Metagenome / Metatranscriptome Family F078691

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078691
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	81 residues
Representative Sequence	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREARERRKAEEQEDGR
Number of Associated Samples	89
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	25.86 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.793 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.517 % of family members)
Environment Ontology (ENVO)	Unclassified (31.034 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.690 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.25% β-sheet: 0.00% Coil/Unstructured: 43.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00588	SpoU_methylase	2.59
PF00171	Aldedh	2.59
PF00072	Response_reg	2.59
PF13545	HTH_Crp_2	1.72
PF03704	BTAD	1.72
PF01391	Collagen	0.86
PF13539	Peptidase_M15_4	0.86
PF07883	Cupin_2	0.86
PF00437	T2SSE	0.86
PF01022	HTH_5	0.86
PF00542	Ribosomal_L12	0.86
PF13229	Beta_helix	0.86
PF00872	Transposase_mut	0.86
PF01694	Rhomboid	0.86
PF00211	Guanylate_cyc	0.86
PF00027	cNMP_binding	0.86
PF00903	Glyoxalase	0.86
PF00155	Aminotran_1_2	0.86
PF00196	GerE	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	2.59
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	2.59
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	2.59
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	2.59
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	2.59
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	2.59
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	1.72
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	1.72
COG0222	Ribosomal protein L7/L12	Translation, ribosomal structure and biogenesis [J]	0.86
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.86
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
All Organisms	root	All Organisms	36.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
cellular organisms	root	All Organisms → cellular organisms	35.34 %
Viruses	superkingdom	All Organisms → Viruses	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.14 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.86 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.69 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	11.21 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.86 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.21 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.86 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.21 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.86 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.21 %
unclassified Cellulomonas	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas	0.86 %
Ktedonobacter robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.21 %
Cellulomonas sp. KRMCY2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. KRMCY2	0.86 %
Ktedonobacter robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae	0.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig512056	All Organisms → cellular organisms → Bacteria → Terrabacteria group	804	Open in IMG/M
2228664021\|ICCgaii200_c0680515	Not Available	502	Open in IMG/M
3300000890\|JGI11643J12802_10422630	Not Available	930	Open in IMG/M
3300000890\|JGI11643J12802_12158694	Not Available	731	Open in IMG/M
3300000956\|JGI10216J12902_102081662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1701	Open in IMG/M
3300000956\|JGI10216J12902_105752629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3142	Open in IMG/M
3300000956\|JGI10216J12902_109225114	Not Available	679	Open in IMG/M
3300000956\|JGI10216J12902_109295101	All Organisms → cellular organisms → Bacteria	12349	Open in IMG/M
3300004156\|Ga0062589_101228514	Not Available	719	Open in IMG/M
3300004157\|Ga0062590_101774295	Not Available	631	Open in IMG/M
3300005093\|Ga0062594_100032783	Not Available	2414	Open in IMG/M
3300005093\|Ga0062594_100124417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1616	Open in IMG/M
3300005093\|Ga0062594_101260866	Not Available	738	Open in IMG/M
3300005161\|Ga0066807_1023825	Not Available	637	Open in IMG/M
3300005168\|Ga0066809_10007589	Not Available	1961	Open in IMG/M
3300005169\|Ga0066810_10184197	Not Available	517	Open in IMG/M
3300005294\|Ga0065705_10197807	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300005295\|Ga0065707_11029047	Not Available	532	Open in IMG/M
3300005332\|Ga0066388_108324336	Not Available	517	Open in IMG/M
3300005343\|Ga0070687_101245476	Not Available	550	Open in IMG/M
3300005345\|Ga0070692_10087270	Not Available	1690	Open in IMG/M
3300005354\|Ga0070675_101082498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300005467\|Ga0070706_101201013	Not Available	697	Open in IMG/M
3300005471\|Ga0070698_100223596	Not Available	1816	Open in IMG/M
3300005618\|Ga0068864_100894200	Not Available	877	Open in IMG/M
3300005843\|Ga0068860_100271850	Not Available	1654	Open in IMG/M
3300005937\|Ga0081455_10477110	Not Available	844	Open in IMG/M
3300005937\|Ga0081455_10609578	Not Available	710	Open in IMG/M
3300006049\|Ga0075417_10145375	Not Available	1101	Open in IMG/M
3300006572\|Ga0074051_10010378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4352	Open in IMG/M
3300006572\|Ga0074051_10010661	Not Available	671	Open in IMG/M
3300006576\|Ga0074047_10032761	Not Available	604	Open in IMG/M
3300006580\|Ga0074049_10035022	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1164	Open in IMG/M
3300006844\|Ga0075428_100667172	Not Available	1108	Open in IMG/M
3300006844\|Ga0075428_100845516	Not Available	972	Open in IMG/M
3300006844\|Ga0075428_102608822	Not Available	516	Open in IMG/M
3300006845\|Ga0075421_102596565	Not Available	526	Open in IMG/M
3300006846\|Ga0075430_101083121	Not Available	660	Open in IMG/M
3300006853\|Ga0075420_100501662	Not Available	1048	Open in IMG/M
3300009094\|Ga0111539_10314651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1822	Open in IMG/M
3300009100\|Ga0075418_10787098	Not Available	1027	Open in IMG/M
3300009100\|Ga0075418_10827765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300009100\|Ga0075418_12512232	Not Available	562	Open in IMG/M
3300009147\|Ga0114129_10220405	Not Available	2559	Open in IMG/M
3300009147\|Ga0114129_10435421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1722	Open in IMG/M
3300009147\|Ga0114129_10660431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1348	Open in IMG/M
3300009147\|Ga0114129_12434052	Not Available	627	Open in IMG/M
3300009156\|Ga0111538_12288540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300009157\|Ga0105092_10425961	Not Available	756	Open in IMG/M
3300009817\|Ga0105062_1075022	Not Available	645	Open in IMG/M
3300009837\|Ga0105058_1075356	Not Available	774	Open in IMG/M
3300010029\|Ga0105074_1012735	Not Available	1344	Open in IMG/M
3300010147\|Ga0126319_1156305	Not Available	533	Open in IMG/M
3300010362\|Ga0126377_10002608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12473	Open in IMG/M
3300010362\|Ga0126377_10047549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3724	Open in IMG/M
3300010362\|Ga0126377_10233006	Not Available	1783	Open in IMG/M
3300010362\|Ga0126377_10625339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300010401\|Ga0134121_12112297	Not Available	598	Open in IMG/M
3300011119\|Ga0105246_12277055	Not Available	529	Open in IMG/M
3300012022\|Ga0120191_10000148	All Organisms → cellular organisms → Bacteria	4219	Open in IMG/M
3300012204\|Ga0137374_10915111	Not Available	643	Open in IMG/M
3300012353\|Ga0137367_10060625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2825	Open in IMG/M
3300012939\|Ga0162650_100045811	Not Available	707	Open in IMG/M
3300012948\|Ga0126375_10281243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1144	Open in IMG/M
3300012960\|Ga0164301_11842829	Not Available	510	Open in IMG/M
3300014326\|Ga0157380_11542950	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300014745\|Ga0157377_10078808	Not Available	1921	Open in IMG/M
3300014745\|Ga0157377_10223625	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300014965\|Ga0120193_10010677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300014965\|Ga0120193_10023645	Not Available	720	Open in IMG/M
3300014965\|Ga0120193_10044899	Not Available	619	Open in IMG/M
3300015371\|Ga0132258_10041743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10424	Open in IMG/M
3300015371\|Ga0132258_11369626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1787	Open in IMG/M
3300015371\|Ga0132258_12465093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1302	Open in IMG/M
3300015371\|Ga0132258_13101347	All Organisms → Viruses → Predicted Viral	1149	Open in IMG/M
3300015372\|Ga0132256_101084161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae	915	Open in IMG/M
3300015373\|Ga0132257_103645588	Not Available	560	Open in IMG/M
3300015374\|Ga0132255_101483112	Not Available	1026	Open in IMG/M
3300018072\|Ga0184635_10102511	Not Available	1132	Open in IMG/M
3300018081\|Ga0184625_10305851	Not Available	830	Open in IMG/M
3300018083\|Ga0184628_10407377	Not Available	710	Open in IMG/M
3300018469\|Ga0190270_10037774	All Organisms → cellular organisms → Bacteria	3227	Open in IMG/M
3300018469\|Ga0190270_10970910	Not Available	873	Open in IMG/M
3300018469\|Ga0190270_11110703	Not Available	824	Open in IMG/M
3300018476\|Ga0190274_10216125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1703	Open in IMG/M
3300018481\|Ga0190271_12172621	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300020003\|Ga0193739_1007708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2862	Open in IMG/M
3300021081\|Ga0210379_10129349	Not Available	1065	Open in IMG/M
3300021081\|Ga0210379_10396911	Not Available	609	Open in IMG/M
3300021082\|Ga0210380_10383325	Not Available	643	Open in IMG/M
3300024232\|Ga0247664_1002036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4597	Open in IMG/M
3300025885\|Ga0207653_10397627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	540	Open in IMG/M
3300025926\|Ga0207659_10904411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759	Open in IMG/M
3300025932\|Ga0207690_11102983	Not Available	661	Open in IMG/M
3300025935\|Ga0207709_10081246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2089	Open in IMG/M
3300026095\|Ga0207676_11615094	Not Available	646	Open in IMG/M
3300026116\|Ga0207674_10243519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. KRMCY2	1745	Open in IMG/M
3300027523\|Ga0208890_1058968	Not Available	616	Open in IMG/M
3300027560\|Ga0207981_1002067	Not Available	3582	Open in IMG/M
3300027873\|Ga0209814_10081996	Not Available	1361	Open in IMG/M
3300027909\|Ga0209382_10514666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1316	Open in IMG/M
3300028592\|Ga0247822_10753166	Not Available	791	Open in IMG/M
3300028802\|Ga0307503_10077942	Not Available	1353	Open in IMG/M
3300028809\|Ga0247824_10881222	Not Available	558	Open in IMG/M
3300028878\|Ga0307278_10041319	Not Available	2098	Open in IMG/M
3300031170\|Ga0307498_10264039	Not Available	629	Open in IMG/M
3300031226\|Ga0307497_10269454	Not Available	768	Open in IMG/M
3300031547\|Ga0310887_10490460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300031854\|Ga0310904_11185131	Not Available	550	Open in IMG/M
3300031908\|Ga0310900_10267057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1241	Open in IMG/M
3300032000\|Ga0310903_10044990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1667	Open in IMG/M
3300032075\|Ga0310890_10477768	Not Available	943	Open in IMG/M
3300033407\|Ga0214472_10261341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1657	Open in IMG/M
3300034176\|Ga0364931_0026248	Not Available	1677	Open in IMG/M
3300034417\|Ga0364941_059467	Not Available	870	Open in IMG/M
3300034690\|Ga0364923_0072103	Not Available	841	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.38%
Host-Associated	Host-Associated	33.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.48%
Plants	Host-Associated → Plants	33.62%
Aquatic	Environmental → Aquatic	6.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.34%
Freshwater	Environmental → Aquatic → Freshwater	4.31%
Sediment	Environmental → Aquatic → Sediment	2.59%
Floodplain	Environmental → Terrestrial → Floodplain	2.59%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.83%
Loam	Environmental → Terrestrial → Soil → Loam	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.59%
Sand	Environmental → Terrestrial → Soil → Sand	2.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.31%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.59%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.86%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_06078190	2124908045	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMRREGREAGEQEKGR
ICCgaii200_06805151	2228664021	Soil	MAEQEERLSERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREARERRKVEEQKDAG
JGI11643J12802_104226303	3300000890	Soil	QLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLASGDQIVEEMQREARERRKAEDQQED*
JGI11643J12802_121586942	3300000890	Soil	MAEQEERLSERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEE
JGI10216J12902_1020816622	3300000956	Soil	MVQLSARDLRALQAIADDMERPLAWVARRGIRLYISQILGAEETLARGDRIVEELGREARERRKTGEQDDGQ*
JGI10216J12902_1057526292	3300000956	Soil	MGGKEERLTERLMVQLSSRDLRALQAIADDMERPLAWVARRGIRLYISQILEAESTLAGGDQIVEKMRRDTRERRGAEEQEDGR*
JGI10216J12902_1092251142	3300000956	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQILEAEATLAGGDHIVEEMQREARERRKAEEQEDGR*
JGI10216J12902_10929510110	3300000956	Soil	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILGAEATLAAGNHIVEEMQREARERREPGEQEDGR*
Ga0062589_1012285142	3300004156	Soil	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYVSQILEAEATLAQGDHIVEGMRREARERREAEEQEGR*
Ga0062590_1017742951	3300004157	Soil	SHMADQEERLTERLMVQLSPRDLRALQAIADDMERPLSWVARRGIRLYISQILEAEETLARGDHIVEGMQSEARERRKAGGNRTDGGPLKP*
Ga0062594_1000327834	3300005093	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREARARRKAEEQEGGR*
Ga0062594_1001244171	3300005093	Soil	VADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREAR
Ga0062594_1012608662	3300005093	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREVRERRKAEKQEGGG*
Ga0066807_10238251	3300005161	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMGREARERPKAGEQEDGR*
Ga0066809_100075891	3300005168	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMRSEGRKAGEQENRR*
Ga0066810_101841971	3300005169	Soil	TERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQILEAEETLARGDHIVEEMRSEGRKAGEQENRR*
Ga0065705_101978072	3300005294	Switchgrass Rhizosphere	MPDQEERLTERLMVQLSASDLRALSAIAEEMERPLSWVARRGIRLYIAQVLSAEETLLRSDEVIERVREAHQRGEET*
Ga0065707_110290471	3300005295	Switchgrass Rhizosphere	MADQAERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREARERRKVEEQKDAG*
Ga0066388_1083243361	3300005332	Tropical Forest Soil	MAEQEEKLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLARGDDIIDGMRREDRMRGEAEE*
Ga0070687_1012454761	3300005343	Switchgrass Rhizosphere	ERLTERLMVQLSERDLRALQAIAEDMERPLAWVARRGIRLYISQILEAEATLARGDRIIEEMRHEGNERSKSGEEKGEGEPLKP*
Ga0070692_100872702	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREARERRKAEKQEDGP*
Ga0070675_1010824981	3300005354	Miscanthus Rhizosphere	MPDDQEERLTERLMVQLSASDLRALSAIAEEMERPLSWVARRGIRLYIAQVLSAEETLLRSDEVIERVREAHQRGEET*
Ga0070706_1012010131	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREARERRKAEEQEGGR*
Ga0070698_1002235965	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GDLVADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREARERRKAEKQEDGP*
Ga0068864_1008942001	3300005618	Switchgrass Rhizosphere	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREARERRKVEEQKDAG*
Ga0068860_1002718502	3300005843	Switchgrass Rhizosphere	MVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREARERRKAEKQEDGP*
Ga0081455_104771101	3300005937	Tabebuia Heterophylla Rhizosphere	MADQEERLTERVMVQLSPRDLRALQAIADEMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREARE
Ga0081455_106095782	3300005937	Tabebuia Heterophylla Rhizosphere	MAHQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLARGDHIIEEMRREARERREAGDQNDRR*
Ga0075417_101453752	3300006049	Populus Rhizosphere	MAEQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREARERRKAEKQEDGP*
Ga0074051_100103781	3300006572	Soil	MADHEERLTERLMVQLSPRDLRALQAIAEDMERPLAWVARRGIRLYISQILEAEATLARGDDIIEEMHREALGPSEAADTTRNDQ*
Ga0074051_100106611	3300006572	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMGREARERGEAGEQEDGR*
Ga0074047_100327612	3300006576	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMGREARER
Ga0074049_100350221	3300006580	Soil	MADQEERLSERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREARERRKAEKKEDGR*
Ga0075428_1006671723	3300006844	Populus Rhizosphere	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLARGDHIIEEMQREARERRKAAEKEAER*
Ga0075428_1008455163	3300006844	Populus Rhizosphere	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREAR
Ga0075428_1026088221	3300006844	Populus Rhizosphere	MPDDQDERLTERLMVQLSASDLRALSAIAEEMERPLSWVARRGIRLYIAQVLSAEETLLRSDEVIERVREAHQRGEET*
Ga0075421_1025965652	3300006845	Populus Rhizosphere	ERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRPYISQLLDAEATLAGGDHIVEEMQREARERRKAEEQEGER*
Ga0075430_1010831211	3300006846	Populus Rhizosphere	LSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREARERRKAEKQEDGP*
Ga0075420_1005016622	3300006853	Populus Rhizosphere	MADQEERLTERVMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLARGDHIIDEMRREAREGRKAGGEEDGR*
Ga0111539_103146513	3300009094	Populus Rhizosphere	MANEEERLSERLMVQLSPRDLRALQAIADEMERPLAWVARRGIRLYISQILEAEATLARGDDIVEGMRREAHERREAKEQGGEP*
Ga0075418_107870982	3300009100	Populus Rhizosphere	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRPYISQLLDAEATLAGGDHIVEEMQREARERRKAEEQEGER*
Ga0075418_108277651	3300009100	Populus Rhizosphere	VADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREARE
Ga0075418_125122322	3300009100	Populus Rhizosphere	LMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREARERRKAEEQEGGR*
Ga0114129_102204053	3300009147	Populus Rhizosphere	MAEQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQ
Ga0114129_104354212	3300009147	Populus Rhizosphere	VADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQ
Ga0114129_106604313	3300009147	Populus Rhizosphere	MGDQEERLTERLMVQLSPRDLRALQAIADEMERPLAWVARRGIRLYISQILEAEATLARGDDIVEGMRREAHERREAEEQGGER*
Ga0114129_124340522	3300009147	Populus Rhizosphere	LMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLARGDHIIEEMQREARERRKAAEKEAER*
Ga0111538_122885402	3300009156	Populus Rhizosphere	MGDQEERLTERLMVQLSPRDLRALQAIADEMERPLAWVARRGIRLYISQILEAEATLARGDDIVEGMRREAHERRETEEQGGER*
Ga0105092_104259611	3300009157	Freshwater Sediment	MADSEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVQEMRREGREAGEQEIER*
Ga0105062_10750221	3300009817	Groundwater Sand	QEERLTERVMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISKILEAEATLAGGDEIVKEMQREARERRKAGGQDDGR*
Ga0105058_10753562	3300009837	Groundwater Sand	MVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQILDAEATLAGGDHIVEEMQREARERRKAGGQDDGR*
Ga0105074_10127351	3300010029	Groundwater Sand	MAEQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMRREGRKSEE*
Ga0126319_11563052	3300010147	Soil	MADQAERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLASGDHIVEEMQRGARERRKVEEQKDAG*
Ga0126377_1000260812	3300010362	Tropical Forest Soil	MPDEERLSQRIVVQLTERDVRALNAVAAEMDRPVAWVARRGIRFYLAQILEAEDTLARGDNIVERMRQAAAGEPEEQEE*
Ga0126377_100475493	3300010362	Tropical Forest Soil	MTDQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLARGDHIIDEMRREAQERRGAGPQEEGR*
Ga0126377_102330061	3300010362	Tropical Forest Soil	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAQGDRIVEEMQREARERRQAGEGKDGR*
Ga0126377_106253393	3300010362	Tropical Forest Soil	MADQDERLTERVMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQVLEAEATLARGDHIIEEMRREARERREAEEQEGGG*
Ga0134121_121122971	3300010401	Terrestrial Soil	QEERLTERLMVQLSQRDLRALQAIAEDMERPLAWVARRGIRLYISQILEAEATLARGDRIIEEMRHANERSKSGEEKGEGEPLKP*
Ga0105246_122770551	3300011119	Miscanthus Rhizosphere	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREARERRKAEEQEDGR*
Ga0120191_100001484	3300012022	Terrestrial	MPDQQEERLTERLMVQLSERDLRALQAIADSMERPLAWVARRGIRLYISQVLAAEETLARGDEIIDEMRREARARREAGEEDARGSTATTPP*
Ga0137374_109151111	3300012204	Vadose Zone Soil	MAAQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEIGREARERRKAGEQENGR*
Ga0137367_100606252	3300012353	Vadose Zone Soil	MAGQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMGREARERRKSGEQADGR*
Ga0162650_1000458112	3300012939	Soil	MVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISKILEAEATLAGADDIVKEMQREARERRKAGDQDDGR*
Ga0126375_102812431	3300012948	Tropical Forest Soil	MPDEERLSQRIVVQLTERDVRALNAVAAEMDRPVAWVARRGIRFYLAQILEAEDTLARGDNIVER
Ga0164301_118428291	3300012960	Soil	PNLCDGGRVNLMADQEERLTERVMVQLSQRDLRALQAIAEDMERPLAWVARRGIRLYISQILEAEETLARGDHIIEEMHREATERSEPGDEKDGG*
Ga0157380_115429501	3300014326	Switchgrass Rhizosphere	DQEERLTERLMVQLSERDLRALQAIAEDMERPLAWVARRGIRLYISQILEAEATLARGDRIIEEMRHEGNERSKSGEEKGEGEPLKP*
Ga0157377_100788081	3300014745	Miscanthus Rhizosphere	VADQEERLTERLMVQLRPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREARERRKAEKQEDGP*
Ga0157377_102236252	3300014745	Miscanthus Rhizosphere	MADHEERLTERLMVQLSPRDLRALQAIAEDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREARARRKAEEQEGGR*
Ga0120193_100106773	3300014965	Terrestrial	RLTERLMVQLSPRDLRALQAIADDMKRPLAWVARRGIRLYISQILEAEETLARGDHIVEGMRREGGKAGEQEDGQ*
Ga0120193_100236452	3300014965	Terrestrial	MADHAERLTERLMVQLSPRDLRALQAIADDVERPLAWVARRGIRLYISQVLEAEETLARGDHIVEEMGREARERSKAGEQEGGR*
Ga0120193_100448992	3300014965	Terrestrial	MPDQQEERLTERLMVQLSERDLRALQAIADSMERPLAWVARRGIRLYISQVLAAEETLARGDEIIDE
Ga0132258_100417435	3300015371	Arabidopsis Rhizosphere	MRRWYGVLMADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQVLEAEETLARGDHIVEGMQREARERRKADKQEDER*
Ga0132258_113696263	3300015371	Arabidopsis Rhizosphere	TERLMVQLSPRDLRALQAIADDMERPLAWGARRGIRLYISQSLEAEATLARGDHIVEEMQREARERRKAKE*
Ga0132258_124650933	3300015371	Arabidopsis Rhizosphere	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQLLEAEETLARGDQIVEGMRHEARERDEA*
Ga0132258_131013472	3300015371	Arabidopsis Rhizosphere	VADQEERLSERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLARGDRIVEEMQREARDRREADKKEDGE*
Ga0132256_1010841612	3300015372	Arabidopsis Rhizosphere	MRRWYGVLMADHEERLTERLMVQLSPRDLRSLQAIADDMERPLAWVARRGIRLYISQVLEAEETLARGDHIVEGMQREARERRKADKQEDER*
Ga0132257_1036455881	3300015373	Arabidopsis Rhizosphere	MADQEERLTERVMVQLSPGDLRALQAIADDMDRPLAWVARRGIRLYISEILEAEETLARGDQIIESMGHEDR*
Ga0132255_1014831121	3300015374	Arabidopsis Rhizosphere	MADQEERLTERLMVQLSQRDLRALQAIAEDMERPLAWVARRGIRLYISQILEAEETLARGDHIIEEMHREATERSEPGDEKDGG*
Ga0184635_101025111	3300018072	Groundwater Sediment	MVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLASGDHIVEEMQREARERRKAEEKEDGR
Ga0184625_103058512	3300018081	Groundwater Sediment	MTDHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQILEAEATLAGGDHIVEEMQREARGRRKAGEQKDGR
Ga0184628_104073771	3300018083	Groundwater Sediment	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYIAQILEAEATLARGDHIVEEMRREAPERREAGEQEDGR
Ga0190270_100377743	3300018469	Soil	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILDAEATLAGGDHIVEEMRREAQERRKAGEQDSGR
Ga0190270_109709102	3300018469	Soil	MAEQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAQGDHIVEEMRREARERREAEEPEGGR
Ga0190270_111107032	3300018469	Soil	MADQEERLSERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQLLEAEATLAGGDDIVEKMRREARERRKAGEQKD
Ga0190274_102161252	3300018476	Soil	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEGMRREGGKAGEQDG
Ga0190271_121726212	3300018481	Soil	RVTLMADEEERLSERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQILEAEATLARGDNIVEEMREAQAHRKGE
Ga0193739_10077081	3300020003	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREARKGRKAGEPEK
Ga0210379_101293492	3300021081	Groundwater Sediment	MADQEERLTERLMVQLSPRDLRALQAIADEMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMGREARKAEDQDDGR
Ga0210379_103969111	3300021081	Groundwater Sediment	DVQQAVEQEGALMADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLEAEATLAGGDHIVEEMQREARERRKAGGQED
Ga0210380_103833251	3300021082	Groundwater Sediment	MADQEERLTERLMVQLSQRDLRALQAIAEDMERPLAWVARRGIRLYISQILEAEATLARGDDIIEEMHREALGPSEAADTT
Ga0247664_10020368	3300024232	Soil	MVQLSPRDLRALQAIADDMERPMAWVARRGIRQYISQILGAEETLARGDHIVEEMGRKDRKAEQEDGR
Ga0207653_103976272	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MADQAERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREARERRKVEEQKDAG
Ga0207659_109044112	3300025926	Miscanthus Rhizosphere	MPDDQEERLTERLMVQLSASDLRALSAIAEEMERPLSWVARRGIRLYIAQVLSAEETLLRSDEVIERVREAHQRGEET
Ga0207690_111029831	3300025932	Corn Rhizosphere	VADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREARERRKAEKQEDGP
Ga0207709_100812462	3300025935	Miscanthus Rhizosphere	MVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREARERRKAEKQEDGP
Ga0207676_116150941	3300026095	Switchgrass Rhizosphere	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREARERRKVEEQKDAG
Ga0207674_102435192	3300026116	Corn Rhizosphere	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLAGGDHIVEEMQREVRERRKAEKQEGGG
Ga0208890_10589681	3300027523	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQILEAEETLARGDHIVEEMRSEGRKAGEQENRR
Ga0207981_10020672	3300027560	Soil	MADHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMGREARERGEAGEQEDGR
Ga0209814_100819962	3300027873	Populus Rhizosphere	MAEQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYLSQLLDAEATLAGGDHIVEEMQREARERRKAEKQEDGP
Ga0209382_105146662	3300027909	Populus Rhizosphere	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLARGDHIIEEMQREARERRKAAEKEAER
Ga0247822_107531662	3300028592	Soil	MTDQEERLSERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQLLEAEATLAGGDDIVEKMRREARERRKSGEQED
Ga0307503_100779422	3300028802	Soil	MADQEERLTERLMVQLSPRDLRALQAIAEDMERPLAWVARRGIRLYISQVLEAEETLARGDHIVEEMRDGTRER
Ga0247824_108812221	3300028809	Soil	MAEQEERLTERLMVQLSPRDLRALQVIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMRREAQERRKAGDEKDGR
Ga0307278_100413193	3300028878	Soil	MTDHEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEATLASGDHIVEEMQREARERRKAEEKEDGR
Ga0307498_102640391	3300031170	Soil	MADQEERLTERLMVQLSPRDLRALQAIADDMERPLSWVARRGIRLYISQILEAEETLARGDHIVEGMRSEARERRKAGEQEKKR
Ga0307497_102694542	3300031226	Soil	MADQEDRLTERLMVQLSQRDLRALQAIAEDMERPLAWVARRGIRLYISQILEAEATLARGDHIIEEMRHEAIERSEPGKKTEGDPLKP
Ga0310887_104904603	3300031547	Soil	EERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREARERRKATE
Ga0310904_111851311	3300031854	Soil	MAEQAERLTERLMVQVSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREARERRKVEEQKDAG
Ga0310900_102670573	3300031908	Soil	MADQAERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREARERRKATE
Ga0310903_100449902	3300032000	Soil	MAEQAERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREARKRRKVEEQKDAG
Ga0310890_104777681	3300032075	Soil	MAEQAERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREARERRKVEEQKDAG
Ga0214472_102613411	3300033407	Soil	MAEEERLTERLMVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEGMRREGGKAGEQDG
Ga0364931_0026248_440_694	3300034176	Sediment	MAGQEERLTERLMVQLSPRDLRALQAIADDLERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREAREGRKAKEQEDGR
Ga0364941_059467_508_762	3300034417	Sediment	MADQEERLTERLMVQLSPRDLRALQAIADDLERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREAREGRKAKEQEDGR
Ga0364923_0072103_13_231	3300034690	Sediment	MVQLSPRDLRALQAIADDMERPLAWVARRGIRLYISQILEAEETLARGDHIVEEMQREAREGRKAKEQEDGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078691

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences