Metagenome Family F078446

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F078446
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	43 residues
Representative Sequence	MLTYSTLQDRPREFLAATGLTHDEFARVLPAFAAAYAVLYPPD
Number of Associated Samples	82
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.97 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	91.38 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (89.655 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (32.759 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.241 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.25% β-sheet: 0.00% Coil/Unstructured: 57.75%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13613	HTH_Tnp_4	3.45
PF13359	DDE_Tnp_4	2.59
PF13551	HTH_29	1.72
PF10049	DUF2283	0.86
PF03061	4HBT	0.86
PF03328	HpcH_HpaI	0.86
PF01381	HTH_3	0.86
PF13655	RVT_N	0.86
PF13176	TPR_7	0.86
PF04909	Amidohydro_2	0.86
PF01261	AP_endonuc_2	0.86
PF00296	Bac_luciferase	0.86
PF03100	CcmE	0.86
PF01526	DDE_Tnp_Tn3	0.86
PF01799	Fer2_2	0.86
PF13358	DDE_3	0.86
PF01610	DDE_Tnp_ISL3	0.86
PF08241	Methyltransf_11	0.86
PF01548	DEDD_Tnp_IS110	0.86
PF02012	BNR	0.86
PF00202	Aminotran_3	0.86
PF13340	DUF4096	0.86
PF00483	NTP_transferase	0.86
PF02899	Phage_int_SAM_1	0.86
PF12867	DinB_2	0.86
PF03466	LysR_substrate	0.86
PF01844	HNH	0.86
PF13495	Phage_int_SAM_4	0.86
PF02163	Peptidase_M50	0.86
PF02585	PIG-L	0.86
PF00929	RNase_T	0.86
PF08843	AbiEii	0.86
PF00106	adh_short	0.86
PF04255	DUF433	0.86
PF04984	Phage_sheath_1	0.86
PF14226	DIOX_N	0.86
PF00583	Acetyltransf_1	0.86
PF12695	Abhydrolase_5	0.86
PF07228	SpoIIE	0.86
PF13610	DDE_Tnp_IS240	0.86
PF14104	DUF4277	0.86
PF00528	BPD_transp_1	0.86
PF01656	CbiA	0.86
PF00535	Glycos_transf_2	0.86
PF13565	HTH_32	0.86
PF01609	DDE_Tnp_1	0.86
PF07978	NIPSNAP	0.86
PF04986	Y2_Tnp	0.86
PF08309	LVIVD	0.86
PF08388	GIIM	0.86
PF08450	SGL	0.86
PF00211	Guanylate_cyc	0.86
PF13714	PEP_mutase	0.86
PF00589	Phage_integrase	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.86
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.86
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.86
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.86
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.86
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.86
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.86
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.86
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.86
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.86
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.86
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.86
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.86
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.86
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.86
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.86
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.86
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.86
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.86
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.86
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.86
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.86
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.66 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.66 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.66 %
Unclassified	root	N/A	10.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.31 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	3.45 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.45 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.59 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.86 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.34 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	6.03 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	3.45 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %
Chlamydiae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae	0.86 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.34 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	6.03 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	3.45 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.59 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	2.59 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.72 %
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	0.86 %
Chlamydiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.34 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	3.45 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	2.59 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.72 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.72 %
Parachlamydiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales	0.86 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.86 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	0.86 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.86 %
Spirochaetaceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.34 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	3.45 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.59 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.72 %
Candidatus Poribacteria bacterium WGA-4C	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium WGA-4C	0.86 %
Parachlamydiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Parachlamydiaceae	0.86 %
unclassified Spirochaetaceae	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → unclassified Spirochaetaceae	0.86 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.86 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.34 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	3.45 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.59 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.72 %
Spirochaetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → unclassified Spirochaetaceae → Spirochaetaceae bacterium	0.86 %
Candidatus Poribacteria bacterium WGA-4C	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium WGA-4C	0.86 %
Parachlamydiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Parachlamydiaceae	0.86 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.86 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10829867	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300000443\|F12B_12045490	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300000955\|JGI1027J12803_106533481	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300004463\|Ga0063356_106493731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	501	Open in IMG/M
3300004633\|Ga0066395_10387537	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005184\|Ga0066671_10326456	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005187\|Ga0066675_11441280	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium WGA-4C	504	Open in IMG/M
3300005289\|Ga0065704_10750493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	542	Open in IMG/M
3300005289\|Ga0065704_10854002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	508	Open in IMG/M
3300005294\|Ga0065705_10238780	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300005295\|Ga0065707_10027871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	962	Open in IMG/M
3300005295\|Ga0065707_10627156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	674	Open in IMG/M
3300005332\|Ga0066388_100948312	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1432	Open in IMG/M
3300005332\|Ga0066388_101077046	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300005332\|Ga0066388_103325492	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005332\|Ga0066388_106878883	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005332\|Ga0066388_107342611	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005332\|Ga0066388_107891356	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005445\|Ga0070708_101560376	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005764\|Ga0066903_101828737	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300005764\|Ga0066903_102354652	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005983\|Ga0081540_1084139	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300006797\|Ga0066659_11328726	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300006844\|Ga0075428_100006238	All Organisms → cellular organisms → Bacteria	13256	Open in IMG/M
3300006844\|Ga0075428_101995162	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300006845\|Ga0075421_100312418	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300006845\|Ga0075421_100374175	All Organisms → cellular organisms → Bacteria	1716	Open in IMG/M
3300006845\|Ga0075421_100457448	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300006845\|Ga0075421_100775321	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300006846\|Ga0075430_100035101	All Organisms → cellular organisms → Bacteria	4256	Open in IMG/M
3300006847\|Ga0075431_100312063	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300006852\|Ga0075433_11875237	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006880\|Ga0075429_100827660	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300009012\|Ga0066710_100360249	Not Available	2154	Open in IMG/M
3300009012\|Ga0066710_102215744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	802	Open in IMG/M
3300009090\|Ga0099827_10007108	All Organisms → cellular organisms → Bacteria	6927	Open in IMG/M
3300009090\|Ga0099827_10055558	All Organisms → cellular organisms → Bacteria	2997	Open in IMG/M
3300009090\|Ga0099827_10456863	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300009090\|Ga0099827_10869223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	781	Open in IMG/M
3300009090\|Ga0099827_10939552	Not Available	749	Open in IMG/M
3300009090\|Ga0099827_11692422	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300009131\|Ga0115027_11536769	Not Available	547	Open in IMG/M
3300009691\|Ga0114944_1039580	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300009691\|Ga0114944_1349193	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300009815\|Ga0105070_1104525	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010043\|Ga0126380_10922564	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	728	Open in IMG/M
3300010046\|Ga0126384_10663114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	920	Open in IMG/M
3300010047\|Ga0126382_12453850	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300010047\|Ga0126382_12538476	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300010358\|Ga0126370_10480537	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1044	Open in IMG/M
3300010360\|Ga0126372_10742530	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	964	Open in IMG/M
3300010360\|Ga0126372_11676095	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300010371\|Ga0134125_11108309	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300010398\|Ga0126383_10231269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1799	Open in IMG/M
3300012189\|Ga0137388_10527071	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300012189\|Ga0137388_10751033	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → unclassified Spirochaetaceae → Spirochaetaceae bacterium	905	Open in IMG/M
3300012189\|Ga0137388_11574313	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300012189\|Ga0137388_11609558	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300012207\|Ga0137381_10933312	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300012211\|Ga0137377_10357182	Not Available	1398	Open in IMG/M
3300012349\|Ga0137387_11225454	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300012351\|Ga0137386_10158666	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300012353\|Ga0137367_10666594	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300012360\|Ga0137375_10862818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	722	Open in IMG/M
3300012361\|Ga0137360_10180899	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300012362\|Ga0137361_10384666	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300012362\|Ga0137361_11737260	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012363\|Ga0137390_10240990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1794	Open in IMG/M
3300012495\|Ga0157323_1042227	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300012499\|Ga0157350_1059197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	505	Open in IMG/M
3300012918\|Ga0137396_10055259	Not Available	2734	Open in IMG/M
3300012918\|Ga0137396_10255457	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300012922\|Ga0137394_10801876	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300012925\|Ga0137419_11212024	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300012925\|Ga0137419_11711579	Not Available	537	Open in IMG/M
3300012948\|Ga0126375_10863748	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Parachlamydiaceae	723	Open in IMG/M
3300012971\|Ga0126369_10142458	Not Available	2242	Open in IMG/M
3300012971\|Ga0126369_10311954	Not Available	1579	Open in IMG/M
3300012971\|Ga0126369_10371184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1460	Open in IMG/M
3300012971\|Ga0126369_11845307	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300013092\|Ga0163199_1072176	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300016387\|Ga0182040_10388892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1091	Open in IMG/M
3300016404\|Ga0182037_11540834	Not Available	590	Open in IMG/M
3300018053\|Ga0184626_10086799	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300018053\|Ga0184626_10297395	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300018056\|Ga0184623_10423661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300018063\|Ga0184637_10691548	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	559	Open in IMG/M
3300018064\|Ga0187773_10622297	Not Available	663	Open in IMG/M
3300018075\|Ga0184632_10097076	All Organisms → cellular organisms → Bacteria → Proteobacteria	1290	Open in IMG/M
3300021073\|Ga0210378_10215269	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300026325\|Ga0209152_10494520	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300026497\|Ga0257164_1002371	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300027209\|Ga0209875_1025895	Not Available	698	Open in IMG/M
3300027273\|Ga0209886_1031098	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300027384\|Ga0209854_1036779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	826	Open in IMG/M
3300027846\|Ga0209180_10131679	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300027846\|Ga0209180_10315751	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300027903\|Ga0209488_10045794	All Organisms → cellular organisms → Bacteria	3217	Open in IMG/M
3300027903\|Ga0209488_10421110	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300027961\|Ga0209853_1013679	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300028792\|Ga0307504_10156499	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300028809\|Ga0247824_10831844	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300028811\|Ga0307292_10289769	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300028889\|Ga0247827_11215538	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031226\|Ga0307497_10682080	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031573\|Ga0310915_10745787	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300031820\|Ga0307473_10853508	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300031833\|Ga0310917_10841069	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031947\|Ga0310909_10963914	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031947\|Ga0310909_11552232	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300032002\|Ga0307416_100036196	All Organisms → cellular organisms → Bacteria	3782	Open in IMG/M
3300032041\|Ga0318549_10170086	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	974	Open in IMG/M
3300032059\|Ga0318533_11110421	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	579	Open in IMG/M
3300032075\|Ga0310890_11202730	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300032205\|Ga0307472_100943864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300032397\|Ga0315287_10934539	Not Available	1013	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.21%
Host-Associated	Host-Associated	13.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.72%
Plants	Host-Associated → Plants	13.79%
Aquatic	Environmental → Aquatic	9.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.48%
Sediment	Environmental → Aquatic → Sediment	4.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.31%
Freshwater	Environmental → Aquatic → Freshwater	3.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.07%
Loam	Environmental → Terrestrial → Soil → Loam	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.31%
Sand	Environmental → Terrestrial → Soil → Sand	4.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.72%
Lake	Environmental → Aquatic → Freshwater → Lake	1.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.31%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.31%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.59%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.86%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_108298672	3300000363	Soil	MLTYTTFQDRPREFLATTGLTHAEFARLLPAFATAYVALYPPDKTLEG
F12B_120454902	3300000443	Soil	MLTYITLQDRPREFLAATGLTHAEFVCLLPVFTAA
JGI1027J12803_1065334812	3300000955	Soil	MLTFATLQDRLREFLAATGLTHDEFARVLPAFAAAYTVLYPPD
Ga0063356_1064937312	3300004463	Arabidopsis Thaliana Rhizosphere	MLTYATLQARSREFLAATGRTHDEFARVLPAFAAAYAVR*
Ga0066395_103875371	3300004633	Tropical Forest Soil	MLTYTTLPDRPREFLAATGLTHSEFARVLPAFAAAYALRYPPDKTW
Ga0066671_103264561	3300005184	Soil	MLTYLTLQDRPREFLAATGLTHEEFARVLPAFAAAYAVLYPPDKTWEGK
Ga0066675_114412802	3300005187	Soil	MLTYTALQDRPREFLAATGLTHAEFARLLPAFATAYALLYPPEQTLEGQP
Ga0065704_107504932	3300005289	Switchgrass Rhizosphere	MLTYAILQDRPREFLAATGRTHDEFARVLPAFAAAYTVLYPPDKTWA
Ga0065704_108540021	3300005289	Switchgrass Rhizosphere	MLTYTTLQDRPREFLAATGLTHAEFAHLLPAFATAYALLYPPEKTLEGMPRQR
Ga0065705_102387801	3300005294	Switchgrass Rhizosphere	MLTYATLPARSREFLAATGLTHDEFARVLPAFAAAYAVRYPPDK
Ga0065707_100278711	3300005295	Switchgrass Rhizosphere	MLTYSTLQDRPREFLAATSLTHEEFARVLPAFAAAYAVL*
Ga0065707_106271561	3300005295	Switchgrass Rhizosphere	VLTYATLQDRPREFLPATGLTHDEFARVLPAFAAAYAVLYPPDKTWE
Ga0066388_1009483121	3300005332	Tropical Forest Soil	MRTYATLQDRSREFLAAAGLTHDELTCMWPALAAAYAMRAPPDQTWEGML
Ga0066388_1010770461	3300005332	Tropical Forest Soil	MLTYTTLQDRPREFLAATGRTHAEFAHLLPAFATAYALLYPP
Ga0066388_1033254922	3300005332	Tropical Forest Soil	MLTYATFQDRPREFLAATGLTHDEFARVLPTFAAAYAVLYPPDKTWEGK
Ga0066388_1068788832	3300005332	Tropical Forest Soil	MLTYTTLKARPREFLAATGLTHEEFLRVLPAFVTAYTACYP
Ga0066388_1073426111	3300005332	Tropical Forest Soil	VYNDRMLTYTTLHDRPREFLAATGLTHAEFVHLLPAFATAYARLYPPDKTL
Ga0066388_1078913561	3300005332	Tropical Forest Soil	MLTYTTLQARPREFLAATGLTHDEFLRVLPAFVAAYTACDPLDKTWQGQ
Ga0070708_1015603761	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLTYTTLQDRPREFLAATGLTHAEFVRLLPAFATAYALLYP
Ga0066903_1018287371	3300005764	Tropical Forest Soil	MLTYATFQDRPREFLAATGLTHDEFARALPAFAAAYAILYPPDKTWEGKAR
Ga0066903_1023546523	3300005764	Tropical Forest Soil	MLTYTTIQDRPREFLAATGLMHAEFAHLLPAFATAYALLYPPEQTL
Ga0081540_10841391	3300005983	Tabebuia Heterophylla Rhizosphere	MLTYATRQDRPREFLAATGLTHSEFARVLPAFAAAY
Ga0066659_113287262	3300006797	Soil	MLTYLTLQDRPREFLAATGLRHDEFARVLPAFAAAYTLLYPPDKTWE
Ga0075428_1000062381	3300006844	Populus Rhizosphere	MRTYTALQARPREFLAATGLTHEEFVRLLPAFLAAYAALYPSAK
Ga0075428_1019951622	3300006844	Populus Rhizosphere	MLTYATLQDRPREFLAATGLTHDEFARVLPAFAAAYAILY
Ga0075421_1003124183	3300006845	Populus Rhizosphere	MLTYSTLQDRPREFLAATGLTHDEFARVLPAFAAAYAILYPPDK
Ga0075421_1003741751	3300006845	Populus Rhizosphere	MLTYITLQDRPREFLAATGLTHAEFVCLLPAFTAAY
Ga0075421_1004574483	3300006845	Populus Rhizosphere	MLTYATLQDRPREFLAATGLTHDEFARVLPAFAAAYAIL
Ga0075421_1007753211	3300006845	Populus Rhizosphere	MLTYSTLQDRPREFLAATGLTHDEFARVLPAFAAAYAILYPPDKTW
Ga0075430_1000351014	3300006846	Populus Rhizosphere	VSEGAYAPQTRVQDRPREFLAATGLTHAEFVCLLPAFTAAYAAFYPADKTW
Ga0075431_1003120633	3300006847	Populus Rhizosphere	LTYATLQDRPREFLAATGLTHDEFTRVLPAFAAAYT*
Ga0075433_118752371	3300006852	Populus Rhizosphere	GMLTYITLQDRPREFLAATGLTHAEFVCLLPAFTAA*
Ga0075429_1008276602	3300006880	Populus Rhizosphere	MLTYATLQARSREFLAATGLTHDEFARVLPAFAAAYAVRYPPDKT
Ga0066710_1003602491	3300009012	Grasslands Soil	MLTYATLQDRPREFLAATGLTHDEFAHVLPAFAAAYAVLYPPDKTWEGKVRQR
Ga0066710_1022157443	3300009012	Grasslands Soil	MLTYLTLQDRPREFLAATGLTHDEFARVLPAFAAAYVLL
Ga0099827_100071081	3300009090	Vadose Zone Soil	MLTYPTLQDRPREFLAATGLTHDEFARVLPAFAAA
Ga0099827_100555581	3300009090	Vadose Zone Soil	MLTYSTLQDRPREVLAATGLTHDECARVLPAFAAAS
Ga0099827_104568633	3300009090	Vadose Zone Soil	MLTYTTLQDRPKEFLAATSLTPAEFARLLPAFAAAYTVL
Ga0099827_108692231	3300009090	Vadose Zone Soil	MLTYSTLQDRPREVLAATGLTHDECARVLPAFAAASA
Ga0099827_109395522	3300009090	Vadose Zone Soil	MLTYTTLQKRPREFLAATGLTHTEFARLLPAFATA
Ga0099827_116924221	3300009090	Vadose Zone Soil	MLTYSTLQDRPREFLAATGLTHDEFARVLPAFAAAYALLYPPAKTWE
Ga0115027_115367691	3300009131	Wetland	MLTYANLKDHPREFLAATGLTREEFERLLPIYGTSYAQQYPAQLTA
Ga0114944_10395801	3300009691	Thermal Springs	MLTYLTLQDRPREFLAATGLTHAEFARLLPAFATAYAVLY
Ga0114944_13491932	3300009691	Thermal Springs	MLTYTILQDRPREFLAATGLTHAAFAHLLPAFATAYA
Ga0105070_11045252	3300009815	Groundwater Sand	MLTYSTLQDRPREFLAATGRTHDEFARVLPAFAAASAVLYPPDKTW
Ga0126380_109225641	3300010043	Tropical Forest Soil	MLTYTTLNNRPRDFLAATGLTHEEFLRVLPAFVAAYTVCYPL
Ga0126384_106631141	3300010046	Tropical Forest Soil	MLTYITLQNRPREFLAATGLTHTEFARLLPAFATAYAALYPSDQT
Ga0126382_124538502	3300010047	Tropical Forest Soil	VYNYYMLIYTTLIDRPRDFIAATGLTREEFLRVLPAFVAA
Ga0126382_125384762	3300010047	Tropical Forest Soil	YYMLTYTTLKDRPREFLAATGLTHAEFMQLLPAFAAA*
Ga0126370_104805371	3300010358	Tropical Forest Soil	MLTYTTLQDRTREFLAATGLTHSEFARVLPAFAAAYALRYPPDKTWEGKAR
Ga0126372_107425301	3300010360	Tropical Forest Soil	MLTYTALQNRPREFLTVTGLAHAEFVRLLPAFVTAYVALHPSDKT
Ga0126372_116760952	3300010360	Tropical Forest Soil	MLTYATLQDRPREFLAATGLTHDEFARVLPAFAAAYA
Ga0134125_111083091	3300010371	Terrestrial Soil	MLTYITLQDRPREFLAATGLTHAEFERLLPAFTAAYAAFYP
Ga0126383_102312691	3300010398	Tropical Forest Soil	MLTYATLQDRPREFLAATGLTHDEFARVLPTFAAASAV
Ga0137388_105270712	3300012189	Vadose Zone Soil	MLTYTTLQYRSREFLAATGLTHDEFARLLPAFAAAYAVRYR*
Ga0137388_107510332	3300012189	Vadose Zone Soil	MLTYSTLQDRPREFLAATGLTHDEFARVLPAFAAASAVLSPPDKT
Ga0137388_115743132	3300012189	Vadose Zone Soil	SEIVYNFGMLTYITLQDRPREFLAATGLTHAEFVRLLPAFTAAYAAFYPLAKTW*
Ga0137388_116095581	3300012189	Vadose Zone Soil	MLTYTTLQDRPREFLAATGLTHAEFAHLLPAFATAYALLYPPEKTLEG
Ga0137381_109333122	3300012207	Vadose Zone Soil	MLTYTTLQDRPREFLAATGLTHAECAHLLPAFATASTLLY
Ga0137377_103571823	3300012211	Vadose Zone Soil	MLTYTALQDRPREFLAATGLTHAEFARLLPAFATAYALLYPPEQTLEG
Ga0137387_112254541	3300012349	Vadose Zone Soil	MLTYSTLQDRPREFLAATSLTHEEFARVLPAFAAA
Ga0137386_101586661	3300012351	Vadose Zone Soil	MLTYTTLKDRPRAFLAATGLTHAEFVLVLPACAAA
Ga0137367_106665942	3300012353	Vadose Zone Soil	MLTYTTLQDRPREFLAATGLTHAECAHLLPAFATASTLLYPRA
Ga0137375_108628182	3300012360	Vadose Zone Soil	MLTYTTLQDRPREFLAATGLRPAECAHLLPAFATASTMLYPRAKTLEGTPR
Ga0137360_101808991	3300012361	Vadose Zone Soil	MLTYATLQDRPREFLAATGLTHEEFARVLPAFAAAYAVRY
Ga0137361_103846661	3300012362	Vadose Zone Soil	MLTYSTLQDRPREFLAATGLTHEEFARVLPAFAAAYA
Ga0137361_117372601	3300012362	Vadose Zone Soil	MLTYTALQDRPREFLAATGLTHAEFARLLPAFATAYALLY
Ga0137390_102409901	3300012363	Vadose Zone Soil	MLTYTALQDRPREFLAATGLTHAEFARLLPAFATAYAL
Ga0157323_10422271	3300012495	Arabidopsis Rhizosphere	MLPYITLQDRPREFLAATGLTHAEFGRLLPAFTAAY
Ga0157350_10591971	3300012499	Unplanted Soil	MLTYTALQDRPREFLAATGLTHAEFARLLPAFATAYALLYPPEKTLEGKPRQR
Ga0137396_100552591	3300012918	Vadose Zone Soil	MLTYTTLQDRPREFLAATGLTHDEFTRLLPAFAAAYAVCYPPDKTWQG
Ga0137396_102554573	3300012918	Vadose Zone Soil	MLTYTALQDRPREFLAATRLTHAEFARLLPAFATAYALLYPPEQ
Ga0137394_108018761	3300012922	Vadose Zone Soil	MLTYSTLQDRPREFLAATGLTHDEFARVLPAFAAAS
Ga0137419_112120242	3300012925	Vadose Zone Soil	MLTYTALQDRPREFLAATGLTHAEFARLLPAFATAYALLYPPE
Ga0137419_117115792	3300012925	Vadose Zone Soil	MLTYTTLQDRPREFLAATGLTHDEFARLLPAFAAAYAVRYPSDKTWQG
Ga0126375_108637481	3300012948	Tropical Forest Soil	MLTYATLPDRPREFLAATGLTHSAWARVLPACAAASAVRSPPDK
Ga0126369_101424582	3300012971	Tropical Forest Soil	MLTYTTLPDRPREFLAATGLTHSEFARVLPAFAAAYALRYPPDKTWEGKAR
Ga0126369_103119543	3300012971	Tropical Forest Soil	MLTYTTLPDRTREFLAATGLTHSEFARVLPAFAAAYALRYPPDKTWEG
Ga0126369_103711841	3300012971	Tropical Forest Soil	MLTYATLQDRPREFLAATGLTHDEFARVLPAFAAASAVLYPPDK
Ga0126369_118453072	3300012971	Tropical Forest Soil	MLTYTTLQDRPREFLAATGLTHTEFAHLLPAFATAYALLYPPEKT
Ga0163199_10721761	3300013092	Freshwater	MLTYTTLKDNPRQFLAMTNLKLKEFETLLPAFATAYAVTQS
Ga0182040_103888922	3300016387	Soil	MLTYSTLQDRPREFLAATSLTHEEFARVLPAFAAAY
Ga0182037_115408341	3300016404	Soil	MLTYTTLQNRPREFLAATGLTHTEFARLLPAFATAYAALYPSDQTLEGKP
Ga0184626_100867991	3300018053	Groundwater Sediment	MLTYTTLQDRPREFLAATGLTHEEFVRVLPAYAAAYAVLSPPDKT
Ga0184626_102973951	3300018053	Groundwater Sediment	MLTYATLQDRPREFLAATGLTHEEFVRVLPAYAAAYAVLSPPDKT
Ga0184623_104236612	3300018056	Groundwater Sediment	MLTYATLQDRPREFLAATGLTHAEFARLLPAFAVLYP
Ga0184637_106915481	3300018063	Groundwater Sediment	MLTYITLQDRPREFLAATGLTHAEFVRLLPAFATAYALLYPSEKTAEGKP
Ga0187773_106222972	3300018064	Tropical Peatland	MLTYDSIKDRPRELLAMTGLTHEEFTRLIPAFTDAYADLYPP
Ga0184632_100970761	3300018075	Groundwater Sediment	MLTYSTLQDRPREFLAATGLTHDEFARVLPAFAAAYAVLYPPD
Ga0210378_102152691	3300021073	Groundwater Sediment	GIVYNCRMLTYATLKDRPREFLAATGLTHAEFTRLLPAFAAAYAVRYPPDKT
Ga0209152_104945201	3300026325	Soil	MLTYTALQNRPREFLAATGLTHAEFARLLPAFATAY
Ga0257164_10023712	3300026497	Soil	MLTYAALKDKAREFLAATGLTPEEFARWLPAVAAAAAAL
Ga0209875_10258952	3300027209	Groundwater Sand	MLTYTTLQDRPKEFLAATGLTLAEFARLLPAFAVSYTVLY
Ga0209886_10310983	3300027273	Groundwater Sand	MLTYTTLQNRPREFLAATGLTHAEFARLLPAFATAYAALYSS
Ga0209854_10367791	3300027384	Groundwater Sand	MLTYSTLQDRPREFLAATSLTHEEFARVLPAFAAAYAVLYPPDK
Ga0209180_101316793	3300027846	Vadose Zone Soil	MLTYTTLQDRPREFLAATGLTHAEFAHLLPAFATAYAL
Ga0209180_103157511	3300027846	Vadose Zone Soil	MVHYHRMLTYITLQDRPRALLAATGPTRVECVRLFAAFATACAAL
Ga0209488_100457944	3300027903	Vadose Zone Soil	MLTYTALQDRPREFLAATGLTHAEFARLLPAFATAY
Ga0209488_104211101	3300027903	Vadose Zone Soil	MLTYSTLQDRPREFLAATSLTHEEFARVLPAFAAAYAVLYPPDKTWE
Ga0209853_10136794	3300027961	Groundwater Sand	MLTDTTLQDRPREFLAATGLTHAEFARLLPAFATAYALLYPSE
Ga0307504_101564991	3300028792	Soil	MLTYATLQDRPREFLAATGLTHEEFARVLPAFAAAYAVRYPPDKTWEG
Ga0247824_108318441	3300028809	Soil	VYTYYMLTYTTLKDRPREFLAATGLTHDEFMRVLPA
Ga0307292_102897692	3300028811	Soil	MLTYTTLQDRPREFLAATGLTHAEFVRLLPAFATAYAR
Ga0247827_112155381	3300028889	Soil	MLTNTTLQNRPREFLAATGLTHIEFARLLPAFATAYAALYPSDQT
Ga0307497_106820801	3300031226	Soil	MLTYSTLQDRPREFLAATGLTHDEFARVLPAFAAAYV
Ga0310915_107457872	3300031573	Soil	MLTYTTLQDRPREFLAATGLMHAEFAHLLPAFATAYALLYPPEQT
Ga0307473_108535081	3300031820	Hardwood Forest Soil	MLIYATLQDRPREFLAATSLTHDEFARVLPAFAAAYAVL
Ga0310917_108410691	3300031833	Soil	MLTYTTLKDRPREFLAATGLTHDEFLRVLPAFVTAYTTCYPLDKTWQG
Ga0310909_109639142	3300031947	Soil	MTVLTYTTLQDRPREFLAATGLMHAEFAHLLPAFATAYALLYP
Ga0310909_115522321	3300031947	Soil	MLTYTTLQARPREFLAATGLMHAEFAHLLPAFATAYALLYP
Ga0307416_1000361961	3300032002	Rhizosphere	MLTYTTLKDRPREFLAATGLTHDEFMRVLPAFVTAY
Ga0318549_101700861	3300032041	Soil	MLTYTTLQDRPREFLAATGLMHAEFAHLLPAFATAYALLYPPEQTLEGKP
Ga0318533_111104212	3300032059	Soil	MLTYTTLQDRPREFLAATGLTHAEFAYLLPAFATAYALRSPPEKT
Ga0310890_112027302	3300032075	Soil	MLTYSTLQDRPREFLAATSLTHDEFARVLPAFAAAYAVLYPPDKTWEGK
Ga0307472_1009438641	3300032205	Hardwood Forest Soil	MLTYTTLQDRPRDFLAATGLTQEEFLRVLPAFVAAYTACYPLDKTWHGN
Ga0315287_109345393	3300032397	Sediment	MLTYEQLKDRPRELLAATGLTSEEFDRLLPAYQAAECKVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078446

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences