Metagenome Family F078644

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078644
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	62 residues
Representative Sequence	METPAIVALIYIAIGVAIFAHPRFPLTPHDFHWRRQIDVFRGNFRDVMIWPLALWLRVAERR
Number of Associated Samples	74
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.72 %
% of genes near scaffold ends (potentially truncated)	17.24 %
% of genes from short scaffolds (< 2000 bps)	81.03 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.103 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (14.655 % of family members)
Environment Ontology (ENVO)	Unclassified (31.034 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.517 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.78% β-sheet: 0.00% Coil/Unstructured: 42.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF05222	AlaDh_PNT_N	39.66
PF01266	DAO	26.72
PF07690	MFS_1	4.31
PF02446	Glyco_hydro_77	3.45
PF00156	Pribosyltran	3.45
PF08241	Methyltransf_11	0.86
PF13374	TPR_10	0.86
PF02445	NadA	0.86
PF13561	adh_short_C2	0.86
PF03886	ABC_trans_aux	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	3.45
COG0379	Quinolinate synthase	Coenzyme transport and metabolism [H]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.10 %
Unclassified	root	N/A	31.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.10 %
Unclassified	root	N/A	31.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.10 %
Unclassified	root	N/A	31.90 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.52 %
Unclassified	root	N/A	31.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.79 %
Unclassified	root	N/A	31.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.90 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	28.45 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.86 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.90 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	12.07 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.86 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.90 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	7.76 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	4.31 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.90 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	7.76 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	4.31 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.90 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	7.76 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	4.31 %
Nonomuraea guangzhouensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea guangzhouensis	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10082326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1505	Open in IMG/M
3300004091\|Ga0062387_100806082	Not Available	700	Open in IMG/M
3300004092\|Ga0062389_100837604	All Organisms → cellular organisms → Bacteria → Proteobacteria	1101	Open in IMG/M
3300004092\|Ga0062389_100979457	All Organisms → cellular organisms → Bacteria → Proteobacteria	1030	Open in IMG/M
3300004092\|Ga0062389_102616274	Not Available	671	Open in IMG/M
3300004092\|Ga0062389_103410128	Not Available	596	Open in IMG/M
3300004635\|Ga0062388_100621039	Not Available	994	Open in IMG/M
3300005458\|Ga0070681_10423687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1243	Open in IMG/M
3300005530\|Ga0070679_100834101	Not Available	865	Open in IMG/M
3300005534\|Ga0070735_10033370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3547	Open in IMG/M
3300005534\|Ga0070735_10103609	Not Available	1791	Open in IMG/M
3300005591\|Ga0070761_11028854	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300005712\|Ga0070764_10768783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300005712\|Ga0070764_11006684	Not Available	525	Open in IMG/M
3300005921\|Ga0070766_10125262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1549	Open in IMG/M
3300005921\|Ga0070766_10672706	Not Available	699	Open in IMG/M
3300006050\|Ga0075028_100566649	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300006638\|Ga0075522_10000802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23330	Open in IMG/M
3300010048\|Ga0126373_10068371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3202	Open in IMG/M
3300010048\|Ga0126373_10195129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1958	Open in IMG/M
3300010048\|Ga0126373_10850419	Not Available	975	Open in IMG/M
3300010048\|Ga0126373_11239419	Not Available	812	Open in IMG/M
3300010343\|Ga0074044_10927827	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300010361\|Ga0126378_10144322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2415	Open in IMG/M
3300010361\|Ga0126378_11502300	Not Available	764	Open in IMG/M
3300010361\|Ga0126378_11799297	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300010362\|Ga0126377_12833398	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300010371\|Ga0134125_12024973	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300010376\|Ga0126381_100074808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4239	Open in IMG/M
3300010376\|Ga0126381_102934869	Not Available	678	Open in IMG/M
3300010376\|Ga0126381_104489139	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300010396\|Ga0134126_10915337	Not Available	986	Open in IMG/M
3300011404\|Ga0153951_1075150	Not Available	612	Open in IMG/M
3300012078\|Ga0153999_1056006	Not Available	757	Open in IMG/M
3300012180\|Ga0153974_1023160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1337	Open in IMG/M
3300012944\|Ga0137410_10660104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	869	Open in IMG/M
3300014168\|Ga0181534_10862544	Not Available	539	Open in IMG/M
3300014169\|Ga0181531_10411600	All Organisms → cellular organisms → Bacteria → Proteobacteria	832	Open in IMG/M
3300014169\|Ga0181531_10892763	Not Available	556	Open in IMG/M
3300014495\|Ga0182015_10015709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	6449	Open in IMG/M
3300014495\|Ga0182015_10231328	Not Available	1226	Open in IMG/M
3300014501\|Ga0182024_10001945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	52116	Open in IMG/M
3300014501\|Ga0182024_10014905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	14967	Open in IMG/M
3300014501\|Ga0182024_11111863	Not Available	932	Open in IMG/M
3300015245\|Ga0137409_10462856	Not Available	1089	Open in IMG/M
3300017822\|Ga0187802_10255796	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300017972\|Ga0187781_10020415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4621	Open in IMG/M
3300018007\|Ga0187805_10413045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea guangzhouensis	627	Open in IMG/M
3300018062\|Ga0187784_10002950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	13712	Open in IMG/M
3300018086\|Ga0187769_10905949	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300018088\|Ga0187771_10001501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	15629	Open in IMG/M
3300018088\|Ga0187771_11871188	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300020582\|Ga0210395_10065071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2676	Open in IMG/M
3300020582\|Ga0210395_10397867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1036	Open in IMG/M
3300021178\|Ga0210408_10304600	Not Available	1271	Open in IMG/M
3300021181\|Ga0210388_11281237	Not Available	619	Open in IMG/M
3300021358\|Ga0213873_10121585	Not Available	767	Open in IMG/M
3300021401\|Ga0210393_10232414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1494	Open in IMG/M
3300021401\|Ga0210393_10845762	Not Available	744	Open in IMG/M
3300021402\|Ga0210385_11531136	Not Available	509	Open in IMG/M
3300021403\|Ga0210397_10311567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1158	Open in IMG/M
3300021407\|Ga0210383_10377487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1223	Open in IMG/M
3300021407\|Ga0210383_11064164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300021420\|Ga0210394_11827662	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300021432\|Ga0210384_10671958	All Organisms → cellular organisms → Bacteria → Proteobacteria	928	Open in IMG/M
3300021433\|Ga0210391_10719296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300021433\|Ga0210391_10909342	Not Available	686	Open in IMG/M
3300021479\|Ga0210410_10538632	All Organisms → cellular organisms → Bacteria → Proteobacteria	1041	Open in IMG/M
3300021560\|Ga0126371_10099577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2893	Open in IMG/M
3300021560\|Ga0126371_10358716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1594	Open in IMG/M
3300021560\|Ga0126371_10679343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1178	Open in IMG/M
3300021560\|Ga0126371_11233154	Not Available	883	Open in IMG/M
3300021560\|Ga0126371_11250178	Not Available	877	Open in IMG/M
3300021560\|Ga0126371_12577759	Not Available	616	Open in IMG/M
3300022840\|Ga0224549_1027377	Not Available	776	Open in IMG/M
3300025627\|Ga0208220_1007593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3809	Open in IMG/M
3300025633\|Ga0208480_1042100	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1227	Open in IMG/M
3300027648\|Ga0209420_1215965	Not Available	504	Open in IMG/M
3300027867\|Ga0209167_10010849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4324	Open in IMG/M
3300027908\|Ga0209006_10286933	Not Available	1408	Open in IMG/M
3300027986\|Ga0209168_10128083	Not Available	1296	Open in IMG/M
3300028780\|Ga0302225_10370383	Not Available	675	Open in IMG/M
3300029944\|Ga0311352_10361679	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
3300030053\|Ga0302177_10031016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3346	Open in IMG/M
3300030524\|Ga0311357_10788042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	855	Open in IMG/M
3300031231\|Ga0170824_109122866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	650	Open in IMG/M
3300031233\|Ga0302307_10509726	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300031234\|Ga0302325_11328071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	943	Open in IMG/M
3300031234\|Ga0302325_11795295	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300031234\|Ga0302325_12132414	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300031236\|Ga0302324_101981514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300031236\|Ga0302324_102701891	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300031241\|Ga0265325_10230532	Not Available	844	Open in IMG/M
3300031595\|Ga0265313_10054390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1901	Open in IMG/M
3300031708\|Ga0310686_103742530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	763	Open in IMG/M
3300031708\|Ga0310686_109066127	Not Available	530	Open in IMG/M
3300031708\|Ga0310686_116644555	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300031708\|Ga0310686_119487901	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300031715\|Ga0307476_10459101	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300031715\|Ga0307476_10488935	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300031715\|Ga0307476_11426779	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300032515\|Ga0348332_12660098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300032515\|Ga0348332_14253751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300032770\|Ga0335085_10001750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	43893	Open in IMG/M
3300032770\|Ga0335085_10676649	All Organisms → cellular organisms → Bacteria → Proteobacteria	1151	Open in IMG/M
3300032895\|Ga0335074_10026239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	8202	Open in IMG/M
3300032895\|Ga0335074_10029669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7671	Open in IMG/M
3300032895\|Ga0335074_10124044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3338	Open in IMG/M
3300032895\|Ga0335074_10449956	All Organisms → cellular organisms → Bacteria → Proteobacteria	1366	Open in IMG/M
3300032895\|Ga0335074_10888124	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300032896\|Ga0335075_10009513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14816	Open in IMG/M
3300032896\|Ga0335075_10314429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1738	Open in IMG/M
3300032898\|Ga0335072_11198775	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300032954\|Ga0335083_10622604	Not Available	886	Open in IMG/M
3300033134\|Ga0335073_10130484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3209	Open in IMG/M
3300033486\|Ga0316624_10396055	All Organisms → cellular organisms → Bacteria → Proteobacteria	1153	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.83%
Host-Associated	Host-Associated	5.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.62%
Aquatic	Environmental → Aquatic	11.21%
Plants	Host-Associated → Plants	2.59%
Fungi	Host-Associated → Fungi	2.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.41%
Freshwater	Environmental → Aquatic → Freshwater	10.34%
Peat	Environmental → Terrestrial → Peat	9.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.59%
Mycelium	Host-Associated → Fungi → Mycelium	2.59%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.72%
Sediment	Environmental → Aquatic → Sediment	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.48%
Loam	Environmental → Terrestrial → Soil → Loam	7.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.03%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.31%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.59%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	2.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.03%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.31%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.59%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.59%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	2.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.86%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300012078	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC083 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_100823262	3300004080	Bog Forest Soil	METPAIIALIYIAIGAGIFANPPRPATPGDFHWRRQILVFRSNFRDVLIWPLALWLRVAERR*
Ga0062387_1008060822	3300004091	Bog Forest Soil	MGTMETPAIIALIYIAIGAAIFAHPPMPLTPGDFHWRRQINVFRGNFRDVMIWPLALWLLVAERR*
Ga0062389_1008376042	3300004092	Bog Forest Soil	METPAIIALIYLAIGAGIFAHPPMPAAPGDFHWRRQIIVFRSNFRDVLIWPLALWLRVAERR*
Ga0062389_1009794571	3300004092	Bog Forest Soil	MEIPVIIALIYIAIGVAIFAHPPMPLTLRDFHWRRQIDVFRGNFRDVMIWPLALWLLVAERR*
Ga0062389_1026162742	3300004092	Bog Forest Soil	METPAIVALIYLAIGVAIFAHPRSPMTPRDFHWRQQISVFRSNFRDVMIWPLALWLLVAERR*
Ga0062389_1034101281	3300004092	Bog Forest Soil	MGTMETPAIIALIYIAIGAAIYAHPPIPFSPQDFHWRRQMAIFRANFRDVMVWPLALWLWAAERR*
Ga0062388_1006210391	3300004635	Bog Forest Soil	METPAIIALIYIAIGAAIYAHPPIPFSPQDFHWRRQMAIFRANFRDVMVWPLALWLWAAERR*
Ga0070681_104236872	3300005458	Corn Rhizosphere	METPIILVLVYLAIGVACFAHPPVPAAPDDFNWRRQIDIFRGNFLDVLIWPLALYRFLASFR*
Ga0070679_1008341011	3300005530	Corn Rhizosphere	APASRRLGDMGTMETPIILVLVYLAIGVACFAHPPVPAAPDDFNWRRQIDIFRGNFLDVLIWPLALYRFLASFR*
Ga0070735_100333702	3300005534	Surface Soil	METPAIIALIYIAIGAGIFTMPPRPATPNDFHWRAQIDVFRTNFRDVLIWPITLWERLSGRV*
Ga0070735_101036092	3300005534	Surface Soil	MELPAIVALIYVAIGVAIFAHPRLPFTPHDFHWRRQIDVFRGNFRDVMIWPLALYLLVTERR*
Ga0070761_110288541	3300005591	Soil	METPAIIALIYIAIGVAIYAHPPFPMTPNDFHWRRQIDVFRANFRDVLVWPLALWLRVAERR*
Ga0070764_107687831	3300005712	Soil	MEIPAIVGLIYVAIGAAIFAHPRLPFTARDFHWRRQINVFRSNFRDVMIWPLALYLLAVERR*
Ga0070764_110066841	3300005712	Soil	MEIPAIIALIYVAIGAGIFTLPPVPATSDDFHWRRQIDVFRANLVDVLIWPIALWERFYR
Ga0070766_101252622	3300005921	Soil	MGYAVLPAARIYVAIGAAVFAHPPAPTTIHHLNWRRQFDVFANLADVLAWPVVLRKWFTC
Ga0070766_106727061	3300005921	Soil	METPAIVALIYLAIGVAIFAHPRSPMTPRDFHWRQQISVFRSNFRDVMIWPLALWLLVA
Ga0075028_1005666492	3300006050	Watersheds	METPAIIALVYLAIGAGLFALPPMPATPSDFHWRRQIDLFRTSLVDVLVWPVALWERRSGRF*
Ga0075522_100008026	3300006638	Arctic Peat Soil	METPAIIALIYIAIGAAIFAHPRMPMTPHDFHWRRQIEIFRGNFRDVLVWPLAVWLWVAERR*
Ga0126373_100683711	3300010048	Tropical Forest Soil	MEIPAIVGLIYVAIGVAIFATPRLPLTLDDFHWRPQIAAFRRNFRDVMIWPLALYLLVAARS*
Ga0126373_101951293	3300010048	Tropical Forest Soil	AIGVAIFAHPRFPLTPQDFHWRHQIAVFRDNFRDVLVWPLALWLWVAERRS*
Ga0126373_108504192	3300010048	Tropical Forest Soil	METPAIVALVYVAIGVAIFAHPRFPLTPQDFHWRHQIAVFRDNFRDVLIWPLALWLWVAERRL*
Ga0126373_112394192	3300010048	Tropical Forest Soil	MELPAIVGLIYVAIGAAIFAHPRLPFTPHDFHWRRQIEVFRRNFRDVMIWPLALYLLVSERR*
Ga0074044_109278272	3300010343	Bog Forest Soil	METPAIIALIYLAIGAGIFANPPRPATPGDFHWRRQILVFRSNFRDVLIWPLALWLRVAERR*
Ga0126378_101443223	3300010361	Tropical Forest Soil	METPAIVALVYVAIGVAIFAHPRFPLTPQDFHWRHQIAVFRDNFRDVLIWPLALWLWVAERRS*
Ga0126378_115023001	3300010361	Tropical Forest Soil	METPAVVALIYIAIGAAIFAHPRFPLTPQDFHWRYQIVVFRDNFRDVLIWPLALWLRVAARWS*
Ga0126378_117992972	3300010361	Tropical Forest Soil	METPAVVALIYIAIGVAIFAHPRFPLTPHDFHWRRQIEVFRGNFRDVMIWPLALWLLVAERR*
Ga0126377_128333982	3300010362	Tropical Forest Soil	VYLAIGAGLFTLPPMPATPGDFHWRRQIDLFRANLLDVLVWPVALWERYSGRL*
Ga0134125_120249732	3300010371	Terrestrial Soil	MGTMETPVILALVYLAIGAACFAHPPVGATPDDFNWRRQIDVFRGNFLDVLIWPLALYRFLAGFR*
Ga0126381_1000748085	3300010376	Tropical Forest Soil	METPAIVALVYVAIGVAIFAHPRFPLTPQDFHWRHQIAVFRDNFRDVLIWPLALWLRVAARWS*
Ga0126381_1029348692	3300010376	Tropical Forest Soil	MELPAIVGLIYIAIGVAIFAHPRLPFTPHDFHWRRQIEVFRRNFRDVMIWPLALYLLVSERR*
Ga0126381_1044891391	3300010376	Tropical Forest Soil	METPAIVALVYVAIGVAIFAHPRFPLTPQDFHWRHQIAVFRDNFRDVLVWPLALWLWVAERRS*
Ga0134126_109153372	3300010396	Terrestrial Soil	MGTMETPIILVLVYLAIGVACFAHPPVPAAPDDFNWRRQIDIFRGNFLDVLIWPLALYRFLASFR*
Ga0153951_10751502	3300011404	Attine Ant Fungus Gardens	MELPAIVALIYVAIGVAIFAHPRLPFTPRDFHWRRQIDVFRGNFRDVMIWPLALYLLVTERR*
Ga0153999_10560063	3300012078	Attine Ant Fungus Gardens	MEIPAILALIYVAIGVAIFAHPRLPLTPHDFHWRRQIDVFRGNFRDVMIWPLALWLLVAERR*
Ga0153974_10231602	3300012180	Attine Ant Fungus Gardens	MELPAIIALIYITIGVAIFAHPPMPLTLHDFHWRRQIGVFRKNFRDVMIWPLALWLWAAERR*
Ga0137410_106601042	3300012944	Vadose Zone Soil	MGTMETPAIIALVYIAIGAALFSHPQSPMTPQDFHWRRQIAIFRDNFRDVMIWPLALWLWVAARR*
Ga0181534_108625441	3300014168	Bog	MGTMETPAIIALIYIAIGAAIYAHPPTPFSPQDFHWRRQIEIFRANFRDVMVWPLALWLWAAERR*
Ga0181531_104116001	3300014169	Bog	MGTMETPTIIALIYVAIGAALFAHPPLPATPEDFHWRRQMIVFRSNFRDVLIWPVALWEWVASLR*
Ga0181531_108927632	3300014169	Bog	METPAIIALIYVAIGAAIFAHPPAPASFYDFHWRRQVEFFRASLVDVLVWPLALWERFGR
Ga0182015_100157096	3300014495	Palsa	MGTMETPAIIALIYLAIGAAIFAHPPAPLTPGDFHWRRQIDVFRANFRDVIIWPLALWIWVAERR*
Ga0182015_102313282	3300014495	Palsa	MGTMETPAIIALIYVAIGAAIFAHPPMPATANDFHWRRQIDVFRNNFRDVLIWPLALWLWVAERR*
Ga0182024_1000194533	3300014501	Permafrost	METPAIIALVYIAIGAAIFTRPPMPATPDDFHWRRQIHVFRANLVDVLIWPVALWERFSGRL*
Ga0182024_100149057	3300014501	Permafrost	METPAIIALVYLAIGVAIFAHPALPFTPHDFHWRRQIDVFRKNFRDVLIWPLALGLLIAERR*
Ga0182024_111118632	3300014501	Permafrost	METPAIIALIYVAIGVAIFAHPRSPMTPHDFHWRRQIEVFRGNFRDVMIWPLALWLLVAERR
Ga0137409_104628563	3300015245	Vadose Zone Soil	MGTMETPAIIALVYIAIGAALFAHPQSPMTPQDFHWRRQIAIFRDNFRDVMIWPLALWLWVAARR*
Ga0187802_102557962	3300017822	Freshwater Sediment	MEVPAIIALIYIAIGVAIFAHPSMPLTLHDFHWRRQISVFRENFRDVMIWPLALWLWAAERR
Ga0187781_100204152	3300017972	Tropical Peatland	METPAIVGLIYVAIGVAIFAHPRLPFTAQDFHWRRQIDVFRSNFRDVMIWPLALYLLVAERR
Ga0187805_104130452	3300018007	Freshwater Sediment	MEVPAIIALIYIAIGVAIFAHPSMPLTLHDFHWRRQIGVFRKNFRDVMIWPLALWLWAAERR
Ga0187784_100029508	3300018062	Tropical Peatland	METPAIVGLIYVAIGVAIFAHPRRPFTAQDFHWRRQIDVFRSNFRDVMIWPLALYLLVAERR
Ga0187769_109059491	3300018086	Tropical Peatland	MEIPAIIALIYIAIGVAIFAHPPMPLTLHDFHWRRQIGVFRENFRDVMIWPLALWLWAAERR
Ga0187771_100015015	3300018088	Tropical Peatland	MEIPAIIALIYIAIGVAIFAHPPMPLTLHDFHWRRQISVFRENFRDVMIWPLALWLWAAERR
Ga0187771_118711881	3300018088	Tropical Peatland	MTMETPAIVALIYIAIGVAIFAHPKLPFPPHDFHWRRQIDIFRNNFRDVMIWPLALWLLVAERR
Ga0210395_100650712	3300020582	Soil	MEIPAILALIYVAIGVAIFAHPRLPLTPHDFHWRRQIDVFRGNFRDVMIWPLALWLLVAERR
Ga0210395_103978672	3300020582	Soil	METPAIIALVYIAIGVGLFTLPPVTATPGDFHWRRQIEVFRANLVDVLVWPIALWERYSGRF
Ga0210408_103046001	3300021178	Soil	METPAIVALVYVAIGVAIFAHPRFPLTPQDFHWRHQLAVFRDNFRDVLIWPLA
Ga0210388_112812371	3300021181	Soil	METPAIVALIYLAIGVAIFAHPRSPMTPRDFHWRQQISVFRSNFRDVMIWPLALWLLVAERR
Ga0213873_101215851	3300021358	Rhizosphere	METPAIIALIYIAIGAAIFAHPRLPLTPHDFHWRRQIDIFRRNFRDVLIWPLAVWL
Ga0210393_102324142	3300021401	Soil	MGTMETPAIIALIYIAIGAAIFAHPPAPLTPGDFHWRRQIAIFRGNFRNVMIWPLALWLLVAERR
Ga0210393_108457622	3300021401	Soil	METPAIVALVYVAIGVAIFAHPRFPLTPQDFHWRHQLAVFRDNFRDVLIWPLALWLWVAERRS
Ga0210385_115311361	3300021402	Soil	MEIPAIVGLIYVAIGAAIFAHPRLPFTARDFHWRRQINVFRSNFRDVMIWPLALYLLAVERR
Ga0210397_103115672	3300021403	Soil	METPAIIALIYIAIGAAIFAHPPAPLTPGDFHWRRQIAIFRGNFRNVMIWPLALWLLVAERR
Ga0210383_103774872	3300021407	Soil	METPAIIALVYIAIGVGFFTLPPVTATPGDFHWRRQIEVFRANLVDVLVWPIALWERYSGRF
Ga0210383_110641642	3300021407	Soil	LAAFRNMGTMETPAIIALIYIAIGAAIFAHPPAPLTPGDFHWRRQIAIFRGNFRNVMIWPLALWLLVAERR
Ga0210394_118276622	3300021420	Soil	YRLRPAQLAAFRNMGTMETPAIIALIYIAIGVAIFAHPRPPMTPQDFHWRRQIDVFRANFRDVMVWPLALWLRVAERR
Ga0210384_106719582	3300021432	Soil	METPAIIALVYLAIGVVFFAHPPAPPIPEDFHWRRQLRVFRANLVDVLVWPLTLWQLVTDSR
Ga0210391_107192962	3300021433	Soil	SSMETPAIVALIYLAIGVAIFAHPRSPMTPRDFHWRQQISVFRSNFRDVMIWPLALWLLVAERR
Ga0210391_109093422	3300021433	Soil	METPAIIALIYVAIGAAIFAHPPAPPTFHDFHWRRQFDVFRANLVDVLVWPVALWERFAR
Ga0210410_105386322	3300021479	Soil	METPAIIALVYIAIGVGLFTLPPATATPGDFHWRRQIEVFRANLVDVLVWPIALWERYSGRF
Ga0126371_100995771	3300021560	Tropical Forest Soil	METPAIVALVYVAIGVAIFAHPRFPLTPQDFHWRHQIAVFRDNFRDVLVWPLALWLWVAERRS
Ga0126371_103587162	3300021560	Tropical Forest Soil	METPAVVALIYIAIGVAIFAHPRFPLTPHDFHWRRQIEVFRGNFRDVMIWPLALWLLVAERR
Ga0126371_106793432	3300021560	Tropical Forest Soil	MEIPAIVGLIYVAIGVAIFATPRLPLTLDDFHWRPQIAAFRRNFRDVMIWPLALYLLVAARS
Ga0126371_112331542	3300021560	Tropical Forest Soil	METPAIVALVYIAVGVAIFAHPRFPLNPHDFHWRRQIDVFRDNFRDVLIWPLALWLWAAERR
Ga0126371_112501782	3300021560	Tropical Forest Soil	METPAIVALIYVAIGVAIFAHPRFPLTPQDFHWRHQIAVFRDNFRDVLIWPLALWLWVAERRS
Ga0126371_125777592	3300021560	Tropical Forest Soil	METPAIVALVYVAIGVAIFAHPRFPLTPQDFHWRRQIAVFRDNFRDVLIWPLAVWLLVAERR
Ga0224549_10273772	3300022840	Soil	METPAIIALIYLAIGAGIFAHPPMPAAPGDFHWRRQIIVFRSNFRDVLIWPLALWLRVAERR
Ga0208220_10075935	3300025627	Arctic Peat Soil	METPAIIALIYIAIGAAIFAHPRMPMTPHDFHWRRQIEIFRGNFRDVLVWPLAVWLWVAERR
Ga0208480_10421002	3300025633	Arctic Peat Soil	YARPPYRSWNMGTMETPAIIALIYIAIGAAIFAHPRMPMTPHDFHWRRQIEIFRGNFRDVLVWPLAVWLWVAERR
Ga0209420_12159652	3300027648	Forest Soil	MEIPAIIALIYLAIGAAIFAHPPAPATFYDFHWRRQIDVFRANLVDVLVWPVALWERYAR
Ga0209167_100108493	3300027867	Surface Soil	METPAIIALIYIAIGAGIFTMPPRPATPNDFHWRAQIDVFRTNFRDVLIWPITLWERLSGRV
Ga0209006_102869331	3300027908	Forest Soil	METPAIVALIYLAIGVAIFAHPRSPMTPRDFHWRQQISVFRSNFRDVMIWPLALWL
Ga0209168_101280832	3300027986	Surface Soil	MELPAIVALIYVAIGVAIFAHPRLPFTPHDFHWRRQIDVFRGNFRDVMIWPLALYLLVTERR
Ga0302225_103703831	3300028780	Palsa	METPAIIALIYLAIGAGIFAHPPMPAAPGDFHWRRQIIVFRSNFRDVLIWPLALWLRVAE
Ga0311352_103616791	3300029944	Palsa	IYLAIGAGIFAHPPMPAAPGDFHWRRQIIVFRSNFRDVLIWPLALWLRVAERR
Ga0302177_100310161	3300030053	Palsa	ETPAIIALIYLAIGAGIFAHPPMPAAPGDFHWRRQIIVFRSNFRDVLIWPLALWLRVAER
Ga0311357_107880422	3300030524	Palsa	METPAIIALIYLAIGAGIFAHPPMPAAPSDFHWRRQIIVFRSNFRDVLIWPLALWLRVAERR
Ga0170824_1091228662	3300031231	Forest Soil	METPAIIALVYIAIGVGLFTPPPVTATPGDFHWRRQIEVFRANLVDVLVWPIALWERYSGRF
Ga0302307_105097262	3300031233	Palsa	METPAIIALIYLAIGAGIFAHPPLPAAPGDFHWRRQIIVFRSNFRDVLIWPLALWLRVAERR
Ga0302325_113280712	3300031234	Palsa	METPAIIALIYIAVGAAIFAHPPMPATAHDFHWRRQIDVFRSNFRDVIIWPLALWLWVAERR
Ga0302325_117952951	3300031234	Palsa	METPAIIALVYIAIGVAIYAHPPFPMTPSDFHWRRQIDVFRANFRDVLVWPLALWIRVAERR
Ga0302325_121324142	3300031234	Palsa	METPAIVALIYIAIGVAFFAHPRLPLTPHDFHWRRQIDVFRSNFRDVMVWPVALWQWVAERR
Ga0302324_1019815141	3300031236	Palsa	MEIPAIIALIYVAIGAAIFAHPPGPATFHDFHWRRQIDVFRVNLVDVLVWPVALWERYAA
Ga0302324_1027018911	3300031236	Palsa	METPAIIALIYIAIGAAIFAHPRAPLTPHDFHWRRQIDVFRGNFLDVMVWPVALWQWVAARR
Ga0265325_102305322	3300031241	Rhizosphere	METPAIVALIYIAIGVAIFAHPRFPLTPHDFHWRRQIDVFRGNFRDVMIWPLALWLRVAERR
Ga0265313_100543902	3300031595	Rhizosphere	METPVIIALVYLAVGATIFAHPPSPATPKDFHWRRQIAVFRDNWRDVFIWPLALWLLIAERR
Ga0310686_1037425301	3300031708	Soil	METPAIVALIYIAIGAAIFTRPRLPLTPHDFHWRRQIDVFRKNFRDVLIWPLALGLLIAERL
Ga0310686_1090661271	3300031708	Soil	VETPAIIALIYLAIGAAIFAHPALPLTPHDFHWRRQIGVFRKNFRDVMIWPLALGLLIAERR
Ga0310686_1166445552	3300031708	Soil	IALIYIAIGVAIFSHPRLPMTPRDFHWRRQIDVFRANFRDVMIWPLALWLLIAEHR
Ga0310686_1194879012	3300031708	Soil	METPAIVGLIYIAIGAAIFAHPRLPFTPHDFHWRRQIDVFRRNFRDVMIWPLALYLLVTEQR
Ga0307476_104591012	3300031715	Hardwood Forest Soil	MGTMETPVILALVYLAVGAACFAHPPAPATPDDFHWRRQIDVFRYNLLDVLIWPVALWRFLASFR
Ga0307476_104889352	3300031715	Hardwood Forest Soil	MELPAIVGLVYVAIGAAIFAHPRLPFTPHDFHWRRQIDVFRRNFRDVMIWPLALYLFVVERR
Ga0307476_114267792	3300031715	Hardwood Forest Soil	MTMETPAVIALIYIAIGVAIFAHPPKPMTPHDFHWRRQIDVFRNNFRDVLIWPLAVWLWVAERR
Ga0348332_126600981	3300032515	Plant Litter	METPAIIALIYLAIGAAIFAHPALPLTPHDFHWRRQIGVFRKNFRDVMIWPLALGLLIAERR
Ga0348332_142537511	3300032515	Plant Litter	METPAIVALIYIAIGAAIFSTPRLPLTPHDFHWRRQIDVFRGNFRDVMIWPLALWLLIAERR
Ga0335085_1000175017	3300032770	Soil	METPAIVALIYVAIGVAIFAHPRFPLTPHDFHWRRQIDVFRVNFRDVMIWPLALWLLVAERR
Ga0335085_106766491	3300032770	Soil	YIAVGVAIFAHPRFPLAPHDFHWRRQIDVFRVNFRDVMIWPLALWLRVAERR
Ga0335074_100262397	3300032895	Soil	METPAILALIYVAIGVAIFAHPRLPLTPHDFHWRRQIDVFRSNFRDVMIWPLALWLLVAERR
Ga0335074_100296695	3300032895	Soil	MELPAVVALIYVAIGVAIFAHPRRPFTPHDFHWRRQIAVFRSNFRDVMIWPLALYLLVAERR
Ga0335074_101240443	3300032895	Soil	METPAIIALVYIAIGAAIFAHPPAPATVYDFHWRRQVAIFRTNLIDVLVWPVALWERLTR
Ga0335074_104499562	3300032895	Soil	MEIPAIVGLIYVAIGVAIFAHPRLPFTPHDFHWRRQLDVFRGNFRDVMIWPLALYLLAIERR
Ga0335074_108881242	3300032895	Soil	METPAILALIYVAIGVAIFAHPRLPLTPHDFHWRRQIDVFCRNFRDVMIWPLALWLLVAERR
Ga0335075_100095138	3300032896	Soil	METPAILALIYIAIGVAIFAHPRLPLTPHDFHWRRQIDVFRRNFRDVMIWPLALWLLVAERR
Ga0335075_103144292	3300032896	Soil	MELPAIVALIYVAIGVVIFAHPRLPFTPHDFHWRRQIDVFRRNFRDVMIWPLALYLFVAERR
Ga0335072_111987752	3300032898	Soil	METPAILALIYIAIGVGIFAHPRLPLTLHDFHWRRQIDIFCSNFRDVLIWPLALWLLVAERR
Ga0335083_106226041	3300032954	Soil	METPAIIALIYVAVGAAIFAHPPMPAAPGDFHWRRQVTVFWSNFRDVLIWPIALCEWFAARR
Ga0335073_101304842	3300033134	Soil	METPAIIALIYIAIGAAIFSFPPIPATPDDFHWRRQMTVFRANFRDVLIWPLALWQWLAVRR
Ga0316624_103960551	3300033486	Soil	YIAIGAAIFSHPRAPLTARDFHWRRQLDVFRENFRDVMIWPLAVWLLVAERR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078644

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences