAGETFYSGPPTPTSRTAGVALAGLGFYAVYMLFCGVNGNRWLSDSLRRRGFTLIGEER
Ga0308173_119386702	3300032074	Soil	TSRTAGVALAGVGFYAIYMLFCGVNGNRWLSDSLRRRGFTLIGEERR
Ga0370484_0213965_1_249	3300034125	Untreated Peat Soil	FVGSLKAIVRRTWLLCLVAVLFYFSWSYYGGAPTASSRSAALALVLLSFYGVYMLFCGVNGSRWLSDSLRRRGFTLVGEERR
Ga0372943_0850480_422_604	3300034268	Soil	YASEAYFSGAPTPTSRTAGVALAALAFYAVYMLFCGVNGNRWLSDSLRRRGFKLIGEEQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078851

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences