Metagenome / Metatranscriptome Family F078669

Basic Information
Family ID	F078669
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	50 residues
Representative Sequence	AARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Number of Associated Samples	101
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	18.10 %
% of genes from short scaffolds (< 2000 bps)	18.10 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (87.069 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (38.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.138 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.33% β-sheet: 0.00% Coil/Unstructured: 41.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00483	NTP_transferase	22.41
PF01709	Transcrip_reg	15.52
PF01965	DJ-1_PfpI	9.48
PF13278	Obsolete Pfam Family	9.48
PF13473	Cupredoxin_1	3.45
PF00069	Pkinase	1.72
PF07883	Cupin_2	0.86
PF01152	Bac_globin	0.86
PF11361	DUF3159	0.86
PF12708	Pectate_lyase_3	0.86
PF00498	FHA	0.86
PF01174	SNO	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	15.52
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.90
COG0118	Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH	Amino acid transport and metabolism [E]	0.86
COG0311	Pyridoxal 5'-phosphate synthase subunit PdxT (glutamine amidotransferase)	Coenzyme transport and metabolism [H]	0.86
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.86

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.07 %
All Organisms	root	All Organisms	12.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.07 %
cellular organisms	root	All Organisms → cellular organisms	12.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.07 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.07 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	6.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.07 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	6.90 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.07 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	6.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.07 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	6.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.07 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	6.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0667004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	656	Open in IMG/M
3300000956\|JGI10216J12902_101258550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	935	Open in IMG/M
3300000956\|JGI10216J12902_103259018	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300000956\|JGI10216J12902_105025081	Not Available	967	Open in IMG/M
3300004114\|Ga0062593_103156520	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300004156\|Ga0062589_101063931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300005165\|Ga0066869_10081654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	620	Open in IMG/M
3300005440\|Ga0070705_101368692	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005468\|Ga0070707_101158534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	739	Open in IMG/M
3300005548\|Ga0070665_102391215	Not Available	531	Open in IMG/M
3300005843\|Ga0068860_101924671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	613	Open in IMG/M
3300007076\|Ga0075435_101752240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	545	Open in IMG/M
3300009098\|Ga0105245_11208118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	804	Open in IMG/M
3300009176\|Ga0105242_12396573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300012003\|Ga0120163_1021928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1859	Open in IMG/M
3300012532\|Ga0137373_11217396	Not Available	530	Open in IMG/M
3300013296\|Ga0157374_11427712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	715	Open in IMG/M
3300017792\|Ga0163161_11484754	Not Available	594	Open in IMG/M
3300020081\|Ga0206354_10775656	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300028718\|Ga0307307_10288321	Not Available	528	Open in IMG/M
3300028884\|Ga0307308_10249514	Not Available	850	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.41%
Host-Associated	Host-Associated	26.72%
Engineered	Engineered	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.66%
Plants	Host-Associated → Plants	26.72%
Aquatic	Environmental → Aquatic	7.76%
Solid Waste	Engineered → Solid Waste	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.76%
Freshwater	Environmental → Aquatic → Freshwater	4.31%
Sediment	Environmental → Aquatic → Sediment	3.45%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.86%
Grass	Engineered → Solid Waste → Grass	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.07%
Loam	Environmental → Terrestrial → Soil → Loam	7.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.17%
Ice	Environmental → Aquatic → Freshwater → Ice	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.45%
Sand	Environmental → Terrestrial → Soil → Sand	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.86%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%
Composting	Engineered → Solid Waste → Grass → Composting	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.86%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	6.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	3.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.86%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.86%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013427	Permafrost microbial communities from Nunavut, Canada - A15_35cm_18M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014031	Permafrost microbial communities from Nunavut, Canada - A35_80cm_0.25M	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4MG_02944780	2170459019	Switchgrass, Maize And Mischanthus Litter	ASETETAALRRAYAKAGLTSGSPYEKRRSLCRIARQRGWI
ICCgaii200_06670042	2228664021	Soil	LAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
ICChiseqgaiiFebDRAFT_136919831	3300000363	Soil	GTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
JGI10214J12806_112382341	3300000891	Soil	RLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
JGI1027J12803_1048997243	3300000955	Soil	DELPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
JGI10216J12902_1012585501	3300000956	Soil	AGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
JGI10216J12902_1027777171	3300000956	Soil	LDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
JGI10216J12902_1032590181	3300000956	Soil	VVEALCAGWLAGGSLDDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
JGI10216J12902_1050250811	3300000956	Soil	WLAGGSLDDLPTNEEIASRLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
soilL1_100536132	3300003267	Sugarcane Root And Bulk Soil	MSNEQIAAQLGTPGATGTVKAALRRIYAKAGLSDEPAHAKRRALCRIARQNGWI*
Ga0062593_1031565202	3300004114	Soil	CSGWLAGGSLDDLPTNEEIASRLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0062593_1032476821	3300004114	Soil	IAAQLGTPGATGTVKAALRRIYAKAGLSNQPAHSKRRALCRVARQNGWI*
Ga0062593_1035033631	3300004114	Soil	IAAQLGTPGATGTIKAALRRIYAKAGLSDQPAHAKRRALCRVARQNGWI*
Ga0062589_1010639311	3300004156	Soil	GWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0062594_1008781081	3300005093	Soil	GATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0066869_100816541	3300005165	Soil	CAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0066672_108536901	3300005167	Soil	TPGATGTVKAALRRIYAKAGISDQPAHAKRRALCRIARQRGWV*
Ga0070669_1010822352	3300005353	Switchgrass Rhizosphere	IAAELGTPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0070671_1008563501	3300005355	Switchgrass Rhizosphere	LPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0070705_1013686921	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GWLAGGSLDDLPTNDEIASRLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0070705_1017956241	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PGATGTVKAALRRIYAKAGLSDEPAHAKRRALCRVARQRGWV*
Ga0070700_1016562021	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PGATETVKAALRRAYAKAGLTDGSPYAKRRALCKIARQRGWV*
Ga0070685_107681602	3300005466	Switchgrass Rhizosphere	DDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0070707_1011585341	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GSLDDLPTNDEIASRLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0070741_112657852	3300005529	Surface Soil	LGTPGATETVKAGLRRAYAKAGLTTGTPYAKRRALCKIARQRGWV*
Ga0070672_1004985611	3300005543	Miscanthus Rhizosphere	TGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0070665_1023912152	3300005548	Switchgrass Rhizosphere	GGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0066704_110396712	3300005557	Soil	PGATGTVKAALRRIYAKAGISDQPAHAKRRALCRIARQRGWV*
Ga0066670_103146401	3300005560	Soil	PGATGTVKAALRRIYAKAGLSDQPSHAKRRALCRVARQRGWV*
Ga0070664_1017576121	3300005564	Corn Rhizosphere	TNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0068859_1008531851	3300005617	Switchgrass Rhizosphere	VKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0066905_1009640882	3300005713	Tropical Forest Soil	EIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0066903_1050631081	3300005764	Tropical Forest Soil	LPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0068860_1019246711	3300005843	Switchgrass Rhizosphere	VVEALCAGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0066651_104706451	3300006031	Soil	AAMLGTPGATGTVKAALRRIYSKAGLSDQPSHAKRRALCRVARQRGWV*
Ga0074062_129016132	3300006606	Soil	GTPGATGTVKAALRRIYAKAGLSNQPAHAKRRALCRVARQRGWV*
Ga0066660_106198161	3300006800	Soil	ELGTPGATGTVKAALRRIYAKAGLSDEPAHAKRRALCRIARQRGWL*
Ga0066660_110232782	3300006800	Soil	KAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0075434_1021817612	3300006871	Populus Rhizosphere	DDLPTNDEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0075424_1022230082	3300006904	Populus Rhizosphere	SNEQIAVELGTPGAVGTVKAALRRVYAKAGLSEQPAHAKRRALCRVARQRGWV*
Ga0074063_101031641	3300006953	Soil	VKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0075435_1017522401	3300007076	Populus Rhizosphere	LAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0105679_109931951	3300007790	Soil	GAAETVKATLRRVYTKAGLSGMPAHAKRRALCRVARQNGWI*
Ga0066710_1024322781	3300009012	Grasslands Soil	AAELGTPGATGTVKAALSRIYAKAGISDQPAHAKRRALCRIARQRGWL
Ga0105245_112081182	3300009098	Miscanthus Rhizosphere	ALCSCWLAGWSLDDLPTNDEIAARFGAPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0105245_131061252	3300009098	Miscanthus Rhizosphere	TGTVKAALRRIYAKAGLSNQPAHAKRRALCRVARQNGWI*
Ga0066709_1032380741	3300009137	Grasslands Soil	RHIAATVGTPGATETVKAALRRWYANAGLTSGSPYAKRRALCKIARQRGWV*
Ga0105243_111482511	3300009148	Miscanthus Rhizosphere	ELGTPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0111538_106579501	3300009156	Populus Rhizosphere	TGTIKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0105242_114913072	3300009176	Miscanthus Rhizosphere	VKAARRRAYAKAGRTEGSPYAKRRALCKIARQRGWV*
Ga0105242_123965731	3300009176	Miscanthus Rhizosphere	GSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0105238_119431202	3300009551	Corn Rhizosphere	TETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0126309_107082441	3300010039	Serpentine Soil	LGTPGATGTVKAALRRIYAKAGLSGQPAHAKRRALCRIARQNGWI*
Ga0138514_1000192163	3300011003	Soil	NEQIAAQLGTPGATGTVKAALRRIYAKAGLSDEPAHAKRRALCRVARQRGWV*
Ga0105246_125949531	3300011119	Miscanthus Rhizosphere	TPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0120163_10219283	3300012003	Permafrost	RPWRDGGSLDRLPTNEEIAAELGTPGAADTVKAALRRAYAKAGLTDGPPHAKRRALCRVARQRGWI*
Ga0120134_10132023	3300012004	Permafrost	GTPGAADTVKAALRRAYAKAGLTDGPPHAKRRALCRVARQRGWI*
Ga0136621_13594841	3300012092	Polar Desert Sand	AAYLGTPDAVGSVKAGLRRTYAKAGLSELPPHAKRRALCRLGRAYGWF*
Ga0136618_104910012	3300012188	Polar Desert Sand	AAELGTPGAAETVKAALRRAYAKAGLSHLPAHAKRRALCRVARQRGWI*
Ga0137383_106167182	3300012199	Vadose Zone Soil	ATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0137376_110360171	3300012208	Vadose Zone Soil	TVKAALRRIYAKAGISDQPAHAKRRALCRIARQRGWV*
Ga0137378_109455241	3300012210	Vadose Zone Soil	TVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0137366_103976811	3300012354	Vadose Zone Soil	NEQIAAMLGTPVATGTVKAALRRIYAKASLSGQPAHTKRRALCRIARQRGWL*
Ga0137371_104403931	3300012356	Vadose Zone Soil	GATGTVKAALRRIYAKAGLAQQPAHAKRRALCRVARQRGWI*
Ga0136633_11699141	3300012527	Polar Desert Sand	EIAAHLGTPDAVGSVKAGLRRTYAKAGLSQLPPHAKRRALCRLARANGWFDRPS*
Ga0137373_112173961	3300012532	Vadose Zone Soil	VLCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWI*
Ga0164300_111752592	3300012951	Soil	KAALRRIYAKAGLSNQPSHAKRRALCRVARQNGWI*
Ga0134110_101415093	3300012975	Grasslands Soil	VKAALRRAYAKAGVSNLPAHAKRRALCRIARERGWI*
Ga0164308_108552121	3300012985	Soil	QLGTPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0157374_114277122	3300013296	Miscanthus Rhizosphere	WLAGGSLDDLPTNDEIAARLGTPGAPETVKAALRRAYARAGLPEGSPYAKRRALCKIARQRGWV*
Ga0157374_120832521	3300013296	Miscanthus Rhizosphere	ARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0120106_10284692	3300013427	Permafrost	DRLPTNEEIAAELGTPGAADTVKAALRRAYAKAGLTDGPPHAKRRALCRVARQRGWI*
Ga0120172_11024821	3300013765	Permafrost	AQLGTPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0120123_10159911	3300013770	Permafrost	AAELGTPGAADTVKAALRRAYAKAGLTDGPPHAKRRALCRVARQRGWI*
Ga0120173_10695292	3300014031	Permafrost	PGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0157377_103282942	3300014745	Miscanthus Rhizosphere	EQIAAELGTPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0120170_10983001	3300014823	Permafrost	RLGTPGATETVRAALRRAYAKAGLTEGSPYSKRRALCKIARQRGWI*
Ga0132256_1013035731	3300015372	Arabidopsis Rhizosphere	GSRDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0132257_1042112721	3300015373	Arabidopsis Rhizosphere	TPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV*
Ga0132255_1036974731	3300015374	Arabidopsis Rhizosphere	NEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV*
Ga0136617_104781782	3300017789	Polar Desert Sand	TNEEIAAQLGTPGAADTVKAALRRAYAKVGLTEGAPHAKRRALCRIARQRGWI
Ga0163161_114847542	3300017792	Switchgrass Rhizosphere	VEALCSGWLAGGSLDDLPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0187777_102241121	3300017974	Tropical Peatland	IAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0184605_101949021	3300018027	Groundwater Sediment	QLGTPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV
Ga0184605_105384562	3300018027	Groundwater Sediment	GATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV
Ga0184619_103244162	3300018061	Groundwater Sediment	NAEIATRLGTPDAAETVKAALRRAYAKAGISGLPAHTKRRALCRIARHRGWL
Ga0193704_10299111	3300019867	Soil	PSNEQIAAQLGTPGATGTVKAALRRIYAKAGLSGQPAHAKRRALCRVARQRGWV
Ga0206354_107756561	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	QVVRILCECWLTTGNLDRLPTNEEIAAELRTPGAAATVKAALRRAYAKAGISDLPPQAKRRALCRIARNHRWI
Ga0210382_103976713	3300021080	Groundwater Sediment	AQLGTPGATGTVKAALSRIYAKAGLSDQPAHAKRRALCRVARQRGWV
Ga0224712_102124103	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	AELGTPGAAATVKAALRRAYAKAGISDLPPQAKRRALCRIARNHRWI
Ga0222622_113383211	3300022756	Groundwater Sediment	LGTPGATGTVKAALRRIYAKAGLSQEPAHAKRRALCRVARQRGWI
Ga0207688_103125271	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	EIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207670_116493371	3300025936	Switchgrass Rhizosphere	ARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207704_103952182	3300025938	Miscanthus Rhizosphere	LIRSLTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207679_115040181	3300025945	Corn Rhizosphere	TPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207668_107869973	3300025972	Switchgrass Rhizosphere	AARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207708_107261641	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	TNDEIAARLGTPGATETVKAALRRAYAKAGLTDGSPYAKRRALCKIARQRGWV
Ga0207648_113693112	3300026089	Miscanthus Rhizosphere	EEIAARLGTPGAIETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0207683_113639441	3300026121	Miscanthus Rhizosphere	EEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0209473_11854613	3300026330	Soil	EEIAAKLGTPGAAGTVKAALRRAYAKAGVSNLPAHAKRRALCRIARERGWI
Ga0209808_13155492	3300026523	Soil	VKAALRRAYAKAGVSNLPAHAKRRALCRIARERGWI
Ga0209874_10010461	3300027577	Groundwater Sand	GTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV
Ga0307307_102883211	3300028718	Soil	EGASLDRLPTNEEIAVELGTPGAENTVKAALRRAYAKAGLTEGPPHAKRRALCRVARQRAWI
Ga0307319_102004812	3300028722	Soil	SNEQIAAQLGTPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV
Ga0307297_103682721	3300028754	Soil	EEIAAELGTPGAENTVKAALRRAYAKAGLTEGPPHAKRRALCRVARQRAWI
Ga0307282_101894641	3300028784	Soil	QIAAQLGTPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV
Ga0307282_104905051	3300028784	Soil	ELGTPGAENTVKAALRRAYAKAGLTEGPPHAKRRALCRVARQRAWI
Ga0307305_100248461	3300028807	Soil	TGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWV
Ga0307292_100496131	3300028811	Soil	AQLGTPGATGTVKAALRRIYAKAGLSQEPAHAKRRALCRVARQRGWI
Ga0307308_102495141	3300028884	Soil	LAGGSLEELPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYSKRRALCKIARQRGWI
Ga0307308_103982383	3300028884	Soil	QLGTPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWL
Ga0307308_105193941	3300028884	Soil	AAELGTPGATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWI
Ga0310813_103308651	3300031716	Soil	QLGTPGATGTVKAALRRIYAKAGLSNQPAHAKRRALCRVARQNGWI
Ga0310813_108814881	3300031716	Soil	LGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV
Ga0307468_1012584952	3300031740	Hardwood Forest Soil	ATGTVKAALRRIYAKAGLSDQPAHAKRRALCRVARQRGWI
Ga0310904_106229282	3300031854	Soil	LPTNEEIAARLGTPGATETVKAALRRAYAKAGLTEGSPYAKRRALCKIARQRGWV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078669

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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