Metagenome Family F078496

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078496
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	56 residues
Representative Sequence	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLA
Number of Associated Samples	94
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	95.69 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (38.793 % of family members)
Environment Ontology (ENVO)	Unclassified (68.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.20% β-sheet: 0.00% Coil/Unstructured: 37.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF16264	SatD	34.48
PF14681	UPRTase	21.55
PF13671	AAA_33	0.86
PF13620	CarboxypepD_reg	0.86
PF13641	Glyco_tranf_2_3	0.86
PF10531	SLBB	0.86
PF07908	Obsolete Pfam Family	0.86
PF13646	HEAT_2	0.86
PF07969	Amidohydro_3	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	6.03 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	6.03 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	6.03 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6.03 %
Unclassified	root	N/A	4.31 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1035834	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300002558\|JGI25385J37094_10033382	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300002558\|JGI25385J37094_10190612	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300002560\|JGI25383J37093_10104999	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300002561\|JGI25384J37096_10258708	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300002908\|JGI25382J43887_10345486	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005093\|Ga0062594_103324204	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005166\|Ga0066674_10494779	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005167\|Ga0066672_10520441	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300005176\|Ga0066679_10823910	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005179\|Ga0066684_10248725	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300005186\|Ga0066676_10537594	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005440\|Ga0070705_101649972	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005445\|Ga0070708_100410182	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300005445\|Ga0070708_100494486	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1154	Open in IMG/M
3300005447\|Ga0066689_10577924	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005447\|Ga0066689_10994034	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005447\|Ga0066689_11001025	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005555\|Ga0066692_10068623	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300005556\|Ga0066707_10347933	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005556\|Ga0066707_10805385	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005557\|Ga0066704_10823005	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005561\|Ga0066699_11129282	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005569\|Ga0066705_10043090	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300005574\|Ga0066694_10079704	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300005575\|Ga0066702_10097130	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300005586\|Ga0066691_10237606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1068	Open in IMG/M
3300005586\|Ga0066691_10349302	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300005587\|Ga0066654_10386900	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300006794\|Ga0066658_10375541	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300006804\|Ga0079221_10218582	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300009012\|Ga0066710_104185774	Not Available	539	Open in IMG/M
3300009038\|Ga0099829_10679659	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300009088\|Ga0099830_10825727	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300010301\|Ga0134070_10222340	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300010303\|Ga0134082_10130761	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300010304\|Ga0134088_10132053	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300010304\|Ga0134088_10313767	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	758	Open in IMG/M
3300010321\|Ga0134067_10155223	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300010336\|Ga0134071_10602049	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300010364\|Ga0134066_10018801	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300010396\|Ga0134126_11561223	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300012189\|Ga0137388_11343943	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300012199\|Ga0137383_11252436	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012200\|Ga0137382_10757400	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012210\|Ga0137378_10068789	All Organisms → cellular organisms → Bacteria	3212	Open in IMG/M
3300012210\|Ga0137378_10733257	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300012285\|Ga0137370_10083493	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300012354\|Ga0137366_11135553	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300012356\|Ga0137371_10076275	All Organisms → cellular organisms → Bacteria	2599	Open in IMG/M
3300012360\|Ga0137375_10113897	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300012361\|Ga0137360_10963211	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300012683\|Ga0137398_11197839	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300012918\|Ga0137396_10534558	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300012925\|Ga0137419_10361906	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300012929\|Ga0137404_10409188	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300012930\|Ga0137407_11348224	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300012972\|Ga0134077_10125018	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300012975\|Ga0134110_10086347	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300014150\|Ga0134081_10163198	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300014154\|Ga0134075_10069680	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300015054\|Ga0137420_1218526	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300015357\|Ga0134072_10486443	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300017656\|Ga0134112_10006509	All Organisms → cellular organisms → Bacteria	3760	Open in IMG/M
3300017656\|Ga0134112_10108867	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300017656\|Ga0134112_10239920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	717	Open in IMG/M
3300018431\|Ga0066655_10783455	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300018431\|Ga0066655_11034978	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300018431\|Ga0066655_11206798	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300018468\|Ga0066662_10106440	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2004	Open in IMG/M
3300018468\|Ga0066662_10624187	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300018482\|Ga0066669_11100481	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300021086\|Ga0179596_10723732	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300026295\|Ga0209234_1233294	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300026296\|Ga0209235_1155657	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300026297\|Ga0209237_1022405	All Organisms → cellular organisms → Bacteria	3580	Open in IMG/M
3300026297\|Ga0209237_1058098	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300026301\|Ga0209238_1000791	All Organisms → cellular organisms → Bacteria	11774	Open in IMG/M
3300026301\|Ga0209238_1020422	All Organisms → cellular organisms → Bacteria	2529	Open in IMG/M
3300026305\|Ga0209688_1050771	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300026306\|Ga0209468_1045265	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300026306\|Ga0209468_1187549	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300026307\|Ga0209469_1070536	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300026308\|Ga0209265_1185660	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300026309\|Ga0209055_1182863	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300026312\|Ga0209153_1041864	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300026316\|Ga0209155_1034753	All Organisms → cellular organisms → Bacteria	2024	Open in IMG/M
3300026317\|Ga0209154_1070474	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300026325\|Ga0209152_10356219	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300026326\|Ga0209801_1071881	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300026327\|Ga0209266_1267191	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300026328\|Ga0209802_1059065	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300026331\|Ga0209267_1332237	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300026335\|Ga0209804_1078454	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300026343\|Ga0209159_1126281	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300026527\|Ga0209059_1074629	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300026527\|Ga0209059_1165637	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300026537\|Ga0209157_1259050	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300026538\|Ga0209056_10052767	All Organisms → cellular organisms → Bacteria	3623	Open in IMG/M
3300026538\|Ga0209056_10641609	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300026548\|Ga0209161_10383247	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300026548\|Ga0209161_10509051	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300026550\|Ga0209474_10227529	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300027643\|Ga0209076_1061199	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300027748\|Ga0209689_1421036	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300028792\|Ga0307504_10044302	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300028819\|Ga0307296_10314065	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300031152\|Ga0307501_10040943	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031152\|Ga0307501_10081741	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300031720\|Ga0307469_10907495	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300031720\|Ga0307469_10985988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	786	Open in IMG/M
3300031740\|Ga0307468_101087322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	711	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.55%
Loam	Environmental → Terrestrial → Soil → Loam	3.45%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	55.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	38.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10358341	3300002557	Grasslands Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLVIAALVAGTLLEPLATPSHAGLWWGRA
JGI25385J37094_100333821	3300002558	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGKLLAP
JGI25385J37094_101906122	3300002558	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTL
JGI25383J37093_101049992	3300002560	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALV
JGI25384J37096_102587081	3300002561	Grasslands Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASLLLVEAAVVIVALTVGTFLAPLVVPRAQGLFWGRIG
JGI25382J43887_103454861	3300002908	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLL
Ga0062594_1033242041	3300005093	Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLARPSLTGLWWG
Ga0066674_104947791	3300005166	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEVLFVVAALVLGTLLAPLARPSA
Ga0066672_105204411	3300005167	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLA
Ga0066679_108239101	3300005176	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRAGTLLVVEALFLIGALVAGTLLAPLATPSHAGLWWGRAALL
Ga0066684_102487251	3300005179	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALAVGTLLSP
Ga0066676_105375941	3300005186	Soil	VNPLFVVPLLVYTLAASLWPAQVDGRRRGGAVLLVEAAVVIVALTIGTFLAPLVVPVAKGLLWGRVGLLATGYLY
Ga0070705_1016499721	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGT
Ga0070708_1004101821	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELLAPLARPSADG
Ga0070708_1004944861	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNPLYVVPLLVYTLAATLWPSQVDGRRRARTLLLVEAVVVIAALVVGTLLARLATPSTTGLWWGR
Ga0066689_105779242	3300005447	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTFLAPLARPSAAGLWWG
Ga0066689_109940341	3300005447	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPS
Ga0066689_110010252	3300005447	Soil	VNPLFVVPLLVYTLAASLWPGQVDGRRRGATVLIVEAVVVAVALAVGTFLAPLVVPRAQGLFWGRVGLLAT
Ga0066692_100686231	3300005555	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRAGTLLVVEALFLIAALVAGTLLAPLVTPI
Ga0066707_103479333	3300005556	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGGAVLLVEAAVVIVALTIGTFLAPLVVP
Ga0066707_108053851	3300005556	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSA
Ga0066704_108230052	3300005557	Soil	VNPLFVVPLLVYTLAAALWPGQVDGRRRGATVLIVEAILVVVALAVGTFLAPLVVPRAQGLFWGRVGLLATGYLY
Ga0066699_111292821	3300005561	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIATIVLGTLLAPLARPSVAGLWWGRV
Ga0066705_100430901	3300005569	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIATIVLGTLLAPLARPSVDGLWWG
Ga0066694_100797043	3300005574	Soil	MNPLFVVPLLAYTLAATLWPAQVDGHRRAATLLLWEAVFVIIALV
Ga0066702_100971301	3300005575	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGKLLAPLARPSADGLWWGRVGL
Ga0066691_102376063	3300005586	Soil	VNPLYVVPLLAYTLAATLWPSQVDGRRRARTLLLVEAVVVIAAL
Ga0066691_103493022	3300005586	Soil	VNPLFVVPLLAYTLAATLWPDQVDGRRRARTLLVVEALLVVAALV
Ga0066654_103869002	3300005587	Soil	VNPLFPVPLLAYTLAATFWPHQVDGQRRGRVLLLVEAGILIATLVAGTYL
Ga0066696_109246401	3300006032	Soil	VNPLFPVPLLAYTLAATFWPHQVDGHRRGRVLLLVEAGILIATLVAG
Ga0066658_103755411	3300006794	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRASTLLVVEALLVIAALVAGTLLAPHAT
Ga0079221_102185823	3300006804	Agricultural Soil	VNPLYVVPLLAYTLAATLWPTQVDGRRRARTLLMVEAVLIIAALVVGRLLAPLATPSA
Ga0079221_114396441	3300006804	Agricultural Soil	VNPLYVVPLLAYTLAATLWPSQVDGRRRARTLLLVEAVI
Ga0066710_1041857742	3300009012	Grasslands Soil	MNPLFVVPLVTYTLVATLLPAQVDGRRRGGVLLASALWIVIVALVA
Ga0099829_106796591	3300009038	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELL
Ga0099830_108257271	3300009088	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPDQVDGRRRARALLFGEALFVTGALVVGKLLEPLVHALP
Ga0134070_102223402	3300010301	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRARTLLFGETLFVIAALVLGTLLAPLARPSVDGLWWG
Ga0134082_101307613	3300010303	Grasslands Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLLVEALFVVAALVVG
Ga0134088_101320533	3300010304	Grasslands Soil	VNPLSVVPLLVYTLAATLWPTQVDSRRRGASLLLVEAVIVAAAVVAGGYLAELVVPR
Ga0134088_103137672	3300010304	Grasslands Soil	VNPLYVVPLLVYTLAATLWPAQVDGRRRARTLLIVEGVLVIAALVAGTL
Ga0134067_101552231	3300010321	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIATIVLGTLLDPLARPSVDGLWWGRVAFRH
Ga0134071_106020492	3300010336	Grasslands Soil	VNPLFVVPLLAYTLAATLWPSQVDGHRGGRALLFGEVLFVIAALVLGT
Ga0134066_100188013	3300010364	Grasslands Soil	VNPLFVVPLLAYTLAATLWPHQVDGRRRARALLVGEALFVIAALVAGTLL
Ga0134126_115612232	3300010396	Terrestrial Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLAR
Ga0137388_113439431	3300012189	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLARPSLTGLW
Ga0137383_112524361	3300012199	Vadose Zone Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALAVGTLLSPLVVPRAQGLFWGR
Ga0137382_107574002	3300012200	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELLAP
Ga0137379_113810661	3300012209	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLV
Ga0137378_100687895	3300012210	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSADGLWWG
Ga0137378_107332573	3300012210	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLVIA
Ga0137370_100834934	3300012285	Vadose Zone Soil	VNPLFVVPLLAYALAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLAR
Ga0137366_111355532	3300012354	Vadose Zone Soil	VNPLYVVPLLAYTLAATLWPAQVDGRRRARTLLLVEAVVVIAALVAGTFLAWRAEPGTCRRRG
Ga0137371_100762756	3300012356	Vadose Zone Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRGSTLLFGEAVWVIVALV
Ga0137375_101138973	3300012360	Vadose Zone Soil	VNPLFVVPLLAYTLVAALWPAQVDGHRRGAPVLVVEALIVIAALA
Ga0137360_109632111	3300012361	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSADGLWWGRVGLL
Ga0137398_111978392	3300012683	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLA
Ga0137396_105345581	3300012918	Vadose Zone Soil	VNPLFVVPLLAYALAATLWPAQVDGRRRGRALLFGEASFVIAALVLGKL
Ga0137419_103619061	3300012925	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTL
Ga0137404_104091883	3300012929	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLARPSLTGLWWGRVA
Ga0137407_113482241	3300012930	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAAL
Ga0134077_101250181	3300012972	Grasslands Soil	VNPLFVVPLLAYTLAATLWPSQVDGRRGGRALLFGEVLFVIAALVLGTLLAPLARPS
Ga0134110_100863473	3300012975	Grasslands Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLVVAALVVGTLLAPLATPNHAELSWGR
Ga0134081_101631981	3300014150	Grasslands Soil	VNPLFVVPLLAYTLAATLWPHQVDGRRRARALLVGEALFVIAAL
Ga0134075_100696801	3300014154	Grasslands Soil	VNPLYVVPLLAYTLAATLWPTQVDGRRRATTLLMSEAGVLIVALVAGIFF
Ga0137420_12185261	3300015054	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELLAPLARPSA
Ga0134072_104864431	3300015357	Grasslands Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGGAVLLVEAAVVIVALTIGTFLAPLVVPVAKGLLWGRV
Ga0134112_100065091	3300017656	Grasslands Soil	VNPLFVVPLLVYTLAAALWPGQVDGRRRGATVLIVEAVLVVVALAVGTFLAPLVVPRAQGLFWGRVGLL
Ga0134112_101088671	3300017656	Grasslands Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASVLLVEAAVVIVALTIGTFLAPLVVPV
Ga0134112_102399201	3300017656	Grasslands Soil	VNPLYVVPLLVYTLAATLWPAQVDGRRRARTLLIVEGVLVIAALVAGTLLARLATPSAQG
Ga0134083_102385901	3300017659	Grasslands Soil	VNPLFVVPLLAYTLAATLWPHQVDGRRRARALLVGEALF
Ga0066655_107834551	3300018431	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEVLFVVAALVLGTLLAPLARPSAA
Ga0066655_110349781	3300018431	Grasslands Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEVLFVVAALVLGTLLAPLARPSAA
Ga0066655_112067982	3300018431	Grasslands Soil	VNPLSVVPLLVYTLAATLWPTQVDSRRRGASLLLVEAVIVAAAVVAGGYLAELVVPRSQGLWWG
Ga0066662_101064404	3300018468	Grasslands Soil	VNPLYVVPLLVYTLAATLWPAQVDGRRRARTLLIVEGVLVIAALVA
Ga0066662_106241871	3300018468	Grasslands Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRAGTLLVVEALFLIAALVAGTLLAPLVTPIRAGLWWGR
Ga0066669_111004811	3300018482	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSAD
Ga0179596_107237321	3300021086	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELLAPLA
Ga0209234_12332941	3300026295	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLA
Ga0209235_11556571	3300026296	Grasslands Soil	VNPLFVVPLLVYTLAAALWPGQVDGRRRGATVLIVEAVLVVVALAVGTFLAPLVVPRAQGLFWGRVGLLAT
Ga0209237_10224056	3300026297	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSADGLWWGR
Ga0209237_10580981	3300026297	Grasslands Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEVLFVIAALVLGM
Ga0209238_100079113	3300026301	Grasslands Soil	VNPLFVVPLLVYTLAAALWPGQVDGRRRGATVLIVEAILVVVALAVGTFLAPLVVPRAQGLFW
Ga0209238_10204224	3300026301	Grasslands Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLVIAALVAGT
Ga0209688_10507712	3300026305	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGAPLLLVEAAVVIVALTVGTFLSPLVVPR
Ga0209468_10452651	3300026306	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSADGLWWGRV
Ga0209468_11875491	3300026306	Soil	VNPLSVVPLLVYTLAATLWPAQVDTRRRGASLLFVEAVIVAAAVGAGGYLAQ
Ga0209469_10705361	3300026307	Soil	VNPLFVVPLLAYALAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLAPLARPSV
Ga0209265_11856602	3300026308	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASQLLVEAAVVIVALTVGTFLAPLVVPRA
Ga0209055_11828631	3300026309	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRASTLLVVEALLVIAALVAGTLLAPLATPSHAG
Ga0209153_10418643	3300026312	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVVEALLVVAALVVGTLLAPLATPNHAGLWWGRAAL
Ga0209155_10347531	3300026316	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASLLLVEAAVVIVALTVGTFLAPLVV
Ga0209154_10704743	3300026317	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALAVGTLLSPL
Ga0209152_103562192	3300026325	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALA
Ga0209801_10718813	3300026326	Soil	VNPLFVVPLLAYALAGTLWPGQVDGRRRGRALLFGEALIVIAALVLGTLLAPLARPSVDG
Ga0209266_12671911	3300026327	Soil	VNPLFVVPLLAYTLAATLWPHQVDGRRRARALLVGEALFVIAALV
Ga0209802_10590651	3300026328	Soil	MNPLFVVPLLAYTLAATLWPAQVDGHRRAATLLLWEAVFVIIALVAGTYFARLAK
Ga0209267_13322372	3300026331	Soil	VNPLSVVPLLAYTLAATLWPAQVDGRRRGRALLFGEALFVIAAATVHL
Ga0209804_10784543	3300026335	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGGAVLLVEAAVVIVALTIGTFLAPLVVPVAKG
Ga0209159_11262811	3300026343	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTFLAPLARPSAAGLWWGRVALLA
Ga0209059_10746291	3300026527	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASLLLVEAAVVIVALTVGTFLAPLVVPRAQGLF
Ga0209059_11656371	3300026527	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASVLLVEVAIVIVALTIGTFLAPLAV
Ga0209157_12590502	3300026537	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEVLFVVAALVLGTLLAPLAR
Ga0209056_100527672	3300026538	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIATIVLGTLLAPLARPSVAGLWTAPPERSMSPAAAR
Ga0209056_106416091	3300026538	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGASVLLVEAAVVIVALTIGT
Ga0209161_103832471	3300026548	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALAVGTLLSPLV
Ga0209161_105090511	3300026548	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEVLFVIAALVLGTLLAPLARPSADGLWWGRVG
Ga0209474_102275291	3300026550	Soil	VNPLFVVPLLVYTLAAALWPAQVDGRRRGVPLLLVEAAVVIVALAVGT
Ga0209076_10611991	3300027643	Vadose Zone Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLIGEALFVIAALVLGELLAPLARPSADGLWWG
Ga0209689_14210362	3300027748	Soil	VNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLG
Ga0307504_100443023	3300028792	Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGEALFVIAALVLGTLLEPLARPSLTGLWW
Ga0307296_103140651	3300028819	Soil	VNPLFVVPLLAYTLAATLWPAQVDGRRRARTLLVGEALILIAALIAG
Ga0307501_100409431	3300031152	Soil	VNPLFVVPLLAYTLAAALWPAQVDGRRRARTLLVGEALILIAALIAGTYLARLARPS
Ga0307501_100817412	3300031152	Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRARTLLFGEVLFVIAALVLGTLL
Ga0307469_109074951	3300031720	Hardwood Forest Soil	MNPLFVVPLLAYTLAATLWPGQVDGRRRGRALLFGETLFVIAALVLGML
Ga0307469_109859881	3300031720	Hardwood Forest Soil	VNPLSVVPLLVYTLGATLWPAQVDGRRRARTLLVVEALLIIAALV
Ga0307468_1010873221	3300031740	Hardwood Forest Soil	VNPLYVVPLLAYTLAATLWPSQVDGRRRARTLLLVEAVVVIAALVVGTLLARLATP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078496

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences