Metagenome / Metatranscriptome Family F078844

Basic Information
Family ID	F078844
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	40 residues
Representative Sequence	MGKKDAKVRMSLQTLRVLEAFLENPTEQLSGADVHQRCRIA
Number of Associated Samples	105
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.72 %
% of genes near scaffold ends (potentially truncated)	98.28 %
% of genes from short scaffolds (< 2000 bps)	93.10 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Bacteria (76.724 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.517 % of family members)
Environment Ontology (ENVO)	Unclassified (18.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.931 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.99% β-sheet: 0.00% Coil/Unstructured: 71.01%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02472	ExbD	18.10
PF00583	Acetyltransf_1	4.31
PF01464	SLT	4.31
PF00072	Response_reg	3.45
PF04972	BON	1.72
PF11295	DUF3096	1.72
PF04389	Peptidase_M28	1.72
PF00248	Aldo_ket_red	1.72
PF01545	Cation_efflux	1.72
PF12840	HTH_20	0.86
PF00005	ABC_tran	0.86
PF02518	HATPase_c	0.86
PF01625	PMSR	0.86
PF10282	Lactonase	0.86
PF02824	TGS	0.86
PF01381	HTH_3	0.86
PF00436	SSB	0.86
PF02798	GST_N	0.86
PF01850	PIN	0.86
PF13781	DoxX_3	0.86
PF13417	GST_N_3	0.86
PF00487	FA_desaturase	0.86
PF08240	ADH_N	0.86
PF13601	HTH_34	0.86
PF08734	GYD	0.86
PF09926	DUF2158	0.86
PF00733	Asn_synthase	0.86
PF00326	Peptidase_S9	0.86
PF02653	BPD_transp_2	0.86
PF13411	MerR_1	0.86
PF02424	ApbE	0.86
PF00106	adh_short	0.86
PF14321	DUF4382	0.86
PF00989	PAS	0.86
PF13662	Toprim_4	0.86
PF00188	CAP	0.86
PF04984	Phage_sheath_1	0.86
PF01177	Asp_Glu_race	0.86
PF01641	SelR	0.86
PF01739	CheR	0.86
PF13602	ADH_zinc_N_2	0.86
PF05163	DinB	0.86
PF00383	dCMP_cyt_deam_1	0.86
PF00892	EamA	0.86
PF03060	NMO	0.86
PF06127	Mpo1-like	0.86
PF07715	Plug	0.86
PF02826	2-Hacid_dh_C	0.86
PF02368	Big_2	0.86
PF08327	AHSA1	0.86
PF00378	ECH_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	18.10
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	1.72
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	1.72
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.72
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	1.72
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.86
COG4539	2-hydroxy fatty acid dioxygenase MPO1 (alpha-oxidation of fatty acids)	Lipid transport and metabolism [I]	0.86
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.86
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.86
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.86
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.86
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.86
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.86
COG1477	FAD:protein FMN transferase ApbE	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.86
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.86
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.86
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.72 %
Unclassified	root	N/A	23.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.72 %
Unclassified	root	N/A	23.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.72 %
Unclassified	root	N/A	23.28 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.79 %
Unclassified	root	N/A	23.28 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.45 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.28 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.72 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	0.86 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.86 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.86 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.28 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	6.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	0.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.28 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.90 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.72 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.86 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	0.86 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.86 %
Spirochaetaceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.28 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.72 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.86 %
unclassified Holophagaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → unclassified Holophagaceae	0.86 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.86 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.86 %
unclassified Spirochaetaceae	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → unclassified Spirochaetaceae	0.86 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.28 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.72 %
Holophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → unclassified Holophagaceae → Holophagaceae bacterium	0.86 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.86 %
Spirochaetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → unclassified Spirochaetaceae → Spirochaetaceae bacterium	0.86 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.86 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.86 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.28 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.72 %
Bosea sp. 12-68-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. 12-68-7	0.86 %
Holophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → unclassified Holophagaceae → Holophagaceae bacterium	0.86 %
Spirochaetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → unclassified Spirochaetaceae → Spirochaetaceae bacterium	0.86 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.86 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.86 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101546096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	560	Open in IMG/M
3300004082\|Ga0062384_100404040	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300004635\|Ga0062388_102598753	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005535\|Ga0070684_100745137	Not Available	914	Open in IMG/M
3300005538\|Ga0070731_10341054	Not Available	995	Open in IMG/M
3300005538\|Ga0070731_10993771	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005563\|Ga0068855_100504399	Not Available	1314	Open in IMG/M
3300005610\|Ga0070763_10108945	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300005993\|Ga0080027_10356640	Not Available	586	Open in IMG/M
3300006041\|Ga0075023_100262050	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300006050\|Ga0075028_100103933	All Organisms → cellular organisms → Bacteria → Proteobacteria	1453	Open in IMG/M
3300006050\|Ga0075028_100429647	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300006086\|Ga0075019_11128109	Not Available	510	Open in IMG/M
3300006162\|Ga0075030_100998607	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006162\|Ga0075030_101097875	Not Available	626	Open in IMG/M
3300006237\|Ga0097621_102212081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	526	Open in IMG/M
3300009633\|Ga0116129_1001238	All Organisms → cellular organisms → Bacteria → Proteobacteria	14342	Open in IMG/M
3300009787\|Ga0116226_11111113	Not Available	754	Open in IMG/M
3300009826\|Ga0123355_12067100	Not Available	525	Open in IMG/M
3300010341\|Ga0074045_10392900	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300010343\|Ga0074044_10237655	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300010343\|Ga0074044_11009351	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300010358\|Ga0126370_10536477	All Organisms → cellular organisms → Bacteria → Proteobacteria	996	Open in IMG/M
3300010371\|Ga0134125_12578066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	553	Open in IMG/M
3300010375\|Ga0105239_11201739	Not Available	874	Open in IMG/M
3300010880\|Ga0126350_12252303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	635	Open in IMG/M
3300012361\|Ga0137360_10811573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	805	Open in IMG/M
3300012582\|Ga0137358_10720133	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300012685\|Ga0137397_10337154	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300012918\|Ga0137396_10632139	All Organisms → cellular organisms → Bacteria → Proteobacteria	791	Open in IMG/M
3300012922\|Ga0137394_10341423	Not Available	1278	Open in IMG/M
3300012924\|Ga0137413_10032743	All Organisms → cellular organisms → Bacteria → Proteobacteria	2871	Open in IMG/M
3300012927\|Ga0137416_10908679	All Organisms → cellular organisms → Bacteria → Proteobacteria	783	Open in IMG/M
3300012929\|Ga0137404_12014691	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300014657\|Ga0181522_10542703	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300014658\|Ga0181519_10556346	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300014969\|Ga0157376_11544279	Not Available	697	Open in IMG/M
3300015245\|Ga0137409_10293074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1432	Open in IMG/M
3300017959\|Ga0187779_10789324	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300018044\|Ga0187890_10484641	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300018085\|Ga0187772_11435976	Not Available	513	Open in IMG/M
3300020580\|Ga0210403_10060558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3032	Open in IMG/M
3300020581\|Ga0210399_10395473	Not Available	1153	Open in IMG/M
3300021180\|Ga0210396_11475845	Not Available	560	Open in IMG/M
3300021181\|Ga0210388_10978969	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300021361\|Ga0213872_10314878	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300021362\|Ga0213882_10343996	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300021404\|Ga0210389_10943012	Not Available	671	Open in IMG/M
3300021406\|Ga0210386_11175518	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300021420\|Ga0210394_10392290	All Organisms → cellular organisms → Bacteria → Proteobacteria	1221	Open in IMG/M
3300021433\|Ga0210391_11248575	Not Available	574	Open in IMG/M
3300021559\|Ga0210409_10270378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1536	Open in IMG/M
3300023101\|Ga0224557_1300205	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300023270\|Ga0247784_1002402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4825	Open in IMG/M
3300025463\|Ga0208193_1009177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3147	Open in IMG/M
3300025905\|Ga0207685_10474411	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300025910\|Ga0207684_10884787	Not Available	751	Open in IMG/M
3300025914\|Ga0207671_10756531	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300025914\|Ga0207671_11451717	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300025928\|Ga0207700_10423778	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300025928\|Ga0207700_10803048	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300025929\|Ga0207664_10366715	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300026215\|Ga0209849_1089602	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300026555\|Ga0179593_1118423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3173	Open in IMG/M
3300027591\|Ga0209733_1106112	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300027692\|Ga0209530_1084827	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300027869\|Ga0209579_10478507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	676	Open in IMG/M
3300027879\|Ga0209169_10420944	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300027884\|Ga0209275_10289238	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300027908\|Ga0209006_10669991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	851	Open in IMG/M
3300027911\|Ga0209698_10904964	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300028789\|Ga0302232_10087021	All Organisms → cellular organisms → Bacteria → Proteobacteria	1610	Open in IMG/M
3300028798\|Ga0302222_10083416	All Organisms → cellular organisms → Bacteria → Proteobacteria	1280	Open in IMG/M
3300028877\|Ga0302235_10290980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	707	Open in IMG/M
3300029915\|Ga0311358_10580836	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300029944\|Ga0311352_11047491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → unclassified Holophagaceae → Holophagaceae bacterium	626	Open in IMG/M
3300029951\|Ga0311371_12439630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	535	Open in IMG/M
3300029987\|Ga0311334_10681996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	839	Open in IMG/M
3300029990\|Ga0311336_10923109	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300029999\|Ga0311339_11257040	Not Available	674	Open in IMG/M
3300030046\|Ga0302305_1249508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. 12-68-7	626	Open in IMG/M
3300030399\|Ga0311353_10799074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	805	Open in IMG/M
3300030503\|Ga0311370_11173357	Not Available	835	Open in IMG/M
3300030503\|Ga0311370_12072012	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300030520\|Ga0311372_12129303	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300030730\|Ga0307482_1305733	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → unclassified Spirochaetaceae → Spirochaetaceae bacterium	513	Open in IMG/M
3300030862\|Ga0265753_1082329	Not Available	625	Open in IMG/M
3300030943\|Ga0311366_10540831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1014	Open in IMG/M
3300031057\|Ga0170834_104046845	Not Available	555	Open in IMG/M
3300031231\|Ga0170824_110864688	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300031233\|Ga0302307_10458699	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300031233\|Ga0302307_10721551	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300031234\|Ga0302325_13088710	Not Available	535	Open in IMG/M
3300031236\|Ga0302324_100734591	All Organisms → cellular organisms → Bacteria → Proteobacteria	1387	Open in IMG/M
3300031236\|Ga0302324_101074229	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300031239\|Ga0265328_10180783	All Organisms → cellular organisms → Bacteria → Acidobacteria	798	Open in IMG/M
3300031524\|Ga0302320_10165512	All Organisms → cellular organisms → Bacteria → Proteobacteria	3280	Open in IMG/M
3300031525\|Ga0302326_11741978	Not Available	819	Open in IMG/M
3300031668\|Ga0318542_10492175	Not Available	637	Open in IMG/M
3300031672\|Ga0307373_10362672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300031680\|Ga0318574_10286290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	956	Open in IMG/M
3300031680\|Ga0318574_10478876	Not Available	729	Open in IMG/M
3300031680\|Ga0318574_10883972	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031708\|Ga0310686_102169013	Not Available	782	Open in IMG/M
3300031763\|Ga0318537_10022937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2184	Open in IMG/M
3300031918\|Ga0311367_10448565	All Organisms → cellular organisms → Bacteria → Proteobacteria	1327	Open in IMG/M
3300031942\|Ga0310916_10638659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	903	Open in IMG/M
3300031947\|Ga0310909_11191141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	616	Open in IMG/M
3300031962\|Ga0307479_11888980	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300032008\|Ga0318562_10072150	All Organisms → cellular organisms → Bacteria → Proteobacteria	1927	Open in IMG/M
3300032044\|Ga0318558_10377806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	704	Open in IMG/M
3300032782\|Ga0335082_10881425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	758	Open in IMG/M
3300033158\|Ga0335077_10440321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1391	Open in IMG/M
3300033824\|Ga0334840_112218	Not Available	744	Open in IMG/M
3300034163\|Ga0370515_0093579	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300034282\|Ga0370492_0141974	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.38%
Host-Associated	Host-Associated	8.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.31%
Aquatic	Environmental → Aquatic	12.07%
Plants	Host-Associated → Plants	7.76%
Arthropoda	Host-Associated → Arthropoda	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.03%
Peat	Environmental → Terrestrial → Peat	21.55%
Freshwater	Environmental → Aquatic → Freshwater	6.03%
Sediment	Environmental → Aquatic → Sediment	6.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.17%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.86%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.86%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.86%
Roots	Host-Associated → Plants → Roots	0.86%
Peat Moss	Host-Associated → Plants → Peat Moss	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.55%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.31%
Clay	Environmental → Terrestrial → Soil → Clay	0.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.86%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.72%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.52%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.59%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.59%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.72%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.72%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.86%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.86%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.86%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.86%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.86%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.86%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030046	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078844

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1015460962	3300002245	Forest Soil	MGKKERDVRMSLQTLKVLEAFLENPTEQRSGADVHQRCGI
Ga0062384_1004040401	3300004082	Bog Forest Soil	MGKQVGNVRMSLQTLRVLEIFLENPAERLSGAEVHQRCGIASGTLY
Ga0062388_1025987532	3300004635	Bog Forest Soil	MGKKDTNVRMSLQTLRVLEVFLENPTEQFAGAQVHQRCGI
Ga0070684_1007451371	3300005535	Corn Rhizosphere	MGKQERSVRMSLQTLRTLEAFLESPTDELSGSDVQKRSGL
Ga0070731_103410543	3300005538	Surface Soil	MGKDRDVRISLQTLRVLEAFLESPTDQLSGADVQK
Ga0070731_109937711	3300005538	Surface Soil	MGRKDTRVRMSLQTLKVLEAFLENPTERLSGAEVHQRCGIASG
Ga0068855_1005043993	3300005563	Corn Rhizosphere	MGKQERSVRMSLQTLRTLEAFLESPTDELSGSDVQKRSGLASG
Ga0070763_101089454	3300005610	Soil	MGQKDREVRMSLQTLRVLETFLDNLTEQLAGAEVHQRCG
Ga0080027_103566401	3300005993	Prmafrost Soil	MRMSLQTMRVLELFLESPMEQLSGADVHQRCGIASGTLYP
Ga0075023_1002620503	3300006041	Watersheds	MGKQDRDVRMSLQTLRVLEAFLEDPTGELAGADVQKL
Ga0075028_1001039333	3300006050	Watersheds	MGKPDREVRISLQTLRVLEVFLDNPTDPLSGADVQKRSRLASGTLYP
Ga0075028_1004296472	3300006050	Watersheds	MSLQTLKVLEAFLENPTDQLSGAEVHQRCHLASGTLYPILL
Ga0075019_111281091	3300006086	Watersheds	MGSPERNVRMSLQTLKVLEVFLENPAAQLSGADVHQ
Ga0075030_1009986072	3300006162	Watersheds	MGKKDAKVRMSLQTLRVLEAFLENPTEQLSGADVHQRCRIA
Ga0075030_1010978752	3300006162	Watersheds	MSLQTLHVLEAFLENPSDQLSGADVHQRCGIASGTLYP
Ga0097621_1022120811	3300006237	Miscanthus Rhizosphere	MGKPDRQVRMSLQTLRVLEIFLENPTEQLSGAEVHQRCGI
Ga0116129_100123814	3300009633	Peatland	MGKKDGNVRMSLQTLRVLEVFLENPTERFAGAEVHQRCGMAWLIG*
Ga0116226_111111132	3300009787	Host-Associated	MGKREQKVRMSLQTLRVLETFLENPTEQLSGADVHQRCGI
Ga0123355_120671002	3300009826	Termite Gut	MGKKERDVRISLQTLHVLEAFLENPGEQLAGADVQRRTGLA
Ga0074045_103929002	3300010341	Bog Forest Soil	MGKKDTTVRMSLQTLRVLEAFLENPSEQLAGAEVHQRCGIASGTL
Ga0074044_102376551	3300010343	Bog Forest Soil	MGKEERNVRMSLQTLRVLEAFLESPTASLSGADVHQQCGI
Ga0074044_110093512	3300010343	Bog Forest Soil	MGKEDRNVRMSLQTLKVLEAFLESPMSQLSGADIHQGN
Ga0126370_105364773	3300010358	Tropical Forest Soil	MGKRDRDVRMSLQTLRVLDAFLENPSDELAGADVQKRSGL
Ga0134125_125780661	3300010371	Terrestrial Soil	MSLQTLKVLDAFLSDPTDELSGADVQKRSGIASGTLYPI
Ga0105239_112017391	3300010375	Corn Rhizosphere	MSLQTLRTLEAFLESPTDELSGSDVQKRSGLASGTLYPI
Ga0126350_122523031	3300010880	Boreal Forest Soil	MSLQTLRALESFLENPTDELSGADVQKRSGLASGTLYPILL
Ga0137360_108115732	3300012361	Vadose Zone Soil	MGKRDREVRMSLQTLRVLEAFLEDPTDELSGADVYKRSGIAS
Ga0137358_107201332	3300012582	Vadose Zone Soil	MGKQSRDVRMSLQTLRVLEAFLENPTNELSGADVHKRSSLASGTL
Ga0137397_103371541	3300012685	Vadose Zone Soil	MGKKDTNVRMSLQTLRVLEAFLENPTVQLAGAEVHQ
Ga0137396_106321391	3300012918	Vadose Zone Soil	MSLQTLRVLEAFLENPTDELSGADVQKRGGLASGTLYPILL
Ga0137394_103414231	3300012922	Vadose Zone Soil	MSLQTLRVLEAFLEDPTDQLSGADVHQRCGIASGTLYPIL
Ga0137413_100327431	3300012924	Vadose Zone Soil	MGKKDANVRMSLQTLRVLEVFLENPTERLAGADVHQRCGIASGTL
Ga0137416_109086792	3300012927	Vadose Zone Soil	MSLQTLRVLEAFLENPSVQLAGAEVHQRCGIASGTLYPILLR
Ga0137404_120146912	3300012929	Vadose Zone Soil	MGKQSRDVRMSLQTLRVLEAFLENPTNELSGADVHK
Ga0181522_105427032	3300014657	Bog	MGKQDRDVRMSLQTLKVLEAFLEEPMTQLSGADIHQRSRIASGTLY
Ga0181519_105563462	3300014658	Bog	MSLQTLQVLEAFLENPTVQLAGADVHQRCGIASGTLYP
Ga0157376_115442792	3300014969	Miscanthus Rhizosphere	MGKQERSVRMSLQTLRTLEAFLESPTDELSGSDVQKRS
Ga0137409_102930743	3300015245	Vadose Zone Soil	MGKQDRDVRMSLQTLRTLESFLENPTDELSGADVQKRSGLA
Ga0187779_107893243	3300017959	Tropical Peatland	MSFQTLKVLEAFLENPGEELSGADVHKRSGIASGTL
Ga0187890_104846411	3300018044	Peatland	MGRKDTKVRMSLQTLRVLEAFLENPTLQLAGADVHQR
Ga0187772_114359762	3300018085	Tropical Peatland	MGRTDRPVRMSLQSLRVLEAFLESPAEELSGADVHK
Ga0210403_100605582	3300020580	Soil	MGKKDGNVRMSLQTLRVLEVFLENPTERFAGAEVHQRCGIASGTLYPI
Ga0210399_103954731	3300020581	Soil	MRMSLQTLRVLEVFLENPTEQLSGAEVHQRCGLASGTL
Ga0210396_114758451	3300021180	Soil	MGKESRDVRMSLQTLKVLEAFLENPADQLSGAEVRQRCGLASGTLY
Ga0210388_109789692	3300021181	Soil	MGRKNRDVRISLQTLRVLEAFLDHPAESLSGSDVQ
Ga0213872_103148781	3300021361	Rhizosphere	MGKMDRDVRMSLQTLRVLDAFLASPAEELAGADVHKRSGLASGARY
Ga0213882_103439962	3300021362	Exposed Rock	MGKPDRPVRMSLQTLRVLDAFLENPAHELAGADVQ
Ga0210389_109430121	3300021404	Soil	MGKESRDVRMSLQTLKVLEAFLENPADQLSGAEVR
Ga0210386_111755182	3300021406	Soil	MGKKETSVRMSLQTLRVLEAFLENPTEQLAGAEVHQR
Ga0210394_103922904	3300021420	Soil	MGKKDRDVRISLQTLKVLEVFLENPTEQLSGADVHLHCG
Ga0210391_112485751	3300021433	Soil	MGKKDAGVRMSLQTLRVLEVFLENPTEQLAGADLHQ
Ga0210409_102703783	3300021559	Soil	MGRQDRDVRLSLQTLKVLEAFLENPTDQLSGADVQKRS
Ga0224557_13002051	3300023101	Soil	MGKKDTDVRMSLQTLRVLEAFLENPTAQLAGAEVHQRCG
Ga0247784_10024027	3300023270	Plant Litter	MVKKDRDVRMSLQTMRVLEAFLENPTDELAGADVQKRSGLASGT
Ga0208193_10091774	3300025463	Peatland	MGKKDGNVRMSLQTLRVLEVFLENPTERFAGAEVHQRCGMAWLIG
Ga0207685_104744111	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MGKRDRDVRMSLQTLRVLDAFLENPADELAGADVQKRSGLASGTLY
Ga0207684_108847871	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGKDRNVRMSLQTLHVLEAFLENPTDELSGADVQKRSNLA
Ga0207671_107565312	3300025914	Corn Rhizosphere	MGKQERSVRMSLQTLRTLEAFLESPTDELSGSDVQK
Ga0207671_114517172	3300025914	Corn Rhizosphere	MGKQERSVRMSLQTLRTLEAFLESPTDELSGSDVQKRSG
Ga0207700_104237781	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGKRDRDVRMSLQTLRVLDAFLENPADELAGADVQK
Ga0207700_108030481	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGNPDRQVRMSLQTLRVLEIFLENPTQQLSGAEVHQRCG
Ga0207664_103667153	3300025929	Agricultural Soil	MGKGPRDVRMSLQTLKVLDAFLSEPTDELSGADVQ
Ga0209849_10896021	3300026215	Soil	MGKKDTNVRMSLQTLRVLEAFLENPTVQLAGAEVHQRCGI
Ga0179593_11184231	3300026555	Vadose Zone Soil	SLQTLRVLEAFLENPTDQLAGADVHKRSGLASGTL
Ga0209733_11061122	3300027591	Forest Soil	MGKKDGNVRMSLQTLRVLELFLESPTEQLSGAEVHQRCGIASGTL
Ga0209530_10848271	3300027692	Forest Soil	MGKEDRNPRMSLQTLRVLEVFLENPTAQLSGADVHESCG
Ga0209579_104785071	3300027869	Surface Soil	MGKDRDVRISLQTLRVLEAFLESPTDQLSGADVQKRSG
Ga0209169_104209442	3300027879	Soil	MGKKDTDVRMSLQTLRVLEVFLENPTVQLAGAEVHQHCGIASGTLYP
Ga0209275_102892383	3300027884	Soil	MGKTTGNVRMSLQTLRVLESFLENPLEQLSGADVHQRC
Ga0209006_106699913	3300027908	Forest Soil	MGKTTGNVRMSLQTLRVLESFLENPLEQLSGADVHQ
Ga0209698_109049641	3300027911	Watersheds	MGKKDAKVRMSLQTLRVLEAFLENPTEQLSGADVHQRCRIAS
Ga0302232_100870214	3300028789	Palsa	MSKRDRDVRMSLQTLKVLEAFLENPADELAGADVLQRCRLASGT
Ga0302222_100834161	3300028798	Palsa	MGKTATRVRMSLQTLRVLEIFLENPTEQLAGAEVHQ
Ga0302235_102909801	3300028877	Palsa	MGKTTDNVRMSLQTLRVLEAFLDNPVEQLSGSDVHQ
Ga0311358_105808363	3300029915	Bog	MGTRNPDVRMSLQTLRVLGAFLDNPTESLSGADVHRRSGLATGTLY
Ga0311352_110474911	3300029944	Palsa	MGKGIRDVRLSLQTLHVLEAFLENPTDQLSGADVQKRSRLAS
Ga0311371_124396302	3300029951	Palsa	MGKQDTNVRMSLQTLRVLEAFLEDPTGQLAGAELHQR
Ga0311334_106819961	3300029987	Fen	MGKQDRTVRMSLQTLRTLESFLENPNDELSGSDVQKRSGLASGT
Ga0311336_109231093	3300029990	Fen	MGKQDRDVRMSLQTLRVLEAFLEDPAGELAGADVQKLGHLASGTL
Ga0311339_112570401	3300029999	Palsa	MGTQDGNVRMSLQTLKVLEAFLENPGDALSGADVMQRCQVAS
Ga0302305_12495081	3300030046	Palsa	MGKQDRDVRMSLQTLRVLEAFLENPTDELSGADVQKRGRLAS
Ga0311353_107990743	3300030399	Palsa	MGKTTGNVRMSLQTLRVLESFLENPLEQLSGADVHQRCRIA
Ga0311370_111733571	3300030503	Palsa	MAKQIREVRMSLQTLKVLEAFLENPTDQMSGSEVH
Ga0311370_120720121	3300030503	Palsa	MGKQDTNVRMSLQTLRVLEAFLEDPTGQLAGAELHQRCGIAS
Ga0311372_121293031	3300030520	Palsa	MAKKDREVRMSLQTLQVLEAFLENPTEQLSGAEVHRRCGLASGTLY
Ga0307482_13057332	3300030730	Hardwood Forest Soil	MGKPIKDVRISLQTLRVLDAFLENPTADLAGSDVQKRGKLASGTLYP
Ga0265753_10823291	3300030862	Soil	MGKEDREVRMSLQTLKVLEAFLENPTDQLSGAEVHQRCK
Ga0311366_105408313	3300030943	Fen	MGTQDKDVRMSLQTLRVLEAFLENPTDALAGADVA
Ga0170834_1040468452	3300031057	Forest Soil	MGQKDTNVRMSLQTLRVLEVFLENPTELLAGADVHQ
Ga0170824_1108646881	3300031231	Forest Soil	MGKKDTTVRMSLQTLRVLEAFLENPTEQLAGAEVHQRC
Ga0302307_104586992	3300031233	Palsa	MGKKDTRVRMSLQTLRVLEAFLENPTQQLAGAEVHQRCGIASGTLYP
Ga0302307_107215511	3300031233	Palsa	MGKKDTNVRMSLQTLRVLESFLENPTVQLAGAEVHQRCG
Ga0302325_130887101	3300031234	Palsa	MGTQDGNVRMSLQTLKVLEAFLENPGDALSGADVMQRCQVASGTL
Ga0302324_1007345911	3300031236	Palsa	MGTDDRNVRMSLQTLKVLEAFLADPTRSLSGADVHEQSKIASGTLYP
Ga0302324_1010742292	3300031236	Palsa	MGKQERNVRMSLQTLRVLEAFLENPTEQLSGAEVHQRCGIASGTLYP
Ga0265328_101807832	3300031239	Rhizosphere	MGKPDREMRMSLQTLRVLEAFLAGPSEELAGADVARRGHI
Ga0302320_101655121	3300031524	Bog	MGKENRDVRMSLQTLKVLEAFLENPTDQLSGADVM
Ga0302326_117419781	3300031525	Palsa	MGTQDGNVRMSLQTLKVLEAFLENPGDALSGADVMQRCQVASG
Ga0318542_104921751	3300031668	Soil	MGSRDQVRISLQTLQVLEAFLENPAGELSGADVHRRSGIASGTL
Ga0307373_103626722	3300031672	Soil	MGRRDGDIRISLQTLRALEAFLENPSEELSGADVQKR
Ga0318574_102862901	3300031680	Soil	MVSRDVRMSLQTLKVLEAFLADPTDELSGADIHRRSGIASGTLY
Ga0318574_104788761	3300031680	Soil	MGDRDGNVRLSFQTLKVLEAFFQNPAGELSGADVHKRTEIASG
Ga0318574_108839722	3300031680	Soil	MGKRDRDVRMSLQTLRVLDAFLENPADELAGADVQKRSGL
Ga0310686_1021690131	3300031708	Soil	MGKDREVRMSLQTLRVLEAFLENPMGELAGADVQKRGQQIGRAHV
Ga0318537_100229373	3300031763	Soil	MVSRDVRMSLQTLKVLEAFLADPTDELSGADIHRRSGIASGT
Ga0311367_104485653	3300031918	Fen	MGKQDRDVRMSLQTLRVLEAFLEDPAGELAGADVQKLGHLASG
Ga0310916_106386592	3300031942	Soil	MVSRDVRMSLQTLKVLEAFLADPTDELSGADIHRRSGIA
Ga0310909_111911412	3300031947	Soil	MVSRDVRMSLQTLKVLEAFLADPTDELSGADIHRRSG
Ga0307479_118889801	3300031962	Hardwood Forest Soil	MSLQTLRVLDAFLENPTDELAGADVQKRSGLASGTLY
Ga0318562_100721502	3300032008	Soil	MGDRGGNVRLSFQTLKVLEAFLEKPTGELSGADVHKRTEIASG
Ga0318558_103778061	3300032044	Soil	MVSRDVRMSLQTLKVLEAFLADPTDELSGADIHRRSGIASGTL
Ga0335082_108814251	3300032782	Soil	MGTDRPVRMSLQTLRVLEAFLENPRGEFAGSDLQKR
Ga0335077_104403211	3300033158	Soil	MGRQDRDVRISLQTLKVLEAFLENPTEEISGADVHRRSG
Ga0334840_112218_613_744	3300033824	Soil	MGKKDTKVRMSLQTLRVLEAFLENPTVQLAGADVHQRCGIASGT
Ga0370515_0093579_1149_1298	3300034163	Untreated Peat Soil	MGKQAHDVRMSLQTLKVLEPFLESPADEFSGADLLQRFRLASGTLYPILL
Ga0370492_0141974_832_981	3300034282	Untreated Peat Soil	MGKKDKDTPVRMSLQTLRVLEAFLENPTAQLAGAEVHQRCGIASGTLYPI

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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