Metagenome / Metatranscriptome Family F078688

Basic Information
Family ID	F078688
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	42 residues
Representative Sequence	MSKRFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLATFG
Number of Associated Samples	102
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.52 %
% of genes near scaffold ends (potentially truncated)	99.14 %
% of genes from short scaffolds (< 2000 bps)	92.24 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (68.966 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.552 % of family members)
Environment Ontology (ENVO)	Unclassified (15.517 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.897 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 17.14% Coil/Unstructured: 68.57%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00313	CSD	11.21
PF13474	SnoaL_3	5.17
PF03176	MMPL	2.59
PF01243	Putative_PNPOx	2.59
PF00196	GerE	1.72
PF02771	Acyl-CoA_dh_N	1.72
PF07731	Cu-oxidase_2	1.72
PF13546	DDE_5	1.72
PF02898	NO_synthase	1.72
PF08240	ADH_N	1.72
PF01381	HTH_3	0.86
PF12681	Glyoxalase_2	0.86
PF01610	DDE_Tnp_ISL3	0.86
PF06737	Transglycosylas	0.86
PF02861	Clp_N	0.86
PF00441	Acyl-CoA_dh_1	0.86
PF07690	MFS_1	0.86
PF10009	DUF2252	0.86
PF07366	SnoaL	0.86
PF16925	TetR_C_13	0.86
PF11455	MazE-like	0.86
PF07238	PilZ	0.86
PF01494	FAD_binding_3	0.86
PF13701	DDE_Tnp_1_4	0.86
PF03050	DDE_Tnp_IS66	0.86
PF00903	Glyoxalase	0.86
PF17164	DUF5122	0.86
PF01557	FAA_hydrolase	0.86
PF01642	MM_CoA_mutase	0.86
PF00106	adh_short	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG4362	Nitric oxide synthase, oxygenase domain	Inorganic ion transport and metabolism [P]	3.45
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	2.59
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	2.59
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	2.59
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.72
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.72
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.86
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.86
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.86
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.86
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.86
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.76 %
Unclassified	root	N/A	31.03 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51.72 %
Unclassified	root	N/A	31.03 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.48 %
Unclassified	root	N/A	31.03 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	3.45 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.72 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.72 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.76 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.17 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	3.45 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.72 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.86 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.86 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.86 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.86 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	5.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.17 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	3.45 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.72 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.86 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.86 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.86 %
Dermacoccaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae	0.86 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	5.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.17 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	3.45 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	1.72 %
Actinomycetospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	1.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.86 %
Allobranchiibius	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Allobranchiibius	0.86 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.86 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.86 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	5.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.17 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	3.45 %
Mycolicibacterium smegmatis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium smegmatis	1.72 %
Actinomycetospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	1.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	0.86 %
unclassified Allobranchiibius	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Allobranchiibius → unclassified Allobranchiibius	0.86 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.86 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.86 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	5.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.17 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	3.45 %
Mycolicibacterium smegmatis MC2 155	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium smegmatis → Mycolicibacterium smegmatis MC2 155	1.72 %
Actinomycetospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	1.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Allobranchiibius sp. CTAmp26	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Allobranchiibius → unclassified Allobranchiibius → Allobranchiibius sp. CTAmp26	0.86 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	0.86 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.86 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.86 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_100194285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	639	Open in IMG/M
3300004091\|Ga0062387_101570737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300004139\|Ga0058897_11184302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300005436\|Ga0070713_100490264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1158	Open in IMG/M
3300005438\|Ga0070701_10053441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2102	Open in IMG/M
3300005541\|Ga0070733_10401758	Not Available	912	Open in IMG/M
3300005764\|Ga0066903_105625245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300006059\|Ga0075017_101585055	Not Available	517	Open in IMG/M
3300006572\|Ga0074051_11377458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300006642\|Ga0075521_10169934	Not Available	1027	Open in IMG/M
3300006755\|Ga0079222_10295075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1054	Open in IMG/M
3300006804\|Ga0079221_10316503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M
3300006871\|Ga0075434_100160282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2269	Open in IMG/M
3300009036\|Ga0105244_10065076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1827	Open in IMG/M
3300009090\|Ga0099827_11577507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300009093\|Ga0105240_12610558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	522	Open in IMG/M
3300009174\|Ga0105241_11955967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300009672\|Ga0116215_1288277	All Organisms → cellular organisms → Bacteria → Terrabacteria group	715	Open in IMG/M
3300010343\|Ga0074044_10579424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300010403\|Ga0134123_12859255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300010880\|Ga0126350_11706500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3596	Open in IMG/M
3300011120\|Ga0150983_13236277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	505	Open in IMG/M
3300011271\|Ga0137393_10525675	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300012096\|Ga0137389_10976646	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300012208\|Ga0137376_10585191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	966	Open in IMG/M
3300012356\|Ga0137371_11010160	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012363\|Ga0137390_10743068	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300012501\|Ga0157351_1004816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1058	Open in IMG/M
3300012519\|Ga0157352_1015669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300012957\|Ga0164303_10074732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1595	Open in IMG/M
3300013308\|Ga0157375_13469850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	525	Open in IMG/M
3300014492\|Ga0182013_10312061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	877	Open in IMG/M
3300014658\|Ga0181519_11006732	Not Available	518	Open in IMG/M
3300014969\|Ga0157376_10421102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1296	Open in IMG/M
3300015242\|Ga0137412_10739222	Not Available	728	Open in IMG/M
3300015371\|Ga0132258_12090151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1424	Open in IMG/M
3300017822\|Ga0187802_10445064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300017946\|Ga0187879_10050947	Not Available	2440	Open in IMG/M
3300018040\|Ga0187862_10423824	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	813	Open in IMG/M
3300018047\|Ga0187859_10432688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300020579\|Ga0210407_11118137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300020581\|Ga0210399_11148694	Not Available	619	Open in IMG/M
3300020581\|Ga0210399_11413824	Not Available	543	Open in IMG/M
3300020582\|Ga0210395_10405271	Not Available	1026	Open in IMG/M
3300020583\|Ga0210401_10470313	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300021088\|Ga0210404_10801876	Not Available	538	Open in IMG/M
3300021171\|Ga0210405_10706398	All Organisms → cellular organisms → Bacteria → Terrabacteria group	779	Open in IMG/M
3300021178\|Ga0210408_10280667	Not Available	1328	Open in IMG/M
3300021178\|Ga0210408_11292358	Not Available	554	Open in IMG/M
3300021180\|Ga0210396_10356951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1288	Open in IMG/M
3300021180\|Ga0210396_10647611	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300021181\|Ga0210388_11815086	Not Available	502	Open in IMG/M
3300021402\|Ga0210385_10358458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300021402\|Ga0210385_11535996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300021403\|Ga0210397_10150884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1624	Open in IMG/M
3300021403\|Ga0210397_10312106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	1157	Open in IMG/M
3300021404\|Ga0210389_10430797	Not Available	1037	Open in IMG/M
3300021404\|Ga0210389_10857814	Not Available	708	Open in IMG/M
3300021404\|Ga0210389_11181222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300021420\|Ga0210394_11154307	Not Available	666	Open in IMG/M
3300021432\|Ga0210384_10437926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	1177	Open in IMG/M
3300021433\|Ga0210391_10539102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300021474\|Ga0210390_11095751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300021478\|Ga0210402_10770705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	887	Open in IMG/M
3300021559\|Ga0210409_10890637	All Organisms → cellular organisms → Bacteria → Terrabacteria group	764	Open in IMG/M
3300025412\|Ga0208194_1041211	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300025588\|Ga0208586_1000291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19172	Open in IMG/M
3300025588\|Ga0208586_1124285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300025878\|Ga0209584_10091421	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300025898\|Ga0207692_10332585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	932	Open in IMG/M
3300025898\|Ga0207692_10396895	Not Available	859	Open in IMG/M
3300025939\|Ga0207665_10017509	All Organisms → cellular organisms → Bacteria	4710	Open in IMG/M
3300025939\|Ga0207665_10625584	Not Available	842	Open in IMG/M
3300025939\|Ga0207665_11443702	Not Available	547	Open in IMG/M
3300026214\|Ga0209838_1036680	Not Available	707	Open in IMG/M
3300026551\|Ga0209648_10618545	Not Available	595	Open in IMG/M
3300027058\|Ga0209111_1040791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	592	Open in IMG/M
3300027158\|Ga0208725_1047631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Allobranchiibius → unclassified Allobranchiibius → Allobranchiibius sp. CTAmp26	649	Open in IMG/M
3300027567\|Ga0209115_1148997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300027662\|Ga0208565_1224362	All Organisms → cellular organisms → Bacteria → Terrabacteria group	529	Open in IMG/M
3300027692\|Ga0209530_1170461	Not Available	606	Open in IMG/M
3300027787\|Ga0209074_10272824	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300027853\|Ga0209274_10410830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300028381\|Ga0268264_12642704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	506	Open in IMG/M
3300028565\|Ga0302145_10035130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium smegmatis → Mycolicibacterium smegmatis MC2 155	1800	Open in IMG/M
3300028716\|Ga0307311_10103386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300028780\|Ga0302225_10445488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300028787\|Ga0307323_10128024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	914	Open in IMG/M
3300028800\|Ga0265338_10305142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1156	Open in IMG/M
3300028801\|Ga0302226_10384194	Not Available	588	Open in IMG/M
3300028824\|Ga0307310_10048746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1762	Open in IMG/M
3300029914\|Ga0311359_10694376	Not Available	731	Open in IMG/M
3300029999\|Ga0311339_10883637	All Organisms → cellular organisms → Bacteria → Terrabacteria group	850	Open in IMG/M
3300029999\|Ga0311339_11556139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	586	Open in IMG/M
3300030045\|Ga0302282_1178538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	815	Open in IMG/M
3300030053\|Ga0302177_10616216	All Organisms → cellular organisms → Bacteria → Terrabacteria group	553	Open in IMG/M
3300030057\|Ga0302176_10066009	Not Available	1397	Open in IMG/M
3300030399\|Ga0311353_10081261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3189	Open in IMG/M
3300030520\|Ga0311372_11899128	Not Available	704	Open in IMG/M
3300030617\|Ga0311356_10790916	Not Available	901	Open in IMG/M
3300030706\|Ga0310039_10359286	All Organisms → cellular organisms → Bacteria → Terrabacteria group	542	Open in IMG/M
3300030707\|Ga0310038_10006020	All Organisms → cellular organisms → Bacteria	8423	Open in IMG/M
3300030906\|Ga0302314_11869892	Not Available	521	Open in IMG/M
3300031234\|Ga0302325_12580149	Not Available	603	Open in IMG/M
3300031236\|Ga0302324_100266317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2658	Open in IMG/M
3300031258\|Ga0302318_10492196	Not Available	621	Open in IMG/M
3300031473\|Ga0272434_1243715	Not Available	860	Open in IMG/M
3300031524\|Ga0302320_11991356	Not Available	545	Open in IMG/M
3300031708\|Ga0310686_113801618	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300031708\|Ga0310686_115297644	Not Available	658	Open in IMG/M
3300031708\|Ga0310686_118559525	Not Available	598	Open in IMG/M
3300031715\|Ga0307476_11162374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	566	Open in IMG/M
3300031962\|Ga0307479_10429572	Not Available	1305	Open in IMG/M
3300032898\|Ga0335072_11187775	Not Available	679	Open in IMG/M
3300032954\|Ga0335083_10992745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300033887\|Ga0334790_040749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium smegmatis → Mycolicibacterium smegmatis MC2 155	1814	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.24%
Host-Associated	Host-Associated	7.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.48%
Aquatic	Environmental → Aquatic	7.76%
Plants	Host-Associated → Plants	7.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.10%
Peat	Environmental → Terrestrial → Peat	15.52%
Freshwater	Environmental → Aquatic → Freshwater	6.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Marine	Environmental → Aquatic → Marine	0.86%
Sediment	Environmental → Aquatic → Sediment	0.86%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.52%
Loam	Environmental → Terrestrial → Soil → Loam	12.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.31%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.31%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.86%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.86%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.45%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.45%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.59%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.86%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.86%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.86%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.86%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.86%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.86%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078688

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1001942851	3300001213	Wetland	MAEHFSYDIDSRYLPVVLSFLVRPSKDGVTLTDEGS
Ga0062387_1015707371	3300004091	Bog Forest Soil	MSRRFAYAIDKLYLPLLVPYGLRASKDGVTLTDEGSLSATFGFFKIK
Ga0058897_111843022	3300004139	Forest Soil	MDQHFAYAIDKRYLPVLVPFGLRPAKDGVTLTDGSLLATFGFFRLTTPRTNIT
Ga0070713_1004902643	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRFAYAIDKRYLPVLLPFGLRGSKDGVTLTDEGSLLATFGFIKIKTP
Ga0070701_100534411	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MDQHFAYAIDKRYLPVLVPFGLRPAKDGVTLTDGSFLATFGFFRLTTPRTNIT
Ga0070733_104017581	3300005541	Surface Soil	MTRHFGYAVDRRYLPVLLPFGLRPAKDGVTLTDDGSFVATF
Ga0066903_1056252451	3300005764	Tropical Forest Soil	MDQYFAYAIDRRYLPVLVPFGLRPAKDGVTLTDGSFLATFGF
Ga0075017_1015850552	3300006059	Watersheds	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGSLSATFGFFK
Ga0074051_113774582	3300006572	Soil	MDQHFAYAIDSRYLPVLVPFGLRPAKDGVTLTEGSFLATFGFFRLTTPRTN
Ga0075521_101699341	3300006642	Arctic Peat Soil	MAEHFGYDIDRRYLPVLLPFLVRPSKDGVTLTDEGSFIATFG
Ga0079222_102950752	3300006755	Agricultural Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVSLTDGKYSEVL*
Ga0079221_103165032	3300006804	Agricultural Soil	MSQRFGYAIDKRYLPLLLPFGLRGSKDGVTLTDEGS
Ga0075434_1001602821	3300006871	Populus Rhizosphere	MSRRFGYAIDKRYLPLLLPFGLRGSKDGVTLTGEGSLLATFGFI
Ga0105244_100650761	3300009036	Miscanthus Rhizosphere	MDQYFAYAIDRRYLPVLVPFGLRPAKDGVTLTDGSFLA
Ga0099827_115775071	3300009090	Vadose Zone Soil	MTGIGPIISKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEDSLLATFGFFKIKT
Ga0105240_126105582	3300009093	Corn Rhizosphere	MDQYFVYAIDRRYLPVLVPFGLRPAKDGVTLTDGSFLATFGFFRLTTP
Ga0105241_119559671	3300009174	Corn Rhizosphere	MSRRFGYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLATF
Ga0116215_12882772	3300009672	Peatlands Soil	VTKHFGYAIDKRYLPVLLPCALRPARDGVTLTEEGSLLAT
Ga0074044_105794242	3300010343	Bog Forest Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGSLSATFGFFKI
Ga0134123_128592551	3300010403	Terrestrial Soil	MSRRFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLATFGFIKIKTP
Ga0126350_117065004	3300010880	Boreal Forest Soil	MSRRFAYAIDKRYLPLLVPFGLRSSIDGVTLTDGGSLSATFGFFK
Ga0150983_132362771	3300011120	Forest Soil	MDQHFAYAIDRRYLPVLVPFGLRPAKDGVTLTDGAFVATFGFF
Ga0137393_105256751	3300011271	Vadose Zone Soil	MSKRFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLATFG
Ga0137389_109766461	3300012096	Vadose Zone Soil	MSKRFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEG
Ga0137376_105851912	3300012208	Vadose Zone Soil	MDQHFAYAIDRRYLPVLVPFGLRPAKDGVTLSDGSFLATFGFFRLTTPRANIT
Ga0137371_110101602	3300012356	Vadose Zone Soil	MMSRRFGYAIDKRYLPLLLPFGLRASKDGVTLTDDGSLLATF
Ga0137390_107430681	3300012363	Vadose Zone Soil	MSRRFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSL
Ga0157351_10048163	3300012501	Unplanted Soil	MDQHFDYAIDRRYLPVLVPFGLRSAKDGVTLTDGSF
Ga0157352_10156691	3300012519	Unplanted Soil	VDQHFAYAIDGRYLPVLIPFGFRPAKDGVTLTDGSFLAT
Ga0164303_100747323	3300012957	Soil	MSRHFGYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLA
Ga0157375_134698502	3300013308	Miscanthus Rhizosphere	MDQHFAYAIDRHYLPVLVPFGLRPAKDGVTLTDGSFLATFGFFRLTTPRTNI
Ga0182013_103120612	3300014492	Bog	VTEHFGYAIDKRYLPVLLPFLLRPGRDGVTLTDEGGLIATFGVFKVATP
Ga0181519_110067321	3300014658	Bog	VTRFGYAIDKRYLPVLLPFLLRPTKDGVTITDEGSLVATFGL
Ga0157376_104211021	3300014969	Miscanthus Rhizosphere	MSRRFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLA
Ga0137412_107392221	3300015242	Vadose Zone Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTNEGSLSATFG
Ga0132258_120901511	3300015371	Arabidopsis Rhizosphere	MSRRFGYAIDKRYLPLLLPFGLRVSKDGVTLTDEGSLL
Ga0187802_104450643	3300017822	Freshwater Sediment	MSRRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEG
Ga0187879_100509474	3300017946	Peatland	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGSLSATFGFFKIKT
Ga0187862_104238241	3300018040	Peatland	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVMLTDEGSLSATFGF
Ga0187859_104326882	3300018047	Peatland	MMSRRFAYAIDKRYVPLLLAFGLRGAKDGVTLTDEGSLLATFGFVKIKTPLAN
Ga0210407_111181372	3300020579	Soil	MSKRFVYAIDKRYLPLLVPFGLRGSTDGVTLTDEGSLLA
Ga0210399_111486941	3300020581	Soil	MSERFGYAIDKRYLPLLLLFGLRGSKDGVTITDEGSLLA
Ga0210399_114138242	3300020581	Soil	MSRRFVYAIDKRYLPLLLPLGLRGSKDGVTLTDEGSL
Ga0210395_104052711	3300020582	Soil	MSRRFAYAIDKRYLPLLVPFGLRGSKDGVTLTEDGSLLATFG
Ga0210401_104703131	3300020583	Soil	MSKHFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGCLLATFGFFKIK
Ga0210404_108018762	3300021088	Soil	MSRRFAYAIDKRYLPLLVPFGLRGSTDGVTLTDDGSLLATFGFFKIK
Ga0210405_107063981	3300021171	Soil	MSRRFAYAIDKRYLPLLLPFGLRVSKDGVTLTDDGFLLAT
Ga0210408_102806671	3300021178	Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDGGSLLATFG
Ga0210408_112923582	3300021178	Soil	MSERFGYAIDKRYLPLLLLFGLRGSKDGVTITDEGSLLATFGFVK
Ga0210396_103569513	3300021180	Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDDGCLSA
Ga0210396_106476111	3300021180	Soil	MDQHFAYAIDRRYLPVLVPFGLRPAKDGVTLTDGSFLAT
Ga0210388_118150862	3300021181	Soil	VSEHFGYAIDKRYLPVLLPFLLRPAKDGVNLTDEGSFAATFGL
Ga0210385_103584581	3300021402	Soil	MSKHFAYAIDKRYLPLLVPFGLRSSKDGVTLTDEGLLLATFGFFKIETP
Ga0210385_115359961	3300021402	Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDDGLLLATFGFFKIK
Ga0210397_101508841	3300021403	Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDDGLLLATFGFF
Ga0210397_103121061	3300021403	Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGSLSATFGFFKIK
Ga0210389_104307973	3300021404	Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDDGCLSATFGFF
Ga0210389_108578141	3300021404	Soil	VSEHFGYAIDRRYLPVLLPFLLRPARDGVELTDEGSLVAT
Ga0210389_111812222	3300021404	Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDDGLLSAT
Ga0210394_111543071	3300021420	Soil	VSEHFGYAIDKRYLPVLLPFLLRPAKDGVNLTDEGSFAATFGLF
Ga0210384_104379263	3300021432	Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGSLSATFG
Ga0210391_105391021	3300021433	Soil	MSKRFAYAIDKRYLPLLVPFGFRSSEDGVTLTDEGLLS
Ga0210390_110957511	3300021474	Soil	VSEHFGYAIDKRYLPVLLPFLLRPAKDGVNLTDEGSFAATFGLFKINTPLS
Ga0210402_107707052	3300021478	Soil	VSRRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDERLL
Ga0210409_108906372	3300021559	Soil	MSRRFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLATFGFVK
Ga0208194_10412111	3300025412	Peatland	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVMLTDEGS
Ga0208586_100029122	3300025588	Arctic Peat Soil	MMSRRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEG
Ga0208586_11242852	3300025588	Arctic Peat Soil	MMSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEG
Ga0209584_100914212	3300025878	Arctic Peat Soil	MAEHFGYDIDRRYLPVLLPFLVRPSRDGVTLTDEGSLVAT
Ga0207692_103325852	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLAT
Ga0207692_103968951	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRFGYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLATFG
Ga0207665_100175094	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRFAYAIDKRYLPLLLPFGLRVSRDGVTLTDEGFLLATFGFIK
Ga0207665_106255841	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSGRFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEG
Ga0207665_114437021	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEG
Ga0209838_10366801	3300026214	Soil	VSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGLL
Ga0209648_106185452	3300026551	Grasslands Soil	MSKRFAYAIDKRYLPLLLPFGLRGSKDVVTLTDEGSLL
Ga0209111_10407912	3300027058	Forest Soil	MDQHFAYAIDRRYLPVLLPFGLRPAKDGVTLTDGSFL
Ga0208725_10476313	3300027158	Forest Soil	MSRRFAYAIDKLYLPLLVPFGLRSSKDGVTLTDDGSL
Ga0209115_11489971	3300027567	Forest Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGIL
Ga0208565_12243622	3300027662	Peatlands Soil	VTKHFGYAIDRRYLPVLLACALRPARDGVTLTEEGS
Ga0209530_11704611	3300027692	Forest Soil	MTRHFRYAIDRRYLPLLLPLLLRPSRDGVTLTDPDFVATFGLVRIA
Ga0209074_102728241	3300027787	Agricultural Soil	MSQRFGYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLATFGFIKIK
Ga0209274_104108302	3300027853	Soil	MSRRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGSLSATFG
Ga0268264_126427041	3300028381	Switchgrass Rhizosphere	MDQHFAYAIDRRYLPVLVPFGLRPAKDGVTLTDGSFLATFGFFRLTTPRTNI
Ga0302145_100351303	3300028565	Bog	VTQHFGYDVDRRYLPVLLPFLLRPSRDGVTLTDDELFVATFGLVKV
Ga0307311_101033862	3300028716	Soil	MDQHFAYAIDRRYLPVLVPFGLRPAKDGVTLTDGS
Ga0302225_104454882	3300028780	Palsa	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDDGFL
Ga0307323_101280242	3300028787	Soil	MDQYFAYAIDRRYLPVLVPFGLRPAKDGVTLTDGSFLATFGFFRL
Ga0265338_103051423	3300028800	Rhizosphere	MAHHFGYSIDKRYLPVLLPLLLRPAKDGVTLTDDGTFVATLGFFKVET
Ga0302226_103841942	3300028801	Palsa	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGSLSATFGFFKIKTPL
Ga0307310_100487463	3300028824	Soil	MNQYFAYAIDRRYLPVLVPFGLRPAKDGVTLTDGSF
Ga0311359_106943762	3300029914	Bog	MTRQFRYAVDNRYLPVILPFGLRRRRDGVALGDDGSFVATFGF
Ga0311339_108836373	3300029999	Palsa	VSRRFAYAIDKRYLPVLVPFGLRGSKDGVTLTDEGLLLATFGFFKI
Ga0311339_115561392	3300029999	Palsa	VTQHFGYDIDRRYLPVLLPFLLRPSRDGVTLTDDR
Ga0302282_11785381	3300030045	Fen	MAEHFGYDIDRRYLPVLLPFLVRPSTDGVTLTDEGSFVATFGLL
Ga0302177_106162161	3300030053	Palsa	MVTEHFGYAIDRRYLPFLLPFLLRPARDGVTLTDEGDLVATFGLF
Ga0302176_100660092	3300030057	Palsa	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGSLS
Ga0311353_100812611	3300030399	Palsa	MTSQRFAYAIDKRYLPLLLPFGLRGSKDGVTLTSEGFLLATFGYIKIKTPLANV
Ga0311372_118991282	3300030520	Palsa	VTKFGYAIDKRYLPVLLPFLLRPSKDGVELTDEGFLVATFGLFKIV
Ga0311356_107909161	3300030617	Palsa	VSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGLLSATFG
Ga0310039_103592861	3300030706	Peatlands Soil	VTKHFGYAIDKRYLPVLLPCALRPARDGVTLTDEGSLVATFGFFKIAT
Ga0310038_1000602014	3300030707	Peatlands Soil	MSKRFAYAIDKRYLPLLVPFGLRASKDGVTLTDEGSLSA
Ga0302314_118698921	3300030906	Palsa	MTRHFEYAIDRRYLPVLLPFLLRPSRDGVTLSDHGFVATFGLVKITTP
Ga0302325_125801491	3300031234	Palsa	VSRRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGLLS
Ga0302324_1002663176	3300031236	Palsa	VSRRFAYAIDKRYLPVLVPFGLRGSKDGVTLTDEGLLLATFGFFKIKTPL
Ga0302318_104921962	3300031258	Bog	MAEHFGYDIDRRYLPVLLPLLVRPSKDGVTLTDDGSF
Ga0272434_12437152	3300031473	Rock	VTRHFGYAIDKRYLPLLVPFGLRRSKDGVTLSDDGTFLATFGFLKL
Ga0302320_119913561	3300031524	Bog	MAEHFGYDIDRRYLPVLLPFLVRPSKDGVTLTDDGSFVA
Ga0310686_1138016182	3300031708	Soil	VPEHFGYAIDKRYLPVLLPFLLRPARDGVTLTDEGSFLATFG
Ga0310686_1152976442	3300031708	Soil	VTTRRFQYAIDKRYLPMLLLMLLRPSHDGVVLTDDDLVATFGLVKIT
Ga0310686_1185595251	3300031708	Soil	MSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEG
Ga0307476_111623742	3300031715	Hardwood Forest Soil	MSRRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDDGSLSATFGFFKIK
Ga0307479_104295721	3300031962	Hardwood Forest Soil	MHEGDRTIMSKRFAYAIDKRYLPLLVPFGLRGSKDGVTLTDEGSLSATF
Ga0335072_111877751	3300032898	Soil	MPIRPAMPRRFAYAIDKRYMPLLLPFGLRPARDGVTLTDAGSLLA
Ga0335083_109927451	3300032954	Soil	MSRHFAYAIDKRYLPLLLPFGLRGSKDGVTLTDEGSLLAT
Ga0334790_040749_1693_1812	3300033887	Soil	MTQHFGYDIDRRYLPVLLPFLLRPSRDGVTLTDDGLFVAT

Hidden Markov Model


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