Metagenome Family F078557

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078557
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	71 residues
Representative Sequence	MKLVYAVSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWATEEGEPTCKICMDLALMTQGEIDELGKNN
Number of Associated Samples	88
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.76 %
% of genes near scaffold ends (potentially truncated)	12.93 %
% of genes from short scaffolds (< 2000 bps)	76.72 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.897 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (28.448 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.897 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.37% β-sheet: 8.16% Coil/Unstructured: 73.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00583	Acetyltransf_1	16.38
PF04030	ALO	3.45
PF02861	Clp_N	3.45
PF00293	NUDIX	2.59
PF13673	Acetyltransf_10	2.59
PF13238	AAA_18	1.72
PF13649	Methyltransf_25	1.72
PF13302	Acetyltransf_3	1.72
PF00903	Glyoxalase	1.72
PF03483	B3_4	1.72
PF04020	Phage_holin_4_2	0.86
PF01810	LysE	0.86
PF00089	Trypsin	0.86
PF09706	Cas_CXXC_CXXC	0.86
PF14285	DUF4367	0.86
PF01872	RibD_C	0.86
PF01551	Peptidase_M23	0.86
PF01594	AI-2E_transport	0.86
PF08242	Methyltransf_12	0.86
PF13174	TPR_6	0.86
PF08922	DUF1905	0.86
PF05173	DapB_C	0.86
PF00892	EamA	0.86
PF13489	Methyltransf_23	0.86
PF14325	DUF4383	0.86
PF13527	Acetyltransf_9	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	3.45
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	3.45
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.86
COG0289	4-hydroxy-tetrahydrodipicolinate reductase	Amino acid transport and metabolism [E]	0.86
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.86
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.86
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.90 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.90 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.90 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.24 %
Unclassified	root	N/A	18.10 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	38.79 %
Unclassified	root	N/A	18.10 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	19.83 %
Unclassified	root	N/A	18.10 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	12.07 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.86 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.86 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.86 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.10 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.24 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	8.62 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	3.45 %
Chloroflexi bacterium RBG_16_63_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_63_12	0.86 %
Chloroflexi bacterium HGW-Chloroflexi-10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	0.86 %
Chloroflexi bacterium HGW-Chloroflexi-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	0.86 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.86 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.86 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.10 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.24 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	8.62 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1.72 %
unclassified Anaerolineales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales	0.86 %
Roseiflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae	0.86 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.86 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.86 %
Chloroflexi bacterium RBG_16_63_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_63_12	0.86 %
Chloroflexi bacterium HGW-Chloroflexi-10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	0.86 %
Chloroflexi bacterium HGW-Chloroflexi-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.10 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.24 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	8.62 %
Roseiflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae	0.86 %
Thermanaerothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Thermanaerothrix	0.86 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.86 %
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	0.86 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.86 %
Chloroflexi bacterium RBG_16_63_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_63_12	0.86 %
Chloroflexi bacterium HGW-Chloroflexi-10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	0.86 %
Chloroflexi bacterium HGW-Chloroflexi-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.10 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.24 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	8.62 %
Thermanaerothrix daxensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Thermanaerothrix → Thermanaerothrix daxensis	0.86 %
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	0.86 %
Kouleothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix	0.86 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.86 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.86 %
Chloroflexi bacterium RBG_16_63_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_63_12	0.86 %
Chloroflexi bacterium HGW-Chloroflexi-10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	0.86 %
Chloroflexi bacterium HGW-Chloroflexi-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.10 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.24 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	8.62 %
Kouleothrix aurantiaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	0.86 %
Thermanaerothrix daxensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Thermanaerothrix → Thermanaerothrix daxensis	0.86 %
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	0.86 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.86 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.86 %
Chloroflexi bacterium RBG_16_63_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_63_12	0.86 %
Chloroflexi bacterium HGW-Chloroflexi-10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	0.86 %
Chloroflexi bacterium HGW-Chloroflexi-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0699067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1483	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2255502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1024	Open in IMG/M
3300000787\|JGI11643J11755_11728175	All Organisms → cellular organisms → Bacteria	5500	Open in IMG/M
3300000891\|JGI10214J12806_10527250	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300000956\|JGI10216J12902_102571377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2249	Open in IMG/M
3300003267\|soilL1_10177447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_63_12	1272	Open in IMG/M
3300003319\|soilL2_10057144	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300003319\|soilL2_10102905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1569	Open in IMG/M
3300003319\|soilL2_10219774	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300003993\|Ga0055468_10047204	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300003998\|Ga0055472_10094629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	829	Open in IMG/M
3300003999\|Ga0055469_10049463	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300004067\|Ga0055485_10003935	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300004114\|Ga0062593_101410210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	745	Open in IMG/M
3300004145\|Ga0055489_10008997	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300004155\|Ga0066600_10281044	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300004282\|Ga0066599_100134482	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300004480\|Ga0062592_100097807	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300005295\|Ga0065707_10603993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	688	Open in IMG/M
3300005444\|Ga0070694_101215288	Not Available	632	Open in IMG/M
3300005471\|Ga0070698_100021908	All Organisms → cellular organisms → Bacteria	6690	Open in IMG/M
3300005518\|Ga0070699_100265244	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1536	Open in IMG/M
3300005518\|Ga0070699_101653656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	586	Open in IMG/M
3300005833\|Ga0074472_10336237	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005840\|Ga0068870_10280548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1044	Open in IMG/M
3300005844\|Ga0068862_100655057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1013	Open in IMG/M
3300006049\|Ga0075417_10133569	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300006049\|Ga0075417_10219765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	904	Open in IMG/M
3300006755\|Ga0079222_10452987	All Organisms → cellular organisms → Bacteria → Terrabacteria group	918	Open in IMG/M
3300006844\|Ga0075428_100165051	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300006844\|Ga0075428_100983939	Not Available	893	Open in IMG/M
3300006844\|Ga0075428_102126844	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300006845\|Ga0075421_100144170	All Organisms → cellular organisms → Bacteria	2979	Open in IMG/M
3300006865\|Ga0073934_10010666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	11347	Open in IMG/M
3300006876\|Ga0079217_10055849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1607	Open in IMG/M
3300006876\|Ga0079217_10127559	Not Available	1193	Open in IMG/M
3300006880\|Ga0075429_100164507	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1943	Open in IMG/M
3300006894\|Ga0079215_10208664	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300006918\|Ga0079216_10013107	All Organisms → cellular organisms → Bacteria	2898	Open in IMG/M
3300006918\|Ga0079216_10086054	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300006918\|Ga0079216_11048039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300006969\|Ga0075419_10414969	Not Available	924	Open in IMG/M
3300007004\|Ga0079218_10189544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	1555	Open in IMG/M
3300007004\|Ga0079218_10614587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	996	Open in IMG/M
3300009037\|Ga0105093_10493227	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300009053\|Ga0105095_10176170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1170	Open in IMG/M
3300009100\|Ga0075418_11296800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	789	Open in IMG/M
3300009147\|Ga0114129_10003381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	22415	Open in IMG/M
3300009147\|Ga0114129_13464151	Not Available	505	Open in IMG/M
3300009148\|Ga0105243_10953641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	857	Open in IMG/M
3300009148\|Ga0105243_12747112	Not Available	533	Open in IMG/M
3300009156\|Ga0111538_11885801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	752	Open in IMG/M
3300009168\|Ga0105104_10325690	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300009789\|Ga0126307_10295935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1302	Open in IMG/M
3300009789\|Ga0126307_10528103	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300010040\|Ga0126308_10424258	Not Available	890	Open in IMG/M
3300010044\|Ga0126310_10049388	All Organisms → cellular organisms → Bacteria	2327	Open in IMG/M
3300010166\|Ga0126306_10049513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2905	Open in IMG/M
3300010166\|Ga0126306_10343394	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300010166\|Ga0126306_11528609	Not Available	554	Open in IMG/M
3300010399\|Ga0134127_10035595	All Organisms → cellular organisms → Bacteria	4019	Open in IMG/M
3300011407\|Ga0137450_1018580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1134	Open in IMG/M
3300011419\|Ga0137446_1151047	Not Available	560	Open in IMG/M
3300011422\|Ga0137425_1039822	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300012227\|Ga0137449_1106077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	611	Open in IMG/M
3300012899\|Ga0157299_10287442	Not Available	538	Open in IMG/M
3300012902\|Ga0157291_10353046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300014326\|Ga0157380_10190237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1811	Open in IMG/M
3300018052\|Ga0184638_1018617	All Organisms → cellular organisms → Bacteria	2438	Open in IMG/M
3300018053\|Ga0184626_10413382	Not Available	537	Open in IMG/M
3300018059\|Ga0184615_10048459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2365	Open in IMG/M
3300018076\|Ga0184609_10034253	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300018429\|Ga0190272_12806117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300018469\|Ga0190270_10715455	Not Available	995	Open in IMG/M
3300019377\|Ga0190264_12148055	Not Available	518	Open in IMG/M
3300019767\|Ga0190267_10783655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	630	Open in IMG/M
3300019884\|Ga0193741_1051089	Not Available	1066	Open in IMG/M
3300019884\|Ga0193741_1182474	Not Available	503	Open in IMG/M
3300021090\|Ga0210377_10625565	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300025310\|Ga0209172_10037827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	3122	Open in IMG/M
3300025935\|Ga0207709_11862825	Not Available	501	Open in IMG/M
3300025961\|Ga0207712_10073883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2460	Open in IMG/M
3300025961\|Ga0207712_11448748	Not Available	615	Open in IMG/M
3300026049\|Ga0208781_1011089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	737	Open in IMG/M
3300026116\|Ga0207674_10415806	Not Available	1299	Open in IMG/M
3300027378\|Ga0209981_1054410	Not Available	609	Open in IMG/M
3300027637\|Ga0209818_1009901	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300027639\|Ga0209387_1005026	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300027639\|Ga0209387_1065794	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300027691\|Ga0209485_1024509	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300027841\|Ga0209262_10347976	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300027873\|Ga0209814_10014119	All Organisms → cellular organisms → Bacteria	3182	Open in IMG/M
3300027880\|Ga0209481_10037813	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300027880\|Ga0209481_10079077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1564	Open in IMG/M
3300027880\|Ga0209481_10253934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	886	Open in IMG/M
3300027886\|Ga0209486_10007638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Thermanaerothrix → Thermanaerothrix daxensis	4762	Open in IMG/M
3300027886\|Ga0209486_10030507	All Organisms → cellular organisms → Bacteria	2596	Open in IMG/M
3300027886\|Ga0209486_10569438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	714	Open in IMG/M
3300028380\|Ga0268265_10109481	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300028380\|Ga0268265_10184033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1798	Open in IMG/M
3300031547\|Ga0310887_10884730	Not Available	565	Open in IMG/M
3300031548\|Ga0307408_102229056	Not Available	530	Open in IMG/M
3300031824\|Ga0307413_10310936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1199	Open in IMG/M
3300031903\|Ga0307407_10325575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1080	Open in IMG/M
3300031911\|Ga0307412_10431393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1081	Open in IMG/M
3300031995\|Ga0307409_101358190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	736	Open in IMG/M
3300032002\|Ga0307416_100981758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	947	Open in IMG/M
3300032002\|Ga0307416_101676041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	741	Open in IMG/M
3300032126\|Ga0307415_100800949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	860	Open in IMG/M
3300032126\|Ga0307415_101722873	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300032144\|Ga0315910_10325510	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1169	Open in IMG/M
3300032144\|Ga0315910_11030608	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300032157\|Ga0315912_10026222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	4726	Open in IMG/M
3300032157\|Ga0315912_10053728	All Organisms → cellular organisms → Bacteria	3188	Open in IMG/M
3300034128\|Ga0370490_0040706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1534	Open in IMG/M
3300034157\|Ga0370506_017393	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.10%
Host-Associated	Host-Associated	31.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.28%
Plants	Host-Associated → Plants	31.90%
Aquatic	Environmental → Aquatic	19.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.72%
Sediment	Environmental → Aquatic → Sediment	7.76%
Freshwater	Environmental → Aquatic → Freshwater	6.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.17%
Marine	Environmental → Aquatic → Marine	4.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.17%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.45%
Loam	Environmental → Terrestrial → Soil → Loam	3.45%
Pond	Environmental → Aquatic → Freshwater → Pond	2.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.59%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	18.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	13.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.03%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.31%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.45%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.59%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.72%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011407	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026049	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034157	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_06990672	3300000033	Soil	MRLVYAVSQQTKSKRPTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICTDLALMLEEQSKEXSSLXTGAD*
ICChiseqgaiiDRAFT_22555021	3300000033	Soil	MKLVYAVTQQMDPRRPAARHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICIDLDMMIQGETDQLGKNN*
JGI11643J11755_117281757	3300000787	Soil	MRLVYAVSQQTKSKRPTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICXDLALMLEEQSKEXSSLXTGAD*
JGI10214J12806_105272501	3300000891	Soil	MKLVYAVSQRTKSKRPTARHLDNGEGKPLCGGNGWEHFFWAPEEGEPTCKICIDLVLILESEPEKFDAKPGGGE*
JGI10216J12902_1025713774	3300000956	Soil	MKLVYAVSQRSNSKHPTVRHIDNGNGKPLCGGNGREPFFWAPEEGEPTCKICMDLALLIQDESETADSKQGNGD*
soilL1_101774471	3300003267	Sugarcane Root And Bulk Soil	MKLVYAVSQRTKSKRPTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICMDIARMLESESVAGAENNN*
soilL2_100571442	3300003319	Sugarcane Root And Bulk Soil	MMKLVYAVSQRTKSKRPTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICMDIARMLESESVAGAENNN*
soilL2_101029051	3300003319	Sugarcane Root And Bulk Soil	MKLVYAVSQWTNPKRPTARHLDNGDGKPLCGGNGRKPLLWATEEGEPTCKICIDLAMMRQSELEEVS
soilL2_102197742	3300003319	Sugarcane Root And Bulk Soil	MKLVYAVGQRAKSKRPAARHIDNGSGRPLCGGNGREPFFWAPEEGEPTCKICIDLARMLQDQPDGNHPKRVS*
Ga0055468_100472041	3300003993	Natural And Restored Wetlands	MKLVYAVSQRTKAKRLSARHIDNGEGKPLCGGNGREPFFWASEEGEPTCKICMDLAMMLRDEQDNSKSLDEDK*
Ga0055472_100946291	3300003998	Natural And Restored Wetlands	MKLVYAIPKRANSKRLTARRIDNGKGRPLCGGNGREPFFWAPEEGEPTCKICQDLAMMQREINDSAENEVSNH*
Ga0055469_100494632	3300003999	Natural And Restored Wetlands	MKLVYAVSQRTKAKRLSARHIDNGEGKPLCGGNGREPFFWASEEGEPTCKICMDLAMMLRDEQDNSKSLDVDK*
Ga0055485_100039352	3300004067	Natural And Restored Wetlands	MKLVYAVSQGTKPKSPTARHIDNGQGQPLYGGNGREPFLRASEEGEPACKICLDLTLMLASEPGRTHTRQTGGE*
Ga0062593_1014102102	3300004114	Soil	MKLVYAVSPRMDPKRPAARHLDNGEGKPMCGGNGREPLLWEPEEGEPTCKICMHLAMMIQGETDELGKNN*
Ga0055489_100089973	3300004145	Natural And Restored Wetlands	MKLVYAVSQGTKPKSPTAHHIDSGQGQPLYGGNGREPFLRASEEGEPACKICMDLTLMLASEPGRTHTRQTGGE*
Ga0066600_102810442	3300004155	Freshwater	MKLVYAVSEKTDPKRPAARHLDDGNGRPMCGGNGREPLVWAPEEGEPTCKICVDLAMMGPGETGQTEES*
Ga0066599_1001344822	3300004282	Freshwater	MKLVYAVSEKTDPKRPAARHLDDGNGRPMCGGNGREPLVWAPEEGEPTCKICVDLAMMGPGETGQTEER*
Ga0062592_1000978074	3300004480	Soil	SQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWATEEGEPTCKICMDLALMTQGEIDELGRNN*
Ga0065707_106039932	3300005295	Switchgrass Rhizosphere	MKLVYAVSPRMNPKRPAARHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICMDLAMMTHSETDKPGENN*
Ga0070694_1012152881	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKLVYAVSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWATEEGEPTCKICMDLALMTQGEIDELGKNN*
Ga0070698_1000219082	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKLVYVVSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWATEEGEPTCKICMDLALMTQGEIDELGRNN*
Ga0070699_1002652444	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWATEEGEPTCKICMDLALMTQGEIDELGRNN*
Ga0070699_1016536561	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWATEEGEPTCKICMDLALMGNGTEENKIDDVN*
Ga0074472_103362372	3300005833	Sediment (Intertidal)	MKLVYAVSQQTKAKRPVARHIDNGAGKPLCGGNGREPFFWATEEGEPTCKICMDVAMLLDSGPEQVNARPTGGE*
Ga0068870_102805481	3300005840	Miscanthus Rhizosphere	MKLVYAVSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWATEEGEPTCKICMDLALMTQGEIDELGRNN*
Ga0068862_1006550572	3300005844	Switchgrass Rhizosphere	MKLVYAVTQQMDPRRPAARHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICIDLAMMTQGETDELGKNN*
Ga0075417_101335692	3300006049	Populus Rhizosphere	LVYAVSQRANPKRPTARHVDNGNGKPLCGGNGREPFFWAPEEGEPTCKICMDLAMMVQDKPEEAGPRQTTGD*
Ga0075417_102197652	3300006049	Populus Rhizosphere	MKLVYAVSQLTEAKRPNARHIDNGEGKPLCGGNGREPFFWAPAQGEPTCKICMDLALMIDSEPEKVNAKPTGGG*
Ga0079222_104529871	3300006755	Agricultural Soil	MQLVYAVSQQTKSKRLTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICMDLTLMLEERSKDTSSTQTGGN*
Ga0075428_1001650513	3300006844	Populus Rhizosphere	MKLVYAVSQRANPKRPTAWHVDNGNGKPLCGGNGREPFFWAPEEGEPTCKICMDLAMMVQDKPEEAGPRQTTGD*
Ga0075428_1009839392	3300006844	Populus Rhizosphere	MKLVYAVSQWTNSRRPAARYLDNGEGKPLCGGNGRQPLLWATEEGEPTCKICMDLAMMIQGETDEASEK*
Ga0075428_1021268441	3300006844	Populus Rhizosphere	MQLVYAVSQQRKSKRPTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICMDLALMLEEQSKETSSLQTGAD*
Ga0075421_1001441701	3300006845	Populus Rhizosphere	MKLVYAVSQRTNSKRPAARHIDNGEGKPLCGGNGREPFFWAPAQGEPTCKICMDLALMIDSEPEKVNAKPTGGG*
Ga0073934_100106669	3300006865	Hot Spring Sediment	MKLVYAFPQGANSKRPTARHIDNGKGRPLCGGNGRESFFWAPEEGEPTCKICQDLALMMAGDDDT*
Ga0079217_100558492	3300006876	Agricultural Soil	MKLVYAVSPRTDPKHPAARHLDNGEGKPMCGGNGREPLLWASEEGEPTCKICMDLAMMGNGAENNKSVM*
Ga0079217_101275591	3300006876	Agricultural Soil	MKLVYAVSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWASEEGEPTCKICMDLAMMGHGEMDELGKNN*
Ga0075429_1001645073	3300006880	Populus Rhizosphere	MQLVYAVSQQTKSKRPTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICMDLALMLKEQSNDTSSLQTSRD*
Ga0079215_102086641	3300006894	Agricultural Soil	MKLVYAVSQWTNPKRPPARHLDNGEGKPMCGGNGRQPLLWATEEGEPTCKICMDLAMMIESETKELGANS*
Ga0079216_100131073	3300006918	Agricultural Soil	MKLVYAVSQRTDPKHPAARHLDNGEGKPMCGGNGRQPLLWASEEGEPTCKICMDLAMMGNGAENNKSVM*
Ga0079216_100860542	3300006918	Agricultural Soil	MKLVYAVSERPDLKRPAARHLDNGEGKPMCGGNGREPLLWASEEGEPTCKICIDLAMMTQGEMDELGKNN*
Ga0079216_110480392	3300006918	Agricultural Soil	MKLVYAISQRMDPKRPATRHLDNGEGKPMCGGNGREPLLWATEEGEPTCKICVDLAMMTQSETDELGENAS*
Ga0075419_104149692	3300006969	Populus Rhizosphere	YIEIQTIAKRSMKLVYAVSQWTNSRRPAARYLDNGEGKPLCGGNGRQPLLWATEEGEPTCKICMDLAMMIQGETDEASEK*
Ga0079218_101895441	3300007004	Agricultural Soil	MRLVYAVSERPDLKRPAARHLDNGEGKPMCGGNGREPLLWASEEGEPTCKICIDLAMMTQGEMDELGKNN*
Ga0079218_106145871	3300007004	Agricultural Soil	MKLVYAVSQRTKARRPTARHIDNGEGRPLCGGNGREPFFWAPEEGEPTCKICMDLALMLQDESEKSSTKQVS*
Ga0105093_104932272	3300009037	Freshwater Sediment	MKLVYAIGQWTKSNRLTARHIDNGEGKPLCGGNGREPFFWAPEKGEPTCKICVDLALMLHQGEPEKANSRQINGD*
Ga0105095_101761702	3300009053	Freshwater Sediment	MKLVYAIGQWTNSNRLTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICMDLALMLHQGEPEKANSKQINGD*
Ga0075418_112968002	3300009100	Populus Rhizosphere	MRNAMKLVYAVSQRTKSKRPTARHLDNGEGKPLCGGNGWEHFFWAPEEGEPTCKICIDLVLILESEPEKFDAKPGGGE*
Ga0114129_1000338122	3300009147	Populus Rhizosphere	LKSTGEKLVVNVYLMRKLMKLVYAVSQLTEAKRPNARHIDNGEGKPLCGGNGREPFFWAPAQGEPTCKICMDLALMIDSEPEKVNAKPTGGG*
Ga0114129_134641511	3300009147	Populus Rhizosphere	MQLVYAVSQQTKSKRPTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICMDLALMLEERSKETSSLQTGAD*
Ga0105243_109536412	3300009148	Miscanthus Rhizosphere	MDPKRPAARHLDNGEGKPMCGGNGREPLLWASEEGEPTCKICIDLAMMIQGETDQLGKNN
Ga0105243_127471121	3300009148	Miscanthus Rhizosphere	MKLVYAVSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWASEEGEPTCKICMDLATMTQGEIDELGKNN*
Ga0111538_118858011	3300009156	Populus Rhizosphere	MKLVYAVSQRPDPKRPAARHIDNGEGKPMCGGNGREPLSWASEEGEPTCKICMDLAMMTQAELDELGKNN*
Ga0105104_103256901	3300009168	Freshwater Sediment	MKLVYAIGQWTNSNRLTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICMDLALMLHQGEPEKANSRQINGD*
Ga0126307_102959352	3300009789	Serpentine Soil	MQLVYAISQQTKSKRPTARHIDNGKGKPLCGGNGREPFFWAPAEGEPTCKICMDLALMLEEQSKDTHSLQTGGD*
Ga0126307_105281032	3300009789	Serpentine Soil	MKLVYAISQQTKPSQPAARHIDNGEGKPLCGGNGREPFFWASEEGEPTCRICLDLAMMLKQEEGN*
Ga0126308_104242581	3300010040	Serpentine Soil	MQLVYAISQQTKSKRPTARHIDNGKGKPLCGGNGREPFFWAPAEGEPTCKICMDLALMLEEQSKDTRSLQTGGD*
Ga0126310_100493883	3300010044	Serpentine Soil	MKLVYAISQQTKPSQPAARHIDNGAGKPLCGGNGREPFFWASEEGEPTCRICLDLAMMRKQEEGN*
Ga0126306_100495132	3300010166	Serpentine Soil	MKLVYAVSQRTDPRRPAARHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICMDLDIMTQSKMDELGKNN*
Ga0126306_103433942	3300010166	Serpentine Soil	MKLVYAISQQTKPSQPAARHIDNGEGKPLCGGNGREPFFWASEEGEPTCRICLDLAMMRKQEEGN*
Ga0126306_115286091	3300010166	Serpentine Soil	MKLVYAVSQRTDPKHPATRHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICMDLATMGNGAENNKSVM*
Ga0134127_100355952	3300010399	Terrestrial Soil	MKLVYAVTQQMDPRRPAARHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICIDLAMMIQGETDQLGKNN*
Ga0137450_10185802	3300011407	Soil	MKLVYAVSEKTDPKRPAARHLDDGNGRPMCGGNGREPLVWAPEEGEPTCKICADLAMMGAGETGQTEER*
Ga0137446_11510471	3300011419	Soil	MKLVYAVSERTDPKRPAARHLDDGNGRPMCGGNGREPLVWAPEEGEPTCRICMDLAMMRLAETGQTEEKS*
Ga0137425_10398222	3300011422	Soil	MKLVYAVSEKMDAKRPAARHLDDGNGRPMCGGNGREPLVWAPEEGEPTCKICQDLAMMGLRETDQTEES*
Ga0137449_11060772	3300012227	Soil	MKLVYAVSEKTDPKRPAARHLDDGNGRPMCGGNGREPLVWAPEEGEPTCKICADLAMMGP
Ga0157299_102874421	3300012899	Soil	MQLVYAVSQQTNSKRPTARHIDNGQGKPLCGGNGREPFFWAPEEGEPTCKICMDLALMLEEQSKDTSSTQTGGDSG*
Ga0157291_103530461	3300012902	Soil	MDPKRPAVRHLDNGEGKPMCGSNGREPLLWAPEEGEPTCKICIDLDMMIQGETDQLGKNN
Ga0157380_101902371	3300014326	Switchgrass Rhizosphere	MKLVYAVSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWAPEEGEPTYKICMDLATMTQGEIDELGKNN*
Ga0184638_10186173	3300018052	Groundwater Sediment	MKLVYAISRWTNPKRPTARHIDNGEGKPLCGGNGREPLLWEHEEGEPTCKICLDLAIITGHGEIRSTAEINEAGK
Ga0184626_104133821	3300018053	Groundwater Sediment	MKLVYAVSQWTNAKRPTARHLDNGEGKPLCGGNGRQPLLWAPEEGEPTCKICMDLAMMGHGETKEVNEKSS
Ga0184615_100484592	3300018059	Groundwater Sediment	MRMKLVYAISQRTNSKHPTARHMDNGNGKPLCGGNGREPFFWAQEEGEPTCRICMDLAMMLPHDEPEKTDPR
Ga0184609_100342533	3300018076	Groundwater Sediment	MKLVYAISSWTNTQRPTARHIDNGQGKPLCGGNGREPLLWEHEEGEPTCKTCLDLAIITGHGEIPSTAETNEAAK
Ga0190272_128061172	3300018429	Soil	MKLVYAVSQRMDPKRPATRHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICLDLAMMCHGETDQLSE
Ga0190270_107154552	3300018469	Soil	MKLVYAVSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICIDLAMMTQSEMDELGKNN
Ga0190264_121480551	3300019377	Soil	MKLVYAVSQRTDPKHPSARHLDNGKGKPMCGGNGREPLLWAPEEGEPTCKICMDLAMMTQSEMDELGKNN
Ga0190267_107836552	3300019767	Soil	MKLVYAVSQRADPKRPAARHLDNGEGKPMCGGNGREPLLWASEEGEPTCKICLDLATMTQSEMDELGKNN
Ga0193741_10510892	3300019884	Soil	MKLVYAVSQRTDPKRPAARHLDNGEGKPMCGGNGRQTLLWAPEEGEPTCKICIDLAMMGNGDETNETAEAI
Ga0193741_11824742	3300019884	Soil	PAARHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICIDLAMMTQSEMDELGKNN
Ga0210377_106255652	3300021090	Groundwater Sediment	MKLVYAISQQKNSKRPAARHIDNGNGKPLCGGNGREPFFWAPEEGEPTCRICMDLALMLTEEPEKADPTQINGD
Ga0209172_100378272	3300025310	Hot Spring Sediment	MKLVYAFPQGANSKRPTARHIDNGKGRPLCGGNGRESFFWAPEEGEPTCKICQDLALMMAGDDDT
Ga0207709_118628251	3300025935	Miscanthus Rhizosphere	MKLVYAVTQRMDPKRPAARHLDSGEGKPMCGGNGREPLLWAPEEGEPTCKICIDLAMMIQGETDELGKNN
Ga0207712_100738833	3300025961	Switchgrass Rhizosphere	MKLVYAVSQRTDPKRPAARHLDNGEGKPMCGGNGREPLLWATEEGEPTCKICMDLALMTQGEIDELGKNN
Ga0207712_114487481	3300025961	Switchgrass Rhizosphere	MHEKRLMKLVYAVSQQMDPKRPAARHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICMHLAMMRQGETDELGKNN
Ga0208781_10110892	3300026049	Natural And Restored Wetlands	MKLVYAVSQGTKPKSPTARHIDNGQGQPLYGGNGREPFLRASEEGEPACKICMDLTLMLASEPGRTHTRQTGGE
Ga0207674_104158061	3300026116	Corn Rhizosphere	PAARHLDSGEGKPMCGGNGREPLLWAPEEGEPTCKICMHLAMMIQGETDELGKNN
Ga0209981_10544101	3300027378	Arabidopsis Thaliana Rhizosphere	MKLVYAVSQWTNATLPTARHLDNGEGKPLCGGNGRQPLLWATAEGQPTCKICMDLAIMTQGETDELSANN
Ga0209818_10099014	3300027637	Agricultural Soil	MKLVYTVSQRMHPKHPAARHLDNGDGKPMCGGNGRQPLLRAPEEGEPTCKICMDLAIMGNGAENNKSVM
Ga0209387_10050262	3300027639	Agricultural Soil	MKLVYAVSQRTDPKHPAARHLDNGEGKPMCGGNGRQPLLWASEEGEPTCKICMDLAIMGNGAENNKSVM
Ga0209387_10657941	3300027639	Agricultural Soil	MKLVYAVSQWTNPKRPPARHLDNGEGKPMCGGNGRQPLLWATEEGEPTCKICMDLAMMIESETKELGANS
Ga0209485_10245091	3300027691	Agricultural Soil	DPKHPAARHLDNGEGKPMCGGNGRQPLLRASEEGEPTCKICMDLAIMGNGAENNKSVM
Ga0209262_103479761	3300027841	Freshwater	MKLVYAVSEKTDPKRPAARHLDDGNGRPMCGGNGREPLVWAPEEGEPTCKICVDLAMMGPGETGQTEES
Ga0209814_100141194	3300027873	Populus Rhizosphere	MKLVYAVSQRANPKRPTARHVDNGNGKPLCGGNGREPFFWAPEEGEPTCKICMDLAMMVQDKPEEAGPRQTTGD
Ga0209481_100378133	3300027880	Populus Rhizosphere	MKLVYAVSQLTEAKRPNARHIDNGEGKPLCGGNGREPFFWAPAQGEPTCKICMDLALMIDSEPEKVNAKPTGGG
Ga0209481_100790772	3300027880	Populus Rhizosphere	MKLVYAVSQRANPKRPTAWHVDNGNGKPLCGGNGREPFFWAPEEGEPTCKICMDLAMMVQDKPEEAGPRQTTGD
Ga0209481_102539342	3300027880	Populus Rhizosphere	MQLVYAVSQQTKSKRPTARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICMDLALMLEQQSKDTSSLQTGRD
Ga0209486_100076382	3300027886	Agricultural Soil	MRLVYAVSERPDLKRPAARHLDNGEGKPMCGGNGREPLLWASEEGEPTCKICIDLAMMTQGEMDELGKNN
Ga0209486_100305073	3300027886	Agricultural Soil	MKLVYTVSQRMHPKHPAARHLDNGEGKPMCGGNGREPLLWASEEGEPTCKICMDLAIMGNGAENNKSVM
Ga0209486_105694382	3300027886	Agricultural Soil	MKLVYAVSQRTKARRPTARHIDNGEGRPLCGGNGREPFFWAPEEGEPTCKICMDLALMLQDESEKSSTKQVS
Ga0268265_101094812	3300028380	Switchgrass Rhizosphere	MKLVYAVSQRTDLKRPTARHLDNGEGKPMCGGNGREPLWWASEEGEPTCRICMDLAVMTQGEIDELGKNN
Ga0268265_101840332	3300028380	Switchgrass Rhizosphere	MKLVYAVTQQMDPRRPAARHLDNGEGKPMCGGNGREPLLWAPEEGEPTCKICIDLAMMTQGETDELGKNN
Ga0310887_108847301	3300031547	Soil	QTNSKRPTARHIDNGQGKPLCGGNGREPFFWAPEEGEPTCKICMDLALMLEERSKDTSSTQTGGDSGCVERRQEFCFT
Ga0307408_1022290561	3300031548	Rhizosphere	MKLVYAVSQRTDPKHPAARHFDNGERKPMCGGNGREPLLWASEEGEPTCKICMDLAMMTQSEMDQAGKNN
Ga0307413_103109361	3300031824	Rhizosphere	MKLVYAIGKRTNSKRPAARHIDNGKGKPLCGGNGREPFFWAPEEGEPTCKICTDLALMLGNEFPKAAPAK
Ga0307407_103255752	3300031903	Rhizosphere	MKLVYAVSQRMHPKHPAARHLDNGEGKPMCGGNGRQPLLWATEECEPTCKICIDLALMTQSAMNELGENN
Ga0307412_104313932	3300031911	Rhizosphere	MKLVYAVSPRTDPKHPAARHLDNGEGKPMCGGNGRQPLLWATEECEPTCKICIDLALMTQSAMNELGENN
Ga0307409_1013581902	3300031995	Rhizosphere	MKLVYAVSQRMHPKHPAARHLDNGEGKPMCGGNGRQPLLWATEEGEPTCKICIDLALMTQSAMNELGENN
Ga0307416_1009817582	3300032002	Rhizosphere	MKLVYAVSQRTDPKHPAARHLDNGEGKPMCGGNGRQPLLWATEEGEPTCKICIDLALMTQSAMNELGENN
Ga0307416_1016760411	3300032002	Rhizosphere	MKLVYAVSQRTDPKHPSARHLDNGKGKPMCGGNGREPLLWAPEEGEPTCKICIDLALMTQGEMNELGENN
Ga0307415_1008009492	3300032126	Rhizosphere	MKLVYAVSQRTDPKHPAARHLDNGKGKPMCGGNGREPLLWAPEEGEPTCKICIDLALMTQGEMNELGENN
Ga0307415_1017228731	3300032126	Rhizosphere	MKLVYAIGKRTNSKRPAARHIDNGEGKPLCGGNGREPFFWAPEEGEPTCKICTDLALMLGNELAKATPAK
Ga0315910_103255102	3300032144	Soil	MKLVYAVSEKTDPKRPAARHLDDGNGRPMCGGNGREPFVWAPEEGEPTCKICMDLAMMGAGEPSQPETDL
Ga0315910_110306081	3300032144	Soil	STKGARMKLVYAVSERMNPKRPATRHLDDGNGRPLCGGNGREAFFWAPEEGDPTCKICMDLAVMGHGENEQVEKRS
Ga0315912_100262223	3300032157	Soil	MKLVYAVSERMNPKRPATRHLDDGNGRPLCGGNGREAFFWAPEEGDPTCKICMDLAVMGHGENEQVEKRS
Ga0315912_100537284	3300032157	Soil	MKLVYAVSERMNPKRPAARHIDDGNGRPLCGGNGREPFFWAPEEGEPTCKICMDLAIMGHGENEQTKKNG
Ga0370490_0040706_1120_1332	3300034128	Untreated Peat Soil	MKLVYAVSEKADPKRPAARHLDDGNGRPMCGGNGREPLVWAPEEGEPTCKICVDLAMMGHGEPQPPESDP
Ga0370506_017393_1287_1469	3300034157	Untreated Peat Soil	TDPKRPAARHLDDGNGRPMCGGNGREPWIWAPEDGEPTCKICMDLAIMGLGETGQADEES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078557

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences