Metagenome Family F078838

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078838
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	54 residues
Representative Sequence	MAFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Number of Associated Samples	59
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	94.83 %
% of genes near scaffold ends (potentially truncated)	13.79 %
% of genes from short scaffolds (< 2000 bps)	88.79 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Predicted Viral (50.000 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (46.552 % of family members)
Environment Ontology (ENVO)	Unclassified (93.103 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (86.207 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1GOS2235_10051103 2GOS2232_10078563 3JGI25127J35165_10246695 4Ga0066865_103768563 5Ga0066835_100340273 6Ga0066840_100128013 7Ga0066840_100915022 8Ga0066371_102037952 9Ga0068468_10005911 10Ga0068468_10203603 11Ga0068468_11355344 12Ga0068468_11367363 13Ga0068468_11373433 14Ga0068468_11403964 15Ga0068468_11426305 16Ga0068486_10202245 17Ga0099675_15511722 18Ga0099693_10252473 19Ga0099693_10492202 20Ga0099693_10567394 21Ga0099693_10685033 22Ga0099693_12912433 23Ga0099954_10893271 24Ga0099954_12516382 25Ga0099954_13801763 26Ga0099954_14793661 27Ga0100226_10127123 28Ga0100226_10478151 29Ga0098037_10419344 30Ga0070746_102660322 31Ga0129295_114602252 32Ga0115013_108902972 33Ga0115013_113516021 34Ga0160422_100239325 35Ga0160422_101019292 36Ga0160422_103840182 37Ga0160423_102306402 38Ga0163110_101967843 39Ga0163110_105273922 40Ga0163180_111904642 41Ga0211696_10076153 42Ga0211696_10109662 43Ga0211586_10098542 44Ga0211586_10674631 45Ga0211586_10782452 46Ga0211704_10467831 47Ga0211534_10375882 48Ga0211534_10828752 49Ga0211484_10053377 50Ga0211484_10179341 51Ga0211484_10372753 52Ga0211484_10981682 53Ga0211671_10220242 54Ga0211483_100044759 55Ga0211483_100768992 56Ga0211483_100833472 57Ga0211483_101685733 58Ga0211482_10164711 59Ga0211471_10065802 60Ga0211615_10599701 61Ga0211489_102297992 62Ga0211672_100984393 63Ga0211498_100145597 64Ga0211498_100198334 65Ga0211498_100457783 66Ga0211496_101133792 67Ga0211496_102886811 68Ga0211699_100205013 69Ga0211699_104326831 70Ga0211702_102760072 71Ga0211620_101251041 72Ga0211708_101317873 73Ga0211708_101671741 74Ga0211708_102040323 75Ga0211708_102951391 76Ga0211695_100492054 77Ga0211559_104839181 78Ga0211638_101341983 79Ga0211638_102004912 80Ga0211473_100960743 81Ga0211548_100821793 82Ga0211486_102638563 83Ga0211535_102410863 84Ga0211694_100343253 85Ga0211713_100846215 86Ga0211713_101527525 87Ga0211713_102560892 88Ga0211713_106312942 89Ga0211614_100931452 90Ga0211614_100997465 91Ga0211547_101482034 92Ga0226836_100492484 93Ga0232639_12418292 94Ga0208157_10653903 95Ga0209348_10311134 96Ga0209348_10596893 97Ga0209348_10698874 98Ga0209348_10961902 99Ga0207985_11404572 100Ga0208130_10488022 101Ga0209503_100260763 102Ga0183826_10338481 103Ga0310343_1000106918 104Ga0310343_100125998 105Ga0310343_100564823 106Ga0310343_101112795 107Ga0310343_101148812 108Ga0310343_101492012 109Ga0310343_102354395 110Ga0310343_103152932 111Ga0310343_103436273 112Ga0310343_103610041 113Ga0310343_105494003 114Ga0310343_105928544 115Ga0310343_106321422 116Ga0310343_112725722
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1GOS2235_10051103 2Ga0100226_10127123 3Ga0160422_101019292 4Ga0211586_10674631 5Ga0211496_102886811 6Ga0211547_101482034
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1GOS2235_10051103 2Ga0100226_10127123 3Ga0160422_101019292 4Ga0211586_10674631 5Ga0211496_102886811 6Ga0211547_101482034
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.96% β-sheet: 0.00% Coil/Unstructured: 66.04%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF12098	DUF3574	25.00
PF14700	RPOL_N	0.86
PF12236	Head-tail_con	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.45 %
Unclassified	root	N/A	46.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.55 %
Viruses	superkingdom	All Organisms → Viruses	53.45 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	46.55 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	46.55 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	46.55 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.59 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	46.55 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001954\|GOS2235_1005110	All Organisms → Viruses → Predicted Viral	1388	Open in IMG/M
3300001958\|GOS2232_1007856	All Organisms → Viruses → Predicted Viral	1532	Open in IMG/M
3300002482\|JGI25127J35165_1024669	All Organisms → Viruses → Predicted Viral	1418	Open in IMG/M
3300005523\|Ga0066865_10376856	Not Available	539	Open in IMG/M
3300005606\|Ga0066835_10034027	Not Available	1463	Open in IMG/M
3300005608\|Ga0066840_10012801	All Organisms → Viruses → Predicted Viral	1573	Open in IMG/M
3300005608\|Ga0066840_10091502	Not Available	629	Open in IMG/M
3300006024\|Ga0066371_10203795	Not Available	614	Open in IMG/M
3300006305\|Ga0068468_1000591	All Organisms → Viruses	44636	Open in IMG/M
3300006305\|Ga0068468_1020360	All Organisms → Viruses → Predicted Viral	1035	Open in IMG/M

Showing 1 to 10 of 116 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.86%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.72%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.72%
Oceanic	Environmental → Aquatic → Marine → Oceanic	48.28%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified	46.55%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.86%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.72%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	21.55%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	46.55%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	25.86%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.86%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	1.72%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	46.55%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	16.38%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.93%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.72%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.86%
Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Marine	0.86%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	12.07%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	2.59%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.86%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.59%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001954	Marine microbial communities from Colon, Panama - GS019	Environmental	Open in IMG/M
3300001958	Marine microbial communities from Gulf of Mexico, USA - GS016	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005608	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF84A	Environmental	Open in IMG/M
3300006024	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B	Environmental	Open in IMG/M
3300006305	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0025m	Environmental	Open in IMG/M
3300006329	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500m	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M

Showing 1 to 10 of 59 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2235_10051103	3300001954	Marine	MFNTYIDDRAMIPVLLDHDWMIWKDTWTDCSYETYMALKKMMRHTGNAIPMV*
GOS2232_10078563	3300001958	Marine	MPFDTYIDDRAMIPILLEHDWMIWKDTWTDCSYETYMALKKMMRHNGNAMPMV*
JGI25127J35165_10246695	3300002482	Marine	MPFNTYIDDRAMIPVLLAHDWMVWKDTWTDCHYETYMALKKMMRHNGNAVP
Ga0066865_103768563	3300005523	Marine	MFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHTGNAMPMV*
Ga0066835_100340273	3300005606	Marine	MPFNTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAVPMV*
Ga0066840_100128013	3300005608	Marine	MPFNTYIDDKYMIPILLEHDWIIWKDTWTDCSYETYMALKKMMRHTGNAKELV*
Ga0066840_100915022	3300005608	Marine	MAFNTYIDDRAMIPVLLEHDWMIWKDTWTDCQYETYMALKKMMRHNGNAVPMV*
Ga0066371_102037952	3300006024	Marine	MPFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHTGNA
Ga0068468_10005911	3300006305	Marine	MAFDTYIDDRAMIPILLAHDWMIYNDTWTDCQYETYMALKKMMRHNGNAVPMV*
Ga0068468_10203603	3300006305	Marine	MPFNTYIDDRAMIPILLSHDWMIWKDTWTDCSYETYMALKKMMRHNGNAVPMV*
Ga0068468_11355344	3300006305	Marine	MAFNTYIDDRAMIPILLAHDWMIYNDTWTDCQYETYMALKKMMRHNGNAVPMV*
Ga0068468_11367363	3300006305	Marine	MPFNTYIDDRAMIPVLLEHDWMIWNDTWTDCHYETYMALKKMMRHNGNAVPMV*
Ga0068468_11373433	3300006305	Marine	MPFNTYIDDRAMIPILLAHDWMIWNDTWTDCHYETYMALKKMMRHNGNAVPMV*
Ga0068468_11403964	3300006305	Marine	MFNTYIDDRAMIPILLAHDWMIVNDTWTDCQYETYMALKKMMRHNGNAVPMV*
Ga0068468_11426305	3300006305	Marine	MPFNTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHTGNAVPMV*
Ga0068486_10202245	3300006329	Marine	MNKTRRKKKMFSTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAVPMV*
Ga0099675_15511722	3300006334	Marine	MPFNTYIDDRAMIPILLEHDWMIWHDTWTDCSYETYMALKKMMRHNGNAVPMV*
Ga0099693_10252473	3300006345	Marine	MPFNTYIDDRAMIPVLLAHDWMVWKDTWTDCHYETYMALKKMMRHNGNAVPMV*
Ga0099693_10492202	3300006345	Marine	MFNTYIDDRAMIPILLEHDWMIMNDTWTDCQYETYMALKKMMRHNGNAVPMV*
Ga0099693_10567394	3300006345	Marine	MAFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHNGNAMPMV*
Ga0099693_10685033	3300006345	Marine	MNKTRRKKMFSTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0099693_12912433	3300006345	Marine	MSFNTYIDDRAMIPILLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAVPMV*
Ga0099954_10893271	3300006350	Marine	FNTYIDDRAMIPILLAHDWMIYNDTWTDCQYETYMALKKMMRHNGNAVPMV*
Ga0099954_12516382	3300006350	Marine	MFSTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAVPMV*
Ga0099954_13801763	3300006350	Marine	MFNTYIDDRAMIPILLEHDWMIWKDTWTDCSYETYMALKKMMRHTGNAMPMV*
Ga0099954_14793661	3300006350	Marine	RRKHMAFNTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHTGNAMPMV*
Ga0100226_10127123	3300006480	Marine	MGFNTYIDDRLMIPILLAYDWMIWKDTWTDCPYETYLAIKKKEMHNGNAVEYLTFLKGEMS*
Ga0100226_10478151	3300006480	Marine	MFNTYIDDRAMIPILLEHDWMIWHDTWTDCSYETYMALKKMMRHTGNAVPMV*
Ga0098037_10419344	3300006737	Marine	MPFNTYIDDKDMIPVLLDHDWIIMKDTWTDCSYETYMALKKMMRHTGNAMPMV*
Ga0070746_102660322	3300006919	Aqueous	MPFNTYIDDRAMIPVLLDHDWMIWKDTWTDCSYETYMALKKMLKHNGNAVPFLLGEMS*
Ga0129295_114602252	3300009536	Marine	MPFNTYIDDRAMIPILLEHDWIIWKDTWTDCSYETYMALKKMMRHTGNAMPMV*
Ga0115013_108902972	3300009550	Marine	MPFNTYIDDKDMIPVLLEHDWMIMKDTWTDCSYETYMALKKMMRHTGNAMPMV*
Ga0115013_113516021	3300009550	Marine	MPFNTYIDDKDMIPVLLEHDWMIMKDTWTDCSYETYMALKKMMRHTGNAKPIA*
Ga0160422_100239325	3300012919	Seawater	MPFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKKARHTGNAKVLDY*
Ga0160422_101019292	3300012919	Seawater	MPFNTYIDDRAMIPVLLEHDWMIWKDTWTNCSYETYIALKKMMTHTGNATEYFLRGEMS*
Ga0160422_103840182	3300012919	Seawater	MTFNTYIDDRAMIPVLLDHDWMIWQDTWTNCSYETYIALKKLMTHTGNATEYFLRGEMS*
Ga0160423_102306402	3300012920	Surface Seawater	MPFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHTGNAMPMI*
Ga0163110_101967843	3300012928	Surface Seawater	MTFNTYIDDRAMIPVLLEHDWMIWKDTWTNCSYETYMSLKKMMTHTGNATEYFLRGEMS*
Ga0163110_105273922	3300012928	Surface Seawater	MSFNTYIDDRAMIPVLLDHDWMIWKDTWTNCSYETYMALKKLMTHTGNATEYFLRGEMS*
Ga0163180_111904642	3300012952	Seawater	MAFNTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHTGNAMPMV*
Ga0211696_10076153	3300020252	Marine	MPFNTYIDDRAMIPILLEHDWMIWKDTWTDCSYETYMALKKMMRHTGNAMPMV
Ga0211696_10109662	3300020252	Marine	MPFNTYIDDRAMIPVLLEHDWMIYNDTWTDCHYETYMALKKMMRHNGNAVPMV
Ga0211586_10098542	3300020255	Marine	MPFNTYIDDKDMIPILLEHDWIIWKDTWTDCSYETYMALKKMMRHTGNAKILVS
Ga0211586_10674631	3300020255	Marine	MPFNTYIDDKDMIPVLLDHDWMIWKDTWTDCSYETYVALKKVLKHNGNAVPFLVGEMS
Ga0211586_10782452	3300020255	Marine	MFNTYIDDKDMIPVLLDHDWMIWKDTWTDCSYETYVALKKVLKHNGNAVPFLVGEMS
Ga0211704_10467831	3300020257	Marine	MAFNTYIDDRAMIPILLEHDWMIWKDTWTDCSYETYMALKKMMRHTG
Ga0211534_10375882	3300020261	Marine	MFNTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0211534_10828752	3300020261	Marine	MAFNTYIDDRAMIPVLLEHDWMIWRDTWTNCSYETYMALKKMMTHTGNATEYFLRGEMS
Ga0211484_10053377	3300020269	Marine	MPFNTYIDDKDMIPVLLDHDWMIWKDTWTDCSYETYMALKKVLRHNGNAVPFLVGEMS
Ga0211484_10179341	3300020269	Marine	MFNTYIDDRAMIPILLEHDWMIWKDTWTDCSYETYMALKKMMRHTGNAMPMV
Ga0211484_10372753	3300020269	Marine	MPFNTYIDDRAMIPVLLEHDWMIMKDTWTDCSYETYMALKKMMRHTGNAMPMV
Ga0211484_10981682	3300020269	Marine	MPFNTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHTGNAIPMV
Ga0211671_10220242	3300020270	Marine	MAFNTYIDDRAMIPVLLAHDWIVWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0211483_100044759	3300020281	Marine	NTYIDDRAMIPVLLEHDWMIWKDTWTNCSYETYMSLKKMMTHTGNATEYFLRGEMS
Ga0211483_100768992	3300020281	Marine	DRAMIPVLLEHDWMIWKDTWTNCSYETYMSLKKMMTHTGNATEYFLRGEMS
Ga0211483_100833472	3300020281	Marine	MPFNTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAMPMV
Ga0211483_101685733	3300020281	Marine	MPFNTYIDDRAMIPILLEHDWIIWKDTWTDCSYETYMALKKMMRHTGNAMPMV
Ga0211482_10164711	3300020283	Marine	MPFNTYIDDRAMIPVLLEHDWMIWKDTWTNCSYETYMSLKKMMTHTGNATEYFL
Ga0211471_10065802	3300020287	Marine	MPFNTYIDDRAMIPVLLEHDWMIWKDTWTNCSYETYMSLKKMMTHTGNATEYFLRGEMS
Ga0211615_10599701	3300020299	Marine	MSFNTYIDDRAMIPVLLEHDWMIWQDTWTNCSYETYIALKKLMTHTGNATEYFL
Ga0211489_102297992	3300020366	Marine	MAFNTYIDDRAMIPILLEHDWIIWKDTWTDCSYETYMALKKMMRHTGNAMPMV
Ga0211672_100984393	3300020370	Marine	MAFDTYIDDRAMIPVLLEHDWMILRDTWTDCSYETYMALKKMMRHNGNATPMV
Ga0211498_100145597	3300020380	Marine	MFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHTGNAMPMV
Ga0211498_100198334	3300020380	Marine	MFNTYIDDKDMIPVLLDHDWMIWKDTWTDCSYETYMALKKVLRHNGNAVPFLVGEMS
Ga0211498_100457783	3300020380	Marine	MGFNTYIDDRLMIPILLAYDWMIQKDTWTNCPYETYQAIKKKELHNGNAVEYLTFLKGEM
Ga0211496_101133792	3300020405	Marine	MPFNTYIDDKDMIPVLLDHDWMIWKDTWTDCSYETYVALKKVLKHNGNAVPFILGEMS
Ga0211496_102886811	3300020405	Marine	MPFNTYIDDRAMIPVLLEHDWMIWKDTWTNCSYETYMSLKK
Ga0211699_100205013	3300020410	Marine	MFDTYIDDKDMIPVLLDHDWMIWKDTWTDCSYETYMALKKMLKHNGNAVPFLLGEMS
Ga0211699_104326831	3300020410	Marine	MAFDTYIDDRAMIPILLAHDWIIVKDTWTDCSYETYMALKKMMRHNGNAMPMV
Ga0211702_102760072	3300020422	Marine	MAFDTYIDDRAMIPILLAHDWIIVKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0211620_101251041	3300020424	Marine	MPFNTYIDDRAMIPVLLEHDWMIWQDTWTNCSYETYISLKKLMTHTGNATEYFLRGEMS
Ga0211708_101317873	3300020436	Marine	MFNTYIDDKGMIPVLLDHDWIIWKDTWTDCPYPTYKALYKAYQHNGNATPFLLGEMT
Ga0211708_101671741	3300020436	Marine	MPFNTYIDDKDMIPVLLDHDWIIWKDTWTDCSYETYMALKKMLKHNGNAVPFLLGEMS
Ga0211708_102040323	3300020436	Marine	MFNTYIDDKDMIPVLLDHDWMIWKDTWTDCSYETYMALKKMLKHNGNAVPFLLGEMS
Ga0211708_102951391	3300020436	Marine	MAFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHTGNAMPM
Ga0211695_100492054	3300020441	Marine	MSFNTYIDDRAMIPILLAHDWMIMNDTWTDCQYETYMALKKMMRHNGNAV
Ga0211559_104839181	3300020442	Marine	MPFNTYIDDRAMIPVLLEHDWMIWQDTWTNCSYETYISLKKLMTHTGNATEYFLR
Ga0211638_101341983	3300020448	Marine	MAFDTYIDDKYMIPVLLEHDWMVWNDTWTDCSYETYMALKKLLRHNGNAVPMFTGEMT
Ga0211638_102004912	3300020448	Marine	MPFDTYIDDRAMIPILLSHDWMIMNDTWTDCSYETYMALKKMMRHNGNAMPMV
Ga0211473_100960743	3300020451	Marine	MAFNTYIDDRAMIPILLSHDWMIVNDTWTDCQYETYMALKKMMRHNGNAVPMV
Ga0211548_100821793	3300020454	Marine	MPFNTYIDDRAMIPILLAHDWMIWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0211486_102638563	3300020460	Marine	MPFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHTGNAMPMV
Ga0211535_102410863	3300020461	Marine	MAFNTYIDDRAMIPILLEHDWMIWHDTWTDCSYETYMALKKMM
Ga0211694_100343253	3300020464	Marine	MSFNTYIDDRAMIPILLAHDWMIMNDTWTDCQYETYMALKKMMRHNGNAVPMV
Ga0211713_100846215	3300020467	Marine	MPFNTYIDDKDMIPVLLDHDWIIWKDTWTDCSYETYMALKKMLKHNGNAIPFILGEMS
Ga0211713_101527525	3300020467	Marine	MAFDTYIDDRAMIPVLLEHDWMILRDTWTDCSYETYMALKKMM
Ga0211713_102560892	3300020467	Marine	MPFNTYIDDKDMIPVLLDHDWMIWKDTWTDCSYETYMALKKMMRHTGNAMELV
Ga0211713_106312942	3300020467	Marine	MGFDTYIDDRAMIPVLLDHDWMVWQDTWTDCSYETYMAIKKMMRHTGNAVPMV
Ga0211614_100931452	3300020471	Marine	MSFNTYIDDRAMIPVLLEHDWMIWKDTWTNCSYETYMALKKLMTHTGNATEYFLRGEMS
Ga0211614_100997465	3300020471	Marine	MSFNTYIDDRAMIPVLLEHDWMIWQDTWTNCSYETYIALKKLMTHTGNATEYFLRGEMS
Ga0211547_101482034	3300020474	Marine	TYIDDKDMIPYLLEYDWIIWKDTWTDCPYNTYTAIKKNYLHNGNAVPMFTGEMM
Ga0226836_100492484	3300021792	Hydrothermal Vent Fluids	MFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0232639_12418292	3300021977	Hydrothermal Vent Fluids	MAFNTYIDDRAMIPILLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0208157_10653903	3300025086	Marine	MPFNTYIDDKDMIPVLLDHDWIIMKDTWTDCSYETYMALKKMMRHTGNAMPMV
Ga0209348_10311134	3300025127	Marine	MPFNTYIDDKYMIPILLEHDWIIWKDTWTDCSYETYMALKKMMRHTGNAKELV
Ga0209348_10596893	3300025127	Marine	MAFNTYIDDRAMIPVLLEHDWMIWKDTWTDCQYETYMALKKMMRHNGNAVPMV
Ga0209348_10698874	3300025127	Marine	MPFNTYIDDRAMIPILLSHDWMIWKDTWTDCSYETYMALKKMMRHNGNAMPMV
Ga0209348_10961902	3300025127	Marine	MPFNTYIDDRAMIPILLSHDWMIWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0207985_11404572	3300026203	Marine	MPFNTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0208130_10488022	3300026258	Marine	MFNTYIDDKDMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHTGNAKILVS
Ga0209503_100260763	3300027859	Marine	MPFNTYIDDKDMIPVLLEHDWIIMKDTWTDCSYETYMALKKMMRHTGNAMPLA
Ga0183826_10338481	3300029792	Marine	MPFNTYIDDKDMIPVLLDHDWMIWKDTWTDCSYETYVALKKVLKHNGNAIPFLVGEMS
Ga0310343_1000106918	3300031785	Seawater	MFNTYIDDRAMIPILLAHDWMIWKDTWTDCSYETYIALKKMMRHNGNAVPMV
Ga0310343_100125998	3300031785	Seawater	MFNTYIDDRLMIPILLAYDWMIQKDTWTNCPYETYQAIKKKEMHNGNAVEYLTFLKGEMS
Ga0310343_100564823	3300031785	Seawater	MGFNTYIDDRLMIPILLAYDWMIQKDTWTNCPYETYQAIKKKEMHNGNAVEYLTFLKGEM
Ga0310343_101112795	3300031785	Seawater	MAFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0310343_101148812	3300031785	Seawater	MAFDTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYMALKKMMRHNGNAMPMV
Ga0310343_101492012	3300031785	Seawater	MPFNTYIDDRAMIPILLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAMPMV
Ga0310343_102354395	3300031785	Seawater	MFSTYIDDRAMIPVLLEHDWIIWKDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0310343_103152932	3300031785	Seawater	MPFNTYIDDRAMIPILLAHDWMIMNDTWTDCHYETYMALKKMMRHNGNAVPMV
Ga0310343_103436273	3300031785	Seawater	MGFNTYIDDRLMIPILLAYDWMIWKDTWTDCPYETYLAIKKKEMHNGNAVEYLNFLKGEM
Ga0310343_103610041	3300031785	Seawater	MSFNTYIDDRAMIPVLLEHDWMIWKDTWTDCSYETYIALKKMMTHTGNATEYFLRGEMS
Ga0310343_105494003	3300031785	Seawater	MAFNTYIDDRAMIPILLEHDWMIWHDTWTDCSYETYMALKKMMRHNGNAMPMV
Ga0310343_105928544	3300031785	Seawater	MPFNTYIDDRAMIPVLLEHDWMIWNDTWTDCHYETYMALKKMMRHNGNAVPMV
Ga0310343_106321422	3300031785	Seawater	MPFNTYIDDRAMIPILLEHDWMIWHDTWTDCSYETYMALKKMMRHNGNAVPMV
Ga0310343_112725722	3300031785	Seawater	MFNTYIDDRAMIPILLEHDWMIMNDTWTDCQYETYMALKKMMRHNGNAVPMV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078838

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences