NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F078702

Metagenome / Metatranscriptome Family F078702

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F078702
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 77 residues
Representative Sequence SWNGNPLGLQLVVDSNFAAKTMIITRVGQGSGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAISGMIRKITQA
Number of Associated Samples 102
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 0.86 %
% of genes near scaffold ends (potentially truncated) 97.41 %
% of genes from short scaffolds (< 2000 bps) 87.93 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Duplodnaviria (77.586 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(18.103 % of family members)
Environment Ontology (ENVO) Unclassified
(43.103 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(56.897 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 4.67%    β-sheet: 0.00%    Coil/Unstructured: 95.33%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.20
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF01844HNH 0.86
PF08774VRR_NUC 0.86



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.59 %
UnclassifiedrootN/A22.41 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001213|JGIcombinedJ13530_106650984All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes648Open in IMG/M
3300002276|B570J29586_1005337All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1249Open in IMG/M
3300002404|B570J29591_1018775All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage513Open in IMG/M
3300002835|B570J40625_100235476All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1930Open in IMG/M
3300003616|JGI25928J51866_1118661All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage552Open in IMG/M
3300004240|Ga0007787_10376675All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes706Open in IMG/M
3300005527|Ga0068876_10091082All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1824Open in IMG/M
3300005581|Ga0049081_10252297Not Available619Open in IMG/M
3300005582|Ga0049080_10096097All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1009Open in IMG/M
3300005583|Ga0049085_10201913All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage660Open in IMG/M
3300005758|Ga0078117_1064785All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4333Open in IMG/M
3300006030|Ga0075470_10131979All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes736Open in IMG/M
3300006484|Ga0070744_10125583All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes739Open in IMG/M
3300006484|Ga0070744_10236856Not Available517Open in IMG/M
3300006641|Ga0075471_10620300Not Available530Open in IMG/M
3300006802|Ga0070749_10334399All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes844Open in IMG/M
3300006803|Ga0075467_10323124All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes817Open in IMG/M
3300006805|Ga0075464_10927108All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes544Open in IMG/M
3300006917|Ga0075472_10512235Not Available597Open in IMG/M
3300006920|Ga0070748_1172736All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes797Open in IMG/M
3300006920|Ga0070748_1286299All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage587Open in IMG/M
3300007169|Ga0102976_1004648All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2385Open in IMG/M
3300007234|Ga0075460_10140406All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes847Open in IMG/M
3300007234|Ga0075460_10291439Not Available537Open in IMG/M
3300007276|Ga0070747_1148667All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes843Open in IMG/M
3300007344|Ga0070745_1104148All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1107Open in IMG/M
3300007363|Ga0075458_10107445Not Available868Open in IMG/M
3300007520|Ga0105054_10518404All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage960Open in IMG/M
3300007538|Ga0099851_1311425Not Available554Open in IMG/M
3300007597|Ga0102919_1241973Not Available563Open in IMG/M
3300007606|Ga0102923_1191675Not Available636Open in IMG/M
3300007734|Ga0104986_1120All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage11023Open in IMG/M
3300008055|Ga0108970_10538691Not Available627Open in IMG/M
3300008108|Ga0114341_10185648All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1176Open in IMG/M
3300008266|Ga0114363_1082698All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1828Open in IMG/M
3300008266|Ga0114363_1220578Not Available562Open in IMG/M
3300008450|Ga0114880_1114599All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1021Open in IMG/M
3300009009|Ga0105105_10502881All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes693Open in IMG/M
3300009158|Ga0114977_10650616Not Available564Open in IMG/M
3300010354|Ga0129333_10906967Not Available745Open in IMG/M
3300010370|Ga0129336_10262920Not Available967Open in IMG/M
3300010885|Ga0133913_10400556All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3627Open in IMG/M
3300011009|Ga0129318_10112688All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes791Open in IMG/M
3300011183|Ga0136713_1031841Not Available683Open in IMG/M
3300011184|Ga0136709_1048503Not Available589Open in IMG/M
3300012013|Ga0153805_1085330All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage536Open in IMG/M
3300012734|Ga0157615_1057259All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes559Open in IMG/M
3300013004|Ga0164293_10703788Not Available647Open in IMG/M
3300013004|Ga0164293_10958838Not Available536Open in IMG/M
3300013005|Ga0164292_10860614Not Available570Open in IMG/M
(restricted) 3300013126|Ga0172367_10038997All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3975Open in IMG/M
(restricted) 3300013131|Ga0172373_10383572All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes880Open in IMG/M
(restricted) 3300013132|Ga0172372_10360993All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1008Open in IMG/M
(restricted) 3300013138|Ga0172371_10737283All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes662Open in IMG/M
3300013372|Ga0177922_10581006All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage872Open in IMG/M
3300016776|Ga0182046_1247227All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes736Open in IMG/M
3300017701|Ga0181364_1021340All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1064Open in IMG/M
3300017736|Ga0181365_1012976All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2081Open in IMG/M
3300017736|Ga0181365_1154805All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage542Open in IMG/M
3300017761|Ga0181356_1212976All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage566Open in IMG/M
3300017766|Ga0181343_1089423All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes879Open in IMG/M
3300017777|Ga0181357_1079390All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1256Open in IMG/M
3300017780|Ga0181346_1030322All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2243Open in IMG/M
3300017780|Ga0181346_1157405All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes846Open in IMG/M
3300017780|Ga0181346_1279595Not Available573Open in IMG/M
3300017785|Ga0181355_1171824All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage865Open in IMG/M
3300017785|Ga0181355_1251630All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage677Open in IMG/M
3300019784|Ga0181359_1131046All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage884Open in IMG/M
3300020157|Ga0194049_1152590Not Available626Open in IMG/M
3300020172|Ga0211729_11019898All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage869Open in IMG/M
3300020506|Ga0208091_1004914All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1825Open in IMG/M
3300021956|Ga0213922_1070319All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage741Open in IMG/M
3300021962|Ga0222713_10544210Not Available687Open in IMG/M
3300022190|Ga0181354_1057040All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1299Open in IMG/M
3300022190|Ga0181354_1145697All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage744Open in IMG/M
3300024506|Ga0255168_1025557All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1020Open in IMG/M
3300024848|Ga0255229_1046783Not Available744Open in IMG/M
3300025635|Ga0208147_1065645All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage911Open in IMG/M
3300025848|Ga0208005_1131753All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes780Open in IMG/M
3300025872|Ga0208783_10090197All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1352Open in IMG/M
3300025896|Ga0208916_10043162All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1838Open in IMG/M
3300025896|Ga0208916_10160999All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage966Open in IMG/M
3300025896|Ga0208916_10293361All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes708Open in IMG/M
3300027121|Ga0255074_1012482All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1122Open in IMG/M
3300027129|Ga0255067_1016891All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1089Open in IMG/M
3300027133|Ga0255070_1005972All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2274Open in IMG/M
3300027155|Ga0255081_1049226All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes881Open in IMG/M
3300027486|Ga0255086_1044668All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes719Open in IMG/M
3300027492|Ga0255093_1041716All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes913Open in IMG/M
3300027529|Ga0255077_1000152All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage10524Open in IMG/M
3300027608|Ga0208974_1062306All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1049Open in IMG/M
3300027688|Ga0209553_1036163All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2024Open in IMG/M
3300027832|Ga0209491_10229955All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1541Open in IMG/M
3300027900|Ga0209253_10934243All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes605Open in IMG/M
3300027963|Ga0209400_1315036All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes593Open in IMG/M
3300027976|Ga0209702_10140942All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1075Open in IMG/M
3300027983|Ga0209284_10590644All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage520Open in IMG/M
3300028255|Ga0255226_1040822Not Available603Open in IMG/M
3300028394|Ga0304730_1018839All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3794Open in IMG/M
3300031746|Ga0315293_10276951All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1354Open in IMG/M
3300031857|Ga0315909_10899397All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes546Open in IMG/M
3300031951|Ga0315904_10669760All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes878Open in IMG/M
3300031951|Ga0315904_10713683All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage841Open in IMG/M
3300031963|Ga0315901_10306536All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1313Open in IMG/M
3300031999|Ga0315274_11727261Not Available579Open in IMG/M
3300032093|Ga0315902_10133484All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2618Open in IMG/M
3300032093|Ga0315902_10318065All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1460Open in IMG/M
3300032462|Ga0335396_10494595All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage776Open in IMG/M
3300033996|Ga0334979_0172690All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1292Open in IMG/M
3300034012|Ga0334986_0359662All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes752Open in IMG/M
3300034092|Ga0335010_0092770All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2032Open in IMG/M
3300034103|Ga0335030_0571836All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes699Open in IMG/M
3300034104|Ga0335031_0293635All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1060Open in IMG/M
3300034120|Ga0335056_0682084Not Available522Open in IMG/M
3300034356|Ga0335048_0011658All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6487Open in IMG/M
3300034418|Ga0348337_173503All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes574Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous18.10%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake15.52%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater12.93%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater8.62%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater5.17%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater4.31%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater3.45%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic3.45%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.45%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton2.59%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.59%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.59%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.72%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.72%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.72%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.72%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.72%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.86%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.86%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.86%
Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water0.86%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.86%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.86%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.86%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.86%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.86%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary0.86%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300002276Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion nsEnvironmentalOpen in IMG/M
3300002404Freshwater microbial communities from Lake Mendota, WI - 22APR2009 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003616Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DNEnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300005758Cyanobacteria communities in tropical freswater systems - freshwater lake in SingaporeEnvironmentalOpen in IMG/M
3300006030Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300006917Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007169Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projectsEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007520Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007597Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02EnvironmentalOpen in IMG/M
3300007606Estuarine microbial communities from the Columbia River estuary - metaG 1569-02EnvironmentalOpen in IMG/M
3300007734Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015JanEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009009Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011009Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNAEnvironmentalOpen in IMG/M
3300011183Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - JTO22cm metaGEnvironmentalOpen in IMG/M
3300011184Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaGEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300012734Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES144 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300013138 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300016776Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011505AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020157Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25mEnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020506Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021956Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MGEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300024506Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8dEnvironmentalOpen in IMG/M
3300024848Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025635Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025848Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025872Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027121Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8hEnvironmentalOpen in IMG/M
3300027129Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8hEnvironmentalOpen in IMG/M
3300027133Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepB_8hEnvironmentalOpen in IMG/M
3300027155Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8hEnvironmentalOpen in IMG/M
3300027486Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_8dEnvironmentalOpen in IMG/M
3300027492Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8dEnvironmentalOpen in IMG/M
3300027529Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8hEnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027688Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027832Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027963Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027976Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)EnvironmentalOpen in IMG/M
3300027983Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03 (SPAdes)EnvironmentalOpen in IMG/M
3300028255Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028394Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032462Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (spades assembly)EnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034092Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069EnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M
3300034104Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120EnvironmentalOpen in IMG/M
3300034120Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172EnvironmentalOpen in IMG/M
3300034356Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_10665098423300001213WetlandGNATSWNGNPLGLQLVVDSNFAAKTMIITRVGQGSGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAISGMIRKITQA*
B570J29586_100533713300002276FreshwaterATSWNGTPLGLQLVVDSNFADKTMIITRVGQGQGDAYEFYESIQGLLSVDTPATLGKTMSFHGYVSTFAAIGGMIRKITQA*
B570J29591_101877513300002404FreshwaterLGLQLVVDSNFADKTMIITRVGQGQGDAYEFYESIQGLLSVDTPATLGKTMSFHGYVSTFAAIGGMIRKITQA*
B570J40625_10023547613300002835FreshwaterSWNGTPLGLQLVVDSNFADKTMIITRVGQGQGDAYEFYESIQGLLSVDTPATLGKTMSFHGYVSTFAAIGGMIRKITQA*
JGI25928J51866_111866113300003616Freshwater LakeATSWNGTPLGLQLVVDSNFAGKTMIITRVGQGQGDAFEFYEQIRGLMSVEVPSTLGRTMSXYGYVSTFAAISGMIRKITQA*
Ga0007787_1037667523300004240Freshwater LakeGLQLVVDSNFAAKTMIITRVGAGSGDAFEFFESIRGLQSLEAPAVLGRTMSFHGFVSTFAAIPGMIRKITQA*
Ga0068876_1009108213300005527Freshwater LakeEIVVDSNFAAKTMIITNSQKAFEFYESVRGLTSVEVPSTLGRTFSFHGYVSTFAAVSGMIRKITQA*
Ga0049081_1025229713300005581Freshwater LenticVDSNFAAKTMIITRVGQGAGDAFEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAIGGMIRKITQA*
Ga0049080_1009609713300005582Freshwater LenticATTWVGSNPLGLEIVVDSNFAAKTMIVTNASKAFEYYESVRGILSVEQPATLSRLFSVHAYCSTFAAVSSMIRKITQA*
Ga0049085_1020191313300005583Freshwater LenticWSGMNPLGLELIVDTNFAAKTMIITKCGTGFGDAFEFYEQMRSVMSVELPSTLGRNMSFSGYVSTFAAIPSMIRKITQA*
Ga0078117_106478583300005758Lake WaterALGGGNATTWVGSNPLGLEIVVDSNFAAKTMVITNSQKAFEFYEQVRGLMSVEVPSTLGRTFSFYGYVSTFAAVSSMIRKITQA*
Ga0075470_1013197913300006030AqueousLGLELVVDSNFAAKTMIITRVGQGAGDAYEYYEAIRGLMSVEVPAVLGRTMSFHLYASTFAAISGMIRKITQA*
Ga0070744_1012558313300006484EstuarineSWNGNPLGLQLVVDSNFAAKTMVITRVGQGAGDAYEFYESIRGLMSVEQPSVLGRQMSYHGFVSTFAAIPGMIRKITQA*
Ga0070744_1023685613300006484EstuarineVVDSNFAAKTMVITRVGQGTGDAFEFYESIRGLLSVDQPAVLGRLLSFHGYVSTFAAVSGMIRKITQA*
Ga0075471_1062030023300006641AqueousQLVVDSNFAAKTMIITRVGQGSGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAIGGMIRKITQA*
Ga0070749_1033439923300006802AqueousLGLQLVVDSNFAAKTMVITRVGTGVGDAFEFYEQQRGVMSIEKPDVLGRTMSYHGYVSTFAAIGGMIRKITQA*
Ga0075467_1032312423300006803AqueousVFPYVGAPGLQGMNALGGGNASTWVGSNPLGLEIVVDSNFAAKTMIITNSQKAFEFYEQVRGLMSVEVPSTLGRTFSFYGYVSTFAAVSSMIRKITQA*
Ga0075464_1092710813300006805AqueousVGAPGLAGQNALGGGNATTWVGSNPLGLEIVVDSNFAAKTMIITNASKAFEYYESGTTLMSVEQPATLSRLFSAHAFVSTFAAVSSMIRKITQA*
Ga0075472_1051223523300006917AqueousDSNFAAKTMIITRVGQGQGDAFEYYESIRGLQSLEAPAVLGRTFSFHLYASTFAAIGGMIRKITQA*
Ga0070748_117273613300006920AqueousDSNFAAKTMIITRVGQGQGDAYEAYESIRGLMSIENPSVLGRNMSFHGYVSTFAAIPGMIRKITQA*
Ga0070748_128629923300006920AqueousGSQNAVSWNGNPLGLELVVDSNFAAKTMVITRVGQGAGDAYEFYEQQRGLMSVEVPSTLGRTMSFHGYVSTFAAIPGMIRKITQA*
Ga0102976_100464813300007169Freshwater LakeALGGGNASTWVGSNPLGLEIVVDSNFAAKTMVITNSQKAFEFYEQIRGLMSVEVPSTLGRTFSFYGYVSTFAAVSSMIRKITQA*
Ga0075460_1014040623300007234AqueousGNPLGLELVVDSNFAAKTMIITRVGQGAGDAYEFYEQQRGLMSVEVPATLGRTFSFHGYVSTFAAISGMIRKITQA*
Ga0075460_1029143923300007234AqueousVVDSNFAAKTMIITRVGQGSGDAFEFYESIRGLMSIEEPRTLGRTMSFHGYVSTFAAISGMIRKITQA*
Ga0070747_114866713300007276AqueousASTWVGSNPLGLEIVVDSNFAAKTMVITNSQKAFEFYEQVRGLMSVEVPSTLGRTFSFYGYVSTFAAVSSMIRKITQA*
Ga0070745_110414833300007344AqueousVVDSNFAAKTMIITRVGQGTGDAYEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAISGMIRKITQA*
Ga0075458_1010744523300007363AqueousVVDSNFAAKTMIITRLNTGNGDAFEYYEQVRGLMSVEVPSTLGRQFSYHMYASTFAAIPGMIRKITQA*
Ga0105054_1051840413300007520FreshwaterDGNFAEKTMIITKVGTGFGDAFEYYEQQKGLMSVQVPSTLGRTMSYHMYASTFAAIPGMIRKITQT*
Ga0099851_131142513300007538AqueousSWNGTPLGLQLVVDSNFANKTMIITRVGQGQGDAYEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAIPGMIRKITQA*
Ga0102919_124197323300007597EstuarineLQLVVDSNFAAKTMIITRAGQGSGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAIAGMIRKITQA*
Ga0102923_119167513300007606EstuarineGLQLVVDSNFAAKTMVVTRVGQGQGDAFEAYESIRGLMSVEVPSVLGRNMSFHGYVSTFAAISGMIRKITQA*
Ga0104986_112013300007734FreshwaterWVGSNPLGLEIVVDSNFAAKTMIITNSQKAFEFYEQIGGLMSREEPSTLGRVFSFHGFVSTFAAVPGMIRKITQA*
Ga0108970_1053869113300008055EstuaryWNGNPLGLQLIVDSNFAAKTMVITRVGQGTGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAIGGMIRKITQA*
Ga0114341_1018564813300008108Freshwater, PlanktonLGGGNATTWTGSNPLGLEIVVDSNFAAKTMIITNSQKAFEFYEQIRGLMSVEVPSTLGRTFSFYGYVSTFAAVAGMIRKITQA*
Ga0114363_108269833300008266Freshwater, PlanktonLGGGNATTWTGSNPLGLEIVVDSNFAAKTMIITNSQKAFEFYESVRGLTSVEVPSTLGRTFSFHGYVSTFAAVSGMIRKITQA*
Ga0114363_122057823300008266Freshwater, PlanktonLGLQLVVDSNFAAKTMIITRVGQGSGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAIGGMIRKITQA*
Ga0114880_111459913300008450Freshwater LakeVVDSNFAAKTMVITRVGQGAGDAFEFYEQQRGLMSVEAPSVLGRTFSFHGYVSTFAAIPGMIRKITQA*
Ga0105105_1050288123300009009Freshwater SedimentGGNATSWNGTPLGLQLVVDSNFAAKTMIITRVGQGQGDAFEAYESIRGLMSVEQPAVLGRNMSFHGYVSTFAAIPGMIRKVTQA*
Ga0114977_1065061613300009158Freshwater LakeLGLQLVVDSNFAAKTMIITRVGQGQGDAYEFYESISGLQSFENPATLGRNMSFYGYVSTFAAISGMIRKITQA*
Ga0129333_1090696733300010354Freshwater To Marine Saline GradientAATWNGNPLGLELVVDSNFAAKTMIITRVGQGAGDAYEFYEQQRGLMSVEVPATLGRTFSFHGYVSTFAAISGMIRKITQA*
Ga0129336_1026292023300010370Freshwater To Marine Saline GradientATWNGNPLGLELVVDSNFAAKTMVITRVGQGAGDAYEFYEQQRGLMSVEVPSTLGRTFSFHGYVSTFAAISGMIRKITQA*
Ga0133913_1040055673300010885Freshwater LakeSWNGNPLGLQLVVDSNFAAKTMIITRVGQGQGDAYEFYESIQGLLSVDTPATLGKTMSFHGYVSTFAAISGMIRKITQA*
Ga0129318_1011268823300011009Freshwater To Marine Saline GradientSNPLGLELVVDSNFAAKTMIITNASKAFEYYESGTTLMSVEQPATLSRLFSAHAYVSTFAAVSSMIRKITQA*
Ga0136713_103184113300011183FreshwaterSSWNGNPLGLQLVVDSNFANKTMIITRVGQGQGDAYEFYESIRGLMSLENPSTLGRNMSFHGYVSTFAAIGGMIRKITQA*
Ga0136709_104850313300011184FreshwaterSSAGSWNGTPMGLQLVVDSNFAAKTMIITRVGQGQGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAIGGMIRKITQA*
Ga0153805_108533023300012013Surface IceSQNAVSWNGNPLGLELVVDSNFAAKTMVITRVGQGAGDAYEFYEQQRGLMSVEVPSTLGRTMSFHGYVSTFAAIPGMIRKITQA*
Ga0157615_105725913300012734FreshwaterGQASSWNGNPLGLQLVVDSNFAAKTMIITRVGQGAGDAYEFYESIRGLMSVEQPAVLGRNMSFHGYVSTFAAIGGMIRKITQA*
Ga0164293_1070378813300013004FreshwaterLVVDSNFAAKTMIITRVGQGQGDAFEFYESIRGLMSVEQPSVLGRQFSFHGYVSTFAAIGGMIRKITQA*
Ga0164293_1095883813300013004FreshwaterMGLQLVVDSNFAAKTMIITRVGQGSGDAFEFYESIRGLQSLEAPAVLGRTMSFHGYVSTFAAIGGMIRKITQA*
Ga0164292_1086061413300013005FreshwaterLGGGQASSWNGNPLGLQLVVDSNFAAKTMIITRVGQGAGDAYEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAIGGMIRKITQA*
(restricted) Ga0172367_1003899713300013126FreshwaterNPLGLQLVVDSNFAAKTMIITRVGAGSGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAIGGMIRKITQV*
(restricted) Ga0172373_1038357213300013131FreshwaterGSNPLGLEIVVDSNFAAKTMIITNSQKAFEFYEQVRGLMSVEVPSTLGRTFSFYGYVSTFAAVSSMIRKITQA*
(restricted) Ga0172372_1036099313300013132FreshwaterNALGGGNATTWVGSNPLGLEIVVDSNFAAKTMVITNSQKAFEFYEQVRGLMSVEVPSTLGRTFSFYGYVSTFDAVSSMIRKITQA*
(restricted) Ga0172371_1073728313300013138FreshwaterNATTWVGSNPLGLEIVVDSNFAAKTMVITNSQKAFEFYEQVRGLMSVEVPSTLGRTFSFYGYVSTFDAVSSMIRKITQA*
Ga0177922_1058100613300013372FreshwaterTSWNGTPLGLQLVVDSNFAGKTMIITRVGQGSGDAYEYYESIRGLMSVELPSTLGRNMSFHGYCSTFAAIPGMIRKITQA*
Ga0182046_124722713300016776Salt MarshGNPLGLELVVDSNFAAKTMVITRVGQGTGDAYEFYEQIRGLMSVEVPATLGRTMSFHGYVSTFAAISGMIRKITQA
Ga0181364_102134033300017701Freshwater LakeSWNGTPLGLQLVVDSNFAGKTMIITRVGQGSGDAYEYYESIRGLMSVELPSTLGRNMSFHGYCSTFAAIPGMIRKITQA
Ga0181365_101297613300017736Freshwater LakeLGGGSATSWNGTPLGLQLVVDSNFAGKTMIITRVGQGSGDAYEYYESIRGLMSVELPSTLGRNMSFHGYCSTFAAISGMIRKITQA
Ga0181365_115480523300017736Freshwater LakeGLQLVVDSNFAGKTMIITRVGQGAGDAYEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAIPGMIRKITQA
Ga0181356_121297613300017761Freshwater LakeLVVDSNFAGKTMIITRVGQGSGDAYEYYESIRGLMSVELPSTLGRNMSFHGYCSTFAAISGMIRKITQA
Ga0181343_108942323300017766Freshwater LakePLGLQLVVDSNFAAKTMIITRVGQGAGDAYEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAISGMIRKITQA
Ga0181357_107939013300017777Freshwater LakeLGLQLVVDSNFAGKTMIITRVGQGSGDAYEYYESIRGLMSVELPSTLGRNMSFHGYCSTFAAISGMIRKITQA
Ga0181346_103032213300017780Freshwater LakeVVDSNFAAKTMIITRVGQGQGDAYEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAIGGMIRKITQA
Ga0181346_115740523300017780Freshwater LakeSWNGTPLGLQLVVDSNFADKTMVITRVGQGQGDAYEFYESIQGLLSVDTPATLGKTMSFHGYVSTFAAISGMIRKITQA
Ga0181346_127959523300017780Freshwater LakeGLQLVVDSNFAGKTMIITRVGQGQGDAFEFYEQIRGLMSVEVPSTLGRTMSFYGYVSTFAAISGMIRKITQA
Ga0181355_117182423300017785Freshwater LakeVVDSNFAAATMVITKVGTGFGDAFEFYEQQKGILSVEAPSTLGRTFSYHGYVSTFAAVGGMIRKITQ
Ga0181355_125163013300017785Freshwater LakeTPLGLQLVVDSNFAGKTMIITRVGQGSGDAYEYYESIRGLMSVELPSTLGRNMSFHGYCSTFAAIPGMIRKITQA
Ga0181359_113104623300019784Freshwater LakeWNGTPLGLQLVVDSNFAGKTMIITRVGQGSGDAYEYYESIRGLMSVELPSTLGRNMSFHGYCSTFAAIPGMIRKITQA
Ga0194049_115259013300020157Anoxic Zone FreshwaterPWVGSNPLGLEIVVDSNFAAKTMVITNSQKAFEYYEDIRGIMSVEQPATLSRLFSVHAYVSTFAAVGSMIRKITQA
Ga0211729_1101989813300020172FreshwaterLGGGSATSWNGTPLGLQLVVDSNFAAKTMIITRVGQGQGDAYEFYEQIRGLMSVEVPSTLGRTMSFYGYVSTFAAISGMIRKITQA
Ga0208091_100491413300020506FreshwaterVVDSNFAAKTMIITRVGQGQGDAYEFYESIQGLLSVDTPSTLGKTMSFHGYVSTFAAIGGMIRKITQA
Ga0213922_107031923300021956FreshwaterQLVVDSNFAAKTMIITRVGQGQGDAFEFYESIRGLQSLENPSVLGRNMSFHGYVSTFAAIGGMIRKITQA
Ga0222713_1054421013300021962Estuarine WaterQLVVDSNFAAKTMIITRVGQGQGDAYEFYESIRGLMSLENPSTLGRNMSFHGYVSTFAAISGMIRKITQA
Ga0181354_105704033300022190Freshwater LakePLGLELVVDSNFANKTMIVTRVGQGQGDAYEFYEQIRGLMSVEVPSTLGRTMSFYGYVSTFAAISGMIRKITQA
Ga0181354_114569723300022190Freshwater LakeQGNPLGLQLVVDSNFAAKTMIITRVGQGTGDAYEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAISGMIRKITQA
Ga0255168_102555733300024506FreshwaterVGAPGLQGMNALGGGNASTWVGSNPLGLEIVVDSNFAAKTMVITNSQKAFEFYEQVRGLMSVEVPSTLGRTFSFYGYVSTFAAVSSMIRKITQA
Ga0255229_104678323300024848FreshwaterLGLQLVVDSNFAAKTMIITRVGTGQGDAYEFYEQIKGLMSVEIPSTLGRTFSYHGYVSTFAAIGGMIRKITQA
Ga0208147_106564513300025635AqueousATSWNGNPLGLELVVDSNFAAKTMIITRLNTGNGDAFEYYEQVRGLMSVEVPSTLGRQFSYHMYASTFAAIPGMIRKITQA
Ga0208005_113175313300025848AqueousGSQNAATWNGNPLGLELVVDSNFANKTMVITRVGQGAGDAYEFYEAQRGLMSVELPSVLGRTMSFHGYVSTFAAISGMIRKITQA
Ga0208783_1009019743300025872AqueousLGLELVVDSNFAAKTMVITRVGQGAGDAYEFYEQQRGLMSVEVPSTLGRTMSFHGYVSTFAAIPGMIRKITQA
Ga0208916_1004316213300025896AqueousTSWNGNPLGLQLVVDSNFAAKTMIITRVGQGQGDAYEFYESIRGLMSVDQPSVLGRQFSFHGYVSTFAAIGGMIRKITQA
Ga0208916_1016099913300025896AqueousSQAASSWNGNPLGLQLVVDSNFAAKTMIITRVGQGQGDAFEYYESIRGLMSIENPSLLGRTMSFHGYVSTFAAIGGMIRKITQA
Ga0208916_1029336113300025896AqueousTPMGLQLVVDSNFAAKTMIITRVGQGQGDAFEFYESIRGLMSVEVPSTLGRTMSFHGYVSTFAAIGGMIRKITQA
Ga0255074_101248233300027121FreshwaterSWNGNPLGLQLVVDSNFAAKTMIITRVGQGSGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAISGMIRKITQA
Ga0255067_101689113300027129FreshwaterLQLVVDSNFAAKTMIITRVGQGSGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAISGMIRKITQA
Ga0255070_100597263300027133FreshwaterATSWNGNPLGLQLVVDSNFAAKTMIITRVGTGQGDAYEFYEQIKGLMSVEIPSTLGRTFSYHGYVSTFAAIGGMIRKITQA
Ga0255081_104922623300027155FreshwaterPLGLQLVVDSNFAAKTMIITRVGQGQGDAYEFYESIRGLMSLENPSTLGRNMSFHGYVSTFAAISGMIRKITQA
Ga0255086_104466813300027486FreshwaterLGLQLVVDSNFAAKTMIITRVGQGAGDAFEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAIGGMIRKITQA
Ga0255093_104171623300027492FreshwaterTSWNGNPLGLQLVVDSNFAAKTMIITRVGQGSGDAFEFYESIRGLQSLENPSVLGRTMSFHGYVSTFAAIGGMIRKITQA
Ga0255077_100015213300027529FreshwaterLGASSAGSWNGTPMGLQLVVDSNFAAKTMIITRVGQGSGDAFEYYESIRGLQSLENPSVLGRTMSFHLYASTFAAIPGMIRKITQA
Ga0208974_106230633300027608Freshwater LenticATTWVGSNPLGLEIVVDSNFAAKTMIVTNASKAFEYYESVRGILSVEQPATLSRLFSVHAYCSTFAAVSSMIRKITQA
Ga0209553_103616313300027688Freshwater LakeLNAGTWNGNPLGLELVVDSNFANKTMIVTRVGQGQGDAYEFYEQIRGLMSVEVPSTLGRTMSFYGYVSTFAAISGMIRKITQA
Ga0209491_1022995543300027832FreshwaterTLGAGDARSWSGMNPLGLEIVVDGSFAAKTMVITKVGTGFGDAFEYYEQHKSLMSVQVPSTLGRTMSYHMYASTFAAIPGMIRKITQA
Ga0209253_1093424313300027900Freshwater Lake SedimentGGQASSWNGNPLGLQLVVDSNFAAKTMIITRVGQGAGDAYEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAIGGMIRKITQA
Ga0209400_131503623300027963Freshwater LakeGNPLGLQLVVDSNFAAKTMIITRVGQGQGDAYEYYEAPQSLMSFENPSVLGRTMSFHGYCSTFAAVPGMIRKITQA
Ga0209702_1014094233300027976FreshwaterIVVDGNFAAKTMVITKVGTGFGDAFEYYEQQKGLMSVQVPSTLGRTMSYHMYASTFAAIPGMIRKITQA
Ga0209284_1059064413300027983FreshwaterSGMNPLGLEIVVDGNFAAKTMVITKVGTGFGDAFEYYEQQKGLMSVQVPSTLGRTMSYHMYASTFAAIPGMIRKITQA
Ga0255226_104082213300028255FreshwaterWNGNPLGLQLVVDSNFAAKTMIITRVGTGQGDAYEFYEQIKGLMSVEIPSTLGRTFSYHGYVSTFAAIGGMIRKITQA
Ga0304730_101883913300028394Freshwater LakeMGGGNATTWVGSNPLGLEIVVDSNFAAKTMVITNASKAFEYYESVRGILSVEQPATLSRLFSVHAYCSTFAAVGSMIRKITQA
Ga0315293_1027695143300031746SedimentLGLQLVVDSNFASKTMVITRVGQGSGDAYEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAIPGMIRKITQA
Ga0315909_1089939713300031857FreshwaterATSWNGNPLGLQLVVDSNFAAKTMIITRVGQGQGDAYEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAIPGMIRKITQA
Ga0315904_1066976013300031951FreshwaterVVDSNFAAKTMIITRVGQGSGDAFEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAIGGMIRKITQA
Ga0315904_1071368323300031951FreshwaterGLQLVVDSNFAAKTMIITRVGQGQGDAFEYYESIRGLMSVEVPALLGRTMSYHLYASTFAAIPGMIRKITQA
Ga0315901_1030653613300031963FreshwaterPLGLEIVVDSNFAAKTMIITNSQKAFEFYEQIRGLMSVEVPSTLGRTFSFYGYVSTFAAVAGMIRKITQA
Ga0315274_1172726123300031999SedimentGVGSASSWVGNPLGLQLVVDSNFASKTMVITRVGQGSGDAYEFYESIRGLMSVEVPATLGRTMSFHGYVSTFAAIPGMIRKITQA
Ga0315902_1013348473300032093FreshwaterVVDSNFAAKTMIITRVGTGQGDAYEFYEQIKGLMSVEIPSTLGRTFSYHGYVSTFAAIGGMIRKIVQA
Ga0315902_1031806543300032093FreshwaterLGLEIVVDSNFAAKTMIITNSQKAFEFYEQIRGLMSVEVPSTLGRTFSFYGYVSTFAAVSGMIRKITQA
Ga0335396_1049459523300032462FreshwaterIVVDGNFAAKTMVITKVGTGFGDAFEYYEQQKGLMSVQIPSTLGRTMSYHMYASTFAAIPGMIRKITQA
Ga0334979_0172690_1036_12513300033996FreshwaterLQLVVDSNFAAKTMIITRVGQGQGDAYEFYESIQGLLSVDTPATLGKTMSFHGYVSTFAAIGGMIRKITQA
Ga0334986_0359662_505_7503300034012FreshwaterASSWNGNPLGLQLVVDSNFAAKTMIITRVGQGAGDAFEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAIGGMIRKITQA
Ga0335010_0092770_1816_20313300034092FreshwaterLQLVVDSNFAAKTMIITRVGQGAGDAYEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAIGGMIRKITQA
Ga0335030_0571836_447_6983300034103FreshwaterQSATSWNGNPLGLQLVVDSNFAAKTMIITRVGQGQGDAYEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAISGMIRKITQA
Ga0335031_0293635_1_2343300034104FreshwaterTTWVGSNPLGLEIVVDSNFAAKTMIVTNASKAFEYYESVRGILSVEQPATLSRLFSVHAYCSTFAAVSSMIRKITQA
Ga0335056_0682084_3_2663300034120FreshwaterALGGGQASSWNGNPLGLQLVVDSNFAAKTMIITRVGQGAGDAYEFYESIRGLMSVEQPSVLGRNMSFHGYVSTFAAIGGMIRKITQA
Ga0335048_0011658_2_2623300034356FreshwaterQNALGGGNATTWTGSNPLGLEIVVDSNFAAKTMIITNASKAFEYYESGTTLMSVEQPATLSRLFSAHSYVSTFAAVPGMIRKITQA
Ga0348337_173503_12_2723300034418AqueousMNALGGGNASTWVGSNPLGLEIVVDSNFAAKTMVITNSQKAFEFYEQVRGLMSVEVPSTLGRTFSFYGYVSTFAAVSSMIRKITQA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.