NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F078558

Metagenome Family F078558

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F078558
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 50 residues
Representative Sequence METDFKNISGMFRTNTDIINKAIADVRPEDWFRAPGDDSNHLMWLLGH
Number of Associated Samples 89
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 95.69 %
% of genes near scaffold ends (potentially truncated) 97.41 %
% of genes from short scaffolds (< 2000 bps) 95.69 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.690 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(10.345 % of family members)
Environment Ontology (ENVO) Unclassified
(51.724 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(72.414 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.42%    β-sheet: 0.00%    Coil/Unstructured: 56.58%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF00300His_Phos_1 12.07
PF12867DinB_2 10.34
PF02321OEP 7.76
PF02541Ppx-GppA 5.17
PF00196GerE 2.59
PF05163DinB 1.72
PF13089PP_kinase_N 0.86
PF02954HTH_8 0.86
PF05235CHAD 0.86
PF04542Sigma70_r2 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 15.52
COG0248Exopolyphosphatase/pppGpp-phosphohydrolaseSignal transduction mechanisms [T] 10.34
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 1.72
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.86
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.86
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.86
COG3025Inorganic triphosphatase YgiF, contains CYTH and CHAD domainsInorganic ion transport and metabolism [P] 0.86
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.86
COG5607CHAD domain, binds inorganic polyphosphatesFunction unknown [S] 0.86


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.69 %
UnclassifiedrootN/A4.31 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2209111006|2214738113All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300002568|C688J35102_118279448All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300004114|Ga0062593_102816415All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300005271|Ga0065713_1007401All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300005290|Ga0065712_10606992All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300005293|Ga0065715_10456611All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium819Open in IMG/M
3300005334|Ga0068869_100688686All Organisms → cellular organisms → Bacteria → Acidobacteria871Open in IMG/M
3300005334|Ga0068869_100935677All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium752Open in IMG/M
3300005334|Ga0068869_100948729All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300005338|Ga0068868_101235419All Organisms → cellular organisms → Bacteria → Acidobacteria692Open in IMG/M
3300005340|Ga0070689_101633627All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300005344|Ga0070661_100331085All Organisms → cellular organisms → Bacteria1191Open in IMG/M
3300005366|Ga0070659_100908705All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium770Open in IMG/M
3300005434|Ga0070709_11203162All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300005438|Ga0070701_10158809All Organisms → cellular organisms → Bacteria → Acidobacteria1308Open in IMG/M
3300005438|Ga0070701_10654956All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300005441|Ga0070700_101316343All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300005441|Ga0070700_101579933All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300005444|Ga0070694_101045783All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300005445|Ga0070708_102134596All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005468|Ga0070707_101490147All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300005530|Ga0070679_101681464All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300005539|Ga0068853_102021934All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300005543|Ga0070672_101978657All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300005545|Ga0070695_100576914All Organisms → cellular organisms → Bacteria → Acidobacteria880Open in IMG/M
3300005547|Ga0070693_100149363All Organisms → cellular organisms → Bacteria → Acidobacteria1478Open in IMG/M
3300005549|Ga0070704_101619151All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300005564|Ga0070664_100881331All Organisms → cellular organisms → Bacteria → Acidobacteria839Open in IMG/M
3300005578|Ga0068854_100399758All Organisms → cellular organisms → Bacteria → Acidobacteria1137Open in IMG/M
3300005578|Ga0068854_100701027All Organisms → cellular organisms → Bacteria → Acidobacteria874Open in IMG/M
3300005617|Ga0068859_102036564Not Available634Open in IMG/M
3300005841|Ga0068863_101512106All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium680Open in IMG/M
3300005841|Ga0068863_102292879All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005842|Ga0068858_100685639All Organisms → cellular organisms → Bacteria → Acidobacteria997Open in IMG/M
3300005842|Ga0068858_101006651All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium817Open in IMG/M
3300006755|Ga0079222_10426692All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300006804|Ga0079221_10688114All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300006852|Ga0075433_11302524All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300006904|Ga0075424_100558374All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300009093|Ga0105240_12382563All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300009147|Ga0114129_10368837All Organisms → cellular organisms → Bacteria1898Open in IMG/M
3300009148|Ga0105243_10305938All Organisms → cellular organisms → Bacteria1442Open in IMG/M
3300009162|Ga0075423_11049794All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium867Open in IMG/M
3300009174|Ga0105241_12190385All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300009174|Ga0105241_12431134Not Available523Open in IMG/M
3300009177|Ga0105248_11427399All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium783Open in IMG/M
3300009545|Ga0105237_12784471All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300009551|Ga0105238_11919721Not Available625Open in IMG/M
3300009551|Ga0105238_12911960All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300010038|Ga0126315_10854241All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300010038|Ga0126315_11101633All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300010041|Ga0126312_10330809All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300010042|Ga0126314_10030861All Organisms → cellular organisms → Bacteria3354Open in IMG/M
3300010042|Ga0126314_10634162All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium781Open in IMG/M
3300010044|Ga0126310_10092462All Organisms → cellular organisms → Bacteria → Acidobacteria1812Open in IMG/M
3300010044|Ga0126310_10558860All Organisms → cellular organisms → Bacteria → Acidobacteria846Open in IMG/M
3300010045|Ga0126311_10626186All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300010047|Ga0126382_10969924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium742Open in IMG/M
3300010047|Ga0126382_11364697All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium644Open in IMG/M
3300010359|Ga0126376_12885051All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300010373|Ga0134128_12263757All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300010375|Ga0105239_10746842All Organisms → cellular organisms → Bacteria1120Open in IMG/M
3300010396|Ga0134126_10906421All Organisms → cellular organisms → Bacteria → Acidobacteria991Open in IMG/M
3300010399|Ga0134127_12931721All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300010399|Ga0134127_13067919All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300010400|Ga0134122_11989233All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium619Open in IMG/M
3300010401|Ga0134121_12676085All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium543Open in IMG/M
3300010401|Ga0134121_12889369All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300010403|Ga0134123_13529918All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium506Open in IMG/M
3300011119|Ga0105246_10499054All Organisms → cellular organisms → Bacteria → Acidobacteria1033Open in IMG/M
3300011119|Ga0105246_11422853All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300011119|Ga0105246_12337407All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300012961|Ga0164302_11775466All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300012989|Ga0164305_11467881All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300013100|Ga0157373_11156676All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300013100|Ga0157373_11564516All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium504Open in IMG/M
3300013102|Ga0157371_11409935All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300013296|Ga0157374_10157301All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2212Open in IMG/M
3300013297|Ga0157378_13140296All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium513Open in IMG/M
3300013307|Ga0157372_12343201All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium613Open in IMG/M
3300013307|Ga0157372_13082117All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300013308|Ga0157375_13024086All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300014325|Ga0163163_11806786All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium671Open in IMG/M
3300014326|Ga0157380_11240273All Organisms → cellular organisms → Bacteria → Acidobacteria791Open in IMG/M
3300014487|Ga0182000_10059071All Organisms → cellular organisms → Bacteria → Acidobacteria1174Open in IMG/M
3300014968|Ga0157379_10072117All Organisms → cellular organisms → Bacteria → Acidobacteria3090Open in IMG/M
3300015374|Ga0132255_105373147All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium542Open in IMG/M
3300019361|Ga0173482_10304213All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300021445|Ga0182009_10734720All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300025899|Ga0207642_10943218Not Available554Open in IMG/M
3300025900|Ga0207710_10175636All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300025900|Ga0207710_10372240All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium730Open in IMG/M
3300025907|Ga0207645_10432651All Organisms → cellular organisms → Bacteria → Acidobacteria887Open in IMG/M
3300025911|Ga0207654_11037697All Organisms → cellular organisms → Bacteria → Acidobacteria597Open in IMG/M
3300025912|Ga0207707_10108120All Organisms → cellular organisms → Bacteria → Acidobacteria2431Open in IMG/M
3300025914|Ga0207671_10506329All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300025922|Ga0207646_11173550All Organisms → cellular organisms → Bacteria → Acidobacteria674Open in IMG/M
3300025930|Ga0207701_10874810All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium754Open in IMG/M
3300025932|Ga0207690_11782067All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300025936|Ga0207670_11470214All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium579Open in IMG/M
3300025945|Ga0207679_10350223All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300025945|Ga0207679_11280351Not Available673Open in IMG/M
3300026035|Ga0207703_10038670All Organisms → cellular organisms → Bacteria → Acidobacteria3809Open in IMG/M
3300026041|Ga0207639_10332848All Organisms → cellular organisms → Bacteria → Acidobacteria1352Open in IMG/M
3300026095|Ga0207676_10731802All Organisms → cellular organisms → Bacteria → Acidobacteria961Open in IMG/M
3300026095|Ga0207676_11033536All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium811Open in IMG/M
3300026095|Ga0207676_11276609All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300026095|Ga0207676_11437344All Organisms → cellular organisms → Bacteria → Acidobacteria686Open in IMG/M
3300027909|Ga0209382_10895631All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300028380|Ga0268265_11103172All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300028380|Ga0268265_11464797All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300031716|Ga0310813_10469245All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300031716|Ga0310813_11290838All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium674Open in IMG/M
3300031716|Ga0310813_11345198All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium661Open in IMG/M
3300031740|Ga0307468_100287331All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300033412|Ga0310810_10820083All Organisms → cellular organisms → Bacteria → Acidobacteria836Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.34%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere10.34%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere7.76%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil6.90%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil6.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.03%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.17%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.31%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.31%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere4.31%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.45%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.72%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.72%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.72%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.86%
Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Miscanthus Rhizosphere0.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.86%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.86%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.86%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2209111006Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0Host-AssociatedOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005271Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample from Bulk Soil Replicate 2: eDNA_1EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
22137447362209111006Arabidopsis RhizosphereMYKVNTDIINMAIADVKNEDWFRTPGDDSNHLMWLLGHIVVHRGKVL
C688J35102_11827944823300002568SoilMETDFKNISGMFRANTDIISKAIADVRPEDWFRTPGDDSNHLMWLLGHVVIHRGQVLKTL
Ga0062593_10281641513300004114SoilMETDFKNITGIFKANTDIVNKAIADVESDHWFKKPGDDSNHLTWLMGHLIVHRG
Ga0065713_100740113300005271Miscanthus RhizosphereMEMDFANVAGMFKANTDIINKAIADVSPEHWFQKPGDDSNHLMFVLGHLVVHRGRTLNTLGVDWNAPWVP
Ga0065712_1060699223300005290Miscanthus RhizosphereMEADFKNISGMFRFNTDIIGKAIADVRNEDWFRAPGDDSNHMMWLLGHVIVHRGQVLNAIGV
Ga0065715_1045661113300005293Miscanthus RhizosphereMETDFKNISGMFRANTDIISKAIADVQPEDWFRTPGDDSNHLMWLLGHVVVHRGQVLKTLGTDW
Ga0068869_10068868613300005334Miscanthus RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHVVVHRGLVLKTIGG
Ga0068869_10093567713300005334Miscanthus RhizosphereMETDFKNISGMFRANTDIISKAIADVQPEDWFRTPGDDSNHL
Ga0068869_10094872923300005334Miscanthus RhizosphereMETSFSNIKGMFKFNTDIINKAITDVKDEDWFRTPGDDSNHLLWMLGHVVV
Ga0068868_10123541913300005338Miscanthus RhizosphereMETSFSNISGIFKINTEVINRAIADVKPEDWFRKPGDNSN
Ga0070689_10163362713300005340Switchgrass RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHVVVHRGLVLKTI
Ga0070661_10033108533300005344Corn RhizosphereMETSFSNIKGMFKFNTDIINKAIAEVKDEDWFRTPGDDSNHLLWMLGHVVVHR
Ga0070659_10090870533300005366Corn RhizosphereMETDFRNISGMFRTNTDIINRAIADVRSEDWFRKPGDDSNHLMWL
Ga0070709_1120316213300005434Corn, Switchgrass And Miscanthus RhizosphereMENGFSNVASMFKTNTDIINKAIADVAADDWFRKPGDDSNHLLWVLGHVVVHRGRTLGFL
Ga0070701_1015880933300005438Corn, Switchgrass And Miscanthus RhizosphereMETDFKNISGIYRADTDIINKAIADVSPDDWFRKPGDDSNHLMWLLGHVVVHR
Ga0070701_1065495613300005438Corn, Switchgrass And Miscanthus RhizosphereMETDFRNISGIYRTNTEIVNRAIAGIEPEHWLKQPGDDSNHLLWMLGHVVVHR
Ga0070700_10131634313300005441Corn, Switchgrass And Miscanthus RhizosphereMETSFSNIKGMYKVNTDIINMAIADVKTEDWFRTPGDDSNHLMWLLGHIVVHRGKVLTMLGADW
Ga0070700_10157993323300005441Corn, Switchgrass And Miscanthus RhizosphereMETSFSNIKGMFKFNTDIINKAIAEVKDEDWFRTPGDDSNHLLWMLGHVVIHRGMVL
Ga0070694_10104578313300005444Corn, Switchgrass And Miscanthus RhizosphereMENGFSNVASMFKTNTDIINKAIADVAADDWFRKPGDDSNHLLWVLGHVVVHRGRTLGFLGA
Ga0070708_10213459613300005445Corn, Switchgrass And Miscanthus RhizosphereMRIAQDEEAKMETSFSNIKGMYKVNTDIINMAIADVKTEDWFRTPGDDSNHLMWLLGHIVVHRGKVLTMLG
Ga0070707_10149014723300005468Corn, Switchgrass And Miscanthus RhizosphereMETDFSNIEGMFKTNTHIINKTISEVRPEDWFRNPGDDSNHLLWLLGHVVVH
Ga0070679_10168146413300005530Corn RhizosphereMETDFKNISGMFRTNTDIINKAIADVRPEDWFRAPGDDSNHLMWLLGH
Ga0068853_10202193413300005539Corn RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGH
Ga0070672_10197865713300005543Miscanthus RhizosphereMETDFKNISGIYRADTDIINKAIADVSPDDWFRKPGDDSNHLMWLLGHVVVHRGLVLKTLGGQW
Ga0070695_10057691433300005545Corn, Switchgrass And Miscanthus RhizosphereMETDFKNISGMFRNNTEIINKAIAGVSPEDWFRKPGDDSNHLMWLLGHVV
Ga0070693_10014936313300005547Corn, Switchgrass And Miscanthus RhizosphereMETDFKNISGMFRTNTDIINKAIADVRPEDWFRAPGDDSNHLMWLLGHVVVHRAQVLK
Ga0070704_10161915123300005549Corn, Switchgrass And Miscanthus RhizosphereMETDFNNISGIYRANTDIINKAIADVSPEDWFRKPGDDSNHLMWLLGHVVVHR
Ga0070664_10088133133300005564Corn RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSN
Ga0068854_10039975813300005578Corn RhizosphereMETDFKNTSGMFKFNTDIISKAIADVRDEDWFRAPGDDSNHLMWLLGHVVVHRGQVL
Ga0068854_10070102733300005578Corn RhizosphereMETDFKNTSGMFRFNTDIIGKAIDGVRTEDWFRAPGD
Ga0068859_10203656423300005617Switchgrass RhizosphereMETDFKNISGMFRNNTEIINKAIAGVSPEDWFRKPGD
Ga0068863_10151210623300005841Switchgrass RhizosphereMETDFKNISGIYRANTDIINKAIADVSPEDWFRTPGDDSNHLMWLLGHVVVHRGLVLKTLGS
Ga0068863_10229287923300005841Switchgrass RhizosphereMETSFSNIKGMFKFNTDIINKAITDVKDEDWFRTPGDDSNHLLWMLGHVVVHR
Ga0068858_10068563913300005842Switchgrass RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHVVVHRGLVLKTIGGQW
Ga0068858_10100665113300005842Switchgrass RhizosphereMETDFKNISGIYRADTDIINKAIADVSPDDWFRKPGDDSNHLMWLLGHVVVHRGLVLKT
Ga0079222_1042669233300006755Agricultural SoilMENGLHNVASIFKANTDIINKAIADVSPDDWFRQPGEDSNHLLWLMGHVIVHRGRTLN
Ga0079221_1068811413300006804Agricultural SoilMETDFKNISGMFKANTDIVNKAIAGVEADHWFKKPGDDSNHLTWVLGHLIVHRGQILKI
Ga0075433_1130252433300006852Populus RhizosphereMETDLTNIAGMFKTNTDIVDRAIADVPAEDWFRKPGDDSNHLLWV
Ga0075424_10055837413300006904Populus RhizosphereMETSFSNIKGMFKVNTDIINMALGDVKTEDWFRTPG
Ga0105240_1238256313300009093Corn RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHLVVHRGLVLKTIGGQW
Ga0114129_1036883733300009147Populus RhizosphereMETDFKNITGIFKANTDIVNKAIDGVEPDHWFKRPGDDSNHLTWMMGHLI
Ga0105243_1030593813300009148Miscanthus RhizosphereMKIAQDEEAKMETSFSNIKGMYKVNTDIINMAIADVKTEDWFRTPGDDSNHLMWLLGHIVVHRG
Ga0075423_1104979423300009162Populus RhizosphereMETDFSNIAGMFKTNTSIVNKTISEVRPEDWFRNPGDDSNHLLWLLGHLTVHRGKALKTLGQHWD
Ga0105241_1219038513300009174Corn RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHL
Ga0105241_1243113413300009174Corn RhizosphereMETDFKNISGMFRNNTEIINKAIAGVSPEDWFRKPGDD
Ga0105248_1142739913300009177Switchgrass RhizosphereMETDFKNISGIYRADTDIINKAIADVSPDDWFRKPGDDSNHLMWLL
Ga0105237_1278447113300009545Corn RhizosphereMETDFKNTSGMFKFNTDIISKAIADVRPEDWFRAPGDDSNHMMWLLGHV
Ga0105238_1191972113300009551Corn RhizosphereMEADFKNISGMFRFNTDIIGKAIADVRHEDWFRAPG
Ga0105238_1291196023300009551Corn RhizosphereMENGLHNVASIFKANTDIINKAIADVAPDDWLRQPGEDSNHLLWLMGHVIVH
Ga0126315_1085424123300010038Serpentine SoilMETDFANIAGMFKTNTEIVNKAIADVSPEHWFQKPGDDSNHLM
Ga0126315_1110163323300010038Serpentine SoilMETDFSNIAGMFKINTDIVNKAIADVSPEHWFQKPGDDSNHLMFVLGHLVVHR
Ga0126312_1033080933300010041Serpentine SoilMETDLSNIAGMFKINTDIINKAITDISPEHWFQKPG
Ga0126314_1003086143300010042Serpentine SoilMEMDFANVAGMFKANTDIINKAIADVSEEHWFKKP
Ga0126314_1063416213300010042Serpentine SoilMETDFSNIAGMFKFNTDIVNKAIADVSPEHWFKKPGDDSNHLMFVLGHL
Ga0126310_1009246213300010044Serpentine SoilMEADFKNISGMFRANTDIISKAIADVRPDDWFRKPGDDSNHLMWLLGHVVVH
Ga0126310_1055886013300010044Serpentine SoilMETSFSNISGMFRANTDIISKAIADVSPEDWFRKPGDDSNHLMWL
Ga0126311_1062618613300010045Serpentine SoilMEMDFANVAGMFKANTDIINKAIADVSEEHWFKKPGDDSNHLMFVLGHLV
Ga0126382_1096992413300010047Tropical Forest SoilLQDKEAFLETDFKNTSGMFKFNTDIISKAIADVRPEDWFRAPGDDSNHMMWLLGHVV
Ga0126382_1136469713300010047Tropical Forest SoilMETSFSNIKGMYKVNTDIINMAIADVKAEDWFRSPGDDSNHLLWLLGHVVVHR
Ga0126376_1288505123300010359Tropical Forest SoilMETDFRNISGMFRTNTDIINKAIADVRNEDWFRAPGDD*
Ga0134128_1226375713300010373Terrestrial SoilMNRKEREMETSFSNIKGMFKFNTDIINKAIANVKDEDWYRTPGDDSNHLMWMLGHVVV*
Ga0105239_1074684213300010375Corn RhizosphereMETSFSNISGIFKINTEVINRAIADVKPEDWFRKPG
Ga0134126_1090642113300010396Terrestrial SoilMETDFKNISGMFRTNTDIINKAIADVRPEDWFRAPGDDSNH
Ga0134127_1293172113300010399Terrestrial SoilMETSFSNIKGMFKFNTDIINKAITDVKTEDWFRTPGDDSNNLMWLLGHVVVHRGLVLKT
Ga0134127_1306791913300010399Terrestrial SoilMETSFSNIKGMFKFNTDIINKAIADVKTEDWFRMPGDDSNHLLWLLGHVVV
Ga0134122_1198923313300010400Terrestrial SoilMETSFSNIKGMFKFNTDIINKAIADVKTEDWFRMPGDDSNHLLWLLGHVVVHRGMVLKMLGA
Ga0134121_1267608513300010401Terrestrial SoilMLNEEAEMETSFSNIKGMFKFNTDIINKAIAEVKDEDWFRTPGDDSNHLLWMLGHVVVHRGMVL
Ga0134121_1288936913300010401Terrestrial SoilMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHVVVHR
Ga0134123_1352991813300010403Terrestrial SoilMLNEEAEMETSFSNIKGMFKFNTDIINKAIAEVKDEDWFRTPGDDSNHLLWM
Ga0105246_1049905433300011119Miscanthus RhizosphereMETSFSNISGIFKINTEVINRAIADVKHEELYRKPGDDSNHM
Ga0105246_1142285323300011119Miscanthus RhizosphereMETSFSNIKGMFKFNTDIINKAITDVKDEDWFRTPGDDSNHL
Ga0105246_1233740713300011119Miscanthus RhizosphereMETSFSNIKGMFKVNTDIINMAIADVKAEDWFRTPGDDSNHLMWLLGHIVVHRGKVL
Ga0164302_1177546613300012961SoilMFKTNTDIINKAIADVAPDDWFRKPGDDSNHLLWVLGHVV
Ga0164305_1146788123300012989SoilMETDFKNISGIYRANTDIISKAIADVRPEDWFRTPGDDSNHLMWMLGHVVVHRGLVL
Ga0157373_1115667623300013100Corn RhizosphereMETSFSNIKGMFKFNTDIINKAITDVKTEDWFRTPGNDSKN
Ga0157373_1156451623300013100Corn RhizosphereMETSFSNIKGMFKFNTDIINKAIADVKTEDWFRMPGDDSNHLL
Ga0157371_1140993513300013102Corn RhizosphereMETDFKNISGIYRADTDIINKAIADVSPDDWFRKPGDDSNHLMWLLGH
Ga0157374_1015730113300013296Miscanthus RhizosphereMETDFKNISGMFRANTDIISKAIANVQPEDWCRTPGDDSNHLMWLLGHVVVHRGQVLKT
Ga0157378_1314029613300013297Miscanthus RhizosphereMETSFSNIKGMFKFNTDIINKAIADVKSEDWFRTP
Ga0157372_1234320113300013307Corn RhizosphereMETDFKNISGMFRNNTEIINKAIAGVSPEDWFRKPGDDSNHLMWLL
Ga0157372_1308211713300013307Corn RhizosphereMETSFSNIKGMFKFNTDIINTAIADVKAEDWFRMPGDDSNHLLWLL
Ga0157375_1302408613300013308Miscanthus RhizosphereMETDFKNISGIYRANTDIINKAIADVSPEDWFRTPGDDSNHLMWLLGHV
Ga0163163_1180678613300014325Switchgrass RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHVVVHRG
Ga0157380_1124027313300014326Switchgrass RhizosphereVKVILNEEAEMETSFSNIKGMFKFNTDIINKAIAEVKDEDWFRRPGDDSNHL
Ga0182000_1005907113300014487SoilMETDFKNISGMYRTNTDIINKAIADVSPEDWFRKPGGDSNHLMWLLGHVVVHRGQVL*
Ga0157379_1007211743300014968Switchgrass RhizosphereMETSFSNISGIFKINTEVINRAIADVKPEDWFRKPGDNS
Ga0132255_10537314713300015374Arabidopsis RhizosphereMETSFSNIKGMYKVNTDIINKAIADVQTEDWFRTPGDDSNHL
Ga0173482_1030421313300019361SoilMETSFSNISGIFKINTEVINRAIADVKPEDWFRKPGDDSNHLMWLLGHLVVHRGH
Ga0182009_1073472023300021445SoilMEADFKNITGMFRFNTDIVNRAIADVEPDDWFKKPGDDSNH
Ga0207642_1094321813300025899Miscanthus RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMW
Ga0207710_1017563613300025900Switchgrass RhizosphereMETSFSNIKGMFKFNTDIINKAIAEVKDEDWFRTPGDDSNHLLWMLGHVVVHRGMVLKLF
Ga0207710_1037224013300025900Switchgrass RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHVVVHRGLVLKTM
Ga0207645_1043265133300025907Miscanthus RhizosphereMETSFSNIKGMFKFNTDIINKAIAEVKDEDWFRTPGDDSNHLMWLLGHVVVHRGLVLKTVGAD
Ga0207654_1103769713300025911Corn RhizosphereMETSFSNISGIFKINTEVINRAIADVKPEDWFRKPGDNSNHLMWLLGHLVVH
Ga0207707_1010812033300025912Corn RhizosphereMETDFRNISGMFKANTDIVNKAIAGVEADHWFKAPGDDSNHLTW
Ga0207671_1050632913300025914Corn RhizosphereMETDFRNISGMFKANTDIVNKAIAGVEADHWFKAPGDDSNHLTWVLGHLI
Ga0207646_1117355023300025922Corn, Switchgrass And Miscanthus RhizosphereMETDFSNIEGMFKTNTHIINKTISEVRPEDWFRNPGDDSNHLLWLLGHVVVHRGHVLK
Ga0207701_1087481013300025930Corn, Switchgrass And Miscanthus RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDESNHLMWLLGHVV
Ga0207690_1178206713300025932Corn RhizosphereMETDFKNISGIYRADTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHVVV
Ga0207670_1147021413300025936Switchgrass RhizosphereMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHLV
Ga0207679_1035022333300025945Corn RhizosphereMETSFSNIKGMFKFNTDIINKAIAEVKDEDWFRTPGDDSNH
Ga0207679_1128035123300025945Corn RhizosphereMETDFRNISGMFRTNTDIINRAIADVRSEDWFRKPGEDSNH
Ga0207703_1003867013300026035Switchgrass RhizosphereMETSFSNISGIFKINTEVINRAIADVKPEDWFRKPGDDSNHLMWLLGHLVVH
Ga0207639_1033284813300026041Corn RhizosphereMETDFKNISGMFRNNTEIINKAIAGVSPEDWFRKPGDDSNHLM
Ga0207676_1073180233300026095Switchgrass RhizosphereMETDFKNISGIYRADTDIINKAIADVRPEDWFRKPGDDSNHLMWLLGHVVVHRGLV
Ga0207676_1103353633300026095Switchgrass RhizosphereMETDFKNISGMFRANTDIISKAIADVQPEDWFRTPGDDSNHLMWLLGHV
Ga0207676_1127660933300026095Switchgrass RhizosphereMGEDLSNIAGMFRTNTEIVNRAIAGVPQEDWFRKPG
Ga0207676_1143734423300026095Switchgrass RhizosphereMETSFSNIKGMFKTNTDIINKAIADVKAEDWYRQPGDESNHLMWLLGHVIVHRGLV
Ga0209382_1089563123300027909Populus RhizosphereMETDFKNITGIFKANTDIVNKAIDGVEPDHWFKRPGDDSNHLTWMMGHLII
Ga0268265_1110317213300028380Switchgrass RhizosphereMETDFKNITAIFKANTDIVNKAIEGVEPDHWFRRPGDDSNH
Ga0268265_1146479733300028380Switchgrass RhizosphereMESEFTNVKGMFKINTDIVNKAIADVAADDWFRKPGDDSNHLMWV
Ga0310813_1046924513300031716SoilMLNEEAKMETSFSNIKGMFKFNTDIINKAIAEVKDEDWFRTPGDDSNH
Ga0310813_1129083823300031716SoilMETDFKNISGMFKANTDIVNKAIAGVDADHWFKAPGDDSNHLTWVLGHLIVHRGKT
Ga0310813_1134519823300031716SoilMETDFKNIAGMFKANTDIVTRAISDVEPDHWFKKPGDDSNHLTWVL
Ga0307468_10028733113300031740Hardwood Forest SoilMETSFSNIKGIYRANTDIITKAIADVKAEDWFRQPGDDSNHLMWLLGHVVVHRG
Ga0310810_1082008313300033412SoilMETDFKNISGIYRANTDIINKAIADVRPEDWFRKPGDDSNHLMWL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.