Metagenome Family F078461

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078461
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	81 residues
Representative Sequence	STRSKISIHARPGPTVLEDLETLVRRTGLEILTVSSRQENVDLVIDLELRGSKRLHDQAMITLLHHDHVRTVSTGE
Number of Associated Samples	98
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.59 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	87.07 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.448 % of family members)
Environment Ontology (ENVO)	Unclassified (42.241 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.552 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.12% β-sheet: 34.62% Coil/Unstructured: 43.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.58.18.6: IlvH-like	d2f1fa1	2f1f	0.88111
d.58.18.0: automated matches	d2wvfa2	2wvf	0.84059
d.58.14.1: Ribosomal protein S6	d1loua_	1lou	0.82954
d.58.18.12: AF1403 N-terminal domain-like	d1y7pa2	1y7p	0.80602
d.58.14.1: Ribosomal protein S6	d2j5aa1	2j5a	0.79062

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02826	2-Hacid_dh_C	41.38
PF00437	T2SSE	6.90
PF00701	DHDPS	1.72
PF00579	tRNA-synt_1b	0.86
PF03631	Virul_fac_BrkB	0.86
PF00709	Adenylsucc_synt	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	3.45
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.86
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.86
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.86
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	90.52 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	90.52 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	50.86 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	7.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	50.00 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	7.76 %
Gemmatimonadetes bacterium 13_2_20CM_70_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9	0.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	50.00 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	7.76 %
Gemmatimonadetes bacterium 13_2_20CM_70_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9	0.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	50.00 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	2.59 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.72 %
Gemmatimonadetes bacterium 13_2_20CM_70_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9	0.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	50.00 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2.59 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.72 %
Gemmatimonadetes bacterium 13_2_20CM_70_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9	0.86 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10084077	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	980	Open in IMG/M
3300002908\|JGI25382J43887_10011799	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	4469	Open in IMG/M
3300002908\|JGI25382J43887_10225361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	881	Open in IMG/M
3300002908\|JGI25382J43887_10399823	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300004281\|Ga0066397_10085489	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	637	Open in IMG/M
3300005166\|Ga0066674_10077948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1522	Open in IMG/M
3300005175\|Ga0066673_10882326	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300005177\|Ga0066690_10413322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	915	Open in IMG/M
3300005180\|Ga0066685_10141638	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1630	Open in IMG/M
3300005181\|Ga0066678_10892265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	582	Open in IMG/M
3300005186\|Ga0066676_10147186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1478	Open in IMG/M
3300005187\|Ga0066675_10249915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1266	Open in IMG/M
3300005445\|Ga0070708_101934732	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	546	Open in IMG/M
3300005451\|Ga0066681_10084154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1798	Open in IMG/M
3300005526\|Ga0073909_10622463	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300005544\|Ga0070686_100569363	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	888	Open in IMG/M
3300005545\|Ga0070695_100343031	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1117	Open in IMG/M
3300005545\|Ga0070695_100667662	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	822	Open in IMG/M
3300005545\|Ga0070695_100969347	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	690	Open in IMG/M
3300005549\|Ga0070704_100321991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1296	Open in IMG/M
3300005558\|Ga0066698_10123577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1728	Open in IMG/M
3300005561\|Ga0066699_11256212	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300006031\|Ga0066651_10598863	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	586	Open in IMG/M
3300006032\|Ga0066696_10443659	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	849	Open in IMG/M
3300006796\|Ga0066665_11565245	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300006847\|Ga0075431_101329946	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	679	Open in IMG/M
3300006854\|Ga0075425_100625073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1238	Open in IMG/M
3300006854\|Ga0075425_101065086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	921	Open in IMG/M
3300006871\|Ga0075434_100638097	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1084	Open in IMG/M
3300006904\|Ga0075424_100043236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4696	Open in IMG/M
3300006914\|Ga0075436_100896141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	663	Open in IMG/M
3300007076\|Ga0075435_100146146	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1986	Open in IMG/M
3300007076\|Ga0075435_101731374	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300007255\|Ga0099791_10610825	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	533	Open in IMG/M
3300007265\|Ga0099794_10685038	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	545	Open in IMG/M
3300009012\|Ga0066710_101731087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	949	Open in IMG/M
3300009090\|Ga0099827_10471641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1077	Open in IMG/M
3300009090\|Ga0099827_11782853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	536	Open in IMG/M
3300009137\|Ga0066709_100893569	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1294	Open in IMG/M
3300010301\|Ga0134070_10047157	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300010301\|Ga0134070_10228816	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	690	Open in IMG/M
3300010304\|Ga0134088_10262759	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	831	Open in IMG/M
3300010320\|Ga0134109_10223020	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	703	Open in IMG/M
3300010329\|Ga0134111_10404771	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300010333\|Ga0134080_10030124	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300010333\|Ga0134080_10223721	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	822	Open in IMG/M
3300010333\|Ga0134080_10439048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	610	Open in IMG/M
3300010335\|Ga0134063_10548791	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	583	Open in IMG/M
3300011271\|Ga0137393_10413605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1155	Open in IMG/M
3300012096\|Ga0137389_11363867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	604	Open in IMG/M
3300012172\|Ga0137320_1103634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	607	Open in IMG/M
3300012173\|Ga0137327_1004027	All Organisms → cellular organisms → Bacteria	2562	Open in IMG/M
3300012200\|Ga0137382_10451667	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	909	Open in IMG/M
3300012201\|Ga0137365_10466171	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	929	Open in IMG/M
3300012202\|Ga0137363_10012421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5489	Open in IMG/M
3300012202\|Ga0137363_11348434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	602	Open in IMG/M
3300012203\|Ga0137399_11076722	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	677	Open in IMG/M
3300012204\|Ga0137374_10152855	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300012208\|Ga0137376_10704431	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	871	Open in IMG/M
3300012208\|Ga0137376_11333674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	608	Open in IMG/M
3300012209\|Ga0137379_10733757	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	893	Open in IMG/M
3300012210\|Ga0137378_11677966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9	542	Open in IMG/M
3300012349\|Ga0137387_10775409	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	694	Open in IMG/M
3300012349\|Ga0137387_11111841	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	562	Open in IMG/M
3300012357\|Ga0137384_11454318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	534	Open in IMG/M
3300012359\|Ga0137385_10157547	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300012582\|Ga0137358_10737945	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	658	Open in IMG/M
3300012918\|Ga0137396_10179740	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1550	Open in IMG/M
3300012922\|Ga0137394_11112755	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	654	Open in IMG/M
3300012925\|Ga0137419_10135610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1759	Open in IMG/M
3300012927\|Ga0137416_11012589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	742	Open in IMG/M
3300012927\|Ga0137416_12125063	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	516	Open in IMG/M
3300012929\|Ga0137404_10993403	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	768	Open in IMG/M
3300012930\|Ga0137407_10666359	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	979	Open in IMG/M
3300012944\|Ga0137410_10905898	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	746	Open in IMG/M
3300012972\|Ga0134077_10118663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1037	Open in IMG/M
3300013297\|Ga0157378_10225369	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1784	Open in IMG/M
3300014154\|Ga0134075_10446263	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	575	Open in IMG/M
3300014157\|Ga0134078_10323614	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	670	Open in IMG/M
3300014166\|Ga0134079_10516379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	579	Open in IMG/M
3300014166\|Ga0134079_10744597	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300015054\|Ga0137420_1403209	All Organisms → cellular organisms → Bacteria	5335	Open in IMG/M
3300015359\|Ga0134085_10178778	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	908	Open in IMG/M
3300015371\|Ga0132258_10014956	All Organisms → cellular organisms → Bacteria	16557	Open in IMG/M
3300017656\|Ga0134112_10110477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1038	Open in IMG/M
3300017657\|Ga0134074_1019625	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2224	Open in IMG/M
3300017659\|Ga0134083_10100516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1139	Open in IMG/M
3300018053\|Ga0184626_10047469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1794	Open in IMG/M
3300018084\|Ga0184629_10500213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	633	Open in IMG/M
3300018468\|Ga0066662_11705220	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300018468\|Ga0066662_12068097	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	597	Open in IMG/M
3300018482\|Ga0066669_12182743	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	525	Open in IMG/M
3300019882\|Ga0193713_1013546	All Organisms → cellular organisms → Bacteria	2456	Open in IMG/M
3300025910\|Ga0207684_10314390	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1350	Open in IMG/M
3300025917\|Ga0207660_10543944	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	944	Open in IMG/M
3300026277\|Ga0209350_1146112	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	532	Open in IMG/M
3300026285\|Ga0209438_1104950	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	843	Open in IMG/M
3300026314\|Ga0209268_1180363	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300026317\|Ga0209154_1041884	All Organisms → cellular organisms → Bacteria	2066	Open in IMG/M
3300026324\|Ga0209470_1033132	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300026324\|Ga0209470_1162266	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	976	Open in IMG/M
3300026523\|Ga0209808_1267434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300026536\|Ga0209058_1041028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2730	Open in IMG/M
3300026540\|Ga0209376_1302554	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	629	Open in IMG/M
3300026542\|Ga0209805_1304892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	604	Open in IMG/M
3300027573\|Ga0208454_1010647	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2311	Open in IMG/M
3300027646\|Ga0209466_1063252	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	747	Open in IMG/M
3300027846\|Ga0209180_10174386	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1240	Open in IMG/M
3300027882\|Ga0209590_10159794	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1403	Open in IMG/M
3300028536\|Ga0137415_11144059	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300028719\|Ga0307301_10225076	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M
3300031226\|Ga0307497_10232201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	815	Open in IMG/M
3300032180\|Ga0307471_100119532	All Organisms → cellular organisms → Bacteria	2450	Open in IMG/M
3300032180\|Ga0307471_101922703	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M
3300032205\|Ga0307472_102460915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	529	Open in IMG/M
3300033407\|Ga0214472_10477326	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1160	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.38%
Host-Associated	Host-Associated	8.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.07%
Plants	Host-Associated → Plants	8.62%
Aquatic	Environmental → Aquatic	4.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.76%
Sediment	Environmental → Aquatic → Sediment	4.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.59%
Loam	Environmental → Terrestrial → Soil → Loam	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.72%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.17%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100840771	3300002558	Grasslands Soil	IVLAVLAGLGRVEKLVERHSMRSTISIHARPGPTVLEDLEIAVRRXGLXILTVSNRQENVDLVIDFELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
JGI25382J43887_100117996	3300002908	Grasslands Soil	GYYAEALATTLVVLVVLQGLGRVEIVVERQSTRSKISIHARPGPTVLEDLETMVRRTGLEILTVSSRQENVDLVIDLELRGSKRLHDQAMITLLHHDHVRTVSTGE*
JGI25382J43887_102253611	3300002908	Grasslands Soil	EDLEGLVRRAGLEVSAVASRQENVDLVIDFDLRGSKRLHDQLMITLLHHDHVRTVSTGE*
JGI25382J43887_103998231	3300002908	Grasslands Soil	AGLGRVEKLVERQSTRATISIHARPGPTVLEDLEGLVRRAGLDILSVSSRQENVDLVIDLDMRGSRRLHDQVMITLLHHDHVRTVSTGE*
Ga0066397_100854891	3300004281	Tropical Forest Soil	TITIRAKPGPAVVEDLETLVRRTGLELISISNRQEDVDLVIELELRGSKRLYDQAIVTLLHHNSVRTVSTGE*
Ga0066674_100779481	3300005166	Soil	PTVLEDLEGLVRRAGLEISAVSSRQENVDLVIDFNIRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0066673_108823261	3300005175	Soil	ARPGPTVVEDLETLVRRTGLDVLTVSNRQENVDLVIDFELRGSKRLYDQAVVTLLHHDHVRTVSTGE*
Ga0066690_104133222	3300005177	Soil	VLAGLGRVEKLVERQSMRSTITVHAHPGPTVLEDLEGLVRRAGLEVSAVASRQENVDLVIDFDLRGSKRLHDQLMITLLHHDHVRTVSTGE*
Ga0066685_101416381	3300005180	Soil	RVEKLVERQSTRSTISIHARPGPTVLEDLESLVRRAGLEVNAVSSRQENVDLVIDFDLRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0066678_108922652	3300005181	Soil	MRSTITIHARPGPTVLEDLETLVRRTGLDVLTVSNRQENVDLVIDFELRGSKRLYDHAVVTLLHHNHVRTVSTGE*
Ga0066676_101471863	3300005186	Soil	STRSKISIHARPGPTVLEDLETLVRRTGLEILTVSSRQENVDLVIDLELRGSKRLHDQAMITLLHHDHVRTVSTGE*
Ga0066675_102499152	3300005187	Soil	GLGRIEKIVQSHSMRSTITVHAHTGPTVLEDLETLVRRSGLDVLTVSNRQENVDLVIDFELRGSKRLYDQAVITLLHHNHVRTVSTGE*
Ga0070708_1019347321	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	AVIVVLAGLGRVEKIVQGRSMRSTLTIHAHPGPTVVEDLETLVRRTGLDLISISNRQENVDLVIELELRGSKRLYDQAIVTLLHHNHVRTVSTGE*
Ga0066681_100841541	3300005451	Soil	ERQATRSTITIHAHPGPTVLEDLEGLVRRAGLEISAVSSRQENVDLVIDFNIRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0073909_106224632	3300005526	Surface Soil	MRSTITVHARQGPSVVEDLETLVRRTGLELVSISHRQENVDIVIEMELRGSKRLYDQAVVTLLHHNHVRTVSTGE*
Ga0070686_1005693632	3300005544	Switchgrass Rhizosphere	ITVHARPGPTVLEDLESLVRRAGLDVTGVASREENVDLVIDFDIRGSKRLHDQLMITLLHHNSVRTVSTGE*
Ga0070695_1003430312	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	EKLVERQSMRRTITVHARPGPTVLEDLESLVRRAGLDVTGVASREENVDLVIDFDIRGSKRLHDQLMITLLHHNSVRTVSTGE*
Ga0070695_1006676622	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	RSTISVHARPGPTVVEDLETAVRRMGLEILSVSNRQENVDLVIDFDLRGSKRLYDQAIITLLHHDHVRTVSTGE*
Ga0070695_1009693472	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	DLETAVRRMGLDILKVANRQENVDLVIDFELRGSKRLYDQAMITLLHHDHVRTVSTGE*
Ga0070704_1003219911	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	TVVEDLETAVRRMGLDILKVANRQENVDLVIDFELRGSKRLYDQAMITLLHHDHVRTVSTGE*
Ga0066698_101235771	3300005558	Soil	EKIVQSHSMRSTITVHAHTGPTVLEDLETLVRRSGLDVLTVSNRQENVDLVIDFELRGSKRLYDQAVITLLHHNHVRTVSTGE*
Ga0066699_112562122	3300005561	Soil	GRVEIVVERQSTRSKISVHARPGPTVLEDLETLVRRTGLEILTVASRQENVDLVIDLEMRGSKRLHDQAIITLLHHDHVRTVSTGE*
Ga0066651_105988631	3300006031	Soil	IVVERQSTRSKISVHARPGPTVLEDLETLVRRTGLQILTVTSRQENVDLVIDLEMRGSKRLHDQAIITLLHHDHVRTVSTGE*
Ga0066696_104436592	3300006032	Soil	QGLGRVEIVVERQSTKSKISVHARPGPTVLEDLETLVRRTGLQILTVASRQENVDLVIDLEMRGSKRLHDQAIITLLHHDHVRTVSTGE*
Ga0066665_115652452	3300006796	Soil	AGLGRVEKLVERHSMRSTISIHARPGPTVLEDLEIAVRRTGLEILTVSNRQENVDLVIDFELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0075431_1013299462	3300006847	Populus Rhizosphere	HARPGPKVLDDLESVVRRGGLELSGVSSRQENVDLVIDFDIRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0075425_1006250731	3300006854	Populus Rhizosphere	VERHSLTSTISIHARPGPTVVEDLETAVRRMGLDILKVANRQENVDLVIEFELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0075425_1010650861	3300006854	Populus Rhizosphere	GPTVLEDLETLVRRTGLDILTISNRQENVDLVIELELRGSKRLYDQAVVTLLHHNHVRTVSTGE*
Ga0075434_1006380972	3300006871	Populus Rhizosphere	AVIVVLAGLGRVEKIVQVRSMRSTLTIHAHPGPTVVEDLETLVRRTGLDLISISNRQENVDLVIELELRGSKRLYDQAIVTLLHHNHVRTVSTGE*
Ga0075424_1000432366	3300006904	Populus Rhizosphere	TAVRRMGLDILKVANRQENVDLVIEFELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0075436_1008961412	3300006914	Populus Rhizosphere	VVLAGLGRAEKIIQSHSMRSTVTVHAHTGPTVLEELETLVRRTGLDVVSVSNRQENVDLVIEFEIRGSKRLYDQAVITLLHHDHVRTVSTGE*
Ga0075435_1001461463	3300007076	Populus Rhizosphere	TVHAHTGPTVLEELETLVRRTGLDVVSVSNRQENVDLVIEFEIRGSKRLYDQAVITLLHHDHVRTVSTGE*
Ga0075435_1017313741	3300007076	Populus Rhizosphere	RVEKVVERHSLTSTISIHARPGPTVVEDLETAVRRMGLDILKVANRQENVDLVIEFELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0099791_106108252	3300007255	Vadose Zone Soil	ETLVRRTGLEVLTISNRQENVDIVIELELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0099794_106850381	3300007265	Vadose Zone Soil	SGYYLEGIATTVVVLAVLAGLGRVEKLVERQSTRSTISIHARPGPTVLEDLESLVRRAGLEVNAVSSRQENVDLVIDFDLRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0066710_1017310872	3300009012	Grasslands Soil	VEKLVERHSMRSTISIHARPGPTVLEDLEIAVRRTGLEILTVSNRQENVDLVIDFELRGSKRLYDQAIVTLLHHDHVRTVSTGE
Ga0099827_104716411	3300009090	Vadose Zone Soil	PTVLEDLETAVRRMGLDIVSMSNRQENVDLVIDFELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0099827_117828532	3300009090	Vadose Zone Soil	MRSTITIHARPGPTVLEDLETLVRRTGLDVLTVSNRQENVDLVIDFELRGSKRLYDQAVVTLLHHNHVRTVSTGE*
Ga0066709_1008935692	3300009137	Grasslands Soil	TSTISIHARPGPTVVADLETAVRRMGLDILKVSNRQENVDLVVEFELRGSKRLYDQAMITLLHHDHVRTVSTGE*
Ga0134070_100471571	3300010301	Grasslands Soil	TIHARPGPSVLEDLETLVRRTGLDVLTVSNRQENVDLVIDFELRGSKRLYDQAVVTLLHHNHVRTVSTGE*
Ga0134070_102288161	3300010301	Grasslands Soil	PGPTVLEDLEGLVRRAGLEVSAVSSRQENVDLVIDFDIRGSKRLHDQLMITLLHHDHVRTVSTGE*
Ga0134088_102627591	3300010304	Grasslands Soil	LEGVGTTLAVIVVLAGLGRVERIVQSHSMRSTITIHAHTGPTVLEDLETLVRRSGLEVLTVSNRQENVDLVIDFELRGSRRLYDQAVITLLHHNHVRTVSTGE*
Ga0134109_102230202	3300010320	Grasslands Soil	LSGLGRVEKIVQSHSMRSTITIHARTGPTVVEDIETLVRRTGLEILTISNRQENVDIVIELELRGSKRLYDQAVVTLLHHDHVRTVSTGE*
Ga0134111_104047712	3300010329	Grasslands Soil	TIHARPGPTVLEDLETLVRRTGLDILTISNRQENVDLVIELELRGSKRLYDQAVVTLLHHNHVRTVSTGE*
Ga0134080_100301241	3300010333	Grasslands Soil	ITVHAHAGPTVLEDLETLVRRSGLDVLTVSNRQENVDLVIDFELRGSKRLYDQAVITLLHHNHVRTVSTGE*
Ga0134080_102237212	3300010333	Grasslands Soil	GRVEKLVERQSMRSTVSVHAKPGPTVLEDLEGLVRRAGLEVSAVSSRQENVDLVIDFDIRGSKRLHDQLMITLLHHDHVRTVSTGE*
Ga0134080_104390482	3300010333	Grasslands Soil	QSHSMRSTITIHARHGPTVVEDIESLVRRTGLEILTISNRQENVDIVIELELRGSKRLYDQAVVTLLHHDHVRTVSTGE*
Ga0134063_105487911	3300010335	Grasslands Soil	LVVLVVLAGLGRVEKIVQSHSTRATLTIHARQGPTVVEDLETLVRRTGLDVVTISNRQENVDLVIELELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0137393_104136052	3300011271	Vadose Zone Soil	MRSTISIHARPGPTVLEDLEIAVRRTGLEILTVSNRQENVDLVIDFELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0137389_113638672	3300012096	Vadose Zone Soil	ERQSMRSTITVHAHPGPTVLEDLESLVRRAGLEVSAVASRQENVDLVIDFDLRGSKRLHDQLMITLLHHDHVRTVSTGE*
Ga0137320_11036341	3300012172	Soil	LESLVRRAGLEVTSVASRQENVDLVIDFAIRGSKRLHDQLMITLLHHNHVSTVSTGE*
Ga0137327_10040271	3300012173	Soil	VVLAVLSGLGRIEKLVERQAMHRTITVHARQGPTVLEDLESLVRRAGLEVTSVASRQENVDLVVDFAIRGSKRLHDQLMITLLHHDHVRTVSTGE*
Ga0137382_104516671	3300012200	Vadose Zone Soil	PTVLEDLETLVRRTGLDILTISNRQENVDLVIELELRGSKRLYDQAVVTLLHHNHVRTVSTGE*
Ga0137365_104661711	3300012201	Vadose Zone Soil	RQAMRSTITIHAHPGPTVLEDLEGLVRRAGLEVSAVASRQENVDLVIEFNIRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0137363_100124211	3300012202	Vadose Zone Soil	TRSTISIHARPGPTVLEDLESLVRRAGLEVNAVSSRQENVDLVIDFDLRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0137363_113484341	3300012202	Vadose Zone Soil	ISIHARPGPTVVEDLETAVRRTGLDILKVSNRQENVDLVVEFELRGSKRLYDQAIITLLHHDHVRTVSTGE*
Ga0137399_110767221	3300012203	Vadose Zone Soil	TVVEDLETLVRRTGLDLLTISNRQENVDLVIELELRGSKRLYDQALVTLLHHDHVRTVSTGE*
Ga0137374_101528551	3300012204	Vadose Zone Soil	EDLETAVRRTGLEIVRVSNRQENVDLVIDFELRGSKRLYDQAIITLLHHDHVRTVSTGE*
Ga0137376_107044312	3300012208	Vadose Zone Soil	LVERQSLTSTISIHARPGPTVVEDLETAVRRMGLDILKVSNRQENVDLVVEFELRGSKRLYDQAIITLLHHDHVRTVSTGE*
Ga0137376_113336742	3300012208	Vadose Zone Soil	RVETLVERQAMRSTITIHAHPGPTVLEDLEGLVRRAGLEISAVSSRQENVDLVIEFNIRGSKRLHDQVMITLVHHDHVRTVSTGE*
Ga0137379_107337572	3300012209	Vadose Zone Soil	VVLVVLAGLGRVEKIVQSHSTRATLTIHARQGPTVVEDLETLVRRTGLDVVTISNRQENVDLVIELELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0137378_116779661	3300012210	Vadose Zone Soil	AIGVALGSGYYAEALATTLVVLVVLEGLGRVEIVVERQSTRSKISIHARPGPTVLEDLETLVRRTGLEILTVASRQENVDLVIDLEMRGSKRLHDQAMITLLHHDHVRTVSTGE*
Ga0137387_107754092	3300012349	Vadose Zone Soil	VLAVLAGLGRVEKLVERQSMRSTVSVHAKPGPTVLEDLEGLVRRAGLEVSAVSSRQENVDLVIDFDIRGSKRLHDQLMITLLHHDHVRTVSTGE*
Ga0137387_111118411	3300012349	Vadose Zone Soil	GLGRVEKLVERQSLTSTISIHARPGPTVVEDLETAVRRMGLDILKVSNRQENVDLVVEFELRGSKRLYDQAIITLLHHDHVRTVSTGE*
Ga0137384_114543181	3300012357	Vadose Zone Soil	QSMRSTVSVHAKPGPTVLEDLEGLVRRAGLEVSAVSSRQENVDLVIDFDIRGSKRLHDQLMITLLHHDHVRTVSTGE*
Ga0137385_101575473	3300012359	Vadose Zone Soil	GTTLAVILVLAGLGRVEKIVQSHSMRSTITIHARPGPTVLEDLETLVRRTGLDVLTVSNRQENVDLVIDFELRGSKRLYDQAVVTLLHHNHVRTVSTGE*
Ga0137358_107379452	3300012582	Vadose Zone Soil	EGIATTLVVLVVLAGLGRGEKLVELHSMRSRVTIHAHPGPTVLDDLETLVRRAGLEISAVSSRQENVDLVIDFDVRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0137396_101797403	3300012918	Vadose Zone Soil	AGLGRVEKLVGRQSLTSTISIHARPGPTVVEDLETAVRRMGLDILKVSNRQENVDLVVEFELRGSKRLYDQAIITLLHHDHVRTVSTGE*
Ga0137394_111127551	3300012922	Vadose Zone Soil	STITVHARQGPTVVEDLETLMRRTGLELISISNRQENVDLVIEMELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0137419_101356101	3300012925	Vadose Zone Soil	GIATTLVVLVVLAGLGRVETLVERQAMRSTITIHAHPGPTVLEDLEALVRRAGLEISAVSSRQENVDLVIEFNIRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0137416_110125892	3300012927	Vadose Zone Soil	IAIHARPGPTVLEDLETLVRRTGLEIMTIASRQENVDLVIDLEIRGSKRLHDQAIITLLHHDQVRTVSTGE*
Ga0137416_121250631	3300012927	Vadose Zone Soil	LAGLGRVEKLVQRQSMRSTITIHAHPGPTVLEDLETLVRRAGLEVSAVSSRQENVDLVIDLDIRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0137404_109934032	3300012929	Vadose Zone Soil	SLTSTISIHARPGPTVVEDLETAVRRMGLDILKVSNRQENVDLVVDFELRGSKRLYDQAMITLLHHDHVRTVSTGE*
Ga0137407_106663591	3300012930	Vadose Zone Soil	LVVLAVLAGLGRVEKLVERQSMRSTVSVHARPGPTVLEDLEGLVRRAGLEVTAVSSRQENVDLVIDFDIRGSKRLHDQLMITLLHHDHVRTVSTGE*
Ga0137410_109058982	3300012944	Vadose Zone Soil	VQSHSMRSTLTIHARPGPTVVEDLETLVRRTGLDLLTISNRQENVDLVIELELRGSKRLYDQAIVTLLHHDHVRTVSTGE*
Ga0134077_101186631	3300012972	Grasslands Soil	LATTLVVLVVLQGLGRVEIVVERQSTRSKISIHARPGPTVLEDLETLVRRTGLEILTVSSRQENVDLVIDLELRGSKRLHDQAMITLLHHDHVRTVSTGE*
Ga0157378_102253693	3300013297	Miscanthus Rhizosphere	GRIEKLVERQSMRRTITVHARPGPTVLEDLESLVRRAGLDVTGVASREENVDLVIDFDIRGSKRLHDQLMITLLHHNSVRTVSTGE*
Ga0134075_104462632	3300014154	Grasslands Soil	GLGRVEKLVERQSTRSTISIHARPGPTVLEDLESLVRRAGLEVNAVSSRQENVDLVIDFDLRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0134078_103236142	3300014157	Grasslands Soil	HAHTGPTVLEDLETLVRRSGLDVLTVSNRQENVDLVIDFELRGSKRLYDQAVITLLHHNHVRTVSTGE*
Ga0134079_105163791	3300014166	Grasslands Soil	IHARPGPTVVEDLETAVRRMGLDILKVSNRQENVDLVVEFELRGSKRLYDQAIITLLHHDHVRTVSTGE*
Ga0134079_107445972	3300014166	Grasslands Soil	VLEDLETLVRRTGLDVLTISNRQENVDLVIELELRGSKRLYDQAVVTLLHHNHVRTVSTGE*
Ga0137420_14032098	3300015054	Vadose Zone Soil	VLEDLEGLVRRAGLEVSSVSSRQENVDLVIDFDLRGSKRLHDQVMITLLHHDHVRTVSTGE*
Ga0134085_101787782	3300015359	Grasslands Soil	ALGSGYYAEALATTLVVLVVLQGLGRVEIVVERQSTRSKISIHARPGPTVLEDLETLVRRTGLEILTVSSRQENVDLVIDLELRGSKRLHDQAMITLLHHDHVRTVSTGE*
Ga0132258_100149561	3300015371	Arabidopsis Rhizosphere	AGLGRIEKLVERQSLRRTITVHARPGPTVLEDLESLVRRAGLDVTGVASREENVDLVIDFDIRGSKRLHDQLMITLLHHNHVRTVSTGE*
Ga0134112_101104771	3300017656	Grasslands Soil	PGLGRLEKLVQRQSMRSTITIHAHPGPTVLEDLESLVRRAGLEVNAVSSRQENVDLVIDFDLRGSKRLHDQVMVTLLHHNHVRTVSTGE
Ga0134074_10196251	3300017657	Grasslands Soil	PGPTVLEDLEGLVRRAGLEVSAVASRQENVDLVIEFNIRGSKRLHDQVMITLLHHDHVRTVSTGE
Ga0134083_101005161	3300017659	Grasslands Soil	LVRRTGLDIVTISNRQENVDLVIELELRGSKRLYDQAVVTLLHHNHVRTVSTGE
Ga0184626_100474693	3300018053	Groundwater Sediment	EKLVGRQSMHSRVTIHARPGPTVLEDLEGLVRRAGLELSAVSSRQENVDLVIDFDIRGSKRLHDQVIITLLRHDHVRTVSTGE
Ga0184629_105002131	3300018084	Groundwater Sediment	LEGVGTTVIILAVLAGLGRVEKLVERQSTRTRITIHARPGPTVLEDLEGVVRRAGLELSAVSSRQENVDLVIDFDIRGSKRLHDQVMITLLHHDHVRTVSTGE
Ga0066662_117052201	3300018468	Grasslands Soil	ATMLVVLVVLQGLGSVEIVVERQSTRSKISIHARPGPTVLEDLETLVRRTGLEILTIASRQENVDLVIDLEMRGSKRLHDQAMITLLHHDHVRTVSTGE
Ga0066662_120680971	3300018468	Grasslands Soil	TVLEDLETLVRRTGLEILTVASRQENVDLVIDLEMRGSKRLHDQAMITLLHHDHVRTVSTGE
Ga0066669_121827431	3300018482	Grasslands Soil	TLVVLIVLQGLGRVEIVVERQSTRSKISVHARPGPTVLEDLETLVRRTGLQILTVASRQENVDLVIDLEMRGSKRLHDQAIITLLHHDHVRTVSTGE
Ga0193713_10135463	3300019882	Soil	LAGLGRVEKIVQGRSMRSTLTIHAHPGPTVVEDLETLVRRTGLDLISISNRQENIDLVIELELRGSKRLYDQAIVTLLHHNHVRTVSTGE
Ga0207684_103143901	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GTTGAVIVVLAGLGRVEKIVQGRSMRSTLTIHAHPGPTVVEDLETLVRRTGLDLISISNRQENVDLVIELELRGSKRLYDQAIVTLLHHNHVRTVSTGE
Ga0207660_105439441	3300025917	Corn Rhizosphere	VRSGLGRAEKLIQRHSMRSTITVHARQGPSVVEDLETLVRRTGLELVSISNRQENVDLVIEMELRGSKRLYDQAVVTLLHHNHVRTVSTGE
Ga0209350_11461121	3300026277	Grasslands Soil	ETLVRRTGLEILTVASRQENVDLVIDLEMRGSKRLHDQAMITLLHHDHVRTVSTGE
Ga0209438_11049502	3300026285	Grasslands Soil	MRSTITVHARQGPTVVEDLETLMRRTGLELISISNRQENVDLVIEMELRGSKRLYDQAIVTLLHHDHVRTVSTGE
Ga0209268_11803631	3300026314	Soil	GRVEKLVERQSLTSTISIHARPGPTVVEDLEIAVRRMGLDILKVSNRQENVDLVVEFELRGSKRLYDQAIITLLHHDHVRTVSTGE
Ga0209154_10418841	3300026317	Soil	EGVGTTLVVLVVLAGLGRMEKIVQSHSLRSTITIHARPGPTVLEDLETLVRRTGLDVLTISNRQENVDLVIELELRGSKRLYDQAVVTLLHHNHVRTVSTGE
Ga0209470_10331324	3300026324	Soil	DIESLVRRTGLEILTISNRQENVDIVIELELRGSKRLYDQAVVTLLHHDHVRTVSTGE
Ga0209470_11622661	3300026324	Soil	LGRVEIVVERQSTRSKISIHARPGPTVLEDLETLVRRTGLEILTVSSRQENVDLVIDLELRGSKRLHDQAMITLLHHDHVRTVSTGE
Ga0209808_12674342	3300026523	Soil	ARPGPTVLEDLETLVRRTGLQILTVASRQENVDLVIDLEMRGSKRLHDQAIITLLHHDHVRTVSTGE
Ga0209058_10410281	3300026536	Soil	VGTTLAVIIVLAGLGRIEKIVQSHSMRSTITVHAHTGPTVLEDLETLVRRSGLDVLTVSNRQENVDLVIDFELRGSKRLYDQAVITLLHHNHVRTVSTGE
Ga0209376_13025542	3300026540	Soil	GVGTTLAVIIVLAGLGRIEKIVQSHSMRSTITVHAHTGPTVLEDLETLVRRSGLDVLTVSNRQENVDLVIDFELRGSKRLYDQAVITLLHHNHVRTVSTGE
Ga0209805_13048921	3300026542	Soil	GLGRVEIVVERQSTKSKISVHARPGPTVLEDLETLVRRTGLQILTVASRQENVDLVIDLEMRGSKRLHDQAIITLLHHDHVRTVSTGE
Ga0208454_10106471	3300027573	Soil	VLAVLAGLGRAEKLVQRQSMRSTINVHARQGPTVLEDLETLVRRAGVEVIGVSSRQENVDLVIEFDIRGSKRLHDQLMITLLHHDHVRTVSTGE
Ga0209466_10632522	3300027646	Tropical Forest Soil	TITIRAKPGPAVVEDLETLVRRTGLELISISNRQEDVDLVIELELRGSKRLYDQAIVTLLHHNSVRTVSTGE
Ga0209180_101743862	3300027846	Vadose Zone Soil	VLAVLAGLGRVETLVERQSTRSTISIHARPGPTVLEDLESLVRRAGLEVNAVSSRQENVDLVIDFDLRGSKRLHDQVMITLLHHDHVRTVSTGE
Ga0209590_101597943	3300027882	Vadose Zone Soil	PGPTVLEDLETAVRRMGLDIVSMSNRQVNVDLVIDFELRGSKRLYDQAIVTLLHHDHVRTVSTGE
Ga0137415_111440591	3300028536	Vadose Zone Soil	SHSMRSTITIHARPGPSVLEDLETAVRRTGLEILTVVNRQENVDLVIEFELRGSKRLYDQAIVTLLHHDLVRTVSTGE
Ga0307301_102250762	3300028719	Soil	IHAHPGPTVVEDLETLVRRTGLDLISISNRQENIDLVIELELRGSKRLYDQAIVTLLHHNHVRTVSTGE
Ga0307497_102322011	3300031226	Soil	MRSTITIHARHGPTVVEDIESLVRRTGLEVLTISNRQENVDIVIELELRGSKRLYDQAVVTLLHHDHVRTVSTGE
Ga0307471_1001195323	3300032180	Hardwood Forest Soil	LSGLGRAEKLVQRQSMRSTINVHARQGHTVLEDLETLVRRAGLEVIGVSSRQENVDLVIEFDIRGSKRLHDQVMITLLHHDHVRTVSTGE
Ga0307471_1019227032	3300032180	Hardwood Forest Soil	VVLSGLGRAEKLVQRQSMRSTITIHARQGPSVVEDLETLVRRTGLELISISNRQENVDLVIELELRGSKRLYNQAIVTLLHHNHVRTVSTGE
Ga0307472_1024609152	3300032205	Hardwood Forest Soil	VLAVLAGLGRVEKLVERQSMRSTITVHAHPGPTVLEDLESLVRRAGLEVSAVASRQENVDLVIDFDLRGSKRLHDQLMITLLHHDHVRTVSTGE
Ga0214472_104773261	3300033407	Soil	IERWSTRSRITIHARPGPTVIEELETVVRRAGVEILQQASRQENVDLVLEFELRGPKRLHDEVMIGLLHHDKVRTVSTGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078461

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences