NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F078806

Metagenome / Metatranscriptome Family F078806

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F078806
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 55 residues
Representative Sequence MTTENNITITMQDVDVVRALNPAFADQLTIAAVSRIRAENTQRIEAEAVEKKPAKK
Number of Associated Samples 76
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 68.97 %
% of genes near scaffold ends (potentially truncated) 40.52 %
% of genes from short scaffolds (< 2000 bps) 80.17 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.379 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(64.655 % of family members)
Environment Ontology (ENVO) Unclassified
(81.034 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(71.552 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.24%    β-sheet: 0.00%    Coil/Unstructured: 54.76%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF00902TatC 5.17
PF05866RusA 1.72
PF14090HTH_39 0.86
PF07728AAA_5 0.86
PF06507Auxin_resp 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0805Twin-arginine protein secretion pathway component TatCIntracellular trafficking, secretion, and vesicular transport [U] 5.17
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 1.72


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.38 %
All OrganismsrootAll Organisms33.62 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001450|JGI24006J15134_10069385All Organisms → Viruses → Predicted Viral1358Open in IMG/M
3300004461|Ga0066223_1376122Not Available916Open in IMG/M
3300004951|Ga0068513_1000007Not Available17620Open in IMG/M
3300006352|Ga0075448_10190485Not Available629Open in IMG/M
3300006738|Ga0098035_1027733All Organisms → Viruses → Predicted Viral2165Open in IMG/M
3300006738|Ga0098035_1310116Not Available513Open in IMG/M
3300006750|Ga0098058_1097139Not Available798Open in IMG/M
3300006754|Ga0098044_1135248Not Available994Open in IMG/M
3300006789|Ga0098054_1037153Not Available1893Open in IMG/M
3300006789|Ga0098054_1043417Not Available1736Open in IMG/M
3300006793|Ga0098055_1130060Not Available975Open in IMG/M
3300006921|Ga0098060_1219338Not Available517Open in IMG/M
3300006928|Ga0098041_1026501All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage Lederberg EXVC029P1889Open in IMG/M
3300006928|Ga0098041_1094791Not Available963Open in IMG/M
3300006928|Ga0098041_1259583Not Available553Open in IMG/M
3300006929|Ga0098036_1004284Not Available4899Open in IMG/M
3300006947|Ga0075444_10290375Not Available633Open in IMG/M
3300008050|Ga0098052_1036789Not Available2186Open in IMG/M
3300008050|Ga0098052_1184085Not Available816Open in IMG/M
3300008217|Ga0114899_1166085All Organisms → cellular organisms → Bacteria → Proteobacteria712Open in IMG/M
3300008217|Ga0114899_1216816Not Available601Open in IMG/M
3300008220|Ga0114910_1006854Not Available4480Open in IMG/M
3300008220|Ga0114910_1106177Not Available832Open in IMG/M
3300008952|Ga0115651_1102373Not Available2126Open in IMG/M
3300009173|Ga0114996_10222772All Organisms → Viruses → Predicted Viral1509Open in IMG/M
3300009173|Ga0114996_10618310Not Available803Open in IMG/M
3300009173|Ga0114996_11296135All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage Lederberg EXVC029P507Open in IMG/M
3300009409|Ga0114993_10774353Not Available694Open in IMG/M
3300009420|Ga0114994_10520664Not Available783Open in IMG/M
3300009425|Ga0114997_10022474All Organisms → Viruses → Predicted Viral4278Open in IMG/M
3300009441|Ga0115007_11071083Not Available557Open in IMG/M
3300009441|Ga0115007_11290419Not Available511Open in IMG/M
3300009512|Ga0115003_10197606All Organisms → Viruses → Predicted Viral1209Open in IMG/M
3300009705|Ga0115000_10095670All Organisms → Viruses → Predicted Viral2000Open in IMG/M
3300009705|Ga0115000_10913369Not Available536Open in IMG/M
3300009706|Ga0115002_10152664Not Available1833Open in IMG/M
3300009786|Ga0114999_10521553Not Available914Open in IMG/M
3300009786|Ga0114999_11016588Not Available599Open in IMG/M
3300010149|Ga0098049_1072882Not Available1084Open in IMG/M
3300010149|Ga0098049_1077555All Organisms → Viruses → Predicted Viral1047Open in IMG/M
3300010150|Ga0098056_1011193All Organisms → Viruses → Predicted Viral3286Open in IMG/M
3300010151|Ga0098061_1152769Not Available836Open in IMG/M
3300010153|Ga0098059_1189008Not Available804Open in IMG/M
3300010883|Ga0133547_10528581Not Available2376Open in IMG/M
3300010883|Ga0133547_10914183All Organisms → Viruses → Predicted Viral1708Open in IMG/M
3300010883|Ga0133547_10955587All Organisms → Viruses → Predicted Viral1664Open in IMG/M
3300010883|Ga0133547_11459798All Organisms → Viruses → Predicted Viral1287Open in IMG/M
3300010883|Ga0133547_11770571Not Available1144Open in IMG/M
3300010883|Ga0133547_12031460All Organisms → Viruses → Predicted Viral1051Open in IMG/M
3300014959|Ga0134299_1009871Not Available2013Open in IMG/M
3300017714|Ga0181412_1082721Not Available771Open in IMG/M
3300017731|Ga0181416_1107197Not Available667Open in IMG/M
3300017741|Ga0181421_1094467Not Available779Open in IMG/M
3300017744|Ga0181397_1074618Not Available911Open in IMG/M
3300017750|Ga0181405_1168243Not Available537Open in IMG/M
3300017771|Ga0181425_1288163Not Available504Open in IMG/M
3300017775|Ga0181432_1148046Not Available721Open in IMG/M
3300017775|Ga0181432_1192931Not Available637Open in IMG/M
3300021957|Ga0222717_10011497All Organisms → Viruses6120Open in IMG/M
(restricted) 3300024259|Ga0233437_1328160Not Available583Open in IMG/M
(restricted) 3300024517|Ga0255049_10265822Not Available786Open in IMG/M
3300025052|Ga0207906_1016644All Organisms → Viruses → Predicted Viral1023Open in IMG/M
3300025066|Ga0208012_1004052All Organisms → Viruses → Predicted Viral3125Open in IMG/M
3300025066|Ga0208012_1033544Not Available787Open in IMG/M
3300025072|Ga0208920_1023663Not Available1313Open in IMG/M
3300025103|Ga0208013_1008669All Organisms → Viruses → Predicted Viral3358Open in IMG/M
3300025103|Ga0208013_1090061Not Available783Open in IMG/M
3300025108|Ga0208793_1164644Not Available577Open in IMG/M
3300025110|Ga0208158_1053452Not Available990Open in IMG/M
3300025118|Ga0208790_1080955Not Available969Open in IMG/M
3300025128|Ga0208919_1040077All Organisms → Viruses → Predicted Viral1649Open in IMG/M
3300025168|Ga0209337_1011718Not Available5480Open in IMG/M
3300025168|Ga0209337_1039478All Organisms → Viruses → Predicted Viral2538Open in IMG/M
3300025251|Ga0208182_1007405All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P3352Open in IMG/M
3300025270|Ga0208813_1027077All Organisms → Viruses → Predicted Viral1380Open in IMG/M
3300025270|Ga0208813_1062191Not Available801Open in IMG/M
3300025301|Ga0208450_1098875Not Available640Open in IMG/M
3300025759|Ga0208899_1085781All Organisms → Viruses → Predicted Viral1214Open in IMG/M
3300025818|Ga0208542_1041127All Organisms → Viruses → Predicted Viral1468Open in IMG/M
3300027838|Ga0209089_10303939Not Available908Open in IMG/M
3300027844|Ga0209501_10152038All Organisms → Viruses → Predicted Viral1532Open in IMG/M
3300027847|Ga0209402_10179428All Organisms → Viruses → Predicted Viral1396Open in IMG/M
3300027847|Ga0209402_10369070Not Available874Open in IMG/M
3300027847|Ga0209402_10560404Not Available654Open in IMG/M
3300028022|Ga0256382_1120249All Organisms → cellular organisms → Bacteria → Proteobacteria631Open in IMG/M
3300028125|Ga0256368_1059534Not Available664Open in IMG/M
3300030728|Ga0308136_1079627Not Available749Open in IMG/M
3300030728|Ga0308136_1121706Not Available593Open in IMG/M
3300031519|Ga0307488_10095802All Organisms → Viruses → Predicted Viral2175Open in IMG/M
3300031519|Ga0307488_10122131All Organisms → Viruses → Predicted Viral1864Open in IMG/M
3300031519|Ga0307488_10140962All Organisms → Viruses → Predicted Viral1701Open in IMG/M
3300031519|Ga0307488_10545726Not Available683Open in IMG/M
3300031556|Ga0308142_1059081Not Available570Open in IMG/M
3300031569|Ga0307489_10382742Not Available932Open in IMG/M
3300031569|Ga0307489_10468714All Organisms → Viruses851Open in IMG/M
3300031569|Ga0307489_10688288Not Available712Open in IMG/M
3300031588|Ga0302137_1000875Not Available13458Open in IMG/M
3300031588|Ga0302137_1237600Not Available616Open in IMG/M
3300031605|Ga0302132_10190899Not Available992Open in IMG/M
3300031605|Ga0302132_10350929Not Available674Open in IMG/M
3300031606|Ga0302119_10215294Not Available740Open in IMG/M
3300031623|Ga0302123_10062053All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2038Open in IMG/M
3300031625|Ga0302135_10090388All Organisms → Viruses → Predicted Viral1479Open in IMG/M
3300031627|Ga0302118_10022850Not Available3210Open in IMG/M
3300031627|Ga0302118_10041080All Organisms → Viruses → Predicted Viral2366Open in IMG/M
3300031627|Ga0302118_10138505All Organisms → Viruses → Predicted Viral1194Open in IMG/M
3300031627|Ga0302118_10144021All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage Lederberg EXVC029P1167Open in IMG/M
3300031627|Ga0302118_10342880Not Available682Open in IMG/M
3300031627|Ga0302118_10437551Not Available582Open in IMG/M
3300031628|Ga0308014_1059184Not Available932Open in IMG/M
3300031658|Ga0307984_1002549All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon7424Open in IMG/M
3300031675|Ga0302122_10175685Not Available827Open in IMG/M
3300031675|Ga0302122_10289658All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon581Open in IMG/M
3300031687|Ga0308008_1116094Not Available622Open in IMG/M
3300033742|Ga0314858_040978Not Available1100Open in IMG/M
3300033742|Ga0314858_186313Not Available533Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine64.66%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean6.90%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater6.90%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine6.03%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine2.59%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.59%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.72%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.72%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.72%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.72%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.86%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.86%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.86%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.86%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300004951Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVsEnvironmentalOpen in IMG/M
3300006352Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNAEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300008952Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7umEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009441Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M MetagenomeEnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300014959Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0148 : 4 days incubationEnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300024259 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MGEnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300030728Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_940_32.3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031556Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_538_SCM (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031569Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2EnvironmentalOpen in IMG/M
3300031588Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCMEnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M
3300031606Marine microbial communities from Western Arctic Ocean, Canada - AG5_TmaxEnvironmentalOpen in IMG/M
3300031623Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1EnvironmentalOpen in IMG/M
3300031625Marine microbial communities from Western Arctic Ocean, Canada - CBN3_surfaceEnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031628Marine microbial communities from water near the shore, Antarctic Ocean - #229EnvironmentalOpen in IMG/M
3300031658Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78EnvironmentalOpen in IMG/M
3300031675Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCMEnvironmentalOpen in IMG/M
3300031687Marine microbial communities from water near the shore, Antarctic Ocean - #125EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24006J15134_1006938523300001450MarineMTTENNITITMQDVDVVRALNPAFADQLTIAAVSRIRAENTQRIEAEAVEKKPAKK*
Ga0066223_137612223300004461MarineMTTENNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVSEKKNAKR*
Ga0068513_1000007273300004951Marine WaterMTTDNNITITMQDVDVVRALNPAFADQLAIAAVSRIRVENTQRIEAEAIKSEKKDSNAKSR*
Ga0075448_1019048523300006352MarineMEESAEQNILITLQDVDVVRQVNPDFNQLLFAAAISRMRAENTQRIEAEAID*
Ga0098035_102773333300006738MarineMTTENNITITMQDVDVVRALNPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK*
Ga0098035_131011623300006738MarineMTTENNITITMQDVDVVRTIDPVFNKELLIAAASRMRAEMTQNIEQEATEK
Ga0098058_109713933300006750MarineMTTENNITITMQDVDVVRALNPAFADQLAIAAVSRIRVENTQRIEAEAVKPGKKGSNAKSR*
Ga0098044_113524833300006754MarineMTTENNITITMQDVDVVRQLIPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK*
Ga0098054_103715313300006789MarineTTENNITITMQDVDVVRALNPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK*
Ga0098054_104341713300006789MarineITMQDVDVVRALNPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK*
Ga0098055_113006043300006793MarineMTTENNITITMQDVDVVRQLIPAFADQLTIAAVARIRAENTQRIEAEAVESENTKRGKVSSNAKSR*
Ga0098060_121933823300006921MarineITMQDVDVVRALNPAFADQLAIAAVSRIRVENTQRIEAEAIKPGKKGSNAKSR*
Ga0098041_102650173300006928MarineMTPENNITITMQDVDVVRALNPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK*
Ga0098041_109479123300006928MarineMTTENNITITMQDVDVVRALNPAFADQLAIAAVSRIRVENTQRIEAEAIKPGKKGSNAKSR*
Ga0098041_125958313300006928MarineEGNMTPENNITITMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEEKKNAKR
Ga0098036_100428473300006929MarineMTPENNITITMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEEKKNAKR*
Ga0075444_1029037533300006947MarineMTTENNITITMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAMPAKPAKK*
Ga0098052_103678913300008050MarineTENNITITMQDVDVVRTVDPNFNKQLLIAAASRMRAEMTQNIEKEATEKKNAKR*
Ga0098052_118408513300008050MarineQLIPAFADQLTIAAVARIRAENTQRIEAEAVESENTKRGKVSSNAKSR*
Ga0114899_116608523300008217Deep OceanMTTENNITITMQDVDVVRQVNPEFDKGLIVAAVSRMRAEMAQSIEKEATEKKDAKG*
Ga0114899_121681623300008217Deep OceanMTTENNITITMQDVDVVRTIDPIFNKELLIAAASRMRAEMTQSIEKEATKKDK*
Ga0114910_1006854103300008220Deep OceanTTENNITITMQDVDVVRTIDPIFNKELLIAAASRMRAEMTQSIEKEATKKDK*
Ga0114910_110617713300008220Deep OceanMTTDNNITITMQDVDVVRQVNPEFDKGLIVAAVSRMRAEMAQSIEKEATEKKNAKE*
Ga0115651_110237323300008952MarineMTTENNITITMQDVDVVRTVDPNFNKQLLIAAASRMRAEMTQNIEQEATKKKNAKR*
Ga0114996_1022277223300009173MarineMTTENNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEKKPAKK*
Ga0114996_1061831013300009173MarineQDVDVVRALNPAFADQLTIAAVSRLRAENTQRIEAEAVEIKSDPAINDAG*
Ga0114996_1129613513300009173MarineMTTENNITINMQDVDVVRALNPAFADQLTIAAVSRLRAENTQRIESEAVEKKPAKK*
Ga0114993_1077435323300009409MarineMTTENNITINMQDVDVVRALNPAFADQLTIAAVSRMRAENTQRIEAEAVEAKSDKKVTKG
Ga0114994_1052066433300009420MarineMTTENNITITMQDVDVVRALNPAFGDQLAIAAVSRIRAENTQRIEAEAVEKKPAKK*
Ga0114997_1002247423300009425MarineMTTENNITINMQDVDVVRQLNPAFSDQLTIAAVSRLRAENTQRIEAEAVEKKPAKK*
Ga0115007_1107108313300009441MarineMQDVDVVRQLNPAFSDQLTIAAVARLRAENTQRIEAEAVEKKPAKK*
Ga0115007_1129041923300009441MarineMTTENNITITMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVDKKPAKK*
Ga0115003_1019760613300009512MarineMTTENNITINMQDVDVVRQLNPAFSDQLTIAAVSRIRAENTQRIEAEAVEKKPAKK*
Ga0115000_1009567063300009705MarineMTTENNITINMQDVDVVRQLNPAFSDQLTIAAVSRLRAENTQRIEAEAVSEKKNAKR*
Ga0115000_1091336913300009705MarineMTTENNITINMQDVDVVRALNPAFADQLMIAAVSRIRAENTQRIEAEAVDKKPAKK*
Ga0115002_1015266433300009706MarineMTTENNITITMQDVDVVRALNPAFSDLLTIAAVSRLRAENTQRIEAEAVEKKPAKK*
Ga0114999_1052155313300009786MarineMTTEDSITINMQDVDVVRQLNPTFNQLLLAAAVSRIRIENTQRIESEAVEKKPAKK*
Ga0114999_1101658823300009786MarineMTTENNITITMQDVDVVRALNPAFADQLTIAAVSRMRAENTQRIEAEAVEKKPAKK*
Ga0098049_107288243300010149MarineAVEGNMTTENNITITMQDVDVVRALNPAFADQLAIAAVSRIRVENTQRIEAEAIKPGKKGSNAKSR*
Ga0098049_107755533300010149MarineMTTENNITITMQDVDVVRTVDPNFNKQLLIAAASRMRAEMTQNIEQEATEKKNAKR*
Ga0098056_101119313300010150MarineMTTENNITITMQDVDVVRALNPAFADQLTIAAVARIRAENTQRIEAEAV
Ga0098061_115276923300010151MarineMTTENNITITMQDVDVVRTVDPNFNKQLLIAAASRMRAEMTQNIEQEATEKKNAKS*
Ga0098059_118900813300010153MarineMQDVDVVRQLIPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK*
Ga0133547_1052858143300010883MarineMTTKNNITINMQDVDVVRELNTAFGEQLAIAAVSRIRAENTQRIEAEAVEKKPAKK*
Ga0133547_1091418353300010883MarineMTTENNITITMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEKKPAKK*
Ga0133547_1095558743300010883MarineMTTENNITITMQDVDVVRALNPAFADQLTIAAVSRLRAENTQRIEAEAVSEKKNAKSRG*
Ga0133547_1145979823300010883MarineMTTENNITITMQDVDVVRALNPAFAEQLTIAAVSRLRAENTQRIEDEAVEKKPAKK*
Ga0133547_1177057113300010883MarineINMQDVDVVRQLNPAFSDQLTIAAVSRLRAENTQRIEAEAVEKKPAKK*
Ga0133547_1203146013300010883MarineMTTENNITITMQDVDVVHQLNPAFADQLTIAAVSRLRAENTQRIESEAV
Ga0134299_100987173300014959MarineMTTENNITITMQDVDVVRQLNPAFGEQLAIAAVSRIRAENTQRIEAEAVEKKTAKK*
Ga0181412_108272123300017714SeawaterMTTENNITITMQDVDVVRQLNPAFADQLTIAAVARLRAENTQRIEAEAVEKKPAKK
Ga0181416_110719713300017731SeawaterMTTENNITITMQDVDVVRAVNPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK
Ga0181421_109446723300017741SeawaterMTTENNITITMQDVDVVRALNPAFADQLTIAAVARIRAENTQRIEAEAVEKKPAKK
Ga0181397_107461823300017744SeawaterMTTENNITITMQDVDVVRQLNPAFADQLTIAAVARIRAENTQRIEAEAVEKKTAKK
Ga0181405_116824323300017750SeawaterMTTENNITITMQDVDVVRQLNPAFADQLTIAAVARIRAENTQRIEAEAVEK
Ga0181425_128816323300017771SeawaterTMQDVDVVRALNPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK
Ga0181432_114804613300017775SeawaterTQSHRTNMTTENNITITMQDVDVVRQLNPAFADQLTIAAVSRVRAERTERIETEALDKKPKAKK
Ga0181432_119293123300017775SeawaterENNITITMQDVDVVRTVDPSFNKQLLIAAASRMRAEMTQNIEQEATEKPKK
Ga0222717_1001149783300021957Estuarine WaterMTPENNITITMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEEKKNAKR
(restricted) Ga0233437_132816023300024259SeawaterMTTENNITITMQDVDVVRALNPAFADQLMIAAVSRIRAENTQRIEAEAVEKKTAKK
(restricted) Ga0255049_1026582233300024517SeawaterMTTENKTEATEKLNITITMQDVDVVRALNPAFGEQLAIAAVSRMRAENTQRIEA
Ga0207906_101664423300025052MarineMTTENNITITMQDVDVVRQVNPEFDKGLLVAAVSRMRAEMSQNIEKEATEKKDAKG
Ga0208012_100405213300025066MarineITMQDVDVVRALNPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK
Ga0208012_103354413300025066MarineMTTENNITITMQDVDVVRALNPAFADQLTIAAVARIRAENTQRIEAEAVE
Ga0208920_102366343300025072MarineMTTENNITITMQDVDVVRALNPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK
Ga0208013_100866943300025103MarineMTTENNITITMQDVDVVRALNPAFADQLAIAAVSRIRVENTQRIEAEAIKPGKKGSNAKS
Ga0208013_109006133300025103MarineITITMQDVDVVRQLIPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK
Ga0208793_116464423300025108MarineMTTENNITITMQDVDVVRQLIPAFADQLTIAAVARIRAENTQRIEAEAVE
Ga0208158_105345243300025110MarineNITITMQDVDVVRALNPAFADQLAIAAVSRIRVENTQRIEAEAVKPGKKGSNAKSR
Ga0208790_108095533300025118MarineMTTENNITITMQDVDVVRQLIPAFADQLTIAAVARIRAENTQRIEAEAVEKKSAKK
Ga0208919_104007733300025128MarineMTTENNITITMQDVDVVRQLIPAFADQLTIAAVARIRAENTQRIEAEAVEKKS
Ga0209337_101171833300025168MarineMTTENNITITMQDVDVVRQLIPAFADQLTIAAVSRVRAENTQRIESEAVEKKPAKK
Ga0209337_103947823300025168MarineMTTENNITITMQDVDVVRALNPAFADQLTIAAVSRIRAENTQRIEAEAVEKKPAKK
Ga0208182_100740543300025251Deep OceanMTTENNITITMQDVDVVRTIDPIFNKELLIAAASRMRAEMTQSIEKEATKKDK
Ga0208813_102707743300025270Deep OceanMTTENNITITMQDVDVVRTIDPIFNKELLIAAASRMRAEMTQSIEKEA
Ga0208813_106219113300025270Deep OceanTENNITITMQDVDVVRTIDPIFNKELLIAAASRMRAEMTQSIEKEATKKDK
Ga0208450_109887513300025301Deep OceanMTTDNNITITMQDVDVVRQVNPEFDKGLIVAAVSRMRAEMAQSIEKEATEKKNAKG
Ga0208899_108578123300025759AqueousMEDQQITITMADVDVVRQLYPEFGKALTTAAVSRLRAENVQRMEAEA
Ga0208542_104112723300025818AqueousMEDQQITITMADVDVVRQLYPEFGKALTTAAVSRLRAENVQRM
Ga0209089_1030393913300027838MarineTINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEKKPAKK
Ga0209501_1015203833300027844MarineMTTENNITITMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEKKPAKK
Ga0209402_1017942863300027847MarineTENTNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEKKPAKK
Ga0209402_1036907033300027847MarineMTTENTNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEA
Ga0209402_1056040423300027847MarineMTTENNITITMQDVDVVRALNPAFADQLMIAAVSRIRAENTQRIEAEAVEKKPAKK
Ga0256382_112024913300028022SeawaterENNITITMQDVDVVRQVNPEFDKGLIVAAVSRMRAEMAQSIEKEATEKKDAKG
Ga0256368_105953413300028125Sea-Ice BrineMTTENTNITITMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEQKPAKK
Ga0308136_107962723300030728MarineMTTENKTAATENNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVSEKKNAKR
Ga0308136_112170623300030728MarineMTTENNITITMQDVDVVRQLNPAFSDQLLIAAVARTRAENTQRIESEAVEKKPAKK
Ga0307488_1009580213300031519Sackhole BrineMTTENTNITITMQDVDVVRALNPAFSDLLTIAAVSRLRAENTQRIEAEAVSEKK
Ga0307488_1012213143300031519Sackhole BrineMTTENNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEQKPAKK
Ga0307488_1014096223300031519Sackhole BrineMTTENNITITMQDVDVVRQVNPAFADQLMIAAVSRMRAENTQRIEAEAVEKPADS
Ga0307488_1054572613300031519Sackhole BrineMTTENNITINMQDVDVVRALNPAFADQLMIAAVSRIRAENTQRIEAEAVDKKPAKK
Ga0308142_105908113300031556MarineMTTENNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVSEKKNAKR
Ga0307489_1038274243300031569Sackhole BrineTENNITITMQDVDVVRQLNPAFSDQLTIAAVSRLRAENTQRIEAEAVEKKPAKK
Ga0307489_1046871433300031569Sackhole BrineMTTENNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVE
Ga0307489_1068828813300031569Sackhole BrineITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVSEKKNAKR
Ga0302137_1000875153300031588MarineMTTENNITINMQDVDVVRQLNPAFSDQLTIAAVSRLRAENTQRIEAEAVSEKKNAKR
Ga0302137_123760023300031588MarineMTTENNITITMQDVDVVRALNPAFSDLLTIAAVSRLRAENTQRIEAEAVEQKPAKK
Ga0302132_1019089933300031605MarineMTTENNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEKKPAKK
Ga0302132_1035092913300031605MarineNMTTENNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVSEKKNAKR
Ga0302119_1021529423300031606MarineITITMQDVDVVRALNPAFADQLTIAAVSRLRAENTQRIEAEAVEKKPAKK
Ga0302123_1006205323300031623MarineMTTENNITINMQDVDVVRALNPAFADQLTIAAVSRLRAENTQRIESEAVEKKPAKK
Ga0302135_1009038813300031625MarineMTTENTNITINMQDVDVVRALNPAFSDLLTIAAVSRLRAENTQRIEAEAVEKKPAKK
Ga0302118_10022850103300031627MarineTENNITINMQDVDVVRQLNPAFSDLLTIAAVSRLRAENTQRIEAEAVEKKPAKK
Ga0302118_1004108013300031627MarineQSQRSRLSIRNHKEANMTTENNITINMQDVDVVRQLNPAFSDQLTIAAVSRLRAENTQRIEAEAVEKKPAKK
Ga0302118_1013850563300031627MarineMTTENNITINMQDVDVVRALNPAFAEQLTIAAVSRLRAENTQRIEDEAVEKKPAKK
Ga0302118_1014402133300031627MarineMTTENNITITMQDVDVVRQLNPAFSDQLLIAAVARTRAENTQRIEAEAVEKKPAKK
Ga0302118_1034288023300031627MarineMTTENNITITMQDVDVVRALNPAFADQLAIAAVSRMRAENTQRIEAEAVEKKPAKKS
Ga0302118_1043755123300031627MarineMTTENNITITMQDVDVVRALNPAFADQLTIAAVSRLRAENTQRIEAEAVSEKKNAKSRG
Ga0308014_105918423300031628MarineMTTENTNITINMQDVDVVRQLNPAFSDQLTIAAVSRLRAENTQRIEDEAVEKKPAKK
Ga0307984_1002549183300031658MarineMTTENNITITMQDVDVVRALNPAFSDQLTIAAVSRLRAENTQRIEAEAVEPKPAKK
Ga0302122_1017568513300031675MarineDVDVVRALNPAFAEQLAIAAVSRIRAENTQRIEAEAVEKKPAKK
Ga0302122_1028965823300031675MarineMTTENKAAATENNITINMQDVDVVRALNPAFAEQLAIAAVSRIRAENTQRIEAEAVEKKPAK
Ga0308008_111609423300031687MarineMTTENNITITMQDVDVVRALNSTFADQLAIAAVSRLRAENTQRIESEAVEAKPVKKDS
Ga0314858_040978_678_8483300033742Sea-Ice BrineMTTENNITINMQDVDVVRQLNPAFGEQLAIAAVSRIRAENTQRIEAEAVEKKPAKK
Ga0314858_186313_169_3393300033742Sea-Ice BrineMTTDNNNITITMQDVDVVRQVNPAFADQLMIAAVSRMRAENTQRIEAEAVEKPADS


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