Metagenome / Metatranscriptome Family F078463

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078463
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	72 residues
Representative Sequence	MSLSDPVMAALIGASATVLAALVQLRLSWRKELKERERGQPITKKTRRGPVIVVFALMIAAAVGGFALS
Number of Associated Samples	102
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.28 %
% of genes from short scaffolds (< 2000 bps)	94.83 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.138 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (34.483 % of family members)
Environment Ontology (ENVO)	Unclassified (51.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (40.517 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.79% β-sheet: 0.00% Coil/Unstructured: 40.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF03401	TctC	8.62
PF04909	Amidohydro_2	6.90
PF07452	CHRD	5.17
PF13847	Methyltransf_31	5.17
PF00909	Ammonium_transp	4.31
PF07995	GSDH	3.45
PF00691	OmpA	3.45
PF08241	Methyltransf_11	2.59
PF08818	DUF1801	2.59
PF03950	tRNA-synt_1c_C	1.72
PF02894	GFO_IDH_MocA_C	1.72
PF01408	GFO_IDH_MocA	0.86
PF10415	FumaraseC_C	0.86
PF03795	YCII	0.86
PF00378	ECH_1	0.86
PF00462	Glutaredoxin	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	8.62
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	4.31
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	3.45
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	2.59
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	2.59
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	2.59
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.72
COG0673	Predicted dehydrogenase	General function prediction only [R]	1.72
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.14 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.14 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.14 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.10 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	43.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.45 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	37.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.45 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	37.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.45 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	37.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.45 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.72 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	37.93 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.72 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	37.93 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.72 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.86 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	37.93 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.72 %
Streptomyces sp. CNS654	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNS654	0.86 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Unclassified	root	N/A	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004013\|Ga0055465_10075767	All Organisms → cellular organisms → Bacteria → Proteobacteria	962	Open in IMG/M
3300005172\|Ga0066683_10320186	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300005180\|Ga0066685_11135175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	509	Open in IMG/M
3300005181\|Ga0066678_10942579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	562	Open in IMG/M
3300005183\|Ga0068993_10197173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	699	Open in IMG/M
3300005444\|Ga0070694_100996798	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005451\|Ga0066681_10150457	All Organisms → cellular organisms → Bacteria → Proteobacteria	1368	Open in IMG/M
3300005529\|Ga0070741_11388519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNS654	584	Open in IMG/M
3300005546\|Ga0070696_101518691	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300005555\|Ga0066692_10668674	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005557\|Ga0066704_10602479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	706	Open in IMG/M
3300005764\|Ga0066903_108520842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	523	Open in IMG/M
3300005833\|Ga0074472_11422506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300006796\|Ga0066665_11439420	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300007255\|Ga0099791_10514931	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009012\|Ga0066710_100577800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1703	Open in IMG/M
3300009038\|Ga0099829_10827202	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300009038\|Ga0099829_11791636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	502	Open in IMG/M
3300009137\|Ga0066709_103081317	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300009609\|Ga0105347_1334549	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300009609\|Ga0105347_1345609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	633	Open in IMG/M
3300010320\|Ga0134109_10340411	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010323\|Ga0134086_10058496	All Organisms → cellular organisms → Bacteria → Proteobacteria	1317	Open in IMG/M
3300010329\|Ga0134111_10502200	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300010333\|Ga0134080_10039894	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1817	Open in IMG/M
3300010359\|Ga0126376_11530146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	697	Open in IMG/M
3300010360\|Ga0126372_12693020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	549	Open in IMG/M
3300010362\|Ga0126377_11140855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	849	Open in IMG/M
3300010366\|Ga0126379_13369426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	535	Open in IMG/M
3300011397\|Ga0137444_1064421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	573	Open in IMG/M
3300011407\|Ga0137450_1050527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	761	Open in IMG/M
3300011413\|Ga0137333_1122413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	601	Open in IMG/M
3300011413\|Ga0137333_1141539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	552	Open in IMG/M
3300011416\|Ga0137422_1043221	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300011419\|Ga0137446_1013870	All Organisms → cellular organisms → Bacteria → Proteobacteria	1573	Open in IMG/M
3300011421\|Ga0137462_1028348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1135	Open in IMG/M
3300011422\|Ga0137425_1008941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1988	Open in IMG/M
3300011433\|Ga0137443_1230556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	552	Open in IMG/M
3300011435\|Ga0137426_1018269	All Organisms → cellular organisms → Bacteria → Proteobacteria	1681	Open in IMG/M
3300011435\|Ga0137426_1159688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	665	Open in IMG/M
3300011436\|Ga0137458_1088099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	878	Open in IMG/M
3300011441\|Ga0137452_1012243	All Organisms → cellular organisms → Bacteria	2613	Open in IMG/M
3300011441\|Ga0137452_1177613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	720	Open in IMG/M
3300011443\|Ga0137457_1279399	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300012039\|Ga0137421_1100795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	831	Open in IMG/M
3300012133\|Ga0137329_1029660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	682	Open in IMG/M
3300012133\|Ga0137329_1048614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	553	Open in IMG/M
3300012134\|Ga0137330_1025435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	738	Open in IMG/M
3300012137\|Ga0137346_1008590	All Organisms → cellular organisms → Bacteria → Proteobacteria	1070	Open in IMG/M
3300012159\|Ga0137344_1043786	All Organisms → cellular organisms → Bacteria → Proteobacteria	783	Open in IMG/M
3300012167\|Ga0137319_1043239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	903	Open in IMG/M
3300012168\|Ga0137357_1084489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	653	Open in IMG/M
3300012179\|Ga0137334_1024328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1204	Open in IMG/M
3300012203\|Ga0137399_10621521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	909	Open in IMG/M
3300012211\|Ga0137377_10826548	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300012225\|Ga0137434_1010994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1047	Open in IMG/M
3300012285\|Ga0137370_10795962	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012357\|Ga0137384_10870406	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300012362\|Ga0137361_10688850	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300012532\|Ga0137373_10345130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1170	Open in IMG/M
3300012683\|Ga0137398_10433025	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300012917\|Ga0137395_10716675	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012925\|Ga0137419_11140797	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300012971\|Ga0126369_13392159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	522	Open in IMG/M
3300014318\|Ga0075351_1187614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	517	Open in IMG/M
3300014321\|Ga0075353_1022438	All Organisms → cellular organisms → Bacteria → Proteobacteria	1155	Open in IMG/M
3300014870\|Ga0180080_1046642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	707	Open in IMG/M
3300014872\|Ga0180087_1059146	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300014872\|Ga0180087_1093711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	576	Open in IMG/M
3300014873\|Ga0180066_1033277	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300014874\|Ga0180084_1005943	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300014875\|Ga0180083_1071249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	738	Open in IMG/M
3300014876\|Ga0180064_1134329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	525	Open in IMG/M
3300014878\|Ga0180065_1017959	All Organisms → cellular organisms → Bacteria → Proteobacteria	1424	Open in IMG/M
3300014878\|Ga0180065_1035607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1044	Open in IMG/M
3300014878\|Ga0180065_1135095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	567	Open in IMG/M
3300014879\|Ga0180062_1133140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	571	Open in IMG/M
3300014882\|Ga0180069_1134877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	600	Open in IMG/M
3300015245\|Ga0137409_10104968	All Organisms → cellular organisms → Bacteria → Proteobacteria	2618	Open in IMG/M
3300015255\|Ga0180077_1016129	All Organisms → cellular organisms → Bacteria → Proteobacteria	1302	Open in IMG/M
3300017939\|Ga0187775_10507381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	515	Open in IMG/M
3300018063\|Ga0184637_10598815	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300018071\|Ga0184618_10094989	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300018074\|Ga0184640_10024309	All Organisms → cellular organisms → Bacteria → Proteobacteria	2348	Open in IMG/M
3300018074\|Ga0184640_10276168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	763	Open in IMG/M
3300021080\|Ga0210382_10558415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300021081\|Ga0210379_10022820	All Organisms → cellular organisms → Bacteria	2380	Open in IMG/M
3300021086\|Ga0179596_10384346	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300021086\|Ga0179596_10529923	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300021090\|Ga0210377_10427222	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300021859\|Ga0210334_10668994	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300025558\|Ga0210139_1056890	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300025985\|Ga0210117_1064606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	627	Open in IMG/M
3300026016\|Ga0208779_1024234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	571	Open in IMG/M
3300026053\|Ga0208422_1027361	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300026329\|Ga0209375_1307196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	518	Open in IMG/M
3300026333\|Ga0209158_1182978	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300026497\|Ga0257164_1038118	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300026528\|Ga0209378_1205246	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300026528\|Ga0209378_1287307	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300026532\|Ga0209160_1073892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1829	Open in IMG/M
3300027655\|Ga0209388_1033879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1466	Open in IMG/M
3300027882\|Ga0209590_10970324	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300028784\|Ga0307282_10143345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1129	Open in IMG/M
3300028792\|Ga0307504_10255347	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300032180\|Ga0307471_103840334	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300033811\|Ga0364924_042101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	959	Open in IMG/M
3300034147\|Ga0364925_0028212	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300034149\|Ga0364929_0076503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1037	Open in IMG/M
3300034149\|Ga0364929_0321025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	532	Open in IMG/M
3300034151\|Ga0364935_0097278	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300034164\|Ga0364940_0159329	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300034165\|Ga0364942_0052591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1307	Open in IMG/M
3300034176\|Ga0364931_0001057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5714	Open in IMG/M
3300034176\|Ga0364931_0088418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	972	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.31%
Aquatic	Environmental → Aquatic	45.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.55%
Sediment	Environmental → Aquatic → Sediment	38.79%
Floodplain	Environmental → Terrestrial → Floodplain	7.76%
Marine	Environmental → Aquatic → Marine	4.31%
Freshwater	Environmental → Aquatic → Freshwater	2.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	38.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	7.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.17%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.59%
Loam	Environmental → Terrestrial → Soil → Loam	2.59%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	38.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.07%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	7.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.72%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	34.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.34%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	7.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.31%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.45%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.45%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.86%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011397	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT319_2	Environmental	Open in IMG/M
3300011407	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012133	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT121_2	Environmental	Open in IMG/M
3300012134	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT142_2	Environmental	Open in IMG/M
3300012137	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT560_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012168	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT860_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015255	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025985	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026016	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026053	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055465_100757671	3300004013	Natural And Restored Wetlands	MDFSDPVTAALIGAAATVLTALVQLRYSWRRELKDRERGQPITKKTRRGPVIAVFVLLIAAAAGGFLLSQYVMSLLDEDRESLRAEVKS
Ga0066683_103201861	3300005172	Soil	MNFSESIMAALIAAGATVLAALVQLRMSWRRELKERERGQPITKKARRGPVLFVFALMI
Ga0066685_111351751	3300005180	Soil	MDFSHLSEPLMASMVGALATVAAALVQLRISWRKEMKERERGQPITKKTRRGPVIVVFALLAAAAVGGFALSQYFVSLRE
Ga0066678_109425791	3300005181	Soil	MDFPSVSEPLTGALIGALATVAAALVQLRISWRREMKERERGQPITKKTRRGPVIVVFALLAAAAVGGFALSQYFVSLRE
Ga0068993_101971732	3300005183	Natural And Restored Wetlands	MNLSDPVVAALIIASGTVLTALVQLRISWRKELRERERGQPITKKTRRGPVLFIFALLIAAGVGG
Ga0070694_1009967981	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MDFSHLSEPLMASMIGALATVAAALVQLRISWRKEMKERERGQPITKKTRRGPVIVVFALLAAAAV
Ga0066681_101504573	3300005451	Soil	MDFSHLSEPLMASMVGALATVAAALVQLRISWRKEMKERERGQPITKKTRRGPVIVVFALLIAAAVGGF
Ga0070741_113885191	3300005529	Surface Soil	MILGMNLSDSLLAAFIGAGATVMGALVQLRISWRKEMRERDRGQPVSKKQRRGPVLLVFALMIASAVGGFALSQYLNSLRYADQDAIRA
Ga0070696_1015186912	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNLSDPAIMAALIGATATVLAALVQLRLSWRKEIKERERGQPITKKARRGPVIFVVALVIAAAVGGFAFSQYLMSLLE
Ga0066692_106686742	3300005555	Soil	MDFSHLSEPLMASMIGALATVAAALVQLRISWRREIRERERGQPITKKTRRGPVIFIFVLAAAAAVGG
Ga0066704_106024792	3300005557	Soil	MDFSHLSEPLMASMIGALATVAAALVQLRISWRREIRERERGQPITKKTRRGPVTFIFVLALAAAVGGFALSQYFVSLREGDRDTLRA
Ga0066903_1085208422	3300005764	Tropical Forest Soil	MNFSEPITAALIAASATVATALVQLRISWRKEIKERERGQPITKKTRRGPVLAVLALMIAAAVGGFSLSQYLMSL
Ga0074472_114225061	3300005833	Sediment (Intertidal)	MNWSDPVVAAVIGASATVMTALVQLRLSWRKELKERERGQPISRKTRRGPVLLVFALMIASAVGGFALSQYLMT
Ga0066665_114394201	3300006796	Soil	MNFSESIMAALIAAGATVLAALVQLRMSWRRELKERERGQPITKKARRGPVLFVFALMIAAAVGGFAL
Ga0099791_105149312	3300007255	Vadose Zone Soil	MDFSHLSEPLMASMIGALATVAAALVQLRISWRREIRERERGQPITKKTRRGPVTFIFVLALAAAVGGFAL
Ga0066710_1005778003	3300009012	Grasslands Soil	MNFSESIMAALIAAGATVLAALVQLRMSWRRELKERERGQPITKKTRRGPVLFVFALMIAAA
Ga0099829_108272022	3300009038	Vadose Zone Soil	MNFSESIMAALIAAGATVLTALVQLRMHWRRELKERERGQPITKKTRRGPVLFVFALMIAAAVGGFALS
Ga0099829_117916361	3300009038	Vadose Zone Soil	MDFPNVSEPLTAALIGALATVAGALVQLRISWRREMKERERGQPITKKTRRGPVIVVFALLAAAAVGGFA
Ga0066709_1030813172	3300009137	Grasslands Soil	MNFSESIMAALIAAGATVLAALVQLRMSWRRELKERERGQPITKKARRGPVLLVFALMVAAAVGGFALSQYFL
Ga0105347_13345491	3300009609	Soil	MNLPDAVLAAVIGAAATVLAALVQLSLSWRKEIKERERGQPITKKARRGPVMLVFALAIAAAVGGFALSQYLM
Ga0105347_13456091	3300009609	Soil	MEMTLSDPVMAALIGASATMLGALVQLRLSWRKELKERERGQPITKKTRRGPVIFVFALM
Ga0134109_103404111	3300010320	Grasslands Soil	MDFPNLSEPITAAMIGALATVAGALVQLRMSWRREMKERERGQPITKKARRGPVIVVFALLVAAAVG
Ga0134086_100584963	3300010323	Grasslands Soil	MDFSHLSEPLMASMIGALATVAAALVQLRISWRKEIKERERGQPITKKTRRGPVIVVFALLAAAAVG
Ga0134111_105022001	3300010329	Grasslands Soil	MNFSESIMAALIAAGATVLAALVQLRMSWRKELKERERGQPITKTARRGPVLFVFALMIAAAVGGFALSQY
Ga0134080_100398943	3300010333	Grasslands Soil	MNFSESIMAALIAAGATVLAALVQLRMSWRKELKERERGQPITKKTRRGPVLFVFALMIAAAVGGFALSQYF
Ga0126376_115301462	3300010359	Tropical Forest Soil	MDFSKLSEPVIAAMIGAMATVVTALIQLRISWKKELRERERGQPITKKSRRGPVMVVFALLIAA
Ga0126372_126930201	3300010360	Tropical Forest Soil	MDFSHPSDALVAAGIGALATVITALIQLRISWRKELRERERGQPITKKSRRGPVMVVFALLIAAGVGGFAL
Ga0126377_111408551	3300010362	Tropical Forest Soil	MDFSKFSEPVIAAMIGAMATVVTALIQLRISWRKELRERERGQPITKKSRRGPVMVVFALLIAAGVGGFALSQYFVSLQTTS
Ga0126379_133694261	3300010366	Tropical Forest Soil	MDFSHPSDSLIAALVGALATVVTALIQLRISWRKELRERERGQPITKKSRRGPVVVVFALMIAAAVGGFALSQY
Ga0137444_10644211	3300011397	Soil	MDFPNVSEPLTAALIGALATVAAALVQLRISWRREMKERERGQPITKKTRRGPVIFIFVLVMAAAVGGFALSQYFVSLREGDR
Ga0137450_10505271	3300011407	Soil	MSLSDPVMAALIGASATMLGALLQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVG
Ga0137333_11224131	3300011413	Soil	MEMNLSDPVMAALIGASATMLGALIQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALSEYFMSLRNGD
Ga0137333_11415391	3300011413	Soil	MNLSDPIVAAFIAAGATVLATLVQLRISWRKELRERERGQPITKKTRRGPVMVVFALMIAAAVGGFALSQY
Ga0137422_10432212	3300011416	Soil	MNLSDPIMASLIAAGATVLATLVQLRISWRKELRERERGQPITKKTRRGPVTVVFLLMIAAAVGGFALSQYF
Ga0137446_10138701	3300011419	Soil	MEMNLSDPVMAALIGASATMLGALIQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALSEYF
Ga0137462_10283482	3300011421	Soil	MNLSDPVMAALIGASATMLGALIQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFAL
Ga0137425_10089411	3300011422	Soil	MDMSLSDPVMAALIGASATMLGALLQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFAL
Ga0137443_12305562	3300011433	Soil	MDINLSDPVMAALIGALATVLGALVQLRLSWRKELKERERGQPITKKTRRGPVIFVFALM
Ga0137426_10182691	3300011435	Soil	MDFPNVSEPLTAALIGALATVAAALVQLRISWRREMKERERGQPITKKTRRGPVIFIFVLVMAAAVGGFALSQYFVSLRE
Ga0137426_11596882	3300011435	Soil	MNLSDPVMAALIGASATMLGALIQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALS
Ga0137458_10880991	3300011436	Soil	MSLSDPVMAALIGASATMLGALLQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALSEYFMSLRNGDR
Ga0137452_10122431	3300011441	Soil	MNLSDPVMAALIGASATALGALVQLRLSWRKELKERERGQPITKKTRRGPVIVVFALMIAAAVGGFALS
Ga0137452_11776131	3300011441	Soil	MSLSDPVMAALIGASATVLAALVQLRLSWRKELKERERGQPITKKTRRGPVIVVFALMIAAAVGGFALS
Ga0137457_12793992	3300011443	Soil	MEMNLSDPVMAALIGASATMLGALIQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALS
Ga0137421_11007952	3300012039	Soil	MSLSDPVMAALIGASATVLAALVQLRLSWRKELKERERGQPITKKTRRGPVIVVFALMIAAAVGGFALSEYFMTLRNGDR
Ga0137329_10296602	3300012133	Soil	MNISDPLMAALIGASATVLAALVQLRLSWRNELKERERGQPITKKARRGPVIVVFALMIAAAVGGFALSEYFMTL
Ga0137329_10486141	3300012133	Soil	MDFSDPITASLIGASATVLTALVQLRYSWRRELKDRERGQPITKKTRRGPFMAVFVLMIAAAAGGFFLSQYVISLRYEDRDTL
Ga0137330_10254352	3300012134	Soil	YHPPMDFPNLSEPLTAALIGALATVAAALVQLRISWRREMKERERGQPITKKTRRGPVIFIFVLVMAAAVGGFALSQYFV*
Ga0137346_10085901	3300012137	Soil	MDFPNVSEPLTAALIGALATVAAALVQLRISWRREMKERERGQPITKKTRRGPVIFIFVLVMAA
Ga0137344_10437861	3300012159	Soil	MNLSDPVMAALIGASATALGALVQLRLSWRKELKERERGQPITKKTRRGPVIVVFALMIAAAVGGYALSEYFMSLRNG
Ga0137319_10432392	3300012167	Soil	MNLSDPVMAALIGASATMLGALIQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALSEYFMSLRNGD
Ga0137357_10844892	3300012168	Soil	MNISDPLMAALIGASATVLAALVQLRLSWRNELKERERGQPITKKARRGPVIVVFALMIAAAVGGFALSEYFMTLRN
Ga0137334_10243283	3300012179	Soil	MNISDPLMAALIGASATVLAALVQLRLSWRNELKERERGQPITKKARRGPVIVVFALMIAAAVG
Ga0137399_106215211	3300012203	Vadose Zone Soil	MDFPNVSEPLTAALIGALATVAGALVQLRISWRREMKERERGQPITKKTRRGPVIVVFALLVAA
Ga0137377_108265481	3300012211	Vadose Zone Soil	MNFSESIMAALIAAGATVLAALVQLRMSWRRELKERERGQPITKKARRGPVLFVFALMIAAAVGGFALSQYFLSLRNGDRDTL
Ga0137434_10109942	3300012225	Soil	MDFSDPITAALIGASATVLTALVQLRYSWRRELKDRERGQPITKKTRRGPFMAVFVLMIAAAAGGFFLSQYVISLRYEDRDTLRA*
Ga0137370_107959621	3300012285	Vadose Zone Soil	MDFSHLSEPLMASMVGALATVAAALVQLRISWRKEMKERERGQPITKKTRRGPVIVVFALLAAAAVGGFALSQYFVSLR
Ga0137384_108704062	3300012357	Vadose Zone Soil	MNFSESIMAALIAAGATVLAALVQLRMSWRRELKERERGQPITKKARRGPVLFVFALMIAAAVGGFALSQYFLSLRDGDRDT
Ga0137361_106888502	3300012362	Vadose Zone Soil	MNFSESIMAALIAAGATVLTALVQLRMSWRRELKERERGQPITKKTRRGPVLFVFALMIAAAVGGFALSQYFLSLRNGDRDALR
Ga0137373_103451302	3300012532	Vadose Zone Soil	MDFPNISEPLTAAMIGALATVAAALVQLRISWRRELKERERGQPITKKTRRGPVIFVFILVVAAAVG
Ga0137398_104330252	3300012683	Vadose Zone Soil	MDFSHLSEPLMASMIGALATVAAALVQLRISWRREIRERERGQPITKKTRRGPVIFIFVLAAAAAVGGFALSQYFVSLRE
Ga0137395_107166751	3300012917	Vadose Zone Soil	MNFSDSIMAALIAAGATMLTALVQLRMHWRRELKERERGQPITKKTRRGPVLFVFALMVAAAVGGFALSQ
Ga0137419_111407971	3300012925	Vadose Zone Soil	MDFSHVSEPVFAAMIGAMATVITALVQLRLSWRKEMKERERAQPITKKSRRGPVIAVLALMIAAAVGG
Ga0126369_133921591	3300012971	Tropical Forest Soil	MDFSHPSDSLIAAFIGALATVAAALVQLRISWRKELRERERGQPITKKTRRGPVLVVFALMTAAAVGGFALSQYF
Ga0075351_11876142	3300014318	Natural And Restored Wetlands	MNISDPAISAALIGASGTVLTALVQLRLSWRRELKERERGQPITKKTRRGPVIAVLVLMIAAAVGGF
Ga0075353_10224381	3300014321	Natural And Restored Wetlands	MDMSLSDPVMAALIGASATVLAALVQLRLSWRNELKERERGQPITKKTRRGPVIIVFALMIAAAVGGFALSEYFMSLRDGDRDTLR
Ga0180080_10466421	3300014870	Soil	MNLSDPIVASLIAAGATVLATLVQLRISWRKEMRERERGQPITKKTRRGPVTIVLALMIAAAVGGFA
Ga0180087_10591462	3300014872	Soil	MAAMIGASATVLGALVQLRLSWRKELKERERGQPITERTRRGPVIVVFALMIAAAVGGFA
Ga0180087_10937111	3300014872	Soil	MDMSLSDPVMAALIGASATMLGALLQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALSEYFISLRN
Ga0180066_10332772	3300014873	Soil	MNISDPLMAALIGASATVLAALVQLRLSWRNELKERERGQPITKKARRGPVIVVFALMIAAAVGGFALSEYFMTLRNGDRD
Ga0180084_10059431	3300014874	Soil	MDMNLSDPVVAALIGASATVLGALVQLRLSWRKELKERERGQPITRKTRRGPVIMVFALMIAAAVGGFALSEYFMDLRN
Ga0180083_10712491	3300014875	Soil	MSLSDPIMAALIGASATVLATLVQLRLSWRKELKERERGQPITRKTRRGPVIVVFALM
Ga0180064_11343292	3300014876	Soil	MAAMIGASATVLGALVQLRLSWRKELKERERGQPITKKTRRGPVIVVFALMIAAAVGGFALSEYFMSLRNGDRDTLRA
Ga0180065_10179593	3300014878	Soil	MNLSDPIMAALIAAGATVLATLVQLRISWRKELRERERGQPITKKTRRGPVTIVFLMMIA
Ga0180065_10356071	3300014878	Soil	MDFSDPITAALIGASATVLTALVQLRYSWRRELKDRERGQPITKKTRRGPFMAVFVLMIAAAAGGFFLSQYVISLRYEDRDTLRA
Ga0180065_11350952	3300014878	Soil	MDFSDPITASLIGASATVLTALVQLRYSWRRELKDRERGQPITKKTRRGPFMAVFVLMIAAAAGGFFLSQYVISLRYEDRDTLRA
Ga0180062_11331401	3300014879	Soil	MEMNLSDPVMAALIGASATMLGALIQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALSEYFMSLRNGDRDTMRA
Ga0180069_11348771	3300014882	Soil	MDMSLSDPVMAALIGASATMLGALLQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALSEYFM
Ga0137409_101049684	3300015245	Vadose Zone Soil	MDFEHLSEPVLAAMIGAGATALTALVQLRLSWRKELKERERGQPITKKSRRGPVIAVLALMIAAAVGG
Ga0180077_10161291	3300015255	Soil	MSLSDPVMAALIGASATMLGALLQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALSEYFISL
Ga0187775_105073811	3300017939	Tropical Peatland	MDFSHLSEPVVAAMIGATATVITALVQLRMSWRKELRERERAQPITKKSRRGPVFFVFALMIAAAVGGFALSQ
Ga0187777_110377101	3300017974	Tropical Peatland	MDFSHPSDSLIAALVGALATVVTALIQLRISWRKELRERERGQPITKKSRRGPVLVVFAL
Ga0184637_105988151	3300018063	Groundwater Sediment	MNYSDPVIIAAIIGASATVLTALVQLRVSWRKELRERERGQPITKKTRRGPVIAVVVLMLAAGVGGFALS
Ga0184618_100949891	3300018071	Groundwater Sediment	MNFSESIMAALIAAGATVLAALVQLRMSWRRELKERERGQPITKKTRRGPVLFVFALMIGAAVG
Ga0184640_100243094	3300018074	Groundwater Sediment	MNLSDSIMAALIAAGATMLTALVQLRMSWRKELKERERGQPITKKTRRGPVLFVFALLI
Ga0184640_102761682	3300018074	Groundwater Sediment	MYLSDSIMAALIAAGATVLATLVQLRISWRKELRERERGQPITKKARRGPVTFVVVLMIAAAVGGFALS
Ga0210382_105584151	3300021080	Groundwater Sediment	MNFSESIMAALIAAGATVLAALVQLRMSWRRELKERERGQPITKKTRRGPVLFVFALMIAAAVGGFALSQYFLSLRNGDRDTLR
Ga0210379_100228201	3300021081	Groundwater Sediment	MNLSDPVMAALIGASATALGALVQLRLSWRKELKERERGQPITKKTRRGPVIVVFALMIAAAVGGFA
Ga0179596_103843462	3300021086	Vadose Zone Soil	MDFPSLSEPLTAALIGALATVAGALVQLRISWRREMKERERGQPITKKTRRGPVIVVFALLAAAAVGGFA
Ga0179596_105299231	3300021086	Vadose Zone Soil	MDFSHLSEPVVAAVIGATATVITALVQLRLSWRKELKERERGQPITKKSRRGPVIAVLALMIAAAVGGFALSQY
Ga0210377_104272222	3300021090	Groundwater Sediment	MDINLSDPVMAALIGALATVLGALVQLRLSWRKELKERERGQPITKKTRRGPVIVVFALMIAAAVG
Ga0210334_106689942	3300021859	Estuarine	MNLSDPVVAALIIASGTVLTSLVQLRISWRKELRERERGQPITKKTRRGPVLFIFALVIAAGVGGFALSQYFVSLRIG
Ga0210139_10568903	3300025558	Natural And Restored Wetlands	MNLSDPIVAALIIASGTVLTALVQLRMSWRKEIKERERGQPITKRTRRGPVLFVFALVIAAAVGGFALSQYFVSLRIGDR
Ga0210117_10646062	3300025985	Natural And Restored Wetlands	MDMSLSDPVMAALIGASATVLAALVQLRLSWRNELKERERGQPITKKTRRGPVIVVFALMIAAAVGGFALSEYFMSLRDGD
Ga0208779_10242341	3300026016	Natural And Restored Wetlands	MNLSDPVVAALIIASGTVLTALVQLRISWRKELRERERGQPITKKTRRGPVLFIFALFIAAGVGGFALSQYFVSL
Ga0208422_10273612	3300026053	Natural And Restored Wetlands	MDFSDPITAALIGAAATVLTALVQLRYSWRRELKDRERGQPITKKTRRGPVIAVFVLLI
Ga0209375_13071961	3300026329	Soil	MDFPNVSEPLTAALIGALATVAGALVQLRISWRREMKERERGQPITKKTRRGPVIVVFALLAAAAVGGFALSQYFV
Ga0209158_11829781	3300026333	Soil	MDFSHLSEPLMASMIGALATVAAALVQLRISWRREIRERERGQPITKKTRRGPVIFIFVLAAAAAVGGFALSQYFVSLREGDRDT
Ga0257164_10381182	3300026497	Soil	MDFPNLSEPLTAALIGALATVAGALVQLRISWRKEMKERERGQPITKKTRRGPVIVVFALLVAAGVGG
Ga0209378_12052461	3300026528	Soil	MDFPNVSEPLTAALIGALATVAGALVQLRISWRREMKERERGQPITKKTRRGPVIVVFALLAAAAVGGFALSQYFVSLREGD
Ga0209378_12873072	3300026528	Soil	MNFSESIMAALIAAGATVLAALVQLRMSWRRELKERERGQPITKKARRGPVLFVFALMIAAAVGGFALS
Ga0209160_10738921	3300026532	Soil	MDFSHLSEPLMASMIGALATVAAALVQLRISWRREIRERERGQPITKKTRRGPVTFIFVLALAAAVGGFALSQYFVSLREGDRDTLRAD
Ga0209388_10338793	3300027655	Vadose Zone Soil	MDFPSLSEPLTAALIGALATVAGALVQLRISWRREMKERERGQPITKKTRRGPVIVVFALLVAAAVG
Ga0209590_109703241	3300027882	Vadose Zone Soil	MDFSHLSEPLMASMIGALATVAAALVQLRISWRREIRERERGQPITKKTRRGPVTFIFVLALA
Ga0307282_101433451	3300028784	Soil	MDFPNVSEPLTAALIGALATVAGALVQLRISWRREMKERERGQPITKKTRRGPVIVVFALLVAAAVGGF
Ga0307504_102553472	3300028792	Soil	MDFPNISEPLTGAMIGALATVAAALVQLRISWRRELKERERGQPITKKTRRGPVIFVFVLVI
Ga0307471_1038403341	3300032180	Hardwood Forest Soil	MDFSHPSDSLIAAFVGALATVVTALIQLRMSWRRELRERERGQPITKKSRRGPVLLVLALMIAAAVGGFALSQYIIS
Ga0364924_042101_773_958	3300033811	Sediment	MDFSDPITAALIGAAATVLTALVQLRMSWRRELKDRERGQPITRKTRRGPVIAVFVLLIAAA
Ga0364925_0028212_1658_1831	3300034147	Sediment	MNLSDPVMAALIGALATVLGALVQLRLSWRKELKERERGQPITKKTRRGPVIVVFALM
Ga0364929_0076503_835_1035	3300034149	Sediment	MDMNLSDPVMAALIGALATVLGALVQLRLSWRKELKERERGQPITRKTRRGPVIMVFALMIAAAVGG
Ga0364929_0321025_2_250	3300034149	Sediment	MEMNLSDPVMAALIGASATMLGALIQLRLSWRKELKERERGQPITKKTRRGPVIFVFALMIAAAVGGFALSEYFMSLRNGDRD
Ga0364935_0097278_699_899	3300034151	Sediment	MDFSDPITAALIGASATVLTALVQLRYSWRRELKDRERGQPITKKTRRGPFMAVFVLMIAAAAGGFF
Ga0364940_0159329_1_210	3300034164	Sediment	MDFSDPITAALIGAAATVLTALVQLRMSWRRELKERERGQPITKKTRRGPVLFVFALMIAAAVGGFALSQ
Ga0364942_0052591_1098_1307	3300034165	Sediment	MNLSDPIVAAFIAAGATVLATLVQLRISWRKELRERERGQPITKKTRRGPVMVVFALMIAAAVGGFALSQ
Ga0364931_0001057_5532_5714	3300034176	Sediment	MNLSDPVMAALIGASATALGALVQLRLSWRKELKERERGQPITKKTRRGPVIVVFALMIA
Ga0364931_0088418_2_232	3300034176	Sediment	MSLSDPIMAALIGASATVLATLVQLRLSWRKELKERERGQPITRKTRRGPVIVVFALMIAAAVGGFALSEYFMSLRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078463

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences