Metagenome / Metatranscriptome Family F078799

Basic Information
Family ID	F078799
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	73 residues
Representative Sequence	RAVGLARELRPLSCGRGTVPADLGIRFVAVHRGLYAQSGFFADGCPERAEAMLRASGWRLLARDGKIATYAR
Number of Associated Samples	99
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.14 %
% of genes from short scaffolds (< 2000 bps)	94.83 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Most Common Taxonomy
Group	Bacteria (68.966 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.241 % of family members)
Environment Ontology (ENVO)	Unclassified (40.517 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.483 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.00% β-sheet: 16.00% Coil/Unstructured: 50.00%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.108.1.0: automated matches	d5wpha_	5wph	0.59559
d.108.1.0: automated matches	d3ld2a1	3ld2	0.59517
d.108.1.0: automated matches	d5t7da_	5t7d	0.59499
d.108.1.0: automated matches	d2z10a_	2z10	0.58687
d.108.1.0: automated matches	d6th0a_	6th0	0.58446

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13382	Adenine_deam_C	15.52
PF00291	PALP	11.21
PF13487	HD_5	0.86
PF02771	Acyl-CoA_dh_N	0.86
PF00585	Thr_dehydrat_C	0.86
PF00041	fn3	0.86
PF13561	adh_short_C2	0.86
PF13594	Obsolete Pfam Family	0.86
PF01637	ATPase_2	0.86
PF04188	Mannosyl_trans2	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1171	Threonine deaminase	Amino acid transport and metabolism [E]	0.86
COG1373	Predicted ATPase, AAA+ superfamily	General function prediction only [R]	0.86
COG1672	Predicted ATPase, archaeal AAA+ ATPase superfamily	General function prediction only [R]	0.86
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.86
COG5542	Mannosyltransferase related to Gpi18	Carbohydrate transport and metabolism [G]	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.17 %
Unclassified	root	N/A	31.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.24 %
Unclassified	root	N/A	31.03 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.17 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.76 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.72 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.76 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.72 %
Rubrivivax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.76 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.72 %
unclassified Rubrivivax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.76 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.72 %
Rubrivivax sp. SCN 70-15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax → Rubrivivax sp. SCN 70-15	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y02HZWSL	Not Available	700	Open in IMG/M
3300000891\|JGI10214J12806_10569530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1105	Open in IMG/M
3300003203\|JGI25406J46586_10033730	Not Available	1887	Open in IMG/M
3300003987\|Ga0055471_10106343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	826	Open in IMG/M
3300004070\|Ga0055488_10125279	Not Available	648	Open in IMG/M
3300004114\|Ga0062593_102627970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300005338\|Ga0068868_100128944	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300005340\|Ga0070689_100008234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7333	Open in IMG/M
3300005354\|Ga0070675_100405472	Not Available	1217	Open in IMG/M
3300005354\|Ga0070675_100702526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300005354\|Ga0070675_100792493	Not Available	866	Open in IMG/M
3300005354\|Ga0070675_101301644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	670	Open in IMG/M
3300005366\|Ga0070659_100232857	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1522	Open in IMG/M
3300005366\|Ga0070659_101938472	Not Available	528	Open in IMG/M
3300005441\|Ga0070700_100260275	Not Available	1249	Open in IMG/M
3300005455\|Ga0070663_101074669	All Organisms → cellular organisms → Bacteria → Terrabacteria group	702	Open in IMG/M
3300005455\|Ga0070663_101375233	Not Available	625	Open in IMG/M
3300005456\|Ga0070678_101652829	Not Available	602	Open in IMG/M
3300005457\|Ga0070662_101636101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300005518\|Ga0070699_101474056	All Organisms → cellular organisms → Bacteria → Terrabacteria group	624	Open in IMG/M
3300005530\|Ga0070679_100949189	Not Available	804	Open in IMG/M
3300005530\|Ga0070679_101391992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648	Open in IMG/M
3300005535\|Ga0070684_100074335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2996	Open in IMG/M
3300005718\|Ga0068866_10002904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7067	Open in IMG/M
3300005719\|Ga0068861_102441798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300005840\|Ga0068870_10342669	All Organisms → cellular organisms → Bacteria → Terrabacteria group	956	Open in IMG/M
3300006038\|Ga0075365_11327836	Not Available	505	Open in IMG/M
3300006354\|Ga0075021_10218118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1168	Open in IMG/M
3300006358\|Ga0068871_101961414	Not Available	557	Open in IMG/M
3300006894\|Ga0079215_10146333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1121	Open in IMG/M
3300006903\|Ga0075426_11049759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300006904\|Ga0075424_101326843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	765	Open in IMG/M
3300009098\|Ga0105245_10672358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1067	Open in IMG/M
3300009098\|Ga0105245_12545621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300009100\|Ga0075418_12293526	Not Available	589	Open in IMG/M
3300009100\|Ga0075418_12469205	Not Available	567	Open in IMG/M
3300009120\|Ga0117941_1030747	Not Available	1418	Open in IMG/M
3300009148\|Ga0105243_11281446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300009156\|Ga0111538_10667897	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300009545\|Ga0105237_11881570	All Organisms → cellular organisms → Bacteria → Terrabacteria group	606	Open in IMG/M
3300012091\|Ga0136625_1297478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300012891\|Ga0157305_10258219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300012898\|Ga0157293_10301267	Not Available	530	Open in IMG/M
3300012911\|Ga0157301_10060805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1006	Open in IMG/M
3300012914\|Ga0157297_10016914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1580	Open in IMG/M
3300012951\|Ga0164300_10625146	All Organisms → cellular organisms → Bacteria → Terrabacteria group	640	Open in IMG/M
3300012958\|Ga0164299_11408099	Not Available	539	Open in IMG/M
3300012960\|Ga0164301_10272791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300012985\|Ga0164308_10751442	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300012985\|Ga0164308_11722353	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300012987\|Ga0164307_11338015	Not Available	600	Open in IMG/M
3300012989\|Ga0164305_10535823	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300013296\|Ga0157374_11681420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300014267\|Ga0075313_1190517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300014969\|Ga0157376_11131992	Not Available	809	Open in IMG/M
3300015360\|Ga0163144_11674812	Not Available	547	Open in IMG/M
3300015371\|Ga0132258_13094100	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300015371\|Ga0132258_13195302	Not Available	1130	Open in IMG/M
3300015373\|Ga0132257_101206224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	958	Open in IMG/M
3300015374\|Ga0132255_100923419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1306	Open in IMG/M
3300017787\|Ga0183260_10512302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300017965\|Ga0190266_10181464	Not Available	985	Open in IMG/M
3300018469\|Ga0190270_10334757	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300018476\|Ga0190274_10173300	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300018481\|Ga0190271_13480776	Not Available	527	Open in IMG/M
3300019361\|Ga0173482_10772588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300019377\|Ga0190264_10127383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1261	Open in IMG/M
3300020082\|Ga0206353_10237918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300020082\|Ga0206353_11734043	All Organisms → cellular organisms → Bacteria → Terrabacteria group	578	Open in IMG/M
3300022915\|Ga0247790_10041325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1043	Open in IMG/M
3300023073\|Ga0247744_1048528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M
3300023083\|Ga0247734_1159677	All Organisms → cellular organisms → Bacteria → Terrabacteria group	596	Open in IMG/M
3300025796\|Ga0210113_1095171	All Organisms → cellular organisms → Bacteria → Terrabacteria group	590	Open in IMG/M
3300025899\|Ga0207642_10183588	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1142	Open in IMG/M
3300025901\|Ga0207688_10894821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300025908\|Ga0207643_10225677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1148	Open in IMG/M
3300025908\|Ga0207643_10729924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300025911\|Ga0207654_10390400	All Organisms → cellular organisms → Bacteria → Terrabacteria group	966	Open in IMG/M
3300025912\|Ga0207707_10610791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300025920\|Ga0207649_11627886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300025926\|Ga0207659_10623046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300025931\|Ga0207644_10576666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	933	Open in IMG/M
3300025933\|Ga0207706_10925102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300025935\|Ga0207709_11415860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300025945\|Ga0207679_11134306	Not Available	717	Open in IMG/M
3300025949\|Ga0207667_11990977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300025972\|Ga0207668_10834239	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300025972\|Ga0207668_11221446	Not Available	676	Open in IMG/M
3300025972\|Ga0207668_11467242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300025972\|Ga0207668_11717614	Not Available	567	Open in IMG/M
3300025986\|Ga0207658_12046179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	521	Open in IMG/M
3300026067\|Ga0207678_10338849	Not Available	1295	Open in IMG/M
3300026067\|Ga0207678_11788043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300026075\|Ga0207708_11987092	Not Available	509	Open in IMG/M
3300026078\|Ga0207702_12437429	All Organisms → cellular organisms → Bacteria → Terrabacteria group	510	Open in IMG/M
3300026118\|Ga0207675_101659289	All Organisms → cellular organisms → Bacteria → Terrabacteria group	659	Open in IMG/M
3300026121\|Ga0207683_10615960	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1005	Open in IMG/M
3300027870\|Ga0209023_10435350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax → Rubrivivax sp. SCN 70-15	801	Open in IMG/M
3300028596\|Ga0247821_10799728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300028754\|Ga0307297_10163708	Not Available	764	Open in IMG/M
3300028812\|Ga0247825_10099810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1965	Open in IMG/M
3300028870\|Ga0302254_10028363	All Organisms → cellular organisms → Bacteria	1971	Open in IMG/M
3300028872\|Ga0307314_10203501	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300031226\|Ga0307497_10480581	Not Available	609	Open in IMG/M
3300031722\|Ga0311351_10748203	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300031847\|Ga0310907_10017655	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300031873\|Ga0315297_10098741	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300031908\|Ga0310900_10458242	Not Available	982	Open in IMG/M
3300032018\|Ga0315272_10690721	Not Available	519	Open in IMG/M
3300032122\|Ga0310895_10041903	Not Available	1635	Open in IMG/M
3300032143\|Ga0315292_11461025	Not Available	555	Open in IMG/M
3300032173\|Ga0315268_11437728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300032211\|Ga0310896_10303807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300032256\|Ga0315271_11740620	Not Available	535	Open in IMG/M
3300033550\|Ga0247829_10437325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1079	Open in IMG/M
3300033550\|Ga0247829_11269928	Not Available	610	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.59%
Host-Associated	Host-Associated	46.55%
Engineered	Engineered	0.86%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	46.55%
Terrestrial	Environmental → Terrestrial	40.52%
Aquatic	Environmental → Aquatic	12.07%
Solid Waste	Engineered → Solid Waste	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	37.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.52%
Freshwater	Environmental → Aquatic → Freshwater	7.76%
Marine	Environmental → Aquatic → Marine	2.59%
Sediment	Environmental → Aquatic → Sediment	1.72%
Peat	Environmental → Terrestrial → Peat	1.72%
Roots	Host-Associated → Plants → Roots	1.72%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.86%
Grass	Engineered → Solid Waste → Grass	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.34%
Loam	Environmental → Terrestrial → Soil → Loam	6.90%
Lake	Environmental → Aquatic → Freshwater → Lake	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.45%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.59%
Ice	Environmental → Aquatic → Freshwater → Ice	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.86%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%
Composting	Engineered → Solid Waste → Grass → Composting	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.34%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.17%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.45%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.86%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.86%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023083	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L103-311B-2	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_02270510	2170459021	Switchgrass, Maize And Mischanthus Litter	LSCGRGAVPAALGIRFVVVHRGLYDQSGFFAPGCADRAEAALRRAGWRLLARNGAISSWERP
JGI10214J12806_105695303	3300000891	Soil	STIAPPAADRLARRLRGLSCGRGEIPADLGIRFVAVHRGLYEQSGFFGPACAGQAEAMLRERGWHLLARDGAIATYAR*
JGI25406J46586_100337302	3300003203	Tabebuia Heterophylla Rhizosphere	PAVGAARRLRGLSCGRGTIPSELGVRFVVVHRGLYRQSGFYADECADRAEHALLEAGWRLLARDGPVLTFALAR*
Ga0055471_101063432	3300003987	Natural And Restored Wetlands	PKRAVGLARELRPLSCGRGSIPGELGIRFVAIHRGLYAASGFFGAGCAERAETMLRENGWRLLARDGPISTYGRR*
Ga0055488_101252792	3300004070	Natural And Restored Wetlands	AAKRLARRLRPLSCGRGTIPPDLQIRFVAVHRGVYAQNESFASSCPDAAEAWLRSNGWRVLERDGPISSWTR*
Ga0062593_1026279702	3300004114	Soil	RLARRLRGLSCGRGEIPADLGIRFVAVHRGLYEQSGFFGPACAGQAEAMLRERGWHLLARDGAIATYAR*
Ga0068868_1001289441	3300005338	Miscanthus Rhizosphere	ADRLARRLRGLSCGRGEIPADLGIRFVAVHRGLYEQSGFFGPACAGQAEAMLRERGWHLLARDGAIATYAR*
Ga0070689_1000082341	3300005340	Switchgrass Rhizosphere	KRAVGLARELRPLSCGRGTVPADLGIRFVAVHRGLYAQSGFFADGCPERAEAMLRASGWRLLARDGKIATYAR*
Ga0070675_1004054721	3300005354	Miscanthus Rhizosphere	YSTIAPKRAVGLARELRPLSCGRGTVPADLGVRFVAVHRGLYAQSGFFAADCPARAEATLRARGWRLLARDGQIATYTR*
Ga0070675_1007025261	3300005354	Miscanthus Rhizosphere	GYSTIAPPAADRLARRLRGLSCGRGEIPADLGIRFVAVHRGLYEQSGFFGPACAGQAEAMLRERGWHLLARDGAIATYAR*
Ga0070675_1007924932	3300005354	Miscanthus Rhizosphere	AADRLARRLRPLSCGRGTIPAELGVRFVVVHRGLYEQSGFFAADCAEGAEAALRRAGWRLLARDGAISSWQRP*
Ga0070675_1013016441	3300005354	Miscanthus Rhizosphere	LARELRPLSCGRGTVPAGLGIRFVVVHRALYAQSGFFAADCPDRTEATLRARGWRLLARDGQIATYTR*
Ga0070659_1002328572	3300005366	Corn Rhizosphere	TIAPKRAVGLARELRPLSCGRGTVPADLGIRFVAVHRALYAQSGFFAADCPARAEAMLRARGWRLLTRDGAISTYAR*
Ga0070659_1019384722	3300005366	Corn Rhizosphere	YSTIAPKRAVGLARELRPLSCGRGTVPADLGIRFVAIHRGLYEQSGFFAPDCPGRADAMLRARGWHLLARDGQTATYAR*
Ga0070700_1002602751	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	ELRPLSCGRGTVPADLGVRFVAVHRGLYAQSGFFAADCPARAEAMLHASGWRLLARDGQIATYTR*
Ga0070663_1010746692	3300005455	Corn Rhizosphere	AVGLARELRPLSCGRGTVPADLGIRFVAVHRALYAQSGFFAADCPARAEAMLRARGWRLLTRDGAISTYAR*
Ga0070663_1013752331	3300005455	Corn Rhizosphere	YSTTAPPAADRLARQLRPLSCGRGTIPRNLGIRYVAVHHGLYEQSGFFAAGCATRAEAALRRGGWRLLARDGAISSWERP*
Ga0070678_1016528291	3300005456	Miscanthus Rhizosphere	RPLGYSTTAPRAADRLARQLRPLSCGRGTIPAKLGIRFVVVHRGLYEQSGFFAAGCAAQAEAALRRAGWRLLARDGAISSWELP*
Ga0070662_1016361012	3300005457	Corn Rhizosphere	IAPKRAVGLARELRPLSCGRGTVPAGLGVRFVVVHRGLYAQSAFFAAGCPDRAEEMLRTSGWRLLARDRGIAAYAR*
Ga0070699_1014740561	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RAVGLARELRPLSCGRGTVPADLGIRFVAVHRGLYAQSGFFADGCPERAEAMLRASGWRLLARDGKIATYAR*
Ga0070679_1009491891	3300005530	Corn Rhizosphere	KRAVGLARELRPLSCGRGTVPADLGVRFVAVHRGLYAQSGFFAADCPARAEAMLHASGWRLLARDGQIATYTR*
Ga0070679_1013919922	3300005530	Corn Rhizosphere	PKRAVGLARELRPLSCGRGTVAAGLGIRFVAVHRALYAQSGFFAADCPDRTEATLRARGWRLLARDGQIATYTR*
Ga0070684_1000743351	3300005535	Corn Rhizosphere	PKRAVGLARELRPLSCGRGTVPAGLGIRFVVVHRALYAQSGFFAADCPDRTEATLRARGWRLLARDGQIATYTR*
Ga0068866_100029041	3300005718	Miscanthus Rhizosphere	RPLSCGRGTVPADLGIRFVAVHRALYAQSGFFAADCPARAEAMLRARGWRLLTRDGAISTYAR*
Ga0068861_1024417982	3300005719	Switchgrass Rhizosphere	RPQGYSTIAPKRAVGLARELRPLSCGRGTIPDGLGIRFVAIHRGLYEQSGFFSPGCPDRAEAMLRTSGWRLVARDGQIATYAR*
Ga0068870_103426691	3300005840	Miscanthus Rhizosphere	AVGLARELRPLSCGRGTVPADLGIRFVAIHRGLYEQSGFFAADCPARAEAMLRARGWRLLTRDGAISTYAR*
Ga0075365_113278361	3300006038	Populus Endosphere	PQGYSTVAPRPARRLARELRGLSCGRGEIPAGLGVRYVAVHRGLYAQSGFFDASCPERAEAALRRAGWRLLARDGPIATYARR*
Ga0075021_102181181	3300006354	Watersheds	ARRLRGLSCGRGDIPSELGVRFVTVHRGLYAQSRFFGAGCADAAESMLRALGWRLLARDGAISSWRSP*
Ga0068871_1019614142	3300006358	Miscanthus Rhizosphere	PPAADRLARRLRPLSCGRGTIPAGLGIRFVVVHRGLYEQSGFFAAGCAAQAEAALRRAGWRLLARDGAISSWELP*
Ga0079215_101463331	3300006894	Agricultural Soil	AADRVARELRGLSCGRGGVPPELGLRYVAVHRGLYAQSGFFGASCPARAEAALRRAGWRLVARDGPIATFARG*
Ga0075426_110497591	3300006903	Populus Rhizosphere	LRGLSCGRGSVPADLGVRFVAVHRGLYAQSGFFGPGCAERAEAMLGADGWKLLARDGQIASYGR*
Ga0075424_1013268432	3300006904	Populus Rhizosphere	RAVGLARELRPLSCGRGTVPASLDIRFVAVHRALYAQSGFFAADCPDRTEATLRARGWRLLARDGQIATYTR*
Ga0105245_106723581	3300009098	Miscanthus Rhizosphere	QGYSTIAPKRAVGLARELRPLSCGRGTVPAGLGVRFVVVHRSLYAQSGFFAAGCPDRAEAMLRASGWRLIARDGGIATYAR*
Ga0105245_125456211	3300009098	Miscanthus Rhizosphere	QGYSTIAPKRAVGLARELRPLSCGRGTVPAGLGVRFVVVHRGLYAQSAFFAAGCPDRAEEMLRTSGWRLLARDRGIAAYAR*
Ga0075418_122935262	3300009100	Populus Rhizosphere	LARELRGLSCGRGEIPAGLGVRYVAVHRGLYAQSGFFDASCPERAEAALRRAGWRLLARDGPIATYARR*
Ga0075418_124692051	3300009100	Populus Rhizosphere	ELRPLSCGRGTVPAGLGVRFVAVHRGLYAQSGFFAADCPARAEAMLHASGWRLLARDGQIATYTR*
Ga0117941_10307471	3300009120	Lake Sediment	RELRGLSCGRGTIPAGLGVRFVSVHRAQYAQSRFFGAGCEAAAEARLRALGWHLLARDGGISSWRSP*
Ga0105243_112814461	3300009148	Miscanthus Rhizosphere	PAADRLARRLRGLSCGRGEIPADLGIRFVAVHRGLYEQSGFFGPACAGQAEAMLRERGWHLLARDGAIATYAR*
Ga0111538_106678973	3300009156	Populus Rhizosphere	ELRPLSCGYGTIPDGLGVRFVAVHRGLYEQSGFFAPDCPGRAEAMLRARGWHLLARDGQIATYAR*
Ga0105237_118815701	3300009545	Corn Rhizosphere	QGYSTIAPKRAVGLARELRPLSCGRGTVPADLGIRFVAVHRALYAQSGFFAADCPARAEAMLRARGWRLLTRDGAISTYAR*
Ga0136625_12974782	3300012091	Polar Desert Sand	LSCGRGTVPSELGVRFVTVHRGLYEQSRFFAPSCPGRAEAALLAAGWRLLARDGPIAAYARR*
Ga0157305_102582192	3300012891	Soil	TIAPRRAVGVARELRPLSCGRGTIPRDLGIRFVAIQRGLYAQSGFFAAGCADRAEAMLRADGWRRLARDGPITTYAR*
Ga0157293_103012672	3300012898	Soil	PQGYSTLAPPPANRLARRLRGLSCGRGSVPADLGVRFVAVHRGLYAQSGFFGSGCAERAEAMLHADGWRLLARNGQIASYGR*
Ga0157301_100608053	3300012911	Soil	VGLARELRPLSCGRGTVPAELGVRFVVVHRGLYAQSAFFAAGCPDRAETMLRTSGWRLLARDGGIAAYTR*
Ga0157297_100169141	3300012914	Soil	RAVGLARELRPLSCGRGTVPAELGVRFVVVHRGLYAQSAFFAAGCPDRAEEMLRTSGWRLLARDGGIAAYAR*
Ga0164300_106251461	3300012951	Soil	RELRALSCGRGEIPAGLGIRFVALHRGLYGQSGFFGPGCADRAEAMLSTDGWRLLARDGPIATYGR*
Ga0164299_114080991	3300012958	Soil	ARELRPLSCGRGTIPTDLGIRFVAVHRGLYAQSGFFAPDCAARADAMLRAGGWRVLARDGQIVTYAR*
Ga0164301_102727912	3300012960	Soil	LSCGRGSVPAGLGVRFVVLHRSLYAQSGFFGSGCAERAEAMLHADGWRLLARNGQIASYGR*
Ga0164308_107514422	3300012985	Soil	LARELRPLSCGRGHVPPALGIRYVIVHRGLYGQSGFFAPGCAERAERALRRDGWRLLVRDGPISSWERWSQSNRSAPRANHER*
Ga0164308_117223531	3300012985	Soil	PLGYSTTAPPASDVLARRLRPLSCGRGTIPAGLAIRFVVVHRGLYDQSGFFATGCAARAEAALRRAGWRLLARDGAISSWERP*
Ga0164307_113380152	3300012987	Soil	SCGRGTIPANLGIRFVVVHRGLYEQSGFFADDCADRAEAALRRAGWRLLARDGAISSWQRP*
Ga0164305_105358232	3300012989	Soil	PPAADHLARELRGLSCGRGTVPPELGVRFVVVHRGLYRQSGFFASGCADKAETALRRHGWRLLARAEQISSWQAP*
Ga0157374_116814202	3300013296	Miscanthus Rhizosphere	LGYSTTAPPAADRLARRLRPLSCGRGTIPAGLGIRFVVVHRGLYEQSGFFAAGCAAQAEAALRRAGWRLLARDGAISSWELP*
Ga0075313_11905171	3300014267	Natural And Restored Wetlands	RLARELRGLSCGRAAIPPGLGVRFVALHRGLYEQSGFFGARCADRAETMLRADGWQLLVRDGPIASYGRLSDVRATAARG*
Ga0157376_111319922	3300014969	Miscanthus Rhizosphere	RLARQLRPLSCGRGTIPTDLGIRFVVVHRGLYEQSGFFAAGCAARAEAALRRDGWRLLARDGAISSWERP*
Ga0163144_116748121	3300015360	Freshwater Microbial Mat	TATMASELLTRRLRGLSCGYGSLPPALGVRFVTVHRGLYRQSGWFAADCADRAEAALRRDGWSLLARDGAISSWEAPR*
Ga0132258_130941003	3300015371	Arabidopsis Rhizosphere	ELRAPSCGRGEIPAGLGIRFVALHRGLYGQSGFFGPGCADRAEAMLSTDGWRLLARDGPIATYGR*
Ga0132258_131953022	3300015371	Arabidopsis Rhizosphere	APKRAVGLARELRPLSCGRGTVPADLGVRFVAVHRGLYAQSGFFAADCPARAEAMLHASGWRLLARDGQIATYTR*
Ga0132257_1012062241	3300015373	Arabidopsis Rhizosphere	GYSTLAEPRAVGLARELRGLSCGRGAIPDDLGIRFVTVHRGLYAQSGFFGANCPARAEAMLRAAGWRLLARDGQIWTYGR*
Ga0132255_1009234191	3300015374	Arabidopsis Rhizosphere	AREPRELSCGRGEIPPGLGVRFVAVHRDLYDQSGFFGTGCADRAETMLRARGWRLLARDGPIATYAR*
Ga0183260_105123021	3300017787	Polar Desert Sand	STTARQRAVGVARELRGLSCGRGRVPAELGIRFVVVHRGLYEQSGFFAATCPDRAEAALEAAGWRLLARDGPIAAYGRA
Ga0190266_101814641	3300017965	Soil	LRPLSCGRGTIPAELGVRFVVVHRGLYEQSGFFAAGCAARAEAALRRDGWRLLARDGAISSWERP
Ga0190270_103347571	3300018469	Soil	LAPRAADRLARELRGLSCGRGEIPPGLGIRYVAVHRGLYAQSGFFGASCPQRAEEALRRAGWRLVVRDGPIATYERG
Ga0190274_101733001	3300018476	Soil	RLARELRGLSCGRGVIPPRLGIRYVAVHRGLYAQSGFFGASCPRRAEEALLRAGWRLVVRDGPIATYERG
Ga0190271_134807762	3300018481	Soil	YSTLAPPAADRLSRELRGLSCGQGSVPRELGIRYVAVHRGLYAQSGFFGASCPARAEAALRRAGWRLVARDGPIATFARG
Ga0173482_107725881	3300019361	Soil	STIAPKRAVGLARELRPLSCGRGTVPADLGIRFVAVHRALYAQSGFFAPDCPDRAEAMLRARGWRLLARDGQIATYTR
Ga0190264_101273831	3300019377	Soil	GPTEADRLARRLRPLSCGRGTIPAGIAFVALHRGLYGQSAYFGPRCADEAEAALRRTGWRLLERDGAVAVYARS
Ga0206353_102379181	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	LRPLSCGRGTIPRDLGIRFVAIHRGLYAQTGFFAAGCADRAEAMLRADGWRRLARDGPITTYAR
Ga0206353_117340431	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	LARRLRGLSCGRGSVPAGLGVRFVVLHRSLYAQSGFFGSGCAERAEAMLHADGWRLLARNGQIASYGR
Ga0247790_100413253	3300022915	Soil	TIAPPAADRLARELKGLSCGRGEIPADLGIRFVAVHRGLYEQSGFFGPGCAGQAEAMLRERGWHLLARDGAIATYAR
Ga0247744_10485281	3300023073	Soil	ARELKGLSCGRGEIPADLGIRFVAVHRGLYEQSGFFGPGCAGQAEAMLRERGWHLLARDGAIATYAR
Ga0247734_11596771	3300023083	Plant Litter	RAVGLARELRPLSCGRGTVPADLGIRFVAIHRGLYEQSGFFAADCPARAEAMLRARGWRLLTRDGAISTYAR
Ga0210113_10951711	3300025796	Natural And Restored Wetlands	QGYSTLAPPAADRLARELSPLSCGRGEVPPELGIGFVAVHRGLYVQSGFEDDCAARAEKMLRGGGWRLLARDGQIAVYATR
Ga0207642_101835881	3300025899	Miscanthus Rhizosphere	LARELRPLSCGRGTVPADLGIRFVAVHRGLYAQSGFFADGCPERAEAMLRASGWRLLARDGKIATYAR
Ga0207688_108948212	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	PLSCGRGTVPAELGVRFVVVHRGLYAQSAFFAAGCPDRAEEMLRTSGWRLLARDRGIAAYAR
Ga0207643_102256774	3300025908	Miscanthus Rhizosphere	GLARELRPLSCGRGTVPAGLGIRFVAVHRALYAQSGFFAADCPDRTEATLRARGWRLLARDGQIATYTR
Ga0207643_107299242	3300025908	Miscanthus Rhizosphere	RPQGYSTLAPPAADRLARRLRGLSCGRGEIPAGLGIRFVAVHRGLYDQSGFFGTGCADRAETMLRARGWRLLARDGPIATYAR
Ga0207654_103904001	3300025911	Corn Rhizosphere	VGLARELRPLSCGRGTVPVDLGIRFVAVHRGLYAQSGFFADGCPERAEAMLRANGWRLLARDGKIATYAR
Ga0207707_106107912	3300025912	Corn Rhizosphere	DRLARRLRGLSCGRGEIPADLGIRFVAVHRGLYEQSGFFGPGCAGQAEAMLRERGWHLLARDGAIATYAR
Ga0207649_116278861	3300025920	Corn Rhizosphere	ANRLARRLRGLSCGRGSVPADLGVRFVAVHRGLYAQSGFFGPGCADRAEAKLGADGWKLLARDGQIASYGR
Ga0207659_106230461	3300025926	Miscanthus Rhizosphere	GYSTIAPPAADRLARRLRGLSCGRGEIPADLGIRFVAVHRGLYEQSGFFGPACAGQAEAMLRERGWHLLARDGAIATYAR
Ga0207644_105766661	3300025931	Switchgrass Rhizosphere	GYSTTAPPAADRLARRLRPLSCGRGTIPAELGVRFVVLHRGLYEQSGFFADDCADRAEAALRRAGWRLLARHGAVSSWQRP
Ga0207706_109251021	3300025933	Corn Rhizosphere	IAPKRAVGLARELRPLSCGRGTVPAGLGVRFVVVHRGLYAQSAFFAAGCPDRAEEMLRTSGWRLLARDRGIAAYAR
Ga0207709_114158601	3300025935	Miscanthus Rhizosphere	RPQGYSTIAPPAADRLARRLRGLSCGRGEIPADLGIRFVAVHRGLYEQSGFFGPGCAGQADAMLRERGWHLLARDGAIATYAR
Ga0207679_111343062	3300025945	Corn Rhizosphere	NRLARRLRGLSCGRGSVPADLGVRFVAVHRGLYAQSGFFGPGCAERAEAMLGADGWKLLARDGQIASYGR
Ga0207667_119909771	3300025949	Corn Rhizosphere	TIAPRRAVGVARELRPLSCGRGTIPRDLGIRFVAIQRGLYAQSGFFAAGCADRAEAMLRADGWRRLARDGPITTYAR
Ga0207668_108342392	3300025972	Switchgrass Rhizosphere	PPAADRLSRPLRPLSCGRGTIPAELGVRFVVVHRGAYRQSRFFAAGCAERAEAALRRLGWRLLARDGAISSWRAP
Ga0207668_112214462	3300025972	Switchgrass Rhizosphere	DRLARQLRPLSCGRGTIPTDLGIRYVVVHHGLYKQSGFFAAACAARAEAVLRRDGWRPLARDGAISSWERP
Ga0207668_114672421	3300025972	Switchgrass Rhizosphere	ELKGLSGGRGEIPADLGIRFVAVHRGLYEQSGFFGPACAGQAEAMLRERGWHLLARDGAIATYAR
Ga0207668_117176142	3300025972	Switchgrass Rhizosphere	LSTLAPRVADRLARELRGLSCGRGELPPALGVRYVAVHRGLYAQSRFFGASCPDDAEAALRRAGWRLVARDGAIATYERG
Ga0207658_120461792	3300025986	Switchgrass Rhizosphere	ARELRSLSCGRGKVPARLGVRYVIVHRGLYDQSGFFAPGCAGQAEQVLRRDGWRLLTRDGQISSWESQSNRSAPPANHEQ
Ga0207678_103388491	3300026067	Corn Rhizosphere	LARELRPLSCGRGTVPADLGIRFVAVHRALYAQSGFFAADCPDRTEATLRARGWRLLARDGQIATYTR
Ga0207678_117880431	3300026067	Corn Rhizosphere	PPPANRLARRLRELSCGRGSVPADLGVRFVAVHRGLYAQSGFFGPGCADRAEAKLGADGWKLLARDGQIASYGR
Ga0207708_119870922	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LRAISCGRGTIPPRLGVRFVAVHRGLYRQSGWFAAGCAERAEASLRQQGWRLLGRDGPISTWEAPS
Ga0207702_124374291	3300026078	Corn Rhizosphere	TLAPPAADRLARRLRGLSCGRGSVPAGLGVRFVVLHRSLYAQSGFFGSGCAERAEAMLHADGWRLLARNGQIASYGR
Ga0207675_1016592891	3300026118	Switchgrass Rhizosphere	VGLARELRPLSCGRGTIPDGLGIRFVAIHRGLYEQSGFFSPGCPDRAEAMLRTSGWRLVARDGQIATYAR
Ga0207683_106159604	3300026121	Miscanthus Rhizosphere	ARELRPLSCGRGTVAAGLGIRFVAVHRALYAQSGFFAADCPDRTEATLRARGWRLLARDGQIATYTR
Ga0209023_104353502	3300027870	Freshwater And Sediment	MASELLSRDLRSLSCGYGSLPPGLGVRFLAVHRGLYRQSGWFAADCADRAEAALRRKGWTLLARDGAIS
Ga0247821_107997281	3300028596	Soil	PAADRLARELRELSCGRGEIPPGLGIRFVAVHRDLYDQSGFFGTGCADRAETMLRARGWRLLARDGPIATYAR
Ga0307297_101637082	3300028754	Soil	RPLSCGRDAVPAELGVRFVVVHRGLYEQSGFFADGCADRAEAALRRAGWRLLARDGSISSWQRP
Ga0247825_100998103	3300028812	Soil	PAPAADRLARELRELSCGRGEIPPGLGIRFVAVHRDLYDQSGFFGTGCADRAETMLRARGWRLLARDGPIATYAR
Ga0302254_100283633	3300028870	Fen	TTAPPAADRLARELRPLSCGRGTIPPRLGIRFVVVHRGLYGQSRFFAPGCPARAEDALRRAGWRLLARDGDVSSWERP
Ga0307314_102035011	3300028872	Soil	LRPLSCGRSTIPAGLGIRFVVVHRGLYEQSGFFAAGCAARAEAALRAGGWHLLARDGAISSWERR
Ga0307497_104805811	3300031226	Soil	YSTTAPPAADRLARQLRPLSCGRGTIPTDLGIRFVVVHRGLYEQSGFFAAGCAARAEAALRRDGWRLLARDGAISSWERP
Ga0311351_107482031	3300031722	Fen	SYSTTAPPAADRLARDLRGLSCGRGSVPTALGVRYVVVHRGVYTQSGFFDPACATAAEARLKELGWTLLARDGAITSWRRP
Ga0310907_100176553	3300031847	Soil	GYSTIAPKRAVGLARELRPLSCGRGTVPADLGIRFVAVHRGLYAQSGFFADGCPERAEAMLRASGWRLLARDGKIATYAR
Ga0315297_100987414	3300031873	Sediment	ADVLARDLRGLSCGRGSIPRALGIRFVTVHRGLYRQSGWFAAGCADAAEAALRRQGWALLARDGAVSSWARPTG
Ga0310900_104582422	3300031908	Soil	IAPKRAVGLARELRPLSCGRGTVPADLGVRFVAVHRGLYAQSGFFAADCPARAEAMLHASGWRLLARDGQIATYTR
Ga0315272_106907211	3300032018	Sediment	AADRLARQLRALSCGRGAIPPGLGVRFVAVHRGLYRQSGWFAADCADRAQASQRRAGWRLLGRDGAISTWKAPS
Ga0310895_100419032	3300032122	Soil	KRAVGLARELRPLSCGRGTVPADLGIRFVAVHRGLYAQSGFFADGCPERAEAMLRASGWRLLARDGKIATYAR
Ga0315292_114610252	3300032143	Sediment	PPAADRLARQLRGLSCGRGSIPSGLGVRFVAVHRGLYRQSGWFAASCADRAEATLLRDGWRLLARDGAISSWAAPR
Ga0315268_114377282	3300032173	Sediment	RSAELLARDLRGISCGRGVLPTALGIRFVVVHRGLYAQSTWFAPGCADAAEAALRSQGWHRLAREGAISSWAR
Ga0310896_103038072	3300032211	Soil	PRRASRLARELRGLSCGRGAIPAGLGVRYVAVHRGLYAQSGFFDASCPARAEAALRRTGWTLVARDGPIAAYARG
Ga0315271_117406202	3300032256	Sediment	STTAPRAADRLARELRAVSCGHGSIPPALGVRFVAVHRGLYSQSGFFAPGCGARAEAALQRAGWKPLARDGAISSWRRP
Ga0247829_104373254	3300033550	Soil	PPAADRLARDLRGLSCGRGEIPPGLGIRFVAVHRGLYDQSGFVGTGCADRAETMLRARGWRLLARDGPIATYAR
Ga0247829_112699282	3300033550	Soil	TVAPGGARRLARELRGLSCGRGSVPPELGVEWVAVHRGLYAQSGFFGASCPARAEAALVAAGWRLVARDGQIATYRRE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078799

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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