Basic Information | |
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Family ID | F078516 |
Family Type | Metagenome |
Number of Sequences | 116 |
Average Sequence Length | 59 residues |
Representative Sequence | VLDAAAHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL |
Number of Associated Samples | 107 |
Number of Associated Scaffolds | 116 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 0.88 % |
% of genes near scaffold ends (potentially truncated) | 96.55 % |
% of genes from short scaffolds (< 2000 bps) | 92.24 % |
Associated GOLD sequencing projects | 100 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.43 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (94.828 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.207 % of family members) |
Environment Ontology (ENVO) | Unclassified (49.138 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (47.414 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 34.57% β-sheet: 0.00% Coil/Unstructured: 65.43% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.43 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 116 Family Scaffolds |
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PF11899 | DUF3419 | 22.41 |
PF00196 | GerE | 4.31 |
PF02915 | Rubrerythrin | 4.31 |
PF00027 | cNMP_binding | 2.59 |
PF00550 | PP-binding | 0.86 |
PF08021 | FAD_binding_9 | 0.86 |
PF07992 | Pyr_redox_2 | 0.86 |
PF08281 | Sigma70_r4_2 | 0.86 |
PF03176 | MMPL | 0.86 |
PF04140 | ICMT | 0.86 |
COG ID | Name | Functional Category | % Frequency in 116 Family Scaffolds |
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COG0543 | NAD(P)H-flavin reductase | Energy production and conversion [C] | 1.72 |
COG1018 | Flavodoxin/ferredoxin--NADP reductase | Energy production and conversion [C] | 0.86 |
COG1033 | Predicted exporter protein, RND superfamily | General function prediction only [R] | 0.86 |
COG2375 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains | Inorganic ion transport and metabolism [P] | 0.86 |
COG2409 | Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily | General function prediction only [R] | 0.86 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 94.83 % |
Unclassified | root | N/A | 5.17 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000363|ICChiseqgaiiFebDRAFT_14155947 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 790 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_105529432 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1005 | Open in IMG/M |
3300004114|Ga0062593_101740596 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 682 | Open in IMG/M |
3300005329|Ga0070683_100332354 | All Organisms → cellular organisms → Bacteria | 1447 | Open in IMG/M |
3300005330|Ga0070690_101790134 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 500 | Open in IMG/M |
3300005337|Ga0070682_100328593 | All Organisms → cellular organisms → Bacteria | 1132 | Open in IMG/M |
3300005338|Ga0068868_101729575 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 590 | Open in IMG/M |
3300005340|Ga0070689_100536281 | All Organisms → cellular organisms → Bacteria | 1007 | Open in IMG/M |
3300005343|Ga0070687_100007037 | All Organisms → cellular organisms → Bacteria | 4654 | Open in IMG/M |
3300005344|Ga0070661_101232822 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 626 | Open in IMG/M |
3300005353|Ga0070669_100261890 | All Organisms → cellular organisms → Bacteria | 1380 | Open in IMG/M |
3300005354|Ga0070675_102009046 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 533 | Open in IMG/M |
3300005455|Ga0070663_100744356 | All Organisms → cellular organisms → Bacteria | 836 | Open in IMG/M |
3300005456|Ga0070678_101299125 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 677 | Open in IMG/M |
3300005468|Ga0070707_101129693 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 749 | Open in IMG/M |
3300005539|Ga0068853_100573673 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 1070 | Open in IMG/M |
3300005543|Ga0070672_100427853 | All Organisms → cellular organisms → Bacteria | 1138 | Open in IMG/M |
3300005578|Ga0068854_100073711 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 2503 | Open in IMG/M |
3300005614|Ga0068856_101754719 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 633 | Open in IMG/M |
3300005764|Ga0066903_103414725 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium | 857 | Open in IMG/M |
3300005834|Ga0068851_10381238 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 826 | Open in IMG/M |
3300005843|Ga0068860_102338054 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 555 | Open in IMG/M |
3300006791|Ga0066653_10337450 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 761 | Open in IMG/M |
3300006894|Ga0079215_10216824 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 984 | Open in IMG/M |
3300009093|Ga0105240_11904525 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 619 | Open in IMG/M |
3300009095|Ga0079224_100206049 | All Organisms → cellular organisms → Bacteria | 2835 | Open in IMG/M |
3300009098|Ga0105245_10737762 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1020 | Open in IMG/M |
3300009137|Ga0066709_100719953 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1437 | Open in IMG/M |
3300010038|Ga0126315_11024339 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 554 | Open in IMG/M |
3300010039|Ga0126309_10175379 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1170 | Open in IMG/M |
3300010045|Ga0126311_11357965 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 592 | Open in IMG/M |
3300010166|Ga0126306_11406590 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 577 | Open in IMG/M |
3300010366|Ga0126379_13646206 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium | 516 | Open in IMG/M |
3300011398|Ga0137348_1078573 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 569 | Open in IMG/M |
3300011434|Ga0137464_1008405 | All Organisms → cellular organisms → Bacteria | 2662 | Open in IMG/M |
3300011441|Ga0137452_1189353 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 697 | Open in IMG/M |
3300012140|Ga0137351_1046419 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 614 | Open in IMG/M |
3300012201|Ga0137365_10770592 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 703 | Open in IMG/M |
3300012206|Ga0137380_11433516 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 575 | Open in IMG/M |
3300012209|Ga0137379_10793253 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 852 | Open in IMG/M |
3300012354|Ga0137366_10916399 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 616 | Open in IMG/M |
3300012360|Ga0137375_10034176 | All Organisms → cellular organisms → Bacteria | 5732 | Open in IMG/M |
3300012360|Ga0137375_10807613 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 754 | Open in IMG/M |
3300012532|Ga0137373_11122390 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 561 | Open in IMG/M |
3300012957|Ga0164303_11483605 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 511 | Open in IMG/M |
3300012958|Ga0164299_11044413 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 606 | Open in IMG/M |
3300014865|Ga0180078_1094845 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 522 | Open in IMG/M |
3300015194|Ga0167666_1069815 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 809 | Open in IMG/M |
3300015374|Ga0132255_101295330 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1099 | Open in IMG/M |
3300017974|Ga0187777_10320242 | All Organisms → cellular organisms → Bacteria | 1062 | Open in IMG/M |
3300018422|Ga0190265_11930208 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 697 | Open in IMG/M |
3300018429|Ga0190272_10019964 | All Organisms → cellular organisms → Bacteria | 3466 | Open in IMG/M |
3300018432|Ga0190275_12428217 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 602 | Open in IMG/M |
3300018466|Ga0190268_11554153 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 579 | Open in IMG/M |
3300018920|Ga0190273_10899478 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 717 | Open in IMG/M |
3300018920|Ga0190273_11739275 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 565 | Open in IMG/M |
3300021339|Ga0193706_1174628 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 584 | Open in IMG/M |
3300021560|Ga0126371_12065498 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium | 686 | Open in IMG/M |
3300022694|Ga0222623_10117845 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1034 | Open in IMG/M |
3300022694|Ga0222623_10190550 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 796 | Open in IMG/M |
3300023263|Ga0247800_1138747 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 518 | Open in IMG/M |
3300025324|Ga0209640_10933365 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 673 | Open in IMG/M |
3300025326|Ga0209342_10799501 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 742 | Open in IMG/M |
3300025909|Ga0207705_10618059 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 843 | Open in IMG/M |
3300025913|Ga0207695_10809886 | All Organisms → cellular organisms → Bacteria | 817 | Open in IMG/M |
3300025925|Ga0207650_10443665 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1079 | Open in IMG/M |
3300025926|Ga0207659_11724821 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 533 | Open in IMG/M |
3300025931|Ga0207644_10570054 | All Organisms → cellular organisms → Bacteria | 938 | Open in IMG/M |
3300025932|Ga0207690_11587943 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 547 | Open in IMG/M |
3300025940|Ga0207691_11152221 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 644 | Open in IMG/M |
3300025945|Ga0207679_11677758 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 582 | Open in IMG/M |
3300025945|Ga0207679_11684734 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 580 | Open in IMG/M |
3300025960|Ga0207651_10944724 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 769 | Open in IMG/M |
3300025981|Ga0207640_10072110 | All Organisms → cellular organisms → Bacteria | 2328 | Open in IMG/M |
3300025981|Ga0207640_10236233 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 1409 | Open in IMG/M |
3300025986|Ga0207658_10469793 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1116 | Open in IMG/M |
3300025986|Ga0207658_11291369 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 667 | Open in IMG/M |
3300025986|Ga0207658_12002682 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 527 | Open in IMG/M |
3300026067|Ga0207678_11061805 | All Organisms → cellular organisms → Bacteria | 717 | Open in IMG/M |
3300026078|Ga0207702_11622773 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 640 | Open in IMG/M |
3300026089|Ga0207648_12149500 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 519 | Open in IMG/M |
3300026118|Ga0207675_102481566 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 530 | Open in IMG/M |
3300026327|Ga0209266_1084132 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1437 | Open in IMG/M |
3300027907|Ga0207428_10459340 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 928 | Open in IMG/M |
3300028381|Ga0268264_12297712 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 546 | Open in IMG/M |
3300028713|Ga0307303_10179277 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 519 | Open in IMG/M |
3300028778|Ga0307288_10456179 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 525 | Open in IMG/M |
3300028812|Ga0247825_10187701 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1427 | Open in IMG/M |
3300028819|Ga0307296_10078152 | All Organisms → cellular organisms → Bacteria | 1763 | Open in IMG/M |
3300031229|Ga0299913_10319786 | All Organisms → cellular organisms → Bacteria | 1539 | Open in IMG/M |
3300031561|Ga0318528_10347019 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium | 797 | Open in IMG/M |
3300031562|Ga0310886_10935478 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 553 | Open in IMG/M |
3300031679|Ga0318561_10173865 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium | 1163 | Open in IMG/M |
3300031680|Ga0318574_10311711 | Not Available | 915 | Open in IMG/M |
3300031681|Ga0318572_10261914 | Not Available | 1018 | Open in IMG/M |
3300031747|Ga0318502_10696020 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium | 614 | Open in IMG/M |
3300031779|Ga0318566_10236723 | Not Available | 906 | Open in IMG/M |
3300031805|Ga0318497_10583451 | All Organisms → cellular organisms → Bacteria | 627 | Open in IMG/M |
3300031821|Ga0318567_10537206 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium | 664 | Open in IMG/M |
3300031852|Ga0307410_10874647 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 768 | Open in IMG/M |
3300031852|Ga0307410_11209634 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 658 | Open in IMG/M |
3300031893|Ga0318536_10472544 | All Organisms → cellular organisms → Bacteria | 631 | Open in IMG/M |
3300031896|Ga0318551_10436924 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium | 747 | Open in IMG/M |
3300031901|Ga0307406_11376199 | All Organisms → cellular organisms → Bacteria | 618 | Open in IMG/M |
3300031903|Ga0307407_10680088 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 773 | Open in IMG/M |
3300031910|Ga0306923_10401989 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1559 | Open in IMG/M |
3300031911|Ga0307412_11097365 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 708 | Open in IMG/M |
3300031949|Ga0214473_11395780 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 713 | Open in IMG/M |
3300032065|Ga0318513_10181173 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium | 1012 | Open in IMG/M |
3300032089|Ga0318525_10269243 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium | 875 | Open in IMG/M |
3300032090|Ga0318518_10173915 | Not Available | 1098 | Open in IMG/M |
3300032211|Ga0310896_10418219 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 720 | Open in IMG/M |
3300033407|Ga0214472_11105499 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 695 | Open in IMG/M |
3300033407|Ga0214472_11491808 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 578 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 11.21% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 10.34% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 6.03% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 6.03% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 6.03% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 6.03% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 5.17% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 4.31% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 3.45% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.45% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 3.45% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.45% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.59% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.59% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.59% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.72% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.72% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.72% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.72% |
Soil | Environmental → Terrestrial → Soil → Loam → Unclassified → Soil | 1.72% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.72% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.72% |
Glacier Forefield Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil | 0.86% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil | 0.86% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.86% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.86% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.86% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.86% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.86% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.86% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.86% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.86% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.86% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.86% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.86% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000363 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Host-Associated | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300006791 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 | Environmental | Open in IMG/M |
3300006894 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control | Environmental | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009095 | Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015 | Environmental | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
3300010039 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56 | Environmental | Open in IMG/M |
3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
3300010166 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300011398 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2 | Environmental | Open in IMG/M |
3300011434 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2 | Environmental | Open in IMG/M |
3300011441 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2 | Environmental | Open in IMG/M |
3300012140 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT690_2 | Environmental | Open in IMG/M |
3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
3300012354 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG | Environmental | Open in IMG/M |
3300012360 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG | Environmental | Open in IMG/M |
3300012532 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG | Environmental | Open in IMG/M |
3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300014865 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D | Environmental | Open in IMG/M |
3300015194 | Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1c, glacier snout) | Environmental | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017974 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG | Environmental | Open in IMG/M |
3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
3300018432 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T | Environmental | Open in IMG/M |
3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
3300018920 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS | Environmental | Open in IMG/M |
3300021339 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1 | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300022694 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex | Environmental | Open in IMG/M |
3300023263 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6 | Environmental | Open in IMG/M |
3300025324 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes) | Environmental | Open in IMG/M |
3300025326 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes) | Environmental | Open in IMG/M |
3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026327 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes) | Environmental | Open in IMG/M |
3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028713 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184 | Environmental | Open in IMG/M |
3300028778 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142 | Environmental | Open in IMG/M |
3300028812 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48 | Environmental | Open in IMG/M |
3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
3300031229 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 | Environmental | Open in IMG/M |
3300031561 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26 | Environmental | Open in IMG/M |
3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
3300031680 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22 | Environmental | Open in IMG/M |
3300031681 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20 | Environmental | Open in IMG/M |
3300031747 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22 | Environmental | Open in IMG/M |
3300031779 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22 | Environmental | Open in IMG/M |
3300031805 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23 | Environmental | Open in IMG/M |
3300031821 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20 | Environmental | Open in IMG/M |
3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Host-Associated | Open in IMG/M |
3300031893 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28 | Environmental | Open in IMG/M |
3300031896 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19 | Environmental | Open in IMG/M |
3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Host-Associated | Open in IMG/M |
3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Host-Associated | Open in IMG/M |
3300031949 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197 | Environmental | Open in IMG/M |
3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
3300032065 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20 | Environmental | Open in IMG/M |
3300032089 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23 | Environmental | Open in IMG/M |
3300032090 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22 | Environmental | Open in IMG/M |
3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
3300033407 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
ICChiseqgaiiFebDRAFT_141559472 | 3300000363 | Soil | ARIARDPAIVPAVLDAAAHFHHFGEQAVDDVPVALPGDPLAIRSFARRIERLCGVRLVDHLKQRL* |
INPhiseqgaiiFebDRAFT_1055294321 | 3300000364 | Soil | ARDPTIVPAVLEAAAHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL* |
Ga0062593_1017405961 | 3300004114 | Soil | PAVLEAAAHFHHFGEQAIDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL* |
Ga0070683_1003323543 | 3300005329 | Corn Rhizosphere | FRHFGEEVVGSVPVAMAGDPLAIRTFARRIERLCGVRLVDHLKRSL* |
Ga0070690_1017901342 | 3300005330 | Switchgrass Rhizosphere | ARIARDPTIVPAVLDAAAHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL* |
Ga0070682_1003285933 | 3300005337 | Corn Rhizosphere | LIAKRIAADPTVIRQVLDAALDFHHFGEEAIGRVPVAQPGDAIAIQTFAKRIERLCGVRLVDHIKQTNLHRRAS* |
Ga0068868_1017295752 | 3300005338 | Miscanthus Rhizosphere | FHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL* |
Ga0070689_1005362811 | 3300005340 | Switchgrass Rhizosphere | IPRVLDAALDFHHFGEQAIGTVPVAQPGDPIAIQTFARRIERLCGKRLVDHIKNGMKG* |
Ga0070687_1000070371 | 3300005343 | Switchgrass Rhizosphere | DPGIVPTVLDAAAHFHHFGEQVVPDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL |
Ga0070661_1012328221 | 3300005344 | Corn Rhizosphere | LLAAHIARDRTIVPIVLDAAVHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLIDHLKQRL* |
Ga0070669_1002618901 | 3300005353 | Switchgrass Rhizosphere | IVPIVLDAAVHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLIDHLKQRL* |
Ga0070675_1020090461 | 3300005354 | Miscanthus Rhizosphere | DAALDFHHFGEQAIGTVPVAQPGDPIAIQTFARRIERLCGKRLVDHIKNGMKG* |
Ga0070663_1007443562 | 3300005455 | Corn Rhizosphere | DAAVHFRHFGEEVVGSVPVAMAGDPLAIRTFARRIERLCGVRLADHLKRSL* |
Ga0070678_1012991252 | 3300005456 | Miscanthus Rhizosphere | AASDLLAAHIARDRTIVPIVLDAAVHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLIDHLKQRL* |
Ga0070707_1011296932 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | ADPSVIPQVLDAALDFHHFGEQAIGTVPVAQPGDPIAIQTFAKRIERLCGIRLVDHIKNKNLNRRAI* |
Ga0068853_1005736731 | 3300005539 | Corn Rhizosphere | VLDAAVHFRHFGEEVVSSVPIAMAGDPLAIRTFARRIERLCGVRLVDHLKATL* |
Ga0070672_1004278531 | 3300005543 | Miscanthus Rhizosphere | HFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLIDHLKQRL* |
Ga0068854_1000737111 | 3300005578 | Corn Rhizosphere | VLDAAAHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL* |
Ga0068856_1017547191 | 3300005614 | Corn Rhizosphere | HFHHFGEQAVDDVPVALPGDPLAIRSFARRIERLCGVRLVDHLKQRL* |
Ga0066903_1034147251 | 3300005764 | Tropical Forest Soil | VVLAAASGFRHFGEEAVGEVPVAESGDAQAIRSFARRIERLCGVRLVDHLRATLPA* |
Ga0068851_103812381 | 3300005834 | Corn Rhizosphere | VLDAAVHFHHFGEQVVPDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL* |
Ga0068860_1023380541 | 3300005843 | Switchgrass Rhizosphere | LIAKRIASNPELIPRVLDAALDFHHFGEQAIGTVPVAQPGDPIAIQTFARRIERLCGKRLVDHIKNGMKG* |
Ga0066653_103374501 | 3300006791 | Soil | TRIAADPSVVPTVLDAAVHFHHFGEQAVPDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL* |
Ga0079215_102168242 | 3300006894 | Agricultural Soil | RVLDAAVDFRHFGEEALGGAVPVAMHGDPRAIQTFARRIERLCGTRLVDHLKATL* |
Ga0105240_119045252 | 3300009093 | Corn Rhizosphere | LDAALDFHHFGEQAIGTVPVAQPGDPIAIQTFARRIERLCGKRLVDHIKNGMKG* |
Ga0079224_1002060491 | 3300009095 | Agricultural Soil | RVLDAAAHFRHYGERAVGTVPVAQAGDPIAISTFARRIERLCGVRLVDHLKASL* |
Ga0105245_107377623 | 3300009098 | Miscanthus Rhizosphere | HFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL* |
Ga0066709_1007199531 | 3300009137 | Grasslands Soil | HFHHFGERVVSDVPVALAGDPVALRSFARRIERLCGVRLVDYLKENL* |
Ga0126315_110243391 | 3300010038 | Serpentine Soil | HFGERAVSTVPVAMPGDPLAIRSFARRIERLCGVRLVDHLKGGL* |
Ga0126309_101753793 | 3300010039 | Serpentine Soil | DLIAKRIAADPSVVPQVLDAALDFHHFGEQAIGAVPIAQPGDPIAIQTFAKRIERLCGIRLVDHIKNTNLNRRAS* |
Ga0126311_113579651 | 3300010045 | Serpentine Soil | LLAKRIAREPALVPEVLAAAAAFHHFGERAVAGVPVAFPGDPLAIRSFAKRVERLCGVRLVDYLKQGL* |
Ga0126306_114065902 | 3300010166 | Serpentine Soil | LDAAVHFHHFGEQAVSDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL* |
Ga0126379_136462062 | 3300010366 | Tropical Forest Soil | SSFRHLGEEAVGEVPVAESGDAQAIRSFARRIERLCGVRLVDHLRATLPG* |
Ga0137348_10785731 | 3300011398 | Soil | AAIIPRVLDAAAHFKHFGERAVGEVPVAIPGDPLAIRTFARRIERLCGVRLVDYLKEAI* |
Ga0137464_10084054 | 3300011434 | Soil | RVLHAAAHFRHSGERAVGDVPVAMPGDAVALRSFAKRIERLCGVRLVDYMKEAL* |
Ga0137452_11893532 | 3300011441 | Soil | IAKRVAIDPTIVPRVLHAAAHFRHFGERAVGDVPVAMPGDAVALRSFAKRIERLCGVRLVDYMKEAL* |
Ga0137351_10464192 | 3300012140 | Soil | LHAAAHFRHFGERAVGDVPVAMPGDAVALRSFAKRIERLCGVRLVDYMKEAL* |
Ga0137365_107705921 | 3300012201 | Vadose Zone Soil | LLAKRIAADPAVVSQVLEAAAHFQHFGEEAIGAVPVAFPGDPVAIRTFAKRIERLCGVRLVDHLKASL* |
Ga0137380_114335161 | 3300012206 | Vadose Zone Soil | VLTAATHFKHFGERAIGDVPVALPGDPLAIRTFARRIERLCGTRLIDHLKEAI* |
Ga0137379_107932533 | 3300012209 | Vadose Zone Soil | AADPSVIPQVLDAALDFHHFGEQAIGTVPVAQPGDPIAIQTFAKRVERLCDIRLVDHIKNKNLNRRAL* |
Ga0137366_109163992 | 3300012354 | Vadose Zone Soil | AADPAVVSQVLEAAAHFQHFGEEAIGAVPVAFPGDPVAIRTFAKRIERLCGVRLVDHLKASL* |
Ga0137375_100341762 | 3300012360 | Vadose Zone Soil | MRDGIGADASLVPQVLDAAAHFQHFGEEAAGVVPVAFPGDPVAIRTFAKRVERLCGVRLVDHLKATL* |
Ga0137375_108076132 | 3300012360 | Vadose Zone Soil | GLIPSVLDAAVDFHHFGEQAIGAVPVAQPGDPIAIQTFARRIERLCGTRLVDHIKKTINTD* |
Ga0137373_111223902 | 3300012532 | Vadose Zone Soil | AAHFQHFGEEAIGAVPVAFPGDPVAIRTFAKRVERLCGVRLVDHLKASL* |
Ga0164303_114836051 | 3300012957 | Soil | AVHFHHFGEQVVPQVPVALPGDPLAIRSFSRRIERLCGVRLVDHLKRQL* |
Ga0164299_110444131 | 3300012958 | Soil | KRIDADRSVIPRVLEAAQHFRHFGEQAVGTVPVAQPGDPIAIQTFARRIERLCGVRLVDHIKIGL* |
Ga0180078_10948452 | 3300014865 | Soil | AQSASDLIAKRIEADAGVIPRVLDAAAHFKHFGERAVGEVPVAIPGDPLAIRTFARRIERLCGVRLVDHLKEAI* |
Ga0167666_10698151 | 3300015194 | Glacier Forefield Soil | ADRSVIPRVLEAARHFHHFGEQAIGKVPVAQPGDPIAIQTFARRIERLCGVRLVDYIKSGL* |
Ga0132255_1012953301 | 3300015374 | Arabidopsis Rhizosphere | LMPTVLDAAAHFHHFGEQVVPDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL* |
Ga0187777_103202422 | 3300017974 | Tropical Peatland | SFRHFGEEAVGEVPVAEAGDAQAIRSFARRIERLCGVRLVDHLRTTLPG |
Ga0190265_119302081 | 3300018422 | Soil | LDPEAVPAVLEAASSFHHFGEEAIGAVPVAQPGDAVAIRTFISRIERLCGIRLVDHIKAS |
Ga0190272_100199641 | 3300018429 | Soil | IAADPSVIPSVLDAALDFHHFGEQAIGTVPVAQPGDAIAIQTFAKRIERLCGIRLVDHIKTKSTLNRRAS |
Ga0190275_124282172 | 3300018432 | Soil | LIAKRIATDSAVIPRVLDAAYGFHHFGEEVVGAVPVAQPGDPIAIRTFVGRIERLCNIRLVDHIKASL |
Ga0190268_115541532 | 3300018466 | Soil | TVLDAAVHFHHFGEQAVADVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL |
Ga0190273_108994782 | 3300018920 | Soil | VLDAALHFHHFGEQAIGTVPVAQPGDAVAIQTFARRIERLCGMRLVDHIKRSL |
Ga0190273_117392751 | 3300018920 | Soil | GGRDAAVQFHHCGEQAIGEVPVALPGDPLAIRSFARRIERLCGVRLVDHLKQGL |
Ga0193706_11746282 | 3300021339 | Soil | AAHFHHFGERVVGDVPVAMPGDPIALQSFARRIERLCGVRLVDYMKEAL |
Ga0126371_120654981 | 3300021560 | Tropical Forest Soil | FRHFGEEAVEEVPVAESGDAQAIRSFARRIERLCGVRLVDHLRDTLPA |
Ga0222623_101178453 | 3300022694 | Groundwater Sediment | IAANPSVIPQVLDAALDFHHFGEQAIGVVPVAQPGDPIAIQTFAKRIERLCGIRLVDHIKNTNLNRRAS |
Ga0222623_101905501 | 3300022694 | Groundwater Sediment | DPGLIPRVLEAATHFKHFGERVVGDVPVALPGDPLAIRTFARRIERLCGVRLVDHLKEAI |
Ga0247800_11387471 | 3300023263 | Soil | LLAARIASDPGIVPTVLDAAVHFHHFGEQAVADVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL |
Ga0209640_109333652 | 3300025324 | Soil | VPQLAWFAEPGIVPAVLEAAVHFHHFGEEAVGAVPVAEPGDPIAIRTFAKRIERLCGARLVDHLKRAL |
Ga0209342_107995011 | 3300025326 | Soil | IAKRIAADPDVVPQVLDAAAHFQHFGAEAVGAVPVALPGDPLAIRTFAKRIERLCGVRLVDHLKAGLEAR |
Ga0207705_106180591 | 3300025909 | Corn Rhizosphere | LIAKRIAADPSLVASVLDAAVHFRHFGEEVVSSVPVAMAGDPLAIRTFARRIERLCGVRLVDHLKGTL |
Ga0207695_108098862 | 3300025913 | Corn Rhizosphere | LIAKRIAADPTLVPVVLDAAVHFRHFGEEVVGSVPVAMAGDPLAIRTFARRIERLCGVRLVDHLKRSL |
Ga0207650_104436651 | 3300025925 | Switchgrass Rhizosphere | AHFHHFGEQVVPDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL |
Ga0207659_117248211 | 3300025926 | Miscanthus Rhizosphere | DAALDFHHFGEQAIGTVPVAQPGDPIAIQTFARRIERLCGKRLVDHIKNGMKG |
Ga0207644_105700543 | 3300025931 | Switchgrass Rhizosphere | DPGIVSTALDAAAHFHHFGEQVVPDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL |
Ga0207690_115879431 | 3300025932 | Corn Rhizosphere | IASDPGIVPTVLDAAVHFHHFGEQAVSDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL |
Ga0207691_111522211 | 3300025940 | Miscanthus Rhizosphere | HFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLIDHLKQRL |
Ga0207679_116777582 | 3300025945 | Corn Rhizosphere | RDPTIVPAVLDAAAHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQR |
Ga0207679_116847341 | 3300025945 | Corn Rhizosphere | IVLDAAVHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLIDHLKQRL |
Ga0207651_109447242 | 3300025960 | Switchgrass Rhizosphere | RDRTIVPIVLDAAVHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLIDHLKQR |
Ga0207640_100721104 | 3300025981 | Corn Rhizosphere | ARDPTIVPAVLDAAAHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL |
Ga0207640_102362331 | 3300025981 | Corn Rhizosphere | VLDAAVHFRHFGEEVVSSVPIAMAGDPLAIRTFARRIERLCGVRLVDHLKATL |
Ga0207658_104697933 | 3300025986 | Switchgrass Rhizosphere | LIAKRIASNPELIPRVLDAALDFHHFGEQAIGTVPVAQPGDPIAIQTFARRIERLCGKRLVDHIKNGMKG |
Ga0207658_112913691 | 3300025986 | Switchgrass Rhizosphere | RIASHPGIVPTVLDAAAHFHHFGEQVVPDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL |
Ga0207658_120026822 | 3300025986 | Switchgrass Rhizosphere | PSIVPAVLDAAAHFHHFGEQAVGDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL |
Ga0207678_110618051 | 3300026067 | Corn Rhizosphere | IAKRIAADPTLVPVVLDAAVHFRHFGEEVVGSVPVAMAGDPLAIRTFARRIERLCGVRLADHLKRSL |
Ga0207702_116227732 | 3300026078 | Corn Rhizosphere | HFHHFGEQAVDDVPVALPGDPLAIRSFARRIERLCGVRLVDHLKQRL |
Ga0207648_121495001 | 3300026089 | Miscanthus Rhizosphere | ARIASDPSIVPTVLDAAVHFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL |
Ga0207675_1024815662 | 3300026118 | Switchgrass Rhizosphere | HFHHFGEQAVDDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL |
Ga0209266_10841323 | 3300026327 | Soil | VPQVLDAAAHFQHFGEEAVGVVPVAFPGDPVAIRTFAKRVERLCGVRLVDHLKATL |
Ga0207428_104593403 | 3300027907 | Populus Rhizosphere | DAAAHFHHFGEQVVPDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL |
Ga0268264_122977121 | 3300028381 | Switchgrass Rhizosphere | LLAARIGRDPSIVPAVLDAAAHFHHFGEQAVGDVPVALPGDPLAIRSFARRVERLCGVRLVDHLKQRL |
Ga0307303_101792771 | 3300028713 | Soil | QARIASDPRVVPAVLDAAVHFHHFGEQAVNEVPVALPGDPLAIRSFARRIERLCGVRLVDHLKRQL |
Ga0307288_104561792 | 3300028778 | Soil | PGIVPTVLDAAVHFHHFGEQVVPDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL |
Ga0247825_101877013 | 3300028812 | Soil | DLLAARIARDPGIVPTVLDAAVHFHHFGEQAVADVPVALPGDPLAIRSFTRRIERLCDVRLVDHLKRQL |
Ga0307296_100781523 | 3300028819 | Soil | AKRIAANPSVIPQVLDAALDFHHFGEQAIGAVPVAQPGDPIAIQTFAKRIERLCGIRLVDHIKNTNLNRRAS |
Ga0299913_103197863 | 3300031229 | Soil | IAKRISADPALVPHVLDAAVHFRHYGESAVGAVPVAQPGDPLAIRTFARRIERLCGIRLVDHLKASL |
Ga0318528_103470192 | 3300031561 | Soil | RRFHHFGDEAVADVPVAESGDGLAIRSFARRIERLCGVRFVDHLRASLPR |
Ga0310886_109354781 | 3300031562 | Soil | TVLDAAVHFHHFGEQAVADVPVALPGDPLAIRSFSRRIERLCGVRLVDHIKRQL |
Ga0318561_101738651 | 3300031679 | Soil | TLVPVVLAAASEFRHFGEEAVGEVPVAESGDAQAIRSFARRIERLCGVRLVDHLRATLPG |
Ga0318574_103117111 | 3300031680 | Soil | AASSFRHFGEEAVGEVPVAESGDPQAIRSFARRIERLCGVRLVDHLRATLPG |
Ga0318572_102619142 | 3300031681 | Soil | RRLVPVVLEAARQFHHFGEEAVADVPVAESGDGLAIRSFARRIERLCGVRFVDHLRASLP |
Ga0318502_106960202 | 3300031747 | Soil | SKDRALVPVVLDAASGFRHFGEEAVGEVPVAESGDPQAIRSFARRIERLCGVRLVDHLRATLPG |
Ga0318566_102367231 | 3300031779 | Soil | DAASSFRHFGEEAVGEVPVAESGDPQAIRSFARRIERLCGVRLVDHLRATLPG |
Ga0318497_105834511 | 3300031805 | Soil | VPVVLEAARQFHHFGEEAVADVPVAESGDGLAIRSFARRIERLCGVRFVDHLRASLPR |
Ga0318567_105372061 | 3300031821 | Soil | EFRHFGEEAVGEVPVAESGDAQAIRSFARRIERLCGVRLVDHLRATLPG |
Ga0307410_108746471 | 3300031852 | Rhizosphere | EPALVPEVLAAAAAFHHFGERAVAGVPVAFPGDPLAIRSFAKRVERLCGVRLVDYLKQGL |
Ga0307410_112096341 | 3300031852 | Rhizosphere | GDPAVVPVVLDAAVHFHHFGEQAVADVPVALPGDPLAIRSFARRIERLCGVRLVDHLKRQ |
Ga0318536_104725442 | 3300031893 | Soil | HHFGEEAVADVPVAESGDGLAIRSFARRIERLCGVRFVDHLRASLPR |
Ga0318551_104369241 | 3300031896 | Soil | LEAARRFHHFGDEAVADVPVAESGDGLAIRSFARRIERLCGVRFVDHLRASLPR |
Ga0307406_113761992 | 3300031901 | Rhizosphere | LAQRISADASVVRRILDAAAGFRHFGEQAVGAVPVALAGDPLAIRTFATRIEQLCGVRLVDHIKATLRP |
Ga0307407_106800881 | 3300031903 | Rhizosphere | LLAARIADDPAVVPVVLDAAVHFHHFGEQAVADVPVALPGDPLAIRSFARRIERLCGVRLVDHLKRQL |
Ga0306923_104019893 | 3300031910 | Soil | HFGDEAVADVPVAESGDGLAIRSFARRIERLCGVRFVDHLRASLPR |
Ga0307412_110973651 | 3300031911 | Rhizosphere | LAARIARDPDVVSAVLDAAVHFHHFGEQAVADVPVALPGDPLAIRSFARRIERLCGVRLVDHLKRQL |
Ga0214473_113957802 | 3300031949 | Soil | AVLEAAAHFQHFGAEAVGTVPVAMPGDPLAIRTFARRIERLCGVRLVDHLKTALEGQP |
Ga0306926_103142261 | 3300031954 | Soil | FGEEAVGEVPVAESGDPQAIRSFARRIERLCGVRLVDHLRATLPG |
Ga0307411_108669441 | 3300032005 | Rhizosphere | AAANFHHFGERAIGDVPVAMPGDPMAIRTFGKRIERLCGTRLVDYLKHDDARDT |
Ga0318513_101811731 | 3300032065 | Soil | VPVVLEAARRFHHFGDEAVADVPVAESGDGLAIRSFARRIERLCGVRFVDHLRASLPR |
Ga0318525_102692432 | 3300032089 | Soil | ADRSLVPVVLEAARRFHHFGDEAVADVPVAESGDGLAIRSFARRIERLCGVRFVDHLRASLPR |
Ga0318518_101739152 | 3300032090 | Soil | RLVPVVLEAARRFHHFGEEAVADVPVAESGDGLAIRSFARRIERLCGVRFVDHLRASLPR |
Ga0310896_104182192 | 3300032211 | Soil | GIVPTVLDAAVHFHHFGEQAVSDVPVALPGDPLAIRSFTRRIERLCGVRLVDHLKRQL |
Ga0214472_111054992 | 3300033407 | Soil | HFQHFGEEAIGEVPVAFPGDPVAIRTFAQRVERLCGVRLVDHLKASL |
Ga0214472_114918082 | 3300033407 | Soil | RHAQNASDLLAKRIAADPGVVPQVLDAAAHFQHFGEEAIGEVPVAFPGDPVAIRTFAQRVERLCGVRLVDHLKASL |
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