Metagenome / Metatranscriptome Family F078464

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078464
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	69 residues
Representative Sequence	GIGEVVEGALATVTPGAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV
Number of Associated Samples	80
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.83 %
% of genes near scaffold ends (potentially truncated)	48.28 %
% of genes from short scaffolds (< 2000 bps)	93.10 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.276 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.172 % of family members)
Environment Ontology (ENVO)	Unclassified (36.207 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.448 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.45% β-sheet: 0.00% Coil/Unstructured: 93.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF12762	DDE_Tnp_IS1595	8.62
PF13614	AAA_31	1.72
PF02416	TatA_B_E	1.72
PF13358	DDE_3	1.72
PF01610	DDE_Tnp_ISL3	0.86
PF03633	Glyco_hydro_65C	0.86
PF01381	HTH_3	0.86
PF13424	TPR_12	0.86
PF04191	PEMT	0.86
PF00296	Bac_luciferase	0.86
PF00239	Resolvase	0.86
PF01609	DDE_Tnp_1	0.86
PF04255	DUF433	0.86
PF04471	Mrr_cat	0.86
PF00580	UvrD-helicase	0.86
PF01656	CbiA	0.86
PF00486	Trans_reg_C	0.86
PF13374	TPR_10	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	1.72
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.86
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.86
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	0.86
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.86
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.86
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.86
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.86
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.86
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.86
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.86
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.86
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.86
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.86
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.86
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.72 %
Unclassified	root	N/A	1.72 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.86 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	83.62 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.72 %
Unclassified	root	N/A	1.72 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.86 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	83.62 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.72 %
Unclassified	root	N/A	1.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.86 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	83.62 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.72 %
Unclassified	root	N/A	1.72 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.86 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.86 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	83.62 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.72 %
Unclassified	root	N/A	1.72 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.86 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	83.62 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	1.72 %
Unclassified	root	N/A	1.72 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.86 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	83.62 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.72 %
Unclassified	root	N/A	1.72 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_100243709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	566	Open in IMG/M
3300005181\|Ga0066678_10790921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	628	Open in IMG/M
3300005289\|Ga0065704_10236376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1028	Open in IMG/M
3300005295\|Ga0065707_10292486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1022	Open in IMG/M
3300005332\|Ga0066388_100676984	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005332\|Ga0066388_102507679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	937	Open in IMG/M
3300005332\|Ga0066388_108260165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	519	Open in IMG/M
3300005347\|Ga0070668_100628475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	942	Open in IMG/M
3300005445\|Ga0070708_100338403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1418	Open in IMG/M
3300005447\|Ga0066689_10990161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	518	Open in IMG/M
3300005451\|Ga0066681_10918882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	524	Open in IMG/M
3300005454\|Ga0066687_10507925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	713	Open in IMG/M
3300005459\|Ga0068867_101886104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	563	Open in IMG/M
3300005471\|Ga0070698_100328246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1461	Open in IMG/M
3300005536\|Ga0070697_100552427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1010	Open in IMG/M
3300005545\|Ga0070695_101751413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	521	Open in IMG/M
3300005586\|Ga0066691_10550249	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005764\|Ga0066903_106321984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	618	Open in IMG/M
3300006049\|Ga0075417_10708373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	517	Open in IMG/M
3300006796\|Ga0066665_11395778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	542	Open in IMG/M
3300006844\|Ga0075428_100245072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1933	Open in IMG/M
3300006847\|Ga0075431_100882641	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300006853\|Ga0075420_100185026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1821	Open in IMG/M
3300006853\|Ga0075420_101708833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	539	Open in IMG/M
3300006880\|Ga0075429_100752383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	854	Open in IMG/M
3300006969\|Ga0075419_10927219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	630	Open in IMG/M
3300006969\|Ga0075419_10953911	Not Available	622	Open in IMG/M
3300009038\|Ga0099829_11200904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	628	Open in IMG/M
3300009038\|Ga0099829_11772532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	506	Open in IMG/M
3300009089\|Ga0099828_10123659	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2263	Open in IMG/M
3300009089\|Ga0099828_11907339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	521	Open in IMG/M
3300009100\|Ga0075418_10555615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1234	Open in IMG/M
3300009100\|Ga0075418_12793870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	533	Open in IMG/M
3300009162\|Ga0075423_10279995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1748	Open in IMG/M
3300009162\|Ga0075423_12649585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	548	Open in IMG/M
3300009162\|Ga0075423_13108952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	509	Open in IMG/M
3300009176\|Ga0105242_12942149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	527	Open in IMG/M
3300009792\|Ga0126374_10527678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	857	Open in IMG/M
3300009792\|Ga0126374_11147995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	619	Open in IMG/M
3300009812\|Ga0105067_1070088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	590	Open in IMG/M
3300009817\|Ga0105062_1082692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	620	Open in IMG/M
3300009840\|Ga0126313_10785317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	774	Open in IMG/M
3300010029\|Ga0105074_1004447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2052	Open in IMG/M
3300010038\|Ga0126315_10227365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1132	Open in IMG/M
3300010043\|Ga0126380_11262400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	641	Open in IMG/M
3300010323\|Ga0134086_10106317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	996	Open in IMG/M
3300010323\|Ga0134086_10366800	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300010333\|Ga0134080_10079488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1326	Open in IMG/M
3300010358\|Ga0126370_10165215	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1632	Open in IMG/M
3300010358\|Ga0126370_12014726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	564	Open in IMG/M
3300010359\|Ga0126376_11277730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	753	Open in IMG/M
3300010359\|Ga0126376_11819481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	647	Open in IMG/M
3300010360\|Ga0126372_10159119	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300010360\|Ga0126372_10201612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1657	Open in IMG/M
3300010360\|Ga0126372_11922581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	637	Open in IMG/M
3300010362\|Ga0126377_10918866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	938	Open in IMG/M
3300010362\|Ga0126377_12054533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	647	Open in IMG/M
3300010366\|Ga0126379_10354904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1498	Open in IMG/M
3300010366\|Ga0126379_11579135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	761	Open in IMG/M
3300010366\|Ga0126379_12535897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	611	Open in IMG/M
3300010366\|Ga0126379_13557600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	522	Open in IMG/M
3300010376\|Ga0126381_101565243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	952	Open in IMG/M
3300010400\|Ga0134122_10987716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	823	Open in IMG/M
3300012022\|Ga0120191_10132745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	551	Open in IMG/M
3300012096\|Ga0137389_11802993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	508	Open in IMG/M
3300012202\|Ga0137363_10098593	All Organisms → cellular organisms → Bacteria	2216	Open in IMG/M
3300012202\|Ga0137363_11672228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	529	Open in IMG/M
3300012205\|Ga0137362_10340457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1298	Open in IMG/M
3300012206\|Ga0137380_10458644	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300012206\|Ga0137380_11000461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	715	Open in IMG/M
3300012206\|Ga0137380_11290448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	615	Open in IMG/M
3300012206\|Ga0137380_11478253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	564	Open in IMG/M
3300012207\|Ga0137381_10339751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1308	Open in IMG/M
3300012207\|Ga0137381_10397137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1203	Open in IMG/M
3300012207\|Ga0137381_10898595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	766	Open in IMG/M
3300012207\|Ga0137381_11353502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	604	Open in IMG/M
3300012209\|Ga0137379_10211833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1852	Open in IMG/M
3300012209\|Ga0137379_11144119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	684	Open in IMG/M
3300012210\|Ga0137378_10312432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1462	Open in IMG/M
3300012211\|Ga0137377_11593546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	577	Open in IMG/M
3300012349\|Ga0137387_10100751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2013	Open in IMG/M
3300012357\|Ga0137384_10951690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	691	Open in IMG/M
3300012359\|Ga0137385_10748878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	814	Open in IMG/M
3300012359\|Ga0137385_10897550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	733	Open in IMG/M
3300012362\|Ga0137361_10454552	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1176	Open in IMG/M
3300012363\|Ga0137390_10541090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1136	Open in IMG/M
3300012923\|Ga0137359_10450286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1139	Open in IMG/M
3300012923\|Ga0137359_11524844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	556	Open in IMG/M
3300012929\|Ga0137404_11671041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	591	Open in IMG/M
3300012930\|Ga0137407_10319038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1424	Open in IMG/M
3300012930\|Ga0137407_11188348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	724	Open in IMG/M
3300012930\|Ga0137407_11921266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	564	Open in IMG/M
3300012930\|Ga0137407_12235537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	523	Open in IMG/M
3300012948\|Ga0126375_11188014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	634	Open in IMG/M
3300012948\|Ga0126375_11254421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	620	Open in IMG/M
3300012948\|Ga0126375_11806953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	534	Open in IMG/M
3300012951\|Ga0164300_10560001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	666	Open in IMG/M
3300012971\|Ga0126369_10125472	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2372	Open in IMG/M
3300012971\|Ga0126369_11926983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	679	Open in IMG/M
3300013308\|Ga0157375_10682062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1182	Open in IMG/M
3300014488\|Ga0182001_10466354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	571	Open in IMG/M
3300014968\|Ga0157379_10140597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2176	Open in IMG/M
3300015053\|Ga0137405_1234120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	533	Open in IMG/M
3300015374\|Ga0132255_102963243	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300016422\|Ga0182039_11968864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	537	Open in IMG/M
3300025939\|Ga0207665_10092088	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300027880\|Ga0209481_10519202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	615	Open in IMG/M
3300031094\|Ga0308199_1121029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	596	Open in IMG/M
3300031421\|Ga0308194_10365744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	517	Open in IMG/M
3300031945\|Ga0310913_10612226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	772	Open in IMG/M
3300032000\|Ga0310903_10255836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	845	Open in IMG/M
3300032075\|Ga0310890_10328608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1110	Open in IMG/M
3300032180\|Ga0307471_103139561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	586	Open in IMG/M
3300032205\|Ga0307472_100122550	All Organisms → cellular organisms → Bacteria → Proteobacteria	1841	Open in IMG/M
3300032261\|Ga0306920_102874785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.90%
Host-Associated	Host-Associated	18.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.90%
Plants	Host-Associated → Plants	18.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.66%
Loam	Environmental → Terrestrial → Soil → Loam	7.76%
Sand	Environmental → Terrestrial → Soil → Sand	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.59%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.59%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1002437091	3300000955	Soil	MSEIVEGALAAITPVTLTPGAIVVLPPGIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0066678_107909212	3300005181	Soil	VWQRPLALVQHGIGEVVEGALAAVAPVAFVPRSVVVIALRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREHWHG*
Ga0065704_102363761	3300005289	Switchgrass Rhizosphere	PLTPVEQGMGKVVEGALAAVTPVAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV*
Ga0065707_102924861	3300005295	Switchgrass Rhizosphere	MGKVVEGALAAVTPGAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV*
Ga0066388_1006769841	3300005332	Tropical Forest Soil	EVVKGALTAVAPVAFAPRAIVVIAPRIDSVALAPGTLEWTIFPSQRMEVGLTLFDVEELVDVREHWHG*
Ga0066388_1025076792	3300005332	Tropical Forest Soil	MGEVIEGAFATVAPVTFTPGAVVIRPPRIDVLALAPGTLEGTIFPPQRMDVGLTLVDIEELVDV*
Ga0066388_1082601651	3300005332	Tropical Forest Soil	AAVTPVAFTPGAIVVRPPRIDVLTLAPGTLERPLFPPQHMDVGLTLVDVKEMVKV*
Ga0070668_1006284751	3300005347	Switchgrass Rhizosphere	GIGEVVEGALATVTPGAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV*
Ga0070708_1003384032	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSEIVEGALATMTPVALTPGAIMVLPPGIDVLTLAPGTLEGTIFPPQRVDVRLALFEAEELVDI*
Ga0066689_109901611	3300005447	Soil	MGEVIEGAVAPVTPVAFTPGSIVILPPRIHIPALAPGTLEGAIFPPQRMDVGLTLVDVEELV
Ga0066681_109188822	3300005451	Soil	LGEVIEGALAAVAPVAFTPGTIVVLPPWIDIPPLAPGTLEGTIFPPQRMDIGLTLVDVEELVDV*
Ga0066687_105079252	3300005454	Soil	MQQGVGEIIEGTLAAVAPVAFAAGAIVVRPPRIDVLALAPGTLEGAIFPAQRVDVGLALSDVEEVVDVREHGHG*
Ga0068867_1018861041	3300005459	Miscanthus Rhizosphere	GVGEIVEGALAAVTPGAFTPGSIVVIPPGIDVLALASGTLEGTIFPPQCMEVGLTLVGAEEVVDVREHGHR*
Ga0070698_1003282461	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GVGEIVEGALAAVTPVAFAPGAVVVLPPRIDVLALAPGTLEWSLFPPQRMDVGVTLFGVEEVVDVREHRHG*
Ga0070697_1005524272	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RLQPSHQVAFAAGAVVVLPPRIDVLALAPGTLERTLFPSQCMDVGLTLFDVEELVDVREHRHG*
Ga0070695_1017514132	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGEVIEGALAPVTPVAFTPGSIVILPPRIHIPALAPGTLEGTIFPPQRMDVGLTLV
Ga0066691_105502492	3300005586	Soil	GEVVEGALAAVAPVAFVPRSVVVIALRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREHWHG*
Ga0066903_1063219842	3300005764	Tropical Forest Soil	IIEGALAAVTPVAFASGTVVIRPPRIDVLALAPGTLEGPIFPPERMDIDVAAIGVEELVDV*
Ga0075417_107083732	3300006049	Populus Rhizosphere	EQGVGEIVEGALTAVAPVEFASGSVVIIALWIDSLALAPGTLEGTIFPSQRMDVGLTLFAVEELVDVRKHWHG*
Ga0066665_113957781	3300006796	Soil	VWQRPLALVQHGIGEVVEGALAAVAPVAFVPRSVVVIALRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREH
Ga0075428_1002450722	3300006844	Populus Rhizosphere	MEHRIGEVIEGALAAVAPIAFTVWAIVIRPPRIDGLALAPGTLERTLFPPQRVDVGLTVFDVEELMEVRKRRHR*
Ga0075431_1008826412	3300006847	Populus Rhizosphere	MREIVEGALAAITPVALTPGAIVVRPPGIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0075420_1001850261	3300006853	Populus Rhizosphere	VEQGSGEVVKGALATVTPVPFTSGAIVVRPPRINILALAPGTLEGTIFPPQRMDVGLTLV
Ga0075420_1017088332	3300006853	Populus Rhizosphere	AGKYYVLRPRERLQIIEGALAAITPVAFASGSIVIRPPRIDVLALAPGTLEGTIFPPQRMNIDVAAISVEEVVEV*
Ga0075429_1007523832	3300006880	Populus Rhizosphere	MEQGVGEIVEGALTAVAPVEFASGSVVIIALWIDSLALAPGTLEGTIFPSQRMDVGLTLFAVEELVDVRKHWHG*
Ga0075419_109272192	3300006969	Populus Rhizosphere	MEQGVGEIVEGALTAVAPVEFASGSVVIIALWIDSLALAPGTLEGTIFPPQRMDVGVTLIDVEELVDV*
Ga0075419_109539111	3300006969	Populus Rhizosphere	GALAAVTPVAFAAGAVVVLPPRIDVLALASGTLKGAIFPSQRMDVGVTLVNVEEVVDVCKHRHG*
Ga0099829_112009042	3300009038	Vadose Zone Soil	MGQIVEGALAAVAPVAFAAGAVVVIAPRINVVALTAGALQWAIFPSQRMDVDLTLVDVEEVVDV*
Ga0099829_117725321	3300009038	Vadose Zone Soil	RPLTLVQQGIGEVIEGALAAVAPVAFAPRSVVVIAPRIDILALTPGTLERPIFPPQRMDVGLTLVDVEEVVYV*
Ga0099828_101236592	3300009089	Vadose Zone Soil	MEQRIGEIVEGALAAVTPGAFTPRSVVVITPGVDVLALAPGTLKRTIFPPQCMDVGLTLVDVEKLVDVREHRHG*
Ga0099828_119073391	3300009089	Vadose Zone Soil	VEGALAAVTPVAFAPGSVVVLPPRVDVLALAPGTLEWAIFLSQRMDVGLTLIDVEELVDV
Ga0075418_105556153	3300009100	Populus Rhizosphere	SLAAIAPVAFTPGAVVIRAPRINVVALAPGTLQRALFPAQRMNVGLTLFGVEELVDVREHWHR*
Ga0075418_127938702	3300009100	Populus Rhizosphere	VEQCIGQIIEGALAAVTPVAFAAGAVVIPPPRIDVLALAPGTLEGPIFPPERMDIDLAAIGVEEVVEV*
Ga0075423_102799952	3300009162	Populus Rhizosphere	MHHRIGEIVESALAAVAPVAFAPRSVVVRPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0075423_126495852	3300009162	Populus Rhizosphere	CEGALAAVQECACEVIEGALATVTPVPFTPGAIVVRPLRIDISALAPGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0075423_131089521	3300009162	Populus Rhizosphere	VVEGALAAVAPVAFAPRSVVVIAPRINVLALAPGTLERTIFPSQCMNIGLTPFGVEEVVEI*
Ga0105242_129421491	3300009176	Miscanthus Rhizosphere	MRQRPLALMEHSVGEIVEGALAAVAPVALTPGAVVVRAPRIDVLALAPGTLQGTIFPPQRMDVGLTLVDVEELVDV*
Ga0126374_105276782	3300009792	Tropical Forest Soil	RQRPLAAVEQSSGEVVEGTLAAVTPVAFTPGAIVVRPPRIDVLTLAPGTLERPLFPPQHMDVGLTLVDVKEMVKV*
Ga0126374_111479951	3300009792	Tropical Forest Soil	ALVQQGVGEVIEGALAPVTPVALTPGAVVVLPPRIDVLALAPGTLESPIFPPECMDVGVTLVDVEELMEV*
Ga0105067_10700881	3300009812	Groundwater Sand	VEQGIGEVVEGALAAVTPVAFAPGSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0105062_10826922	3300009817	Groundwater Sand	MHHRIGEIVESALAAVAPVAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0126313_107853172	3300009840	Serpentine Soil	MGKVVEGALAAVTPVAFAPGAVVVRPPRIDVLALAPGTLEWTIFPPEPMDIGVAGIGVEELVYVRKHRHG*
Ga0105074_10044471	3300010029	Groundwater Sand	QNPVRQRPLALMHHRIGEIVESALAAVAPVAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0126315_102273651	3300010038	Serpentine Soil	PVWERPLALVEHGVSEIIEGTLAAVTPVAFASGAVVIIPPRIHVLALAPGTLQGTIFPPQCMDVGLTLVGVEELVDV*
Ga0126380_112624001	3300010043	Tropical Forest Soil	MEQGRGEVVEGALAPVTPVPFTPGAIVVRPPRIDISALAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0134086_101063171	3300010323	Grasslands Soil	ALAAIAPVALAPGSIVVLPPRIEVLALAPGTLEGAIFPPQRMDIGLTLVDVKELVDV*
Ga0134086_103668001	3300010323	Grasslands Soil	EIVESALAAVAPGAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLVGIEELVEVREHWHG*
Ga0134080_100794882	3300010333	Grasslands Soil	MHHRIGEIVESALAAVAPGAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0126370_101652151	3300010358	Tropical Forest Soil	GALAAITPVAFASGSIVICPPRIDVPALAPGTLEGPLFPPERMDIDVAAIGVEEVVDV*
Ga0126370_120147261	3300010358	Tropical Forest Soil	MGEVIEGALAPVTPVPFTAGAIVIRPPRIDISALAPGTLEGTIFPPQRMDVRLALFGIKEVVQMREYRHG*
Ga0126376_112777301	3300010359	Tropical Forest Soil	VEGAPTAVAPGAFASGSVVIIAPWIDSLALAPGTLEWTFFPSQRLDVRVTLFGVEELVDVREHQHG*
Ga0126376_118194811	3300010359	Tropical Forest Soil	MREIVEGALAAMTPVALTPGAIMVLPPGIDVLTLAPGTLEGTIFPPQRMDVCLALFEAEELVDI*
Ga0126372_101591191	3300010360	Tropical Forest Soil	PLALMEHGVGEIVEGALAAVTPGAFASGTVVIRPPRIDVLALAPGTLEGPIFPLERMDIDVAAIGVEELVDV*
Ga0126372_102016121	3300010360	Tropical Forest Soil	MEERIGEVIEGALAAVAPVAFTSGSVVISPPRIDILALAPGTLEGALYPPERVARGVAGSGVEELVDIREHRHG*
Ga0126372_119225811	3300010360	Tropical Forest Soil	MRESVAGALAAITPGALTPGAIVVRPPGIDVVTLAPGTLEGTICSPQRMDVGLA
Ga0126377_109188661	3300010362	Tropical Forest Soil	QKGGQEPVRQRSLALVEQSIGEVVEGALAPIAPVAFAPGPVVVRTPRIDIGALTSGALESPIFPPQRMDVGLTLFSAEELVDV*
Ga0126377_120545331	3300010362	Tropical Forest Soil	MGEVIEGAVAPVAPVTFTPGSVVIRPPRIDVLALAPGTLEGTIFPPQRMDVGLTLVDIE
Ga0126379_103549042	3300010366	Tropical Forest Soil	VEQGISEVIEGALAAVAPITFAPRSIVVHSPWVDVLALAPRTLEGTIFPPQRMDIDVAAIGVEEVVDVCKHWHG*
Ga0126379_115791352	3300010366	Tropical Forest Soil	MEEGISEVVEGALAPVTPVAFAPGAVVIRPPRIDVLALAPGTLEWAILPPQRMDVGVTLFGVEEVVDV*
Ga0126379_125358971	3300010366	Tropical Forest Soil	MEERIGQVIEGAFAAVTPVAFAAGAVVVRAPWIDVLALAPGTLEWAIFPPQRMDIGLTLVNVEELVDI*
Ga0126379_135576002	3300010366	Tropical Forest Soil	RPLAPVEQGMREIVEGALAAITPVALTPGAIVVLPPGIDVVTLAPGTLEGTIFPPQRMDVCLARFEAEELVDI*
Ga0126381_1015652432	3300010376	Tropical Forest Soil	MGEVIEGALATVTPVPFTPGSIVILPPRIHIPALAPGTLEGAIFPPQRMDVGLTLVDVEELVEV
Ga0134122_109877162	3300010400	Terrestrial Soil	VEQGIGEVVEGALATVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0120191_101327452	3300012022	Terrestrial	MKGALAAVAPVAFAAGAIMVVPPRIDILALAPGTLEGPIFPPERMDIDVAAIGVEEVVEV
Ga0137389_118029932	3300012096	Vadose Zone Soil	GEVVEGAFAAVAPGAFTPGSIVIRPPRIDVLALAPGTLEGTIFPSQRMDVDLTLVDVEEVVDVCKHRHG*
Ga0137363_100985932	3300012202	Vadose Zone Soil	MQQGIGQVIEGTLAAVAPVTFASGAVVVRPPRIDVLALAPGTLECAIFPSQRVDVGLALIDVEELVEVREHWHG*
Ga0137363_116722282	3300012202	Vadose Zone Soil	MQQGIDEIIEGALATVAPGAFAAGAIMVRPPRIDVLALAPGTLERTLFPSQCMDGGLTLFDVEELVDVREHRHG*
Ga0137362_103404572	3300012205	Vadose Zone Soil	MGEVVEGALAAVTPVTFTPGAIVVIPPRIDVLALAPGTLERVLFPPERMDVGLTVFGVEELVDV*
Ga0137380_104586442	3300012206	Vadose Zone Soil	LAAITPVAFAAGAIVVRPPRINVLALTPGTLEGPIFPPECVDVRLALFGTEELMEV*
Ga0137380_110004612	3300012206	Vadose Zone Soil	MGQIVEGALAAMAPVALAPGAIVVLPPRIDILALAPVTLEGPIFPSQRMDVGVTLVDVEEFVHVREHWHR*
Ga0137380_112904482	3300012206	Vadose Zone Soil	MSEIVEGALAAITPVTLTPGAIVVLPPRIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0137380_114782531	3300012206	Vadose Zone Soil	EIVEGALAAVAPVAFASGSVVIIAPWIDSVALAPGTLEGTIFPSQRMDVGLTLFGVEEVVDVREHRHG*
Ga0137381_103397512	3300012207	Vadose Zone Soil	MSEIVEGALAAMTPVALTPGAIMVLPPGIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0137381_103971372	3300012207	Vadose Zone Soil	MHHRIGEIVESALAAVAPVAFAPRSVVVLPSRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0137381_108985951	3300012207	Vadose Zone Soil	VEQRIGQILEGALAAVTPGACASGAVVVRPPGIDVLALATGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137381_113535022	3300012207	Vadose Zone Soil	MEQGLGEVVEGALATVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0137379_102118332	3300012209	Vadose Zone Soil	MEQGLGEVVEGALATVTPVAFAPGAVVVRPPRIDVLALAPGTLEWAIFPPQRMDVVVTLFGVEEVVDV*
Ga0137379_111441192	3300012209	Vadose Zone Soil	VQEGLGEVVEGALAAVTPIAFAAGAVVVLPPGIDVLALAPGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137378_103124321	3300012210	Vadose Zone Soil	QNPVRQRPPTLVEQGIGEIVEGALATVTPVAFAAGSVVVIPPRIDISALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0137377_115935461	3300012211	Vadose Zone Soil	MEQRIGEVVEGALTAVAPVAFASGSVVIIAPWIDSVALAPGTLEWTIFPSQRMDVGLTLFGVEEVVDVREHRHG*
Ga0137387_101007511	3300012349	Vadose Zone Soil	VRQRPLTLVEQRIGQILEGALAAVTPGACASGAVVVRPPGIDVLALATGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137384_109516901	3300012357	Vadose Zone Soil	VEQRIGQILEGALTAVTPGACASGAVVVRPPGIDVLALATGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137385_107488782	3300012359	Vadose Zone Soil	MEQGLGEVVEGALAPVTPVAFAPGAVVVRPPRIDVLALAPGTLEWAIFPPQGMDVVVTLFGVEEVVDV*
Ga0137385_108975502	3300012359	Vadose Zone Soil	EHGVGEIIEGTLAAVTPVAFASGSVVIIPPRINVMALAPGTLQGKIFPPQRMDVGLTLVGVEEV*
Ga0137361_104545521	3300012362	Vadose Zone Soil	PTLVEQGIGEVVEGALTTVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEEFVDV*
Ga0137390_105410901	3300012363	Vadose Zone Soil	AVVVFAPRIHVVALTAGALQWAIFPSRRMDVDLTLVDVEEVVDVCKHRHG*
Ga0137359_104502861	3300012923	Vadose Zone Soil	MQQGLGEVVAGALATVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0137359_115248442	3300012923	Vadose Zone Soil	IGEIVESALAAVAPVAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0137404_114470581	3300012929	Vadose Zone Soil	MEQGMGEVVEGALAAVTPVAFAAGSIVVLAPWVDVWAVTPGTLEWTIFPPECMNICLALFGVEELVQMREHWHG*
Ga0137404_116710412	3300012929	Vadose Zone Soil	MHHRIGEIVESALAAVAPGAFAPRSVVVLPPRIDVLALAPGTLAGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0137407_103190383	3300012930	Vadose Zone Soil	MQQGIGQVIEGTLAAVAPVTLASGAVVVRPPRIDVLALAPGTLECAIFPSQRVDGGLALIDVEELVEVREHWHG*
Ga0137407_111883482	3300012930	Vadose Zone Soil	MHHRIGEIVEGALAAVAPVAFAPRSVVVIAPRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREHWHG*
Ga0137407_119212661	3300012930	Vadose Zone Soil	LAAVTPVAFAAGAVVVLPPGIDVLALASGTLEGPIFPSQRMNVGLTLVDVEELVDVCKHRHG*
Ga0137407_122355372	3300012930	Vadose Zone Soil	ERPFALMQQGIGEIIEGALATVAPVAFAAGAIMVRPPRIDVLALAPGTLERTLFPSQCMDVGLTLFDVEELVDVREHRHG*
Ga0126375_111880141	3300012948	Tropical Forest Soil	VEQGLGEVVEGALATVTPVSFTPGAIVVLPPRIDILALAPRTLERTIFPPERVDVSLTVFGVEEVVDI*
Ga0126375_112544212	3300012948	Tropical Forest Soil	VEQGVGKVIEGAFAAVTPVAFTAGAVVVRPPRINVLALAPGTLKGTLFPPQRMDIGVTLIDVEEVVEVREHWHE*
Ga0126375_118069531	3300012948	Tropical Forest Soil	VQQGIGEVIEGALAPVAPVAFAAGAVVILPPRINVLALAPGTLEGAIFPPERMDVGVTLSDVEEVVDVRGHGHG*
Ga0164300_105600011	3300012951	Soil	MEQGIGEVVEGALAAVTPVAFAAGSIVVLAPRVDVWAVTPGTLEWTIFPPECMNICLALFGVEELVQMREHWHG*
Ga0126369_101254722	3300012971	Tropical Forest Soil	MNSIEGALAAVTPVAFASGTVAIHPPRIDVLALAPGTLEGPLFPPERMDIDVAAIGVEEVVDV*
Ga0126369_119269831	3300012971	Tropical Forest Soil	LALVEQSIGEVVEGALAPIAPVAFAPGAVVVRTPRIDVLALAPGALEEPIFPPQRMDVGLTLVDVEELVDV*
Ga0157375_106820622	3300013308	Miscanthus Rhizosphere	EQGVGQVIEGAFAAVKPVAFGAGAVVVCPPRINVLALAPGTLKGPLFPPQRMDVGVTVFGVEELVDV*
Ga0182001_104663541	3300014488	Soil	MGEVVEGAVAAVAPVAQTPGSIVVRPPRIDVLALASGTLEWAIFPPQRMDIGVTLVDVEALVDVGEDRHG*
Ga0157379_101405971	3300014968	Switchgrass Rhizosphere	VEQGVGQVIEGAFAAVKPVAFGAGAVVVCPPRINVLALAPGTLKGPLFPPQRMDVGVTVFGVEELVDV*
Ga0137405_12341201	3300015053	Vadose Zone Soil	QNPVRQWPLTLVEQGMGEVVEGALAAVTPVTFTPGSIVVIPPRIDVLALAPRTLEWTIFPPQRMNVNLTLVDVEELVDV*
Ga0132255_1029632431	3300015374	Arabidopsis Rhizosphere	AVTPVAFASRAVVVRAPWIDVLALAPGTLEGAIFPPQCMDIALTLVNVEELVDIREHRHE
Ga0182039_119688642	3300016422	Soil	MSEIVEGALAAITPVALTPGAIVVRPPGIDVVTLAPGTLEGTIFPPQRMDVRLALFEAEELVDIGKRRHR
Ga0207665_100920881	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VRERPFALMQQGIGEIIEGALATVAPVAFAAGAIMVRPPRIDVLALAAGTLEGLLFPSQRVDVGMTLIGVEELVEVREHWHG
Ga0209481_105192021	3300027880	Populus Rhizosphere	MGEVIEGALATVTPVPFTAGSIVILPPRIHIPALAPGTLEGTIFPPQRMDVGPTLVDVEGLVDV
Ga0308199_11210292	3300031094	Soil	MSVGEVMKGAVAAVAPVAFAPGSVVVRAPRIDILALTPGTLERPIFPPQRMEGGLTLADVAEVVDV
Ga0308194_103657441	3300031421	Soil	MGEVVEGAFAAIAPGAFTPGSIVIRPPRIDVLALAPGTLERAFFPPERMDVGLTLFGVEELVNV
Ga0310913_106122262	3300031945	Soil	MSEVVEGALAAVTPVPFTPGSIVVIPPRIDVLALAPGTLEGAIFPPQRMDVDLAGFYTEQLETVARVPGCP
Ga0310903_102558362	3300032000	Soil	VEQGIGEVVKGALATVTPVPFTSGAIVVRPPRINILALAPGTLEGTIFPPQRMDIGLTLG
Ga0310890_103286081	3300032075	Soil	VEQGIGEVVKGALATVTPVPFTSGAIVVRPPRINILALAPGTLEGTIFPPQRMDVSLTLVDVEELVDI
Ga0307471_1031395612	3300032180	Hardwood Forest Soil	ETQQKRRQNPVRQRPLALMHHRIGEIVESALAAVAPGAFAPRSVVVRPPRIDVLALAAGTLEGLLFPSQRVDVGMTLIGVEELVEVREHWHG
Ga0307472_1001225501	3300032205	Hardwood Forest Soil	TPVEQGRGEVVEGALAAVTPGAFTPGAIVVRPPRIDVLTLAPGTLERPIFPPQRMDVGLTLVDIEELVKV
Ga0306920_1028747852	3300032261	Soil	EIVEGALAAITPVALTPGAIVVRPPGIDVVTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078464

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences