Metagenome Family F078402

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078402
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	66 residues
Representative Sequence	ESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Number of Associated Samples	71
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	43.97 %
% of genes near scaffold ends (potentially truncated)	29.31 %
% of genes from short scaffolds (< 2000 bps)	75.86 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (81.034 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (59.483 % of family members)
Environment Ontology (ENVO)	Unclassified (78.448 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (79.310 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1JGI24219J26650_10176333 2Water_1027754 3JGI25909J50240_10844711 4Ga0049083_102318591 5Ga0049080_100036804 6Ga0049080_100077641 7Ga0070749_107675932 8Ga0075464_101614873 9Ga0075464_101930154 10Ga0075464_103096111 11Ga0075464_103132913 12Ga0075464_105986901 13Ga0075464_106399951 14Ga0075473_103698711 15Ga0070747_12357162 16Ga0070745_12906272 17Ga0075458_102577563 18Ga0099846_12067762 19Ga0114364_11502563 20Ga0114973_105976032 21Ga0114973_107239341 22Ga0114962_101882245 23Ga0114962_102596022 24Ga0114962_102610752 25Ga0114962_104322621 26Ga0114980_100226455 27Ga0114980_100354231 28Ga0114980_106060712 29Ga0114980_106473692 30Ga0114980_107044572 31Ga0114968_100683204 32Ga0114968_102029942 33Ga0114968_102961972 34Ga0114968_105992771 35Ga0114968_106132512 36Ga0114968_106555212 37Ga0114968_107273572 38Ga0114977_101337313 39Ga0114977_102414981 40Ga0114978_106394842 41Ga0114981_101331443 42Ga0114966_101592722 43Ga0114966_106501051 44Ga0114970_104401633 45Ga0114970_107685551 46Ga0114975_102804383 47Ga0114969_104220521 48Ga0114974_101002346 49Ga0114974_102854521 50Ga0114974_102926244 51Ga0114974_104000833 52Ga0114976_100400551 53Ga0114976_100418586 54Ga0114976_101033233 55Ga0114971_105709511 56Ga0114972_102643362 57Ga0114964_101301232 58Ga0114964_102739542 59Ga0114967_106473851 60Ga0136644_107546582 61Ga0151517_11167 62Ga0151515_106505 63Ga0151515_1077518 64Ga0153698_133414 65Ga0164295_114895911 66Ga0181338_10029263 67Ga0181338_10449843 68Ga0181344_11534822 69Ga0181358_12079213 70Ga0181355_13009691 71Ga0211736_103923663 72Ga0222714_102336423 73Ga0222713_102623661 74Ga0222712_104590692 75Ga0214917_103236702 76Ga0214923_100677315 77Ga0208643_10463444 78Ga0208916_100252955 79Ga0208916_100501565 80Ga0208916_101049443 81Ga0208974_10014335 82Ga0208974_100564110 83Ga0209188_10060145 84Ga0209499_13178963 85Ga0209442_11568813 86Ga0209087_100123517 87Ga0209087_10478556 88Ga0209190_100101413 89Ga0209190_12428233 90Ga0209597_12102281 91Ga0209189_11108771 92Ga0209084_10188894 93Ga0209084_10731653 94Ga0209084_11478823 95Ga0209596_10377292 96Ga0209596_12056412 97Ga0209296_10344818 98Ga0209296_10875864 99Ga0209088_1000636110 100Ga0209088_100557364 101Ga0209088_102415531 102Ga0209134_100457343 103Ga0209500_104002432 104Ga0209400_10295942 105Ga0209401_11812052 106Ga0209299_10272951 107Ga0304729_10950621 108Ga0304728_11849713 109Ga0304730_10468835 110Ga0304730_11611863 111Ga0304730_13289281 112Ga0304730_13367701 113Ga0315290_107758781 114Ga0315274_108527753 115Ga0315287_118661313 116Ga0334995_0074966_503_688
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1JGI24219J26650_10176333 2Ga0049080_100036804
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1JGI24219J26650_10176333 2Ga0049080_100036804
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.97% β-sheet: 0.00% Coil/Unstructured: 18.03%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF08291	Peptidase_M15_3	7.76
PF09588	YqaJ	7.76
PF00182	Glyco_hydro_19	5.17
PF11351	GTA_holin_3TM	2.59
PF00959	Phage_lysozyme	1.72
PF04404	ERF	1.72
PF01973	MptE-like	0.86
PF13539	Peptidase_M15_4	0.86
PF05772	NinB	0.86
PF14549	P22_Cro	0.86

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COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	5.17
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	5.17
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	0.86
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	9.48 %
Unclassified	root	N/A	4.31 %
Viruses	superkingdom	All Organisms → Viruses	86.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.48 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	81.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	81.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.48 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Unclassified	root	N/A	4.31 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	81.03 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	81.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	81.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.17 %
Unclassified	root	N/A	4.31 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	81.03 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002098\|JGI24219J26650_1017633	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1010	Open in IMG/M
3300002930\|Water_102775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2955	Open in IMG/M
3300003393\|JGI25909J50240_1084471	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634	Open in IMG/M
3300005580\|Ga0049083_10231859	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	624	Open in IMG/M
3300005582\|Ga0049080_10003680	All Organisms → cellular organisms → Bacteria → Proteobacteria	5335	Open in IMG/M
3300005582\|Ga0049080_10007764	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3728	Open in IMG/M
3300006802\|Ga0070749_10767593	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	513	Open in IMG/M
3300006805\|Ga0075464_10161487	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1320	Open in IMG/M
3300006805\|Ga0075464_10193015	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1208	Open in IMG/M
3300006805\|Ga0075464_10309611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	951	Open in IMG/M

Showing 1 to 10 of 116 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	82.76%
Marine	Environmental → Aquatic → Marine	17.24%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	13.79%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.86%
Lake	Environmental → Aquatic → Freshwater → Lake	69.83%
Lentic	Environmental → Aquatic → Freshwater → Lentic	12.07%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.59%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	67.24%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.79%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	12.07%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	13.79%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.59%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	0.86%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.45%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.45%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.86%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	59.48%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	6.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.31%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.86%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.59%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M

Showing 1 to 10 of 71 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24219J26650_10176333	3300002098	Lentic	MSIAKEIYDLPEHKQIREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Water_1027754	3300002930	Estuary Water	VNLESITKEIYDLPEHRQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
JGI25909J50240_10844711	3300003393	Freshwater Lake	PEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0049083_102318591	3300005580	Freshwater Lentic	TKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0049080_100036804	3300005582	Freshwater Lentic	MEDNPNSKGIAVITESITKEIFDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0049080_100077641	3300005582	Freshwater Lentic	VEDNPNPEGIAVITESIAKEIFDLPEHKQLREDVKNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0070749_107675932	3300006802	Aqueous	VTPESITKEIYDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRQVALDLFTRKK*
Ga0075464_101614873	3300006805	Aqueous	MSIAKEIFDLPEHKQLREDVRNFIVKQEILQTIQFFPMCAQHREAKNLWRKVALDLFTRQK*
Ga0075464_101930154	3300006805	Aqueous	MSIAKEIYDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0075464_103096111	3300006805	Aqueous	MSIAKEIYDLPEHQQLRADVRNFIVKQEILQTIQNCPMYAQHREAKNLWRKVALDLFTRQK*
Ga0075464_103132913	3300006805	Aqueous	MSIAKEIYDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0075464_105986901	3300006805	Aqueous	MSITKEIYDLPEHKQLREDVKKFIVKQEILQTIQFCPMCAQHREAKNLWRKVALDLFTRQ
Ga0075464_106399951	3300006805	Aqueous	MSIAKEIYDLPEHQQLREDVKKFIVKQEILQTIHFCPRCAQHREAKNLWRKVALDLFTRQ
Ga0075473_103698711	3300006875	Aqueous	VITESITKEIFDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTR
Ga0070747_12357162	3300007276	Aqueous	MEDNPNPEGIAVITESITKEIFDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0070745_12906272	3300007344	Aqueous	VEDNPNPKGIAVITESITKEIFDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0075458_102577563	3300007363	Aqueous	MDKETDMSIAKEIYDLPEHKQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0099846_12067762	3300007542	Aqueous	VNPESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114364_11502563	3300008267	Freshwater, Plankton	MSIAKEIFDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114973_105976032	3300009068	Freshwater Lake	MSIAKEIFDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114973_107239341	3300009068	Freshwater Lake	MEDNPNPEGIAVITESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWR
Ga0114962_101882245	3300009151	Freshwater Lake	DLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRKK*
Ga0114962_102596022	3300009151	Freshwater Lake	VEDNPNSKGIAVNPVTKEIFDLPEHKQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114962_102610752	3300009151	Freshwater Lake	VTPESITKEIFDLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRQVALDLFTRKK*
Ga0114962_104322621	3300009151	Freshwater Lake	MSIAKEIFDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114980_100226455	3300009152	Freshwater Lake	MEDNPNPEGIAVNPESIAKEIFDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114980_100354231	3300009152	Freshwater Lake	NPVTKEIFDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114980_106060712	3300009152	Freshwater Lake	MDKETDMSIAKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114980_106473692	3300009152	Freshwater Lake	VEDNPNSEGIAVNPESITKEIYDLPEHQQLRADVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114980_107044572	3300009152	Freshwater Lake	MSIAKEIFNLPEHQQIREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114968_100683204	3300009155	Freshwater Lake	VEDNPNSEGIAVNPVTKEIFDLPEHKQLREDVKNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114968_102029942	3300009155	Freshwater Lake	VEDNPNSKGIAVITESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114968_102961972	3300009155	Freshwater Lake	VEDNPNSKGIAVNPVTKEIYDLPEHRQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114968_105992771	3300009155	Freshwater Lake	VEDNPNPEGIAVNPVTKEIFDLPEHKQLREDIRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114968_106132512	3300009155	Freshwater Lake	MSIAKEIFDLPEHHQIREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRK
Ga0114968_106555212	3300009155	Freshwater Lake	MSIAKEILDLPEHHQIRADVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114968_107273572	3300009155	Freshwater Lake	MSITKEIYDLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114977_101337313	3300009158	Freshwater Lake	VEDNPNSKGIAVITESITKEIYDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114977_102414981	3300009158	Freshwater Lake	MEDNPNSEGIAVNPVTKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114978_106394842	3300009159	Freshwater Lake	IFDLPEHQQLREDVRKFIVKQEILQTIHNFPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114981_101331443	3300009160	Freshwater Lake	VNPVTKEIYDLPEHRQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114966_101592722	3300009161	Freshwater Lake	MSIAKEIFDLPEHHQIREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114966_106501051	3300009161	Freshwater Lake	MSITKEIYELPEHQQLRAEVRKFIVKQEILQTIHICPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114970_104401633	3300009163	Freshwater Lake	MSITKEIYDLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ
Ga0114970_107685551	3300009163	Freshwater Lake	MENNPNPKGIVVTPESITKEIYDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDL
Ga0114975_102804383	3300009164	Freshwater Lake	VEDNPNSKGIAVITESITKEIYDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAK
Ga0114969_104220521	3300009181	Freshwater Lake	MEDNPNSEGIAMNPVTKEIYDLPEHRQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114974_101002346	3300009183	Freshwater Lake	RVEDNPNPEGIAVNPVTKEIYDLPEHQQLRADVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114974_102854521	3300009183	Freshwater Lake	VEDNPNPEGIAVNPVTKEIYDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114974_102926244	3300009183	Freshwater Lake	VITESITKEIYDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0114974_104000833	3300009183	Freshwater Lake	VEDNPNPEGIAVNPVTKEIFDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114976_100400551	3300009184	Freshwater Lake	VEDNPNSKGIAVITESITKEIYDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0114976_100418586	3300009184	Freshwater Lake	VTPESITKEIFDLPEHHQIREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114976_101033233	3300009184	Freshwater Lake	VEDNPNSKGIAVNPESITKEIFNLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114971_105709511	3300009185	Freshwater Lake	ESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114972_102643362	3300009187	Freshwater Lake	VEDNPNPEGIAVNPVTKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114964_101301232	3300010157	Freshwater Lake	MSITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0114964_102739542	3300010157	Freshwater Lake	MEDNPNPKGVAVTPESITKEIFDLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRQVALDLFTRKK*
Ga0114967_106473851	3300010160	Freshwater Lake	MENNPNPKGIVVTPESITKEIYDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRK
Ga0136644_107546582	3300010334	Freshwater Lake	VEDNPNPKGIVVNLVTKEIYDLPEHKQLREDVKKFIVKQEILQTIQNRPMCAQHREAKNLWRKVALDLFTRQK*
Ga0151517_11167	3300011113	Freshwater	MSIAKEIFNLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0151515_106505	3300011114	Freshwater	VEDNPTSKGIAVTPESITKEIYDLPEHQQLRENVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0151515_1077518	3300011114	Freshwater	MSIAKEIYDLPEHKQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0153698_133414	3300011335	Freshwater	VEDNPNSEGIAVNPVTKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0164295_114895911	3300013014	Freshwater	TESITKEIFNLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0181338_10029263	3300015050	Freshwater Lake	VEDNSNPEGIAVNPVTKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0181338_10449843	3300015050	Freshwater Lake	VEDNPNPEGIAVITESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK*
Ga0181344_11534822	3300017754	Freshwater Lake	LTIVKEIFDLPEHEQIRQDVRDFIVKKEILQTIQHCPMCAQHREAKNLWRQVALDLFTRR
Ga0181358_12079213	3300017774	Freshwater Lake	PEGIAVITESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0181355_13009691	3300017785	Freshwater Lake	PNPEGIAVITESIAKEIFDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0211736_103923663	3300020151	Freshwater	VNLESITKEIYDLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0222714_102336423	3300021961	Estuarine Water	MSIAKEIFDLPEHHQIREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ
Ga0222713_102623661	3300021962	Estuarine Water	VEDNPNPEGIAVITESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0222712_104590692	3300021963	Estuarine Water	VIIESITKEIYDLPEHKQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0214917_103236702	3300022752	Freshwater	MSIAKEIYDLPEHQQPREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ
Ga0214923_100677315	3300023179	Freshwater	MSIAKEIYDLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ
Ga0208643_10463444	3300025645	Aqueous	TKEIYDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDIFTRKK
Ga0208916_100252955	3300025896	Aqueous	MSIAKEIYDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ
Ga0208916_100501565	3300025896	Aqueous	MSIAKEIYDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ
Ga0208916_101049443	3300025896	Aqueous	VEDNPNPEGIAVITESITKEIFDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0208974_10014335	3300027608	Freshwater Lentic	MEDNPNSKGIAVITESITKEIFDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0208974_100564110	3300027608	Freshwater Lentic	VEDNPNPEGIAVITESIAKEIFDLPEHKQLREDVKNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209188_10060145	3300027708	Freshwater Lake	MSIAKEIFDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ
Ga0209499_13178963	3300027712	Freshwater Lake	KEIFDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209442_11568813	3300027732	Freshwater Lake	VEDNSNPEGIAVNPVTKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209087_100123517	3300027734	Freshwater Lake	MEDNPNSEGIAVNPVTKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209087_10478556	3300027734	Freshwater Lake	EHHQIREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209190_100101413	3300027736	Freshwater Lake	VITESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209190_12428233	3300027736	Freshwater Lake	MDKETDMSITKEIYDLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209597_12102281	3300027746	Freshwater Lake	SITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209189_11108771	3300027747	Freshwater Lake	KEIYDLPEHKQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209084_10188894	3300027749	Freshwater Lake	MEDNPNPKGVAVTPESITKEIFDLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRQVALDLFTRKK
Ga0209084_10731653	3300027749	Freshwater Lake	MSITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ
Ga0209084_11478823	3300027749	Freshwater Lake	MEDNPNSKGVAVTIESITKEIYDLPEHQQIREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRQVALDLFTRKK
Ga0209596_10377292	3300027754	Freshwater Lake	MEDNPNSEGIAMNPVTKEIYDLPEHRQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209596_12056412	3300027754	Freshwater Lake	MEDNPNPKGIAVNPVTKEIFDLPEHKQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209296_10344818	3300027759	Freshwater Lake	VEDNPNPEGIAVNPVTKEIYDLPEHQQLREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209296_10875864	3300027759	Freshwater Lake	VEDNPNPEGIAVNPVTKEIFDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209088_1000636110	3300027763	Freshwater Lake	MSIAKEIFNLPEHQQIREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ
Ga0209088_100557364	3300027763	Freshwater Lake	VEDNPNSEGIAVNPESITKEIYDLPEHQQLRADVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209088_102415531	3300027763	Freshwater Lake	MEDNPNPEGIAVNPESIAKEIFDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209134_100457343	3300027764	Freshwater Lake	MSIAKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ
Ga0209500_104002432	3300027782	Freshwater Lake	MSIAKEIFNLPEHQQIREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTR
Ga0209400_10295942	3300027963	Freshwater Lake	VNPVTKEIFDLPEHKQLREDVKNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209401_11812052	3300027971	Freshwater Lake	VEDNPNPEGIAVNPESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0209299_10272951	3300027974	Freshwater Lake	KEIFNLPEHQQIREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0304729_10950621	3300028392	Freshwater Lake	TKEIYDLPEHKQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0304728_11849713	3300028393	Freshwater Lake	VENNPNPEGIAVITESITKEIYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0304730_10468835	3300028394	Freshwater Lake	LQSQTSRRNPSKGTSMSIAKEIFDLPEHHQIREDVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0304730_11611863	3300028394	Freshwater Lake	IYDLPEHKQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0304730_13289281	3300028394	Freshwater Lake	MENNPNPKGIVVTPESITKEIYDLPEHQQLREDVRNFIVKQEILQTIQNCPMCAQHREAKNLWRKVALD
Ga0304730_13367701	3300028394	Freshwater Lake	VEDNPNSKGIAVNPVTKEIYDLPEHRQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0315290_107758781	3300031834	Sediment	VEDNPNPKGIVVNPVTKEIYDLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0315274_108527753	3300031999	Sediment	MENNPNPEGIAVNPESIAKEIFDLPEHHQIREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0315287_118661313	3300032397	Sediment	KEIYDLPEHQQLREDVKKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQK
Ga0334995_0074966_503_688	3300034062	Freshwater	MSIAKEILDLPEHHQIRADVRKFIVKQEILQTIQNCPMCAQHREAKNLWRKVALDLFTRQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078402

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences