Metagenome / Metatranscriptome Family F078783

Basic Information
Family ID	F078783
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	49 residues
Representative Sequence	VSTDVQPPAEADEVASEAAATAAPEVIADSFGEYIKIWWARVRSGD
Number of Associated Samples	107
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.13 %
% of genes near scaffold ends (potentially truncated)	97.41 %
% of genes from short scaffolds (< 2000 bps)	93.97 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Unclassified (53.448 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.345 % of family members)
Environment Ontology (ENVO)	Unclassified (26.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.966 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.95% β-sheet: 0.00% Coil/Unstructured: 54.05%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00005	ABC_tran	95.69
PF02233	PNTB	0.86
PF02653	BPD_transp_2	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
All Organisms	root	All Organisms	46.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
cellular organisms	root	All Organisms → cellular organisms	46.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.45 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	5.17 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3.45 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	3.45 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.86 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	3.45 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.86 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	3.45 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.86 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	3.45 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.86 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.45 %
Stigmatella aurantiaca DW4/3-1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	3.45 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.86 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_143388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	673	Open in IMG/M
3300004152\|Ga0062386_101801590	Not Available	511	Open in IMG/M
3300004470\|Ga0068967_1273309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	554	Open in IMG/M
3300004629\|Ga0008092_10713685	Not Available	646	Open in IMG/M
3300005355\|Ga0070671_100101844	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300005436\|Ga0070713_100763651	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005438\|Ga0070701_10805729	All Organisms → cellular organisms → Bacteria → Terrabacteria group	641	Open in IMG/M
3300005544\|Ga0070686_101678917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	539	Open in IMG/M
3300005546\|Ga0070696_101125997	Not Available	661	Open in IMG/M
3300005591\|Ga0070761_10020264	All Organisms → cellular organisms → Bacteria	3694	Open in IMG/M
3300005591\|Ga0070761_10379656	Not Available	860	Open in IMG/M
3300005712\|Ga0070764_10849430	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300006358\|Ga0068871_100061322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3071	Open in IMG/M
3300006871\|Ga0075434_101366756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	718	Open in IMG/M
3300006881\|Ga0068865_101954835	Not Available	532	Open in IMG/M
3300006953\|Ga0074063_13555886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300007076\|Ga0075435_101094640	Not Available	696	Open in IMG/M
3300009524\|Ga0116225_1323182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	688	Open in IMG/M
3300009672\|Ga0116215_1363525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300010046\|Ga0126384_11560184	All Organisms → cellular organisms → Bacteria → Terrabacteria group	620	Open in IMG/M
3300010154\|Ga0127503_10873715	Not Available	550	Open in IMG/M
3300010361\|Ga0126378_10493481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1340	Open in IMG/M
3300010376\|Ga0126381_105055450	Not Available	505	Open in IMG/M
3300010396\|Ga0134126_11679759	Not Available	697	Open in IMG/M
3300011106\|Ga0151489_1452584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300012359\|Ga0137385_10965170	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300012984\|Ga0164309_11283126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300013296\|Ga0157374_10184761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2038	Open in IMG/M
3300014654\|Ga0181525_10584224	All Organisms → cellular organisms → Bacteria → Terrabacteria group	622	Open in IMG/M
3300014968\|Ga0157379_10997100	Not Available	798	Open in IMG/M
3300014968\|Ga0157379_11098336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300016294\|Ga0182041_10467156	Not Available	1087	Open in IMG/M
3300016357\|Ga0182032_11723109	All Organisms → cellular organisms → Bacteria → Terrabacteria group	547	Open in IMG/M
3300016371\|Ga0182034_10392830	Not Available	1136	Open in IMG/M
3300016422\|Ga0182039_11805463	Not Available	560	Open in IMG/M
3300016445\|Ga0182038_11621565	All Organisms → cellular organisms → Bacteria → Terrabacteria group	582	Open in IMG/M
3300017937\|Ga0187809_10332729	All Organisms → cellular organisms → Bacteria → Terrabacteria group	566	Open in IMG/M
3300017955\|Ga0187817_10907875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300017973\|Ga0187780_11250587	Not Available	545	Open in IMG/M
3300017993\|Ga0187823_10175455	Not Available	690	Open in IMG/M
3300018060\|Ga0187765_10302207	Not Available	960	Open in IMG/M
3300018062\|Ga0187784_10388883	Not Available	1128	Open in IMG/M
3300018064\|Ga0187773_10378780	Not Available	813	Open in IMG/M
3300018086\|Ga0187769_10900244	Not Available	669	Open in IMG/M
3300019361\|Ga0173482_10658636	Not Available	535	Open in IMG/M
3300020070\|Ga0206356_11033248	Not Available	677	Open in IMG/M
3300020582\|Ga0210395_10244827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1347	Open in IMG/M
3300020582\|Ga0210395_10784899	Not Available	711	Open in IMG/M
3300021171\|Ga0210405_10037262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3878	Open in IMG/M
3300021178\|Ga0210408_11151696	All Organisms → cellular organisms → Bacteria → Terrabacteria group	594	Open in IMG/M
3300021180\|Ga0210396_11338608	All Organisms → cellular organisms → Bacteria → Terrabacteria group	594	Open in IMG/M
3300021402\|Ga0210385_10567598	Not Available	864	Open in IMG/M
3300021477\|Ga0210398_10562069	Not Available	927	Open in IMG/M
3300021478\|Ga0210402_10646005	Not Available	979	Open in IMG/M
3300021560\|Ga0126371_13231470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300022513\|Ga0242667_1012473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	798	Open in IMG/M
3300022529\|Ga0242668_1131982	All Organisms → cellular organisms → Bacteria → Terrabacteria group	535	Open in IMG/M
3300024181\|Ga0247693_1028604	Not Available	764	Open in IMG/M
3300025504\|Ga0208356_1036388	Not Available	1011	Open in IMG/M
3300025906\|Ga0207699_10202823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1345	Open in IMG/M
3300025921\|Ga0207652_11251242	All Organisms → cellular organisms → Bacteria → Terrabacteria group	644	Open in IMG/M
3300025921\|Ga0207652_11853336	Not Available	508	Open in IMG/M
3300025931\|Ga0207644_10059460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2764	Open in IMG/M
3300025931\|Ga0207644_10286502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1324	Open in IMG/M
3300025931\|Ga0207644_11642034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300025938\|Ga0207704_11640573	Not Available	552	Open in IMG/M
3300025944\|Ga0207661_11131251	Not Available	721	Open in IMG/M
3300026067\|Ga0207678_10565331	Not Available	995	Open in IMG/M
3300026489\|Ga0257160_1022493	Not Available	1002	Open in IMG/M
3300027031\|Ga0208986_1016796	Not Available	740	Open in IMG/M
3300027064\|Ga0208724_1007941	Not Available	999	Open in IMG/M
3300027096\|Ga0208099_1011327	Not Available	1188	Open in IMG/M
3300027775\|Ga0209177_10318256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300028718\|Ga0307307_10173419	Not Available	678	Open in IMG/M
3300028773\|Ga0302234_10182635	Not Available	909	Open in IMG/M
3300030531\|Ga0210274_1672321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300030532\|Ga0210290_1570502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300030545\|Ga0210271_10049198	Not Available	914	Open in IMG/M
3300030659\|Ga0316363_10205496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	819	Open in IMG/M
3300030707\|Ga0310038_10217126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903	Open in IMG/M
3300031184\|Ga0307499_10143745	Not Available	694	Open in IMG/M
3300031231\|Ga0170824_108610298	Not Available	838	Open in IMG/M
3300031469\|Ga0170819_14348039	All Organisms → cellular organisms → Bacteria → Terrabacteria group	641	Open in IMG/M
3300031474\|Ga0170818_104656835	Not Available	540	Open in IMG/M
3300031680\|Ga0318574_10400389	Not Available	802	Open in IMG/M
3300031681\|Ga0318572_10316616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	923	Open in IMG/M
3300031724\|Ga0318500_10555702	Not Available	579	Open in IMG/M
3300031768\|Ga0318509_10754227	All Organisms → cellular organisms → Bacteria → Terrabacteria group	539	Open in IMG/M
3300031797\|Ga0318550_10620826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300031805\|Ga0318497_10297986	Not Available	898	Open in IMG/M
3300031835\|Ga0318517_10216388	Not Available	864	Open in IMG/M
3300031845\|Ga0318511_10307630	Not Available	717	Open in IMG/M
3300031894\|Ga0318522_10291585	Not Available	619	Open in IMG/M
3300031896\|Ga0318551_10097298	Not Available	1562	Open in IMG/M
3300031981\|Ga0318531_10366184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	652	Open in IMG/M
3300032009\|Ga0318563_10499105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300032041\|Ga0318549_10363921	Not Available	652	Open in IMG/M
3300032043\|Ga0318556_10519372	Not Available	623	Open in IMG/M
3300032043\|Ga0318556_10567834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300032055\|Ga0318575_10432650	All Organisms → cellular organisms → Bacteria → Terrabacteria group	668	Open in IMG/M
3300032063\|Ga0318504_10348819	Not Available	703	Open in IMG/M
3300032067\|Ga0318524_10366247	Not Available	749	Open in IMG/M
3300032090\|Ga0318518_10706869	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	512	Open in IMG/M
3300032091\|Ga0318577_10222198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca → Stigmatella aurantiaca DW4/3-1	904	Open in IMG/M
3300032094\|Ga0318540_10238122	Not Available	878	Open in IMG/M
3300032174\|Ga0307470_11597499	Not Available	545	Open in IMG/M
3300032261\|Ga0306920_102358303	Not Available	736	Open in IMG/M
3300032770\|Ga0335085_11028160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300032805\|Ga0335078_11014216	Not Available	981	Open in IMG/M
3300032898\|Ga0335072_11811946	Not Available	503	Open in IMG/M
3300032954\|Ga0335083_11372616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300033289\|Ga0310914_10359974	Not Available	1316	Open in IMG/M
3300033289\|Ga0310914_10948962	Not Available	760	Open in IMG/M
3300033289\|Ga0310914_11047261	Not Available	716	Open in IMG/M
3300033290\|Ga0318519_10422977	Not Available	795	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.79%
Host-Associated	Host-Associated	11.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.62%
Plants	Host-Associated → Plants	11.21%
Aquatic	Environmental → Aquatic	5.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.62%
Freshwater	Environmental → Aquatic → Freshwater	5.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Peat	Environmental → Terrestrial → Peat	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.93%
Loam	Environmental → Terrestrial → Soil → Loam	12.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.86%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.86%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004470	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027031	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300030531	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030532	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE108SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02342110	2199352025	Soil	VSTDVQPPAEADEIASEAAATAAPEVIADSLGEYIKIWWARVRSGDSGALPVL
Ga0062386_1018015901	3300004152	Bog Forest Soil	VSTEVEEPPSEATDADEVASEAAAVAAPDVIADSLGEYAKLWVARVRSGDS
Ga0068967_12733093	3300004470	Peatlands Soil	VSTEVEEPPSEAAEADELASEAAAVAAPDVIADSLGEYLKLWLARV
Ga0008092_107136852	3300004629	Tropical Rainforest Soil	VSTDVQPPAEADEIASEAAATAAPEVIADSFGEYVKIWWARVRSGDSGALPV
Ga0070671_1001018443	3300005355	Switchgrass Rhizosphere	VSTDVQPPGADEVAAQAATGAAPDVMADSFSEYVKIWWTRVR
Ga0070713_1007636511	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSTDVQPSADADDIASEAAAAAAPEVIADSLGEYIKIWWARVRSGDSGALPVLLGLVAIV
Ga0070701_108057292	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VSTDVQPPAEADEIASGAAATAAPEVIADSLGEYLKIWWARVR
Ga0070686_1016789171	3300005544	Switchgrass Rhizosphere	VSTDVQPPAEADEIASGAAATAAPEVIADSLGEYIKIWWARVRSGDSGALPVL
Ga0070696_1011259972	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VSTDVQPPSEAADEEVAAQTAATAAPEVIADSFGEYAKIWWTRVRSGDSGALP
Ga0070761_100202645	3300005591	Soil	VSTETREPHRDTGDADEVAAEAAAAAANPEIIADSFGEYAKIWLVRVRSGDSGFLPVLLGLVAIV
Ga0070761_103796562	3300005591	Soil	VSTDVQEPHHDAAESDEIAADAAAGANPEIIADSFGEY
Ga0070764_108494302	3300005712	Soil	VSTDVQEPHHDAAESDEIAADAAAGANPEIIADSFGEYVKIWLVRVRSGDSGFLPVLLGLVAIVIYFQ
Ga0068871_1000613224	3300006358	Miscanthus Rhizosphere	VSTDVQPPAEADEIASGAAATAAPEVIADSLGEYIKIWWARVRSGDSGALP
Ga0075434_1013667561	3300006871	Populus Rhizosphere	VSTDVQPPAEASDEVAAQAAATAAPEVIADSFGEYAKIWWTRVRSGDSGALPVILGL
Ga0068865_1019548352	3300006881	Miscanthus Rhizosphere	VSTDVQPPGADEVAAQAATGAAPDVMADSFSEYVKIWWIR
Ga0074063_135558861	3300006953	Soil	VSTDVQPPAEADEIASEAAATAAPEVIANSLGEYIKIWWARVRSGDSGALPVLLGLVA
Ga0075435_1010946402	3300007076	Populus Rhizosphere	VSTDVDQPPPGADEAADLTAATAAPEVIADSLGEYVKIWWTR
Ga0116225_13231821	3300009524	Peatlands Soil	TDVQGPPPEATETPEEIASEVALAPPEVIADSLGE*
Ga0116215_13635252	3300009672	Peatlands Soil	VSTEVEEPPSEAADADVIASEAAAVAAPDVLADSLGEYAKLWLARVRSGDSGFLPVLLGLVAIVIYFQAR
Ga0126384_115601841	3300010046	Tropical Forest Soil	VSTDVQPPAEASDEVAAQTAATAAPEVMADSFGEYAKIWWTRVRSGDS
Ga0127503_108737151	3300010154	Soil	VSTDVQPPSEAADEEVAAQTAATAAPEVIADSFGEYAKIWWTRVRSGDSGALPVI
Ga0126378_104934811	3300010361	Tropical Forest Soil	VSTDVQQPPPEADEFAAQTAGTTAPEVIADTFGEYAKIWWARVRSGESGA
Ga0126381_1050554501	3300010376	Tropical Forest Soil	VSTDVQQPPPEADELAAQTAGTTAPEVIADTFGEYAKIWWARVRSGESG
Ga0134126_116797591	3300010396	Terrestrial Soil	VSTDVQPPAEADEIASGAAATAAPEVIADSLGEYIKIW
Ga0151489_14525842	3300011106	Soil	VSTDVQPPAEADEIASGAAATAAPEVIADSLGEYIKIWWARVRSGDSGALPVLLGLI
Ga0137385_109651703	3300012359	Vadose Zone Soil	VSSDVKQPPAEADGIASAVAAVAAPEVLADSFGEYVKIWWTRIRGGDSGALPVLLGLIAI
Ga0164309_112831261	3300012984	Soil	VSTDVQPPAEADEVASDAAAASAAPEVIADSFGEYVKIWWARVRSGDSGALPVLLGLVAIVVY
Ga0157374_101847611	3300013296	Miscanthus Rhizosphere	VSTDVQPPSEAADEEIAAQTAATAAPEVIADSFGEYAKIWWTRVRSGDSGALPVI
Ga0181525_105842242	3300014654	Bog	VSTDVHEPAPDAADPEEITSEVALAPPDVIADSLGEY
Ga0157379_109971002	3300014968	Switchgrass Rhizosphere	VSTDVQPPAEADEIASGAAATAAPEVIADSLGEYI
Ga0157379_110983361	3300014968	Switchgrass Rhizosphere	VSTDVQPPAEADEVASDAAAASAAPEVIADSFGEYVKIWWARVRSGDSGALPVLLGLVAI
Ga0182041_104671561	3300016294	Soil	MSTELQPPPSEAAEEAELATQTAATAAPDVIADSFGEYVKIWWTRVRGGESGAL
Ga0182032_117231091	3300016357	Soil	VSTELQPPPAEAAEDAELATQTAATAAPEVIADTFGEYVKI
Ga0182034_103928302	3300016371	Soil	MSTELQPPPSEAAEEAELATQSAATAAPDVIADSFGEYVKIWWTRVRGGES
Ga0182039_118054631	3300016422	Soil	VSTDVQPPPEAADEEVAAQAASTAAPEVMADSFGEYAKIWWTR
Ga0182038_116215651	3300016445	Soil	MSTELQPPPSEAAEEAELATQTAATAAPEVIADTFG
Ga0187809_103327292	3300017937	Freshwater Sediment	VSTDVQPPAEADEVASEAAATAAPEVIADSFGEYIKIWWARVRSGD
Ga0187817_109078752	3300017955	Freshwater Sediment	VSTEVREPHGDAPDSDEIASEAAAAANPEIIADSFGEYAKIWLVRVRSGDSGFLPVLLGLVAIVIYFQAR
Ga0187780_112505871	3300017973	Tropical Peatland	MSTEVQPPASEAAEDAELATQTAAASAPDVIADSFGEYVKIW
Ga0187823_101754551	3300017993	Freshwater Sediment	VSADVQPPPEAADEVAAQTASTAAPEVMADTFGEYAKIWWTRVRSGDSGALPVILG
Ga0187765_103022071	3300018060	Tropical Peatland	VSTDVQPPAEADEIASGAAATAAPEVIADSLGEYIKIWWA
Ga0187784_103888831	3300018062	Tropical Peatland	VSTEVDPTPGTTAEADEIASEAAAAAAPEVIADSLGEYVKIWWARVRGGES
Ga0187773_103787801	3300018064	Tropical Peatland	VSTDVQPPPETADEEVAAQAASAAAPEVMADSFGEYAKIWWTR
Ga0187769_109002442	3300018086	Tropical Peatland	VSTEVQPPPEAAEDAELASEAAATAAPEVIADSFGEYVKIWWARV
Ga0173482_106586362	3300019361	Soil	VSTDVQPPGADEVAAQAATGAAPDVMADSFSEYVK
Ga0206356_110332481	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VSTDVQPPGADEVAAQAATGAAPDVMADSFSEYVKIWWIRVRNG
Ga0210395_102448271	3300020582	Soil	VSTELHQPPPEALDQAAAEEAARVAPPEIIAGSLGEYAKIWWTRVRSGDSGALPVVIGLIAIV
Ga0210395_107848992	3300020582	Soil	VSTDVQPPADADEIASGAAATAAPEVIADSLGEYIKIWWARVRSG
Ga0210405_100372624	3300021171	Soil	VSTDVQEPHHDAAESDEIAADAAAGANPEIIADSFGEYVKIWLVRVRSGDSGFLPVLLGLVAIVIY
Ga0210408_111516961	3300021178	Soil	VSTDVQPPAEAADDEVAEQTAAAAAPEVIADTFGEYAKIWWNRVRS
Ga0210396_113386081	3300021180	Soil	VSTDVQEPPPEATEPDEEVGSEAALAAPEVIADSLGEYVK
Ga0210385_105675981	3300021402	Soil	VSTDVQPPAEADEIASEAAATAAPEVIADSLGEYIKIWWARV
Ga0210398_105620691	3300021477	Soil	VSTDVQEPPPEATEPDEEVGSEAALAAPEVIADSLGEYVKIWISRI
Ga0210402_106460052	3300021478	Soil	VSTDVQPSAEADDIASEAAATAAPEVIADSLGEYIKIWWARVRSGDSGA
Ga0126371_132314702	3300021560	Tropical Forest Soil	VSTDVQPPAEADEIASEAAATAAPEVIADSFGEYVKIWWARVRSGDSGALPVLLGLVAIVIYFQAR
Ga0242667_10124732	3300022513	Soil	VSTDVQPPAEADDIASEAAATAAPEVIADSLGEYIKIWWARVRSGDSGALPVLLGLVAIV
Ga0242668_11319821	3300022529	Soil	VSTDVQPPADADEIASGAAATAAPEVIADSLGEYIKIWWARVRS
Ga0247693_10286041	3300024181	Soil	VSTDVQPPPEAADEEIAAQTAAAAAPEVIADSFGEYAK
Ga0208356_10363881	3300025504	Arctic Peat Soil	VSTDVQEPPDAPESDDISELAAVAPPEVIADSLGE
Ga0207699_102028231	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSTDVQPPAEADEVASDAAAASAAPEVIADSFGEYVKIWWARVRSGDSGALPVLLGLVAIVVYFQVRSSLFLS
Ga0207652_112512422	3300025921	Corn Rhizosphere	VSTDVQPPAEADEVASGAAAASAAPEVIADSFGEYVKIW
Ga0207652_118533361	3300025921	Corn Rhizosphere	VSTDVQPPGADEVAAQAATGAAPDVMADSFSEYVKIWWTRVRNGESGAL
Ga0207644_100594604	3300025931	Switchgrass Rhizosphere	VSTDVQPPGADEVAAQAATGAAPDVMADSFSEYVKIWWTRVRSG
Ga0207644_102865022	3300025931	Switchgrass Rhizosphere	VSTDVQPPSEAADEEVAAQTAATAAPEVIADSFGE
Ga0207644_116420342	3300025931	Switchgrass Rhizosphere	VSTDVQPPAEADEIASGAAATAAPEVIADSLGEYIKIWWARVRSGDSGALPVLLGLVAIVVY
Ga0207704_116405732	3300025938	Miscanthus Rhizosphere	VSTDVQPPGADEVAAQAATGAAPDVMADSFSEYVKIWWIRVRNGES
Ga0207661_111312512	3300025944	Corn Rhizosphere	VSTDVQPPAEADEIASGAAATAAPEVIADSLGEYLKIW
Ga0207678_105653311	3300026067	Corn Rhizosphere	VSTDVQPPSEAADEEVAAQTAAAAAPEVIADSFGEYAK
Ga0257160_10224931	3300026489	Soil	VSTDVQPPSEAADEEVAAQAAATAAPEVIADSFGEYAKIWWTRVRSGDSG
Ga0208986_10167961	3300027031	Forest Soil	VSTDVQPPAEADEVASGAAATAAPEVIADSLGEYIKIW
Ga0208724_10079412	3300027064	Forest Soil	VSTDVQEPHRDAAETDEIAAGAAASAAPEVIADNFGEYVKIW
Ga0208099_10113272	3300027096	Forest Soil	VSTDVQEPHRDAAETDEIAAGAAASAAPEVIADNFGEYVKIWLARVR
Ga0209177_103182562	3300027775	Agricultural Soil	VSTDVQPPTEADEIASGAAATAAPEVIADSLGEYIKIWWARVRSGDSGALPVLLGLVAIVVYFQVR
Ga0307307_101734192	3300028718	Soil	VSTDVQPPGADEVAAQTAATAAPEVIADSFGEYVKIWWTRVRSGES
Ga0302234_101826351	3300028773	Palsa	VSTDVQGPSPEATEPDEEIASEVALAAPEVMADSLGEYAKIW
Ga0210274_16723211	3300030531	Soil	VSTEVREPHGDAADSDEIAAEAAAAANPEIIADSFGEYAKIWLTRVRSGDSGFLPVLLGLVAIVIYFQA
Ga0210290_15705022	3300030532	Soil	VSTEVREPHGDAADSDEIAAEAAAAANPEIIADSFGEYAKIWLTRVRSGDSGFLPVLLGLVAIVIYFQARNSLFLRISMIR
Ga0210271_100491981	3300030545	Soil	VSTDVQHEAAEPEEIASEVALAAPDVIADSLGEYVKI
Ga0316363_102054961	3300030659	Peatlands Soil	VSTEVEEPPSDAAEADEIASEAAAVAAPDVIADSLGEYVKLWLARVRGGESGALPVLL
Ga0310038_102171263	3300030707	Peatlands Soil	VSTEVEEPPSEAADADVIASEAAAVAAPDVIADSLGEYAKLWLARVRGGDSGALPVLLGLVAI
Ga0265461_131062702	3300030743	Soil	VSTDVQGPPPEADPDEVASEVALAAPDVIADSLGEYVKIWISRVR
Ga0307499_101437451	3300031184	Soil	VSTDVQPPGADEVAAQAATGAAPDVMADSFSEYVKIWWTRVRNGESGALP
Ga0170824_1086102982	3300031231	Forest Soil	VSTDVQPPAEADEVASEAAATAAPEVIADSLGEYIK
Ga0170819_143480391	3300031469	Forest Soil	VSTDVQPSAEADDIASEAAATAAPEVIADSLGEYIRIWWARVRSGDSG
Ga0170818_1046568351	3300031474	Forest Soil	VSTDVQPPPSESAEEAELAEQTAATAAPEVIADSFGEYVKIWWARVRSGENGALPVIL
Ga0318574_104003891	3300031680	Soil	VSTELQQPSAEAAEEAELATQTAATAAPEVIADTFGEYVKIWWARVRGGESGA
Ga0318572_103166162	3300031681	Soil	VSTDVQPPPEAADEEVAAQAASTAAPEVMADSFGEYAK
Ga0318500_105557021	3300031724	Soil	VSTELQPPPAEAAEDAELATQTAATAAPEVIADTFGEYVKIWWARVRG
Ga0318509_107542272	3300031768	Soil	VSTEVQPPAEADELASEAAATAAPEVIADSLGEYV
Ga0318550_106208261	3300031797	Soil	VSTEVQPPAEADELASEAAATAAPEVIADTLGEYVKIWWARVRSGDSGALPVLLG
Ga0318497_102979861	3300031805	Soil	VSTEVQPPAEADELASEAAATAAPEVIADTLGEYVK
Ga0318517_102163882	3300031835	Soil	MSTELQPPPSEAAEEAELATQSAATAAPDVIADSFGEYVKIWWTRVRG
Ga0318511_103076302	3300031845	Soil	MSTELQPPPSEAAEEAELATQTAATAAPDVIADSFGEYVKIWWTRVR
Ga0318522_102915852	3300031894	Soil	VSTDVQPPPEAADEEVAAQAASAAAPEVMADTFGEYVKIWWTRVRSGDSGA
Ga0318551_100972981	3300031896	Soil	VSTELQPPPAEAAEDAELATQTAATAAPEVIADTFGEYVKIWWARVRGGES
Ga0318531_103661841	3300031981	Soil	VSTDVQPPPEAADEEVAAQAASAAPEVMADTFGEYVKIWWTRVRSGDSGA
Ga0318563_104991052	3300032009	Soil	VSTEVQPPPEADEVASEAAATAAPEVIADSFGEYVKIWWARVRSGDSGALPVLLGLVAIVIYFQARSAQFL
Ga0318549_103639212	3300032041	Soil	VSTDIQQPPPDADEVAAQTAAIGAPEVIADSFGEYI
Ga0318556_105193722	3300032043	Soil	MSTELQPPPSEAAEEAELATQSAATAAPDVIADSFGEYVKIWWARVR
Ga0318556_105678342	3300032043	Soil	VSTEVQPPAEADELASEAAATAAPEVIADTLGEYVKIWWARVRSGDSGALPVLLGLAAIVIYFQARSS
Ga0318575_104326501	3300032055	Soil	MSTELQPPPSEAAEEAELATQSAATAAPDVIADSFGEYVKIWWTRV
Ga0318504_103488192	3300032063	Soil	VSTDVQPPPEAADEEVAAQAASAAPEVMADTFGEYVKI
Ga0318524_103662472	3300032067	Soil	MSTELQPPPSEAAEEAELATQSAATAAPDVIADSFGEYVKIW
Ga0318518_107068692	3300032090	Soil	VSTDVQPPPEAADEEVAAQAASAAPEVMADTFGEYVKIW
Ga0318577_102221981	3300032091	Soil	VSTDVQPPAEADEIASEAAATAAPEVIADSFGEYVKIW
Ga0318540_102381222	3300032094	Soil	VSTDVQPPPEAADEEVAAQAASAAAPEVMADTFGEYVKIWWTRIRSGDS
Ga0307470_115974991	3300032174	Hardwood Forest Soil	VSTDVQPPSEAADEEVAAQTAATAAPEVIADSFGEYAKIWWTRVRSGDSGA
Ga0306920_1023583032	3300032261	Soil	VSTELQPPPAEAAEEAELAAQTAATAAPEVIADTFGEYVKIWWARVRG
Ga0335085_110281601	3300032770	Soil	VSTDVQPPAEADEIASDAAATAAPEVIADSFGEYVKIWWARVRSGDSGALPVLLGLVAIVIYF
Ga0335078_110142161	3300032805	Soil	VSTDVQPPAEADEVASDAAATAAPEVIADSFGEYVKIWW
Ga0335072_118119461	3300032898	Soil	VSTDVQSPSSEPAGANDEPASQAAATGAPEVMANSFGEYVKIWWARVRNGESG
Ga0335083_113726161	3300032954	Soil	VSTDVQPPAEADEIASGAAATAAPEVIADSLGEYIKIWWARVRSGDSGALPVLLGLVAIVVYFQVRSSLFLS
Ga0310914_103599742	3300033289	Soil	MSTELQPPPSEAAEEAELATQTAATAAPDVIADSFGEYVKIWWT
Ga0310914_109489621	3300033289	Soil	VSTEVQPPAEADELASEAAATAAPEVIADSLGEYVKIWWARVRSGDSGALP
Ga0310914_110472611	3300033289	Soil	VSTDVQPPPEAADEEVAAQAASAAPEVMADTFGEYVK
Ga0318519_104229772	3300033290	Soil	VSTELQPPPAEAAEDAELATQTAATAAPEVIADTFGEYVKIWWARVRGG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078783

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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